Pregenerated sensors for SCN3B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049281

Ensembl transcript IDs: ENSMUST00000049941.12, ENSMUST00000114956.11, ENSMUST00000171835.9, ENSMUST00000176185.8, ENSMUST00000176547.2, ENSMUST00000216398.2

Found 231 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR TCA 90 bp	CCCAAGGCGGATGTCTGGCATCCACAAAGAAGGAAACGGTGTGGGTaGAAAGGGAGTTTGCCATACAAAGCCCGATGGGGGTGGAGAAGG	+
Preference number: 1 (lower is better) Translates to: PKADVWHPQRRKRCG*KGSLPYKARWGWRR Trigger: CCTTCTCCACCCCCATCGGGCTTTGTATGGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTTTGTGGATGCCAGACATCCGCCTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 90 bp	GAGTCCCAAGGCGGATGTCTGGCATCCACAAAGAAGGAAACGGTGTaGGTGAAAAGGGAGTTTGCCATACAAAGCCCGATGGGGGTGGAG	+
Preference number: 1 (lower is better) Translates to: ESQGGCLASTKKETV*VKREFAIQSPMGVE Trigger: CTCCACCCCCATCGGGCTTTGTATGGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTTTGTGGATGCCAGACATCCGCCTTGGGACTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 90 bp	TCTCTCGGCCAGTTTAATCCCCTCAATATCCTGTTCAGCCTTGTGTaGGTCTCAGATGCCTCCTGTAAAACGAGGACTAATACTGATCCA	+
Preference number: 1 (lower is better) Translates to: SLGQFNPLNILFSLV*VSDASCKTRTNTDP Trigger: TGGATCAGTATTAGTCCTCGTTTTACAGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACTGGCCGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 90 bp	TTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATaGAGACATAGCCTCGAAACACTGAGCTCCAGAATGTATTCCAGT	+
Preference number: 1 (lower is better) Translates to: LASWKFWVCSRPLGL*RHSLETLSSRMYSS Trigger: ACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CCA 90 bp	GGGAGCTACTTGATTGGAAGCAAGGATAGAGTGAGGTTTAGTCCATaGAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATA	+
Preference number: 1 (lower is better) Translates to: GSYLIGSKDRVRFSP*RDVGSSVQARSRCI Trigger: TATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTCCATGGACTAAACCTCACTCTATCCTTGCTTCCAATCAAGTAGCTCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 90 bp	ATAGAGCTCCTCAGAGTGAGGACAACTCTCTTACTGAGTCTCACTTaGATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCTATCTGT	+
Preference number: 1 (lower is better) Translates to: IELLRVRTTLLLSLT*IFLYTIRPPALAIC Trigger: ACAGATAGCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAGAGAGTTGTCCTCACTCTGAGGAGCTCTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 90 bp	CAGTACTTATCTAAAGTCATTTGGAGCACAGGGGACAACTCTAGTTaGGTTGGGAGCTACTTGATTGGAAGCAAGGATAGAGTGAGGTTT	+
Preference number: 1 (lower is better) Translates to: QYLSKVIWSTGDNSS*VGSYLIGSKDRVRF Trigger: AAACCTCACTCTATCCTTGCTTCCAATCAAGTAGCTCCCAACTCAACTAGAGTTGTCCCCTGTGCTCCAAATGACTTTAGATAAGTACTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 90 bp	AAACACATACGGAGGAAACAGGGAACGAGAGAATTATTGTGCCTTTaGTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAA	+
Preference number: 1 (lower is better) Translates to: KHIRRKQGTRELLCL*YHEQGVWFAQYSGQ Trigger: TTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTCTCGTTCCCTGTTTCCTCCGTATGTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
3UTR GCA 90 bp	CTCTCCAAACACATACGGAGGAAACAGGGAACGAGAGAATTATTGTaGCTTTGCTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCA	+
Preference number: 1 (lower is better) Translates to: LSKHIRRKQGTRELL*LCYHEQGVWFAQYS Trigger: TGAATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTCTCGTTCCCTGTTTCCTCCGTATGTGTTTGGAGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
3UTR TCA 90 bp	GTAGGCACACCAAGGTCCTGGTTACATACATTTGCATTGACTGAGTaGATTCACAGAACCAGGGCTTTCTCATTTATAAAACAAGTGAGA	+
Preference number: 1 (lower is better) Translates to: VGTPRSWLHTFALTE*IHRTRAFSFIKQVR Trigger: TCTCACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTGAATTCACTCAGTCAATGCAAATGTATGTAACCAGGACCTTGGTGTGCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 90 bp	ATGCGTAGGCACACCAAGGTCCTGGTTACATACATTTGCATTGACTaGGTGAATTCACAGAACCAGGGCTTTCTCATTTATAAAACAAGT	+
Preference number: 1 (lower is better) Translates to: MRRHTKVLVTYICID*VNSQNQGFLIYKTS Trigger: ACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTGAATTCACTCAGTCAATGCAAATGTATGTAACCAGGACCTTGGTGTGCCTACGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	GGCCTGGTGACCTGGTTAGCGAGTCTCAGATCTTCCTGTCTCTGCCTCCCCAGGCACTTCCATTGTAGATaGCAAATGCCACCCACATCC	+
Preference number: 2 (lower is better) Translates to: GLVTWLASLRSSCLCLPRHFHCR*QMPPTS Trigger: GGATGTGGGTGGCATTTGGCATCTACAATGGAAGTG...CCTGGGGAGGCAGAGACAGGAAGATCTGAGACTCGCTAACCAGGTCACCAGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
3UTR-3UTR GCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAACCTCTGCTGGACAAATaGCATGCTTCTGCCCTGCTG	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQPLLDK*HASALL Trigger: CAGCAGGGCAGAAGCATGGCATTTGTCCAGCAGAGG...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	CTTCCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGACTGGGGATAGCCAGTTaGTCAGCACTCAGCTCACCC	+
Preference number: 2 (lower is better) Translates to: LPWLLGSSGFVPGLWDYGLGIAS*SALSSP Trigger: GGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAG...TCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAAGCTATTGCCCTCAGGTaGCATGTCTCTTGGAGGATG	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQAIALR*HVSWRM Trigger: CATCCTCCAAGAGACATGGCACCTGAGGGCAATAGC...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 90 bp	ATCTCACAGTTGGGTGGGTGGTTGGTGAATAGAAAGATGGATGTGTaGGGACACCTGGGGCACTTCCTGATGTTGCTGGCATTGCTGAAC	+
Preference number: 2 (lower is better) Translates to: ISQLGGWLVNRKMDV*GHLGHFLMLLALLN Trigger: GTTCAGCAATGCCAGCAACATCAGGAAGTGCCCCAGGTGTCCCAACACATCCATCTTTCTATTCACCAACCACCCACCCAACTGTGAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAAGTTCACAGGAAACGGTGTGGGTaGAAAGGGAGTTTGCCATAC	+
Preference number: 2 (lower is better) Translates to: LQVNRARCFQAQPSNQVHRKRCG*KGSLPY Trigger: GTATGGCAAACTCCCTTTTCACCCACACCGTTTCCT...GTGAACTTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAAGCTGGACAAATGCCATaGTTCTGCCCTGCTGATTGT	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQAGQMP*FCPADC Trigger: ACAATCAGCAGGGCAGAAGCATGGCATTTGTCCAGC...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATAGAGTCCGGAAGTCACTGGGGATAGCCAGTTaGTCAGCACTCAGCTCACCC	+
Preference number: 2 (lower is better) Translates to: FSSGKVKMYRSSDRVRKSLGIAS*SALSSP Trigger: GGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAG...TGACTTCCGGACTCTATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAAAAGAAGGAAACGGTGTaGGTGAAAAGGGAGTTTGCC	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQKKETV*VKREFA Trigger: GGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTT...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 90 bp	ATAGAGTCCGGAAGTCAGGTAAAAATCTCACAGTTGGGTGGGTGGTaGGTGAATAGAAAGATGGATGTGTTGGGACACCTGGGGCACTTC	+
Preference number: 2 (lower is better) Translates to: IESGSQVKISQLGGW*VNRKMDVLGHLGHF Trigger: GAAGTGCCCCAGGTGTCCCAACACATCCATCTTTCTATTCACCAACCACCCACCCAACTGTGAGATTTTTACCTGACTTCCGGACTCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	ATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACCCACCAACAATCCCGAAGGACGAGATTaGTACAAAAGGACCAAATTG	+
Preference number: 2 (lower is better) Translates to: IAELGIASCSALSSPTNNPEGRD*YKRTKL Trigger: CAATTTGGTCCTTTTGTAGCAATCTCGTCCTTCGGG...ATTGTTGGTGGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
3UTR-3UTR CCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAATCACAGTTGGGTGGGTaGTTGGTGAATAGAAAGATG	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQSQLGG*LVNRKM Trigger: CATCTTTCTATTCACCAACCACCCACCCAACTGTGA...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	GAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACCCACCAACAATAGAAGAATATTCAGGCCAAAGTaGTTCAGCTTCTCAAGTCAC	+
Preference number: 2 (lower is better) Translates to: ELGIASCSALSSPTNNRRIFRPK*FSFSSH Trigger: GTGACTTGAGAAGCTGAATCACTTTGGCCTGAATAT...TCTTCTATTGTTGGTGGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216398.2
3UTR-3UTR GCA 90 bp	GAAGAACTCATTGAGAATGTCCAGGGCAACCCTCTCCAAACACATACGGAGGAACCTTACCCTCCCAAATaGCTGTACATCACCTCAAGT	+
Preference number: 2 (lower is better) Translates to: EELIENVQGNPLQTHTEEPYPPK*LYITSS Trigger: ACTTGAGGTGATGTACAGGCATTTGGGAGGGTAAGG...TTCCTCCGTATGTGTTTGGAGAGGGTTGCCCTGGACATTCTCAATGAGTTCTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
3UTR-3UTR CCA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACCTACTGAAATCGTCCTaGATGCTTCCTTGGCTTCTT	+
Preference number: 2 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDLLKSS*MLPWLL Trigger: AAGAAGCCAAGGAAGCATCCAGGACGATTTCAGTAG...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 90 bp	ACTCATCTCTCGGCCAGTTTAATCCCCTCAATATCCTGTTCAGCCTaGTGTGAGTCTCAGATGCCTCCTGTAAAACGAGGACTAATACTG	+
Preference number: 2 (lower is better) Translates to: THLSASLIPSISCSA*CESQMPPVKRGLIL Trigger: CAGTATTAGTCCTCGTTTTACAGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACTGGCCGAGAGATGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATGTGCCTTTGCTATCATaGGCAAGGGGTTTGGTTTGC	+
Preference number: 2 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDVPLLS*ARGLVC Trigger: GCAAACCAAACCCCTTGCTCATGATAGCAAAGGCAC...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CTGACACTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAATTATCTAAAGTCATTTaGAGCACAGGGGACAACTCT	+
Preference number: 2 (lower is better) Translates to: LTLQVNRARCFQAQPSNQLSKVI*STGDNS Trigger: AGAGTTGTCCCCTGTGCTCCAAATGACTTTAGATAA...TTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAGTGTCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGCTTCCTTGGCTTCTTaGAAGTTCTGGGTTTGTTCC	+
Preference number: 2 (lower is better) Translates to: VRHFNPENSLIRVSNLGSASLAS*KFWVCS Trigger: GGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGC...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 90 bp	ATAGGAGTTCTGATAGAGTCCGGAAGTCAGGTAAAAATCTCACAGTaGGGTGGGTGGTTGGTGAATAGAAAGATGGATGTGTTGGGACAC	+
Preference number: 2 (lower is better) Translates to: IGVLIESGSQVKISQ*GGWLVNRKMDVLGH Trigger: GTGTCCCAACACATCCATCTTTCTATTCACCAACCACCCACCCAACTGTGAGATTTTTACCTGACTTCCGGACTCTATCAGAACTCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CACAGAACCAGGGCTTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTGTGCCTTTGCTATCATaGGCAAGGGGTTTGGTTTGC	+
Preference number: 2 (lower is better) Translates to: HRTRAFSFIKQVRGRSLSVPLLS*ARGLVC Trigger: GCAAACCAAACCCCTTGCTCATGATAGCAAAGGCAC...AGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTATAGCCTCGAAACACTaGGCTCCAGAATGTATTCCA	+
Preference number: 2 (lower is better) Translates to: VRHFNPENSLIRVSNLGSIASKH*APECIP Trigger: TGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTAT...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR GCA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGATTGTAGATGCCAAATaGCACCCACATCCACCTTAC	+
Preference number: 2 (lower is better) Translates to: ETLLEPCACALVYTHTCAIVDAK*HPHPPY Trigger: GTAAGGTGGATGTGGGTGGCATTTGGCATCTACAAT...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
3UTR-3UTR CCA 90 bp	GGATTATGGAGACATAGCCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCATCACAGTTGGGTGGGTaGTTGGTGAATAGAAAGATG	+
Preference number: 2 (lower is better) Translates to: GLWRHSLETLSSRMYSSASQLGG*LVNRKM Trigger: CATCTTTCTATTCACCAACCACCCACCCAACTGTGA...TGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTAGGCCTTTGGGATTATaGAGACATAGCCTCGAAACA	+
Preference number: 2 (lower is better) Translates to: VRHFNPENSLIRVSNLGSRPLGL*RHSLET Trigger: TGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCCT...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR CCA 90 bp	CTTACTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCGCTTCTTGGAAGTTCTaGGTTTGTTCCAGGCCTTTG	+
Preference number: 2 (lower is better) Translates to: LTESHLHLFIYHKASCPCASWKF*VCSRPL Trigger: CAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGC...GCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGCTACTGAAATCGTCCTaGATGCTTCCTTGGCTTCTT	+
Preference number: 2 (lower is better) Translates to: ETLLEPCACALVYTHTCALLKSS*MLPWLL Trigger: AAGAAGCCAAGGAAGCATCCAGGACGATTTCAGTAG...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 90 bp	GTTATATCGCTTTCAAAACCTACTGAAATCGTCCTGGATGCTTCCTaGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTA	+
Preference number: 2 (lower is better) Translates to: VISLSKPTEIVLDAS*ASWKFWVCSRPLGL Trigger: TAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGCATCCAGGACGATTTCAGTAGGTTTTGAAAGCGATATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR TCA 90 bp	CATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATAGTGCCTTTGCTATCATaGGCAAGGGGTTTGGTTTGC	+
Preference number: 2 (lower is better) Translates to: HFNPENSLIRVSNLGSVIVPLLS*ARGLVC Trigger: GCAAACCAAACCCCTTGCTCATGATAGCAAAGGCAC...TATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCATCCTTTTGCTGCAGTaGAGGACAACCCAATTGCAG	+
Preference number: 2 (lower is better) Translates to: HNVCLAVHMDSRDHTETLILLLQ*RTTQLQ Trigger: CTGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGAT...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	AAGCACTTTACCTATTGGGCTATCACCTTAGCCCTTTCCACTTTTAAGCCCACTATAGCCTCGAAACACTaGGCTCCAGAATGTATTCCA	+
Preference number: 2 (lower is better) Translates to: KHFTYWAITLALSTFKPTIASKH*APECIP Trigger: TGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTAT...AGTGGGCTTAAAAGTGGAAAGGGCTAAGGTGATAGCCCAATAGGTAAAGTGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTCTGTTCAGCCTTGTGTaGGTCTCAGATGCCTCCTGT	+
Preference number: 2 (lower is better) Translates to: FLIYKTSERKVSVSLSVSLFSLV*VSDASC Trigger: ACAGGAGGCATCTGAGACTCACACAAGGCTGAACAG...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTGTAAGAGTGGAGGCATaGAACTCATCTCTCGGCCAG	+
Preference number: 2 (lower is better) Translates to: FLIYKTSERKVSVSLSVSVRVEA*NSSLGQ Trigger: CTGGCCGAGAGATGAGTTTCATGCCTCCACTCTTAC...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCTATCATGCTTCTGCCCTGCTaGTTGTTAAGAGTCCTCAAA	+
Preference number: 2 (lower is better) Translates to: LSLTCIFLYTIRPPALAIMLLPC*LLRVLK Trigger: TTTGAGGACTCTTAACAATCAGCAGGGCAGAAGCAT...GATAGCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAACCTCTGCTGGACAAATaGCATGCTTCTGCCCTGCTG	+
Preference number: 2 (lower is better) Translates to: SLSTCNSILMSRANPETQPLLDK*HASALL Trigger: CAGCAGGGCAGAAGCATGGCATTTGTCCAGCAGAGG...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAAGAAAGGCTCCAGAGCTaGGCACGTCTAGTCTGGGAT	+
Preference number: 2 (lower is better) Translates to: SLSTCNSILMSRANPETQERLQS*ARLVWD Trigger: ATCCCAGACTAGACGTGCGCAGCTCTGGAGCCTTTC...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TCTTATAGAGCTCCTCAGAGTGAGGACAACTCTCTTACTGAGTCTCACTTGCATAGGCCTTTGGGATTATaGAGACATAGCCTCGAAACA	+
Preference number: 2 (lower is better) Translates to: SYRAPQSEDNSLTESHLHRPLGL*RHSLET Trigger: TGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCCT...ATGCAAGTGAGACTCAGTAAGAGAGTTGTCCTCACTCTGAGGAGCTCTATAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CACAGAACCAGGGCTTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTGCTTCTTGGAAGTTCTaGGTTTGTTCCAGGCCTTTG	+
Preference number: 2 (lower is better) Translates to: HRTRAFSFIKQVRGRSLSASWKF*VCSRPL Trigger: CAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGC...AGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CGTGTGCATCTTTATGTAAGTATGCTTATGGGCCTTAACTTGTGTGCATGTATAGTGCCTTTGCTATCATaGGCAAGGGGTTTGGTTTGC	+
Preference number: 2 (lower is better) Translates to: RVHLYVSMLMGLNLCACIVPLLS*ARGLVC Trigger: GCAAACCAAACCCCTTGCTCATGATAGCAAAGGCAC...TATACATGCACACAAGTTAAGGCCCATAAGCATACTTACATAAAGATGCACACG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCATAGCCTCGAAACACTaGGCTCCAGAATGTATTCCA	+
Preference number: 2 (lower is better) Translates to: HNVCLAVHMDSRDHTETLIASKH*APECIP Trigger: TGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTAT...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	CACCAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATGCTTCTGCCCTGCTaGTTGTTAAGAGTCCTCAAA	+
Preference number: 2 (lower is better) Translates to: HQYPNMTSTGEVFRSYTPMLLPC*LLRVLK Trigger: TTTGAGGACTCTTAACAATCAGCAGGGCAGAAGCAT...AGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGTACATTTGCATTGACTaGGTGAATTCACAGAACCAG	+
Preference number: 2 (lower is better) Translates to: ETLLEPCACALVYTHTCAYICID*VNSQNQ Trigger: CTGGTTCTGTGAATTCACTCAGTCAATGCAAATGTA...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	AAGCACTTTACCTATTGGGCTATCACCTTAGCCCTTTCCACTTTTAAGCCCACTCAGAATGTATTCCAGTaGACACAGAAGATGTCTCTG	+
Preference number: 2 (lower is better) Translates to: KHFTYWAITLALSTFKPTQNVFQ*TQKMSL Trigger: CAGAGACATCTTCTGTGTGCACTGGAATACATTCTG...AGTGGGCTTAAAAGTGGAAAGGGCTAAGGTGATAGCCCAATAGGTAAAGTGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TTCCTTCCAATATACATTCATCCTTTTGCTGCAGTGAAGGACAACCCAATTGCATCCATGGAGAGATGTTaGCTCTTCAGTTCAGGCAAG	+
Preference number: 2 (lower is better) Translates to: FLPIYIHPFAAVKDNPIASMERC*LFSSGK Trigger: CTTGCCTGAACTGAAGAGCCAACATCTCTCCATGGA...TGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGATGAATGTATATTGGAAGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTCCATGGAGAGATGTTaGCTCTTCAGTTCAGGCAAG	+
Preference number: 2 (lower is better) Translates to: QYPNMTSTGEVFRSYTPISMERC*LFSSGK Trigger: CTTGCCTGAACTGAAGAGCCAACATCTCTCCATGGA...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCGCTTCCTTGGCTTCTTaGAAGTTCTGGGTTTGTTCC	+
Preference number: 2 (lower is better) Translates to: QYPNMTSTGEVFRSYTPIASLAS*KFWVCS Trigger: GGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGC...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTATCCTTTTGCTGCAGTaGAGGACAACCCAATTGCAG	+
Preference number: 2 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFILLLQ*RTTQLQ Trigger: CTGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGAT...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCCATTCATCCTTTTGCTaGAGTGAAGGACAACCCAAT	+
Preference number: 2 (lower is better) Translates to: HNVCLAVHMDSRDHTETLHSSFC*SEGQPN Trigger: ATTGGGTTGTCCTTCACTGCAGCAAAAGGATGAATG...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCTATCTTATCTAAAGTCATTTaGAGCACAGGGGACAACTCT	+
Preference number: 2 (lower is better) Translates to: LSLTCIFLYTIRPPALAILSKVI*STGDNS Trigger: AGAGTTGTCCCCTGTGCTCCAAATGACTTTAGATAA...GATAGCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTAAAGCCCGATGGGGGTaGAGAAGGGTCTTTCTTATA	+
Preference number: 2 (lower is better) Translates to: FLIYKTSERKVSVSLSVSKARWG*RRVFLI Trigger: TATAAGAAAGACCCTTCTCCACCCCCATCGGGCTTT...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTAATAGAAGAACTCATTaGGAATGTCCAGGGCAACCC	+
Preference number: 2 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFNRRTH*ECPGQP Trigger: GGGTTGCCCTGGACATTCTCAATGAGTTCTTCTATT...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	AATGCCACACTTTGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCAATATACAATCCTTTTGCTGCAGTaGAGGACAACCCAATTGCAG	+
Preference number: 2 (lower is better) Translates to: NATLWLLNKLIRASFQYTILLLQ*RTTQLQ Trigger: CTGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGAT...TGTATATTGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR TCA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATATAGCCTCGAAACACTaGGCTCCAGAATGTATTCCA	+
Preference number: 2 (lower is better) Translates to: ISTQKIHSSVFPISGVLYIASKH*APECIP Trigger: TGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTAT...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR CCA 90 bp	AATGCCACACTTTGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCAATATACATCCATGGAGAGATGTTaGCTCTTCAGTTCAGGCAAG	+
Preference number: 2 (lower is better) Translates to: NATLWLLNKLIRASFQYTSMERC*LFSSGK Trigger: CTTGCCTGAACTGAAGAGCCAACATCTCTCCATGGA...TGTATATTGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAAAAGAAGGAAACGGTGTaGGTGAAAAGGGAGTTTGCC	+
Preference number: 2 (lower is better) Translates to: SLSTCNSILMSRANPETQKKETV*VKREFA Trigger: GGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTT...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTATACATTCATCCTTTTaGTGCAGTGAAGGACAACCC	+
Preference number: 2 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFIHSSF*CSEGQP Trigger: GGGTTGTCCTTCACTGCAGCAAAAGGATGAATGTAT...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATCAGAATGTATTCCAGTaGACACAGAAGATGTCTCTG	+
Preference number: 2 (lower is better) Translates to: ISTQKIHSSVFPISGVLYQNVFQ*TQKMSL Trigger: CAGAGACATCTTCTGTGTGCACTGGAATACATTCTG...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR GCA 90 bp	CACCAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATGTCTCTTGGAGGATaGTTCAGATTCACAAATCTT	+
Preference number: 2 (lower is better) Translates to: HQYPNMTSTGEVFRSYTPMSLGG*FRFTNL Trigger: AAGATTTGTGAATCTGAAGCATCCTCCAAGAGACAT...AGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTGGTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCATGCAATTGTGTTTCTaGATAAACCCCCATGTACAA	+
Preference number: 2 (lower is better) Translates to: HNVCLAVHMDSRDHTETLMQLCF*INPHVQ Trigger: TTGTACATGGGGGTTTATCCAGAAACACAATTGCAT...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TTCCTTCCAATATACATTCATCCTTTTGCTGCAGTGAAGGACAACCCAATTGCAACGAGAGAATTATTGTaGCTTTGCTATCATGAGCAA	+
Preference number: 2 (lower is better) Translates to: FLPIYIHPFAAVKDNPIATRELL*LCYHEQ Trigger: TTGCTCATGATAGCAAAGGCACAATAATTCTCTCGT...TGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGATGAATGTATATTGGAAGGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCACGAGAGAATTATTGTaGCTTTGCTATCATGAGCAA	+
Preference number: 2 (lower is better) Translates to: QYPNMTSTGEVFRSYTPITRELL*LCYHEQ Trigger: TTGCTCATGATAGCAAAGGCACAATAATTCTCTCGT...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAACAGAATGTATTCCAGTaGACACAGAAGATGTCTCTG	+
Preference number: 2 (lower is better) Translates to: SLSTCNSILMSRANPETQQNVFQ*TQKMSL Trigger: CAGAGACATCTTCTGTGTGCACTGGAATACATTCTG...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CGTGTGCATCTTTATGTAAGTATGCTTATGGGCCTTAACTTGTGTGCATGTATAGCCATAATGTATGTCTaGCTGTTCACATGGATTCTA	+
Preference number: 2 (lower is better) Translates to: RVHLYVSMLMGLNLCACIAIMYV*LFTWIL Trigger: TAGAATCCATGTGAACAGCCAGACATACATTATGGC...TATACATGCACACAAGTTAAGGCCCATAAGCATACTTACATAAAGATGCACACG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAATTATCTAAAGTCATTTaGAGCACAGGGGACAACTCT	+
Preference number: 2 (lower is better) Translates to: SLSTCNSILMSRANPETQLSKVI*STGDNS Trigger: AGAGTTGTCCCCTGTGCTCCAAATGACTTTAGATAA...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCGTGAATGCCACACTTTaGCTTTTAAACAAACTAATC	+
Preference number: 2 (lower is better) Translates to: QYPNMTSTGEVFRSYTPIVNATL*LLNKLI Trigger: GATTAGTTTGTTTAAAAGCCAAAGTGTGGCATTCAC...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTATGCAATTGTGTTTCTaGATAAACCCCCATGTACAA	+
Preference number: 2 (lower is better) Translates to: FLIYKTSERKVSVSLSVSMQLCF*INPHVQ Trigger: TTGTACATGGGGGTTTATCCAGAAACACAATTGCAT...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 90 bp	GGCAGGAAAAGAATGACTTCAATGAATCAAAGTGAATGCCACACTTaGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCAATATACATT	+
Preference number: 2 (lower is better) Translates to: GRKRMTSMNQSECHT*AFKQTNQGFLPIYI Trigger: AATGTATATTGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATTCACTTTGATTCATTGAAGTCATTCTTTTCCTGCC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR GCA 90 bp	AATGCCACACTTTGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCAATATACAACGAGAGAATTATTGTaGCTTTGCTATCATGAGCAA	+
Preference number: 2 (lower is better) Translates to: NATLWLLNKLIRASFQYTTRELL*LCYHEQ Trigger: TTGCTCATGATAGCAAAGGCACAATAATTCTCTCGT...TGTATATTGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	GTGACCTGGTTAGCGAGTCTCAGATCTTCCTGTCTCTaGCTCCCCAGGTCTGGGATGACCAATGTGTGCCAT	+
Preference number: 3 (lower is better) Translates to: VTWLASLRSSCL*LPRSGMTNVCH Trigger: ATGGCACACATTGGTCATCCCAGACCTGGGGAGGCAGAGACAGGAAGATCTGAGACTCGCTAACCAGGTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	GGCCTGGTGACCTGGTTAGCGAGTCTCAGATCTTCCTGTCTCTGCCTCCCCAGGGTAAAAATCTCACAGTaGGGTGGGTGGTTGGTGAAT	+
Preference number: 3 (lower is better) Translates to: GLVTWLASLRSSCLCLPRVKISQ*GGWLVN Trigger: ATTCACCAACCACCCACCCAACTGTGAGATTTTTAC...CCTGGGGAGGCAGAGACAGGAAGATCTGAGACTCGCTAACCAGGTCACCAGGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 72 bp	GATGTCTGGCATCCACAAAGAAGGAAACGGTGTGGGTaGAAAGGGAGTTTGCCATACAAAGCCCGATGGGGG	+
Preference number: 3 (lower is better) Translates to: DVWHPQRRKRCG*KGSLPYKARWG Trigger: CCCCCATCGGGCTTTGTATGGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTTTGTGGATGCCAGACATC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	GGCGGATGTCTGGCATCCACAAAGAAGGAAACGGTGTaGGTGAAAAGGGAGTTTGCCATACAAAGCCCGATG	+
Preference number: 3 (lower is better) Translates to: GGCLASTKKETV*VKREFAIQSPM Trigger: CATCGGGCTTTGTATGGCAAACTCCCTTTTCACCCACACCGTTTCCTTCTTTGTGGATGCCAGACATCCGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	AGACTCTCCCGCTGGCGTGGCAAGCACTTTACCTATTaGGCTATCACCTTAGCCCTTTCCACTTTTAAGCCC	+
Preference number: 3 (lower is better) Translates to: RLSRWRGKHFTY*AITLALSTFKP Trigger: GGGCTTAAAAGTGGAAAGGGCTAAGGTGATAGCCCAATAGGTAAAGTGCTTGCCACGCCAGCGGGAGAGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	GGAGCTTGCCAAGTAAGTAAGTTTGGCCTGGTGACCTaGTTAGCGAGTCTCAGATCTTCCTGTCTCTGCCTC	+
Preference number: 3 (lower is better) Translates to: GACQVSKFGLVT*LASLRSSCLCL Trigger: GAGGCAGAGACAGGAAGATCTGAGACTCGCTAACCAGGTCACCAGGCCAAACTTACTTACTTGGCAAGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	GGATTATGGAGACATAGCCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCAACTGGGGATAGCCAGTaGCTCAGCACTCAGCTCACC	+
Preference number: 3 (lower is better) Translates to: GLWRHSLETLSSRMYSSATGDSQ*LSTQLT Trigger: GGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGT...TGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTaGTCAGCACTCAGCTCACCCACCAACAATAGAAGA	+
Preference number: 3 (lower is better) Translates to: DVAGIAELGIAS*SALSSPTNNRR Trigger: TCTTCTATTGTTGGTGGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CTCCAAGTCAACAGGGCAAGATGCTTTCAGGCCCAACCGAGTAACCAAGTTCACGTTTGTTCCAGGCCTTaGGGATTATGGAGACATAGC	+
Preference number: 3 (lower is better) Translates to: LQVNRARCFQAQPSNQVHVCSRP*GLWRHS Trigger: GCTATGTCTCCATAATCCCAAAGGCCTGGAACAAAC...GTGAACTTGGTTACTCGGTTGGGCCTGAAAGCATCTTGCCCTGTTGACTTGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	TGTCTCTGCCTCCCCAGGTCTGGGATGACCAATGTGTaGCATAATGTATGTCTGGCTGTTCACATGGATTCT	+
Preference number: 3 (lower is better) Translates to: CLCLPRSGMTNV*HNVCLAVHMDS Trigger: AGAATCCATGTGAACAGCCAGACATACATTATGGCACACATTGGTCATCCCAGACCTGGGGAGGCAGAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	GTTTTTGGAGACAGGGTCTCTCACTCTCCTGGAGCTTaGCAAGTAAGTAAGTTTGGCCTGGTGACCTGGTTA	+
Preference number: 3 (lower is better) Translates to: VFGDRVSHSPGA*QVSKFGLVTWL Trigger: TAACCAGGTCACCAGGCCAAACTTACTTACTTGGCAAGCTCCAGGAGAGTGAGAGACCCTGTCTCCAAAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	TGTGTGCATGTATATGTGGAGGCCAGAAGTCAACCTTaGGTGTCATTCCTCAGGCACTATCCACCTTGTTGG	+
Preference number: 3 (lower is better) Translates to: CVHVYVEARSQP*VSFLRHYPPCW Trigger: CCAACAAGGTGGATAGTGCCTGAGGAATGACACCCAAGGTTGACTTCTGGCCTCCACATATACATGCACACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGAGAAAGATGGATGTGTaGGGACACCTGGGGCACTTC	+
Preference number: 3 (lower is better) Translates to: ETLLEPCACALVYTHTCARKMDV*GHLGHF Trigger: GAAGTGCCCCAGGTGTCCCAACACATCCATCTTTCT...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACCAGTTGGGTGGGTGGTaGGTGAATAGAAAGATGGAT	+
Preference number: 3 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDQLGGW*VNRKMD Trigger: ATCCATCTTTCTATTCACCAACCACCCACCCAACTG...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	AGTTTAATCCCCTCAATATCCTGTTCAGCCTTGTGTGAGTCTCAGATGCCTCCTGGGCATGCTGCTCTCTaGTGTTCTAAGAGGCAGGAA	+
Preference number: 3 (lower is better) Translates to: SLIPSISCSALCESQMPPGHAAL*CSKRQE Trigger: TTCCTGCCTCTTAGAACACAAGAGAGCAGCATGCCC...AGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	ACCATGTGCTTGTGCACTAGTGTACACACACACATGTaGGCGCACACACACACATGCTTGCACACTTTTACA	+
Preference number: 3 (lower is better) Translates to: TMCLCTSVHTHM*AHTHTCLHTFT Trigger: TGTAAAAGTGTGCAAGCATGTGTGTGTGTGCGCGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	CCTACTGAAATCGTCCTGGATGCTTCCTTGGCTTCTTaGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTA	+
Preference number: 3 (lower is better) Translates to: PTEIVLDASLAS*KFWVCSRPLGL Trigger: TAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGCATCCAGGACGATTTCAGTAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR CAA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATAGAAAGATGGATGTGTaGGGACACCTGGGGCACTTC	+
Preference number: 3 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDRKMDV*GHLGHF Trigger: GAAGTGCCCCAGGTGTCCCAACACATCCATCTTTCT...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTTGTTCCAGGCCTTaGGGATTATGGAGACATAGC	+
Preference number: 3 (lower is better) Translates to: VRHFNPENSLIRVSNLGSVCSRP*GLWRHS Trigger: GCTATGTCTCCATAATCCCAAAGGCCTGGAACAAAC...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR TCA 72 bp	GGCCTTTGGGATTATGGAGACATAGCCTCGAAACACTaGGCTCCAGAATGTATTCCAGTGCACACAGAAGAT	+
Preference number: 3 (lower is better) Translates to: GLWDYGDIASKH*APECIPVHTED Trigger: ATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CCA 72 bp	TCCGGAAGTCAGGTAAAAATCTCACAGTTGGGTGGGTaGTTGGTGAATAGAAAGATGGATGTGTTGGGACAC	+
Preference number: 3 (lower is better) Translates to: SGSQVKISQLGG*LVNRKMDVLGH Trigger: GTGTCCCAACACATCCATCTTTCTATTCACCAACCACCCACCCAACTGTGAGATTTTTACCTGACTTCCGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CTTCCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGGAACGAGAGAATTATaGTGCCTTTGCTATCATGAG	+
Preference number: 3 (lower is better) Translates to: LPWLLGSSGFVPGLWDYGGTREL*CLCYHE Trigger: CTCATGATAGCAAAGGCACAATAATTCTCTCGTTCC...TCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCGGGCATGCTGCTCTCTaGTGTTCTAAGAGGCAGGAA	+
Preference number: 3 (lower is better) Translates to: QYPNMTSTGEVFRSYTPIGHAAL*CSKRQE Trigger: TTCCTGCCTCTTAGAACACAAGAGAGCAGCATGCCC...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCTATCGTTTGTTCCAGGCCTTaGGGATTATGGAGACATAGC	+
Preference number: 3 (lower is better) Translates to: LSLTCIFLYTIRPPALAIVCSRP*GLWRHS Trigger: GCTATGTCTCCATAATCCCAAAGGCCTGGAACAAAC...GATAGCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CTTACTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCGTTTGTTCCAGGCCTTaGGGATTATGGAGACATAGC	+
Preference number: 3 (lower is better) Translates to: LTESHLHLFIYHKASCPCVCSRP*GLWRHS Trigger: GCTATGTCTCCATAATCCCAAAGGCCTGGAACAAAC...GCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCCAGGTGCCATGTCTCTaGGAGGATGCTTCAGATTCA	+
Preference number: 3 (lower is better) Translates to: HNVCLAVHMDSRDHTETLQVPCL*EDASDS Trigger: TGAATCTGAAGCATCCTCCAAGAGACATGGCACCTG...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 72 bp	GCTTCCTTCCAATATACATTCATCCTTTTGCTGCAGTaGAGGACAACCCAATTGCAGACAGGACACAGAGAC	+
Preference number: 3 (lower is better) Translates to: ASFQYTFILLLQ*RTTQLQTGHRD Trigger: GTCTCTGTGTCCTGTCTGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGATGAATGTATATTGGAAGGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 72 bp	AGCCTCTGCTGGACAAATGCCATGCTTCTGCCCTGCTaGTTGTTAAGAGTCCTCAAAAACATCTTTCAGCTT	+
Preference number: 3 (lower is better) Translates to: SLCWTNAMLLPC*LLRVLKNIFQL Trigger: AAGCTGAAAGATGTTTTTGAGGACTCTTAACAATCAGCAGGGCAGAAGCATGGCATTTGTCCAGCAGAGGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 72 bp	GGGGTGGGGGACTTTACAAACACCAATACCCAAACATaGCATCTACAGGTGAGGTATTTAGAAGCTACACAC	+
Preference number: 3 (lower is better) Translates to: GVGDFTNTNTQT*HLQVRYLEATH Trigger: GTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTGGTGTTTGTAAAGTCCCCCACCCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	CACATACGGAGGAAACAGGGAACGAGAGAATTATTGTaGCTTTGCTATCATGAGCAAGGGGTTTGGTTTGCT	+
Preference number: 3 (lower is better) Translates to: HIRRKQGTRELL*LCYHEQGVWFA Trigger: AGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTCTCGTTCCCTGTTTCCTCCGTATGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
3UTR GCA 72 bp	TCAGGGCTTCCTTCCAATATACATTCATCCTTTTGCTaGAGTGAAGGACAACCCAATTGCAGACAGGACACA	+
Preference number: 3 (lower is better) Translates to: SGLPSNIHSSFC*SEGQPNCRQDT Trigger: TGTGTCCTGTCTGCAATTGGGTTGTCCTTCACTGCAGCAAAAGGATGAATGTATATTGGAAGGAAGCCCTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	TTGATTGGAAGCAAGGATAGAGTGAGGTTTAGTCCATaGAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCA	+
Preference number: 3 (lower is better) Translates to: LIGSKDRVRFSP*RDVGSSVQARS Trigger: TGACCTTGCCTGAACTGAAGAGCCAACATCTCTCCATGGACTAAACCTCACTCTATCCTTGCTTCCAATCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTGGGCATGCTGCTCTCTaGTGTTCTAAGAGGCAGGAA	+
Preference number: 3 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFGHAAL*CSKRQE Trigger: TTCCTGCCTCTTAGAACACAAGAGAGCAGCATGCCC...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CACCAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTTGCTTCCTTGGCTTCTaGGAAGTTCTGGGTTTGTTC	+
Preference number: 3 (lower is better) Translates to: HQYPNMTSTGEVFRSYTPCFLGF*EVLGLF Trigger: GAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGCA...AGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTGTCCTGGATGCTTCCTaGGCTTCTTGGAAGTTCTGG	+
Preference number: 3 (lower is better) Translates to: FLIYKTSERKVSVSLSVSVLDAS*ASWKFW Trigger: CCAGAACTTCCAAGAAGCCAAGGAAGCATCCAGGAC...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATGTCCTGGATGCTTCCTaGGCTTCTTGGAAGTTCTGG	+
Preference number: 3 (lower is better) Translates to: ISTQKIHSSVFPISGVLYVLDAS*ASWKFW Trigger: CCAGAACTTCCAAGAAGCCAAGGAAGCATCCAGGAC...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR TCA 72 bp	TCTAAAGTCATTTGGAGCACAGGGGACAACTCTAGTTaGGTTGGGAGCTACTTGATTGGAAGCAAGGATAGA	+
Preference number: 3 (lower is better) Translates to: SKVIWSTGDNSS*VGSYLIGSKDR Trigger: TCTATCCTTGCTTCCAATCAAGTAGCTCCCAACTCAACTAGAGTTGTCCCCTGTGCTCCAAATGACTTTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR TCA 72 bp	CAGTTTAATCCCCTCAATATCCTGTTCAGCCTTGTGTaGGTCTCAGATGCCTCCTGTAAAACGAGGACTAAT	+
Preference number: 3 (lower is better) Translates to: QFNPLNILFSLV*VSDASCKTRTN Trigger: ATTAGTCCTCGTTTTACAGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	CGGAGGAAACAGGGAACGAGAGAATTATTGTGCCTTTaGTATCATGAGCAAGGGGTTTGGTTTGCTCAATAT	+
Preference number: 3 (lower is better) Translates to: RRKQGTRELLCL*YHEQGVWFAQY Trigger: ATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTCTCGTTCCCTGTTTCCTCCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
3UTR CCA 72 bp	TGCCATATAGCTATTGCCCTCAGGTGCCATGTCTCTTaGAGGATGCTTCAGATTCACAAATCTTTGTGTGAA	+
Preference number: 3 (lower is better) Translates to: CHIAIALRCHVS*RMLQIHKSLCE Trigger: TTCACACAAAGATTTGTGAATCTGAAGCATCCTCCAAGAGACATGGCACCTGAGGGCAATAGCTATATGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCATATCCTGTTCAGCCTaGTGTGAGTCTCAGATGCCT	+
Preference number: 3 (lower is better) Translates to: QYPNMTSTGEVFRSYTPIISCSA*CESQMP Trigger: AGGCATCTGAGACTCACACAAGGCTGAACAGGATAT...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CACAGAACCAGGGCTTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTGGAACGAGAGAATTATaGTGCCTTTGCTATCATGAG	+
Preference number: 3 (lower is better) Translates to: HRTRAFSFIKQVRGRSLSGTREL*CLCYHE Trigger: CTCATGATAGCAAAGGCACAATAATTCTCTCGTTCC...AGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATTGCTTCCTTGGCTTCTaGGAAGTTCTGGGTTTGTTC	+
Preference number: 3 (lower is better) Translates to: ISTQKIHSSVFPISGVLYCFLGF*EVLGLF Trigger: GAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGCA...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR-3UTR CAA 90 bp	TCCCTTTCTACTTGCAATTCTATTTTGATGTCTAGAGCAAACCCAGAAACTCAACAGGTGCCATGTCTCTaGGAGGATGCTTCAGATTCA	+
Preference number: 3 (lower is better) Translates to: SLSTCNSILMSRANPETQQVPCL*EDASDS Trigger: TGAATCTGAAGCATCCTCCAAGAGACATGGCACCTG...TTGAGTTTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCACCCGAAGGACGAGATaGCTACAAAAGGACCAAATT	+
Preference number: 3 (lower is better) Translates to: QYPNMTSTGEVFRSYTPITRRTR*LQKDQI Trigger: AATTTGGTCCTTTTGTAGCAATCTCGTCCTTCGGGT...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
3UTR-3UTR CAA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTGTAAAAATCTCACAGTaGGGTGGGTGGTTGGTGAAT	+
Preference number: 3 (lower is better) Translates to: FLIYKTSERKVSVSLSVSVKISQ*GGWLVN Trigger: ATTCACCAACCACCCACCCAACTGTGAGATTTTTAC...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	TGTGTTCTAAGAGGCAGGAAAAGAATGACTTCAATGAATCAAAGTGAATGCCACGGAACGAGAGAATTATaGTGCCTTTGCTATCATGAG	+
Preference number: 3 (lower is better) Translates to: CVLRGRKRMTSMNQSECHGTREL*CLCYHE Trigger: CTCATGATAGCAAAGGCACAATAATTCTCTCGTTCC...GTGGCATTCACTTTGATTCATTGAAGTCATTCTTTTCCTGCCTCTTAGAACACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR-3UTR CAA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATGGAACGAGAGAATTATaGTGCCTTTGCTATCATGAG	+
Preference number: 3 (lower is better) Translates to: ISTQKIHSSVFPISGVLYGTREL*CLCYHE Trigger: CTCATGATAGCAAAGGCACAATAATTCTCTCGTTCC...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR GCA 72 bp	CAGCATAATCTTGCTCTGAAAACTTCCCTTTCTACTTaGAATTCTATTTTGATGTCTAGAGCAAACCCAGAA	+
Preference number: 3 (lower is better) Translates to: QHNLALKTSLST*NSILMSRANPE Trigger: TTCTGGGTTTGCTCTAGACATCAAAATAGAATTGCAAGTAGAAAGGGAAGTTTTCAGAGCAAGATTATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CCA 72 bp	GTCATGATCTCCCATAAGCAAATGCAATTGTGTTTCTaGATAAACCCCCATGTACAAACAAACCAGATAAAA	+
Preference number: 3 (lower is better) Translates to: VMISHKQMQLCF*INPHVQTNQIK Trigger: TTTTATCTGGTTTGTTTGTACATGGGGGTTTATCCAGAAACACAATTGCATTTGCTTATGGGAGATCATGAC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCATTCATGGAATTGCCCTaGACGGCTTCTGTCTCCGAG	+
Preference number: 4 (lower is better) Translates to: DVAGIAELGIASCSALSSFMELP*TASVSE Trigger: CTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAA...TGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	CCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGACCACTCCACTACAGTaGTGGCCTCCACCTCCTCCC	+
Preference number: 4 (lower is better) Translates to: PRNTELQNVFQCTQKMSLTTPLQ*WPPPPP Trigger: GGGAGGAGGTGGAGGCCACCACTGTAGTGGAGTGGT...CAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	ATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACCCACCAACAATTTCATGGAATTGCCCTaGACGGCTTCTGTCTCCGAG	+
Preference number: 4 (lower is better) Translates to: IAELGIASCSALSSPTNNFMELP*TASVSE Trigger: CTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAA...ATTGTTGGTGGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACGGGCTCTCCACCTCCTaGTGGCCATTTCGATACTCA	+
Preference number: 4 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDGLSTS*WPFRYS Trigger: TGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCC...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCAGGGGTATTAGTCTTGTaGTCTTCACAAAGGGCCGGT	+
Preference number: 4 (lower is better) Translates to: DVAGIAELGIASCSALSSGVLVL*SSQRAG Trigger: ACCGGCCCTTTGTGAAGACCACAAGACTAATACCCC...TGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACTCTCCACCTCCTGGTaGCCATTTCGATACTCATAT	+
Preference number: 4 (lower is better) Translates to: DVAGIAELGIASCSALSSLSTSW*PFRYSY Trigger: ATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAG...TGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	CAGCACTCAGCTCACCCACCAACAATAGAAGAACTCATTGAGAATGTCCAGGGCTGCATCTCAGCTTCATaGAATTGCCCTGCACGGCTT	+
Preference number: 4 (lower is better) Translates to: QHSAHPPTIEELIENVQGCISAS*NCPARL Trigger: AAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCA...GCCCTGGACATTCTCAATGAGTTCTTCTATTGTTGGTGGGTGAGCTGAGTGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	GAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTAGGGGGGCTCTCCACCTCCTaGTGGCCATTTCGATACTCA	+
Preference number: 4 (lower is better) Translates to: ELQNVFQCTQKMSLESLGGLSTS*WPFRYS Trigger: TGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCC...CCCTAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTC 50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	GAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTAGGGGGAGGATGTACATCATaGTTTCCGAGACCACGGAGG	+
Preference number: 4 (lower is better) Translates to: ELQNVFQCTQKMSLESLGGGCTS*FPRPRR Trigger: CCTCCGTGGTCTCGGAAATCATGATGTACATCCTCC...CCCTAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	ATAGAAGAACTCATTGAGAATGTCCAGGGCAACCCTCTCCAAACACATACGGAGGGAGGATGTACATCATaGTTTCCGAGACCACGGAGG	+
Preference number: 4 (lower is better) Translates to: IEELIENVQGNPLQTHTEGGCTS*FPRPRR Trigger: CCTCCGTGGTCTCGGAAATCATGATGTACATCCTCC...CTCCGTATGTGTTTGGAGAGGGTTGCCCTGGACATTCTCAATGAGTTCTTCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGGAGGATGTACATCATaGTTTCCGAGACCACGGAGG	+
Preference number: 4 (lower is better) Translates to: VRHFNPENSLIRVSNLGSGGCTS*FPRPRR Trigger: CCTCCGTGGTCTCGGAAATCATGATGTACATCCTCC...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGTCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: ETLLEPCACALVYTHTCASDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	GTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTTCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: VRHFNPENSLIRVSNLGSSDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...ACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	CAGCACTCAGCTCACCCACCAACAATAGAAGAACTCATTGAGAATGTCCAGGGCGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: QHSAHPPTIEELIENVQGVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...GCCCTGGACATTCTCAATGAGTTCTTCTATTGTTGGTGGGTGAGCTGAGTGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
CDS-3UTR CCA 90 bp	CATAATGTATGTCTGGCTGTTCACATGGATTCTAGAGATCATACGGAGACTCTCACTCCACTACAGTGGTaGCCTCCACCTCCTCCCTCT	+
Preference number: 4 (lower is better) Translates to: HNVCLAVHMDSRDHTETLTPLQW*PPPPPS Trigger: AGAGGGAGGAGGTGGAGGCCACCACTGTAGTGGAGT...GAGAGTCTCCGTATGATCTCTAGAATCCATGTGAACAGCCAGACATACATTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCACCACTCCACTACAGTaGTGGCCTCCACCTCCTCCC	+
Preference number: 4 (lower is better) Translates to: QYPNMTSTGEVFRSYTPITTPLQ*WPPPPP Trigger: GGGAGGAGGTGGAGGCCACCACTGTAGTGGAGTGGT...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 72 bp	TTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTaGGGATTATGGAGACATAGCCTCGAAACACTGAGC	+
Preference number: 4 (lower is better) Translates to: LASWKFWVCSRP*GLWRHSLETLS Trigger: GCTCAGTGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 72 bp	TCGGCCAGTTTAATCCCCTCAATATCCTGTTCAGCCTaGTGTGAGTCTCAGATGCCTCCTGTAAAACGAGGA	+
Preference number: 4 (lower is better) Translates to: SASLIPSISCSA*CESQMPPVKRG Trigger: TCCTCGTTTTACAGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACTGGCCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	CATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCAGCTTCTTCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: HEQGVWFAQYSGQSDSASSDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...AGAAGCTGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
CDS-3UTR TCA 90 bp	CCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: PRNTELQNVFQCTQKMSLVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...CAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR GCA 90 bp	TCTTATAGAGCTCCTCAGAGTGAGGACAACTCTCTTACTGAGTCTCACTTGCATTTCATGGAATTGCCCTaGACGGCTTCTGTCTCCGAG	+
Preference number: 4 (lower is better) Translates to: SYRAPQSEDNSLTESHLHFMELP*TASVSE Trigger: CTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAA...ATGCAAGTGAGACTCAGTAAGAGAGTTGTCCTCACTCTGAGGAGCTCTATAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR GCA 90 bp	GAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTGTGATGGATACGTCCTaGAGGTCTTTGCTCCCATTC	+
Preference number: 4 (lower is better) Translates to: EAFQPRKFTHPCFQSRECVMDTS*RSLLPF Trigger: GAATGGGAGCAAAGACCTGCAGGACGTATCCATCAC...ACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	TGTGCCTTTGCTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAACACAAAGGGCCGGTGTaGTTCGAACTCAAACTCCCT	+
Preference number: 4 (lower is better) Translates to: CAFAIMSKGFGLLNIQAKHKGPV*FELKLP Trigger: AGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTG...TTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATCACAAAGGGCCGGTGTaGTTCGAACTCAAACTCCCT	+
Preference number: 4 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDHKGPV*FELKLP Trigger: AGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTG...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	CAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCACTCCACTACAGTGGTaGCCTCCACCTCCTCCCTCT	+
Preference number: 4 (lower is better) Translates to: QYPNMTSTGEVFRSYTPITPLQW*PPPPPS Trigger: AGAGGGAGGAGGTGGAGGCCACCACTGTAGTGGAGT...GATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTACCACTCCACTACAGTaGTGGCCTCCACCTCCTCCC	+
Preference number: 4 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFTTPLQ*WPPPPP Trigger: GGGAGGAGGTGGAGGCCACCACTGTAGTGGAGTGGT...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	CCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGCTCTCCACCTCCTGGTaGCCATTTCGATACTCATAT	+
Preference number: 4 (lower is better) Translates to: PRNTELQNVFQCTQKMSLLSTSW*PFRYSY Trigger: ATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAG...CAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	AGCCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCCTCTCCACCTCCTGGTaGCCATTTCGATACTCATAT	+
Preference number: 4 (lower is better) Translates to: SLETLSSRMYSSAHRRCLLSTSW*PFRYSY Trigger: ATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAG...GAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGGGGGTATTAGTCTTGTaGTCTTCACAAAGGGCCGGT	+
Preference number: 4 (lower is better) Translates to: ETLLEPCACALVYTHTCAGVLVL*SSQRAG Trigger: ACCGGCCCTTTGTGAAGACCACAAGACTAATACCCC...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	GAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTAGGGGGGGTATTAGTCTTGTaGTCTTCACAAAGGGCCGGT	+
Preference number: 4 (lower is better) Translates to: ELQNVFQCTQKMSLESLGGVLVL*SSQRAG Trigger: ACCGGCCCTTTGTGAAGACCACAAGACTAATACCCC...CCCTAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTC 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	TGCTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCATCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: CYHEQGVWFAQYSGQSDSSDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...TGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATGATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
CDS-3UTR TCA 90 bp	GTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATAGAGTCCGGAAGTCAGGTAGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: VQARSRCIGVLIESGSQVVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...TACCTGACTTCCGGACTCTATCAGAACTCCTATACATCTTGACCTTGCCTGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	CATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCAGCTTCTTCAGCTTCATGGAATTaGCCTGCACGGCTTCTGTCT	+
Preference number: 4 (lower is better) Translates to: HEQGVWFAQYSGQSDSASSASWN*PARLLS Trigger: AGACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGA...AGAAGCTGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATTGCATCTCAGCTTCATaGAATTGCCCTGCACGGCTT	+
Preference number: 4 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDCISAS*NCPARL Trigger: AAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCA...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	CTTACTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCGGGGTATTAGTCTTGTaGTCTTCACAAAGGGCCGGT	+
Preference number: 4 (lower is better) Translates to: LTESHLHLFIYHKASCPCGVLVL*SSQRAG Trigger: ACCGGCCCTTTGTGAAGACCACAAGACTAATACCCC...GCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
3UTR CAA 72 bp	CTTTCAAAACCTACTGAAATCGTCCTGGATGCTTCCTaGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCT	+
Preference number: 4 (lower is better) Translates to: LSKPTEIVLDAS*ASWKFWVCSRP Trigger: AGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGGAAGCATCCAGGACGATTTCAGTAGGTTTTGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	AAGCACTTTACCTATTGGGCTATCACCTTAGCCCTTTCCACTTTTAAGCCCACTGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: KHFTYWAITLALSTFKPTVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...AGTGGGCTTAAAAGTGGAAAGGGCTAAGGTGATAGCCCAATAGGTAAAGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	CTTACTGAGTCTCACTTGCATCTTTTTATATACCATAAGGCCTCCTGCCCTTGCGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: LTESHLHLFIYHKASCPCVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...GCAAGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	ACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTATCAGCTTCATGGAATTaGCCTGCACGGCTTCTGTCT	+
Preference number: 4 (lower is better) Translates to: TELQNVFQCTQKMSLESLSASWN*PARLLS Trigger: AGACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGA...TAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR GCA 90 bp	TATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCAGCTGTGATGGATACGTCCTaGAGGTCTTTGCTCCCATTC	+
Preference number: 4 (lower is better) Translates to: YHEQGVWFAQYSGQSDSAVMDTS*RSLLPF Trigger: GAATGGGAGCAAAGACCTGCAGGACGTATCCATCAC...AGCTGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATGATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR GCA 90 bp	CATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATACACAAAGGGCCGGTGTaGTTCGAACTCAAACTCCCT	+
Preference number: 4 (lower is better) Translates to: HFNPENSLIRVSNLGSVIHKGPV*FELKLP Trigger: AGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTG...TATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR GCA 90 bp	AAAACGAGGACTAATACTGATCCACAGACACTGAGAAATGAAGAAGTGAGGCATCACAAAGGGCCGGTGTaGTTCGAACTCAAACTCCCT	+
Preference number: 4 (lower is better) Translates to: KTRTNTDPQTLRNEEVRHHKGPV*FELKLP Trigger: AGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTG...ATGCCTCACTTCTTCATTTCTCAGTGTCTGTGGATCAGTATTAGTCCTCGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR CCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTGGGCTCTCCACCTCCTaGTGGCCATTTCGATACTCA	+
Preference number: 4 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFGLSTS*WPFRYS Trigger: TGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCC...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	CCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGCGAACTCAAACTCCCTaGACACATTACATGTGTAGA	+
Preference number: 4 (lower is better) Translates to: PRNTELQNVFQCTQKMSLRTQTP*THYMCR Trigger: TCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCG...CAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 72 bp	CCTCAGAGTGAGGACAACTCTCTTACTGAGTCTCACTaGCATCTTTTTATATACCATAAGGCCTCCTGCCCT	+
Preference number: 4 (lower is better) Translates to: PQSEDNSLTESH*HLFIYHKASCP Trigger: AGGGCAGGAGGCCTTATGGTATATAAAAAGATGCAAGTGAGACTCAGTAAGAGAGTTGTCCTCACTCTGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	GAGAATTATTGTGCCTTTGCTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTGGAGGATGTACATCATaGTTTCCGAGACCACGGAGG	+
Preference number: 4 (lower is better) Translates to: ENYCAFAIMSKGFGLLNIGGCTS*FPRPRR Trigger: CCTCCGTGGTCTCGGAAATCATGATGTACATCCTCC...AATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	AATGAAGAAGTGAGGCATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATGGAGGATGTACATCATaGTTTCCGAGACCACGGAGG	+
Preference number: 4 (lower is better) Translates to: NEEVRHFNPENSLIRVSNGGCTS*FPRPRR Trigger: CCTCCGTGGTCTCGGAAATCATGATGTACATCCTCC...ATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAATGCCTCACTTCTTCATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR TCA 90 bp	GAGAATTATTGTGCCTTTGCTATCATGAGCAAGGGGTTTGGTTTGCTCAATATTTCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: ENYCAFAIMSKGFGLLNISDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...AATATTGAGCAAACCAAACCCCTTGCTCATGATAGCAAAGGCACAATAATTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
CDS-3UTR TCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTTCAGACGCATTTTCCTaGGCTGCCTCTTCGGCCTTA	+
Preference number: 4 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFSDAFS*AASSAL Trigger: TAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGA...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR TCA 90 bp	ACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTAGTTCTCCTTGTTCTCTaGAGGGATAGCAAGGTAGTC	+
Preference number: 4 (lower is better) Translates to: TELQNVFQCTQKMSLESLVLLVL*RDSKVV Trigger: GACTACCTTGCTATCCCTTCAGAGAACAAGGAGAAC...TAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR GCA 90 bp	CGTGTGCATCTTTATGTAAGTATGCTTATGGGCCTTAACTTGTGTGCATGTATACACAAAGGGCCGGTGTaGTTCGAACTCAAACTCCCT	+
Preference number: 4 (lower is better) Translates to: RVHLYVSMLMGLNLCACIHKGPV*FELKLP Trigger: AGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTG...TATACATGCACACAAGTTAAGGCCCATAAGCATACTTACATAAAGATGCACACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	GGATTATGGAGACATAGCCTCGAAACACTGAGCTCCAGAATGTATTCCAGTGCACGAACTCAAACTCCCTaGACACATTACATGTGTAGA	+
Preference number: 4 (lower is better) Translates to: GLWRHSLETLSSRMYSSARTQTP*THYMCR Trigger: TCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCG...TGCACTGGAATACATTCTGGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 72 bp	GTACCCGAAGGACGAGATTGCTACAAAAGGACCAAATaGAAAGTCACTTCCATTGTAGATGCCAAATGCCAC	+
Preference number: 4 (lower is better) Translates to: VPEGRDCYKRTK*KVTSIVDAKCH Trigger: GTGGCATTTGGCATCTACAATGGAAGTGACTTTCAATTTGGTCCTTTTGTAGCAATCTCGTCCTTCGGGTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	TACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTATCTTTTGCATCTCAGCTTCATaGAATTGCCCTGCACGGCTT	+
Preference number: 4 (lower is better) Translates to: YPNMTSTGEVFRSYTPIFCISAS*NCPARL Trigger: AAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCA...AAAGATAGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CCA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATCGAACTCAAACTCCCTaGACACATTACATGTGTAGA	+
Preference number: 4 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDRTQTP*THYMCR Trigger: TCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCG...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATGGGGTATTAGTCTTGTaGTCTTCACAAAGGGCCGGT	+
Preference number: 4 (lower is better) Translates to: ISTQKIHSSVFPISGVLYGVLVL*SSQRAG Trigger: ACCGGCCCTTTGTGAAGACCACAAGACTAATACCCC...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR GCA 90 bp	AATGCCACACTTTGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCAATATACAGTGATGGATACGTCCTaGAGGTCTTTGCTCCCATTC	+
Preference number: 4 (lower is better) Translates to: NATLWLLNKLIRASFQYTVMDTS*RSLLPF Trigger: GAATGGGAGCAAAGACCTGCAGGACGTATCCATCAC...TGTATATTGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTCTCTCCACCTCCTGGTaGCCATTTCGATACTCATAT	+
Preference number: 4 (lower is better) Translates to: FLIYKTSERKVSVSLSVSLSTSW*PFRYSY Trigger: ATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAG...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	TTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTCTCTCTCTGTCTCTCGAACTCAAACTCCCTaGACACATTACATGTGTAGA	+
Preference number: 4 (lower is better) Translates to: FLIYKTSERKVSVSLSVSRTQTP*THYMCR Trigger: TCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCG...AGAGACAGAGAGAGAGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CCA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATCGAACTCAAACTCCCTaGACACATTACATGTGTAGA	+
Preference number: 4 (lower is better) Translates to: ISTQKIHSSVFPISGVLYRTQTP*THYMCR Trigger: TCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCG...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
3UTR CAA 72 bp	AGAATGACTTCAATGAATCAAAGTGAATGCCACACTTaGGCTTTTAAACAAACTAATCAGGGCTTCCTTCCA	+
Preference number: 4 (lower is better) Translates to: RMTSMNQSECHT*AFKQTNQGFLP Trigger: TGGAAGGAAGCCCTGATTAGTTTGTTTAAAAGCCAAAGTGTGGCATTCACTTTGATTCATTGAAGTCATTCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACCACTGCAGACGACCTaGGAAGGGGCTCTCCACCTC	+
Preference number: 5 (lower is better) Translates to: DVAGIAELGIASCSALSSPLQTT*EGALHL Trigger: GAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGG...TGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 90 bp	AGAACAGTGATGGATACGTCCTGCAGGTCTTTGCTCCCATTCCACTaGAGACGACCTTGGAAGGGGCTCTCCACCTCCTGGTGGCCATTT	+
Preference number: 5 (lower is better) Translates to: RTVMDTSCRSLLPFH*RRPWKGLSTSWWPF Trigger: AAATGGCCACCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCATCACTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS CCA 90 bp	AATCTTTACCGCCCTCAGGCCTGTAGAACCACTCCACTACAGTGGTaGCCTCCACCTCCTCCCTCTTCATGCAGGAGATGCATCTCAGCT	+
Preference number: 5 (lower is better) Translates to: NLYRPQACRTTPLQW*PPPPPSSCRRCISA Trigger: AGCTGAGATGCATCTCCTGCATGAAGAGGGAGGAGGTGGAGGCCACCACTGTAGTGGAGTGGTTCTACAGGCCTGAGGGCGGTAAAGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACCCACTGCAGACGACCTaGGAAGGGGCTCTCCACCTC	+
Preference number: 5 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDPLQTT*EGALHL Trigger: GAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGG...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS CCA 90 bp	GATACGTCCTGCAGGTCTTTGCTCCCATTCCACTGCAGACGACCTTaGAAGGGGCTCTCCACCTCCTGGTGGCCATTTCGATACTCATAT	+
Preference number: 5 (lower is better) Translates to: DTSCRSLLPFHCRRP*KGLSTSWWPFRYSY Trigger: ATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GATGTTGCTGGCATTGCTGAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCAACGTCCTGCAGGTCTTaGCTCCCATTCCACTGCAGA	+
Preference number: 5 (lower is better) Translates to: DVAGIAELGIASCSALSSTSCRS*LPFHCR Trigger: TCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGT...TGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTCAGCAATGCCAGCAACATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 90 bp	TCCCTCTTCATGCAGGAGATGCATCTCAGCTTCATGGAATTGCCCTaGACGGCTTCTGTCTCCGAGGGTACTTCTACACACACAGGGAAG	+
Preference number: 5 (lower is better) Translates to: SLFMQEMHLSFMELP*TASVSEGTSTHTGK Trigger: CTTCCCTGTGTGTGTAGAAGTACCCTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCATCTCCTGCATGAAGAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CAA 90 bp	GGCCTGGTGACCTGGTTAGCGAGTCTCAGATCTTCCTGTCTCTGCCTCCCCAGGTCATTCAGAGTGACATaGAGAACAGTGATGGATACG	+
Preference number: 5 (lower is better) Translates to: GLVTWLASLRSSCLCLPRSFRVT*RTVMDT Trigger: CGTATCCATCACTGTTCTCAATGTCACTCTGAATGA...CCTGGGGAGGCAGAGACAGGAAGATCTGAGACTCGCTAACCAGGTCACCAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 90 bp	CCAGAGTCATTCAGAGTGACATTGAGAACAGTGATGGATACGTCCTaGAGGTCTTTGCTCCCATTCCACTGCAGACGACCTTGGAAGGGG	+
Preference number: 5 (lower is better) Translates to: PESFRVTLRTVMDTS*RSLLPFHCRRPWKG Trigger: CCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCATCACTGTTCTCAATGTCACTCTGAATGACTCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS CCA 90 bp	CTCCCATTCCACTGCAGACGACCTTGGAAGGGGCTCTCCACCTCCTaGTGGCCATTTCGATACTCATATATAAGGAAATCTTTACCGCCC	+
Preference number: 5 (lower is better) Translates to: LPFHCRRPWKGLSTS*WPFRYSYIRKSLPP Trigger: GGGCGGTAAAGATTTCCTTATATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACCTCAGCTTCATGGAATaGCCCTGCACGGCTTCTGTC	+
Preference number: 5 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDLSFME*PCTASV Trigger: GACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAG...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS CCA 90 bp	CCATTCCACTGCAGACGACCTTGGAAGGGGCTCTCCACCTCCTGGTaGCCATTTCGATACTCATATATAAGGAAATCTTTACCGCCCTCA	+
Preference number: 5 (lower is better) Translates to: PFHCRRPWKGLSTSW*PFRYSYIRKSLPPS Trigger: TGAGGGCGGTAAAGATTTCCTTATATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GAACTGGGGATAGCCAGTTGCTCAGCACTCAGCTCACCCACCAACAATAGAAGAACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: ELGIASCSALSSPTNNRRTTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...TCTTCTATTGTTGGTGGGTGAGCTGAGTGCTGAGCAACTGGCTATCCCCAGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000216398.2
CDS-3UTR CAA 90 bp	TCCTGTCTCTGCCTCCCCAGGTCTGGGATGACCAATGTGTGCCATAATGTATGTACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: SCLCLPRSGMTNVCHNVCTTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...ACATACATTATGGCACACATTGGTCATCCCAGACCTGGGGAGGCAGAGACAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GAGAGATGTTGGCTCTTCAGTTCAGGCAAGGTCAAGATGTATAGGAGTTCTGATCTCAGCTTCATGGAATaGCCCTGCACGGCTTCTGTC	+
Preference number: 5 (lower is better) Translates to: ERCWLFSSGKVKMYRSSDLSFME*PCTASV Trigger: GACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAG...ATCAGAACTCCTATACATCTTGACCTTGCCTGAACTGAAGAGCCAACATCTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CAA 90 bp	AGTTTAATCCCCTCAATATCCTGTTCAGCCTTGTGTGAGTCTCAGATGCCTCCTGCAGGGGTATTAGTCTaGTGGTCTTCACAAAGGGCC	+
Preference number: 5 (lower is better) Translates to: SLIPSISCSALCESQMPPAGVLV*WSSQRA Trigger: GGCCCTTTGTGAAGACCACAAGACTAATACCCCTGC...AGGAGGCATCTGAGACTCACACAAGGCTGAACAGGATATTGAGGGGATTAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	TATCATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCAGCTACGTCCTGCAGGTCTTaGCTCCCATTCCACTGCAGA	+
Preference number: 5 (lower is better) Translates to: YHEQGVWFAQYSGQSDSATSCRS*LPFHCR Trigger: TCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGT...AGCTGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCATGATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GAAACACTGAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGCAGGGGTATTAGTCTaGTGGTCTTCACAAAGGGCC	+
Preference number: 5 (lower is better) Translates to: ETLSSRMYSSAHRRCLWKAGVLV*WSSQRA Trigger: GGCCCTTTGTGAAGACCACAAGACTAATACCCCTGC...TTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTCAGTGTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR CAA 90 bp	CCTTGGCTTCTTGGAAGTTCTGGGTTTGTTCCAGGCCTTTGGGATTATGGAGACTCATTCAGAGTGACATaGAGAACAGTGATGGATACG	+
Preference number: 5 (lower is better) Translates to: PWLLGSSGFVPGLWDYGDSFRVT*RTVMDT Trigger: CGTATCCATCACTGTTCTCAATGTCACTCTGAATGA...GTCTCCATAATCCCAAAGGCCTGGAACAAACCCAGAACTTCCAAGAAGCCAAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR CAA 90 bp	GTTTGTTCCAGGCCTTTGGGATTATGGAGACATAGCCTCGAAACACTGAGCTCCTCATTCAGAGTGACATaGAGAACAGTGATGGATACG	+
Preference number: 5 (lower is better) Translates to: VCSRPLGLWRHSLETLSSSFRVT*RTVMDT Trigger: CGTATCCATCACTGTTCTCAATGTCACTCTGAATGA...GGAGCTCAGTGTTTCGAGGCTATGTCTCCATAATCCCAAAGGCCTGGAACAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR CAA 90 bp	CACAGAACCAGGGCTTTCTCATTTATAAAACAAGTGAGAGGAAGGTCTCTGTCTGCAGGGGTATTAGTCTaGTGGTCTTCACAAAGGGCC	+
Preference number: 5 (lower is better) Translates to: HRTRAFSFIKQVRGRSLSAGVLV*WSSQRA Trigger: GGCCCTTTGTGAAGACCACAAGACTAATACCCCTGC...AGACAGAGACCTTCCTCTCACTTGTTTTATAAATGAGAAAGCCCTGGTTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	GAGCTCCAGAATGTATTCCAGTGCACACAGAAGATGTCTCTGGAAAGTTTAGGGACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: ELQNVFQCTQKMSLESLGTTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...CCCTAAACTTTCCAGAGACATCTTCTGTGTGCACTGGAATACATTCTGGAGCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS-3UTR CAA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATCTCAGCTTCATGGAATaGCCCTGCACGGCTTCTGTC	+
Preference number: 5 (lower is better) Translates to: ISTQKIHSSVFPISGVLYLSFME*PCTASV Trigger: GACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAG...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS-3UTR CAA 90 bp	TGTGTTCTAAGAGGCAGGAAAAGAATGACTTCAATGAATCAAAGTGAATGCCACACGTCCTGCAGGTCTTaGCTCCCATTCCACTGCAGA	+
Preference number: 5 (lower is better) Translates to: CVLRGRKRMTSMNQSECHTSCRS*LPFHCR Trigger: TCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGT...GTGGCATTCACTTTGATTCATTGAAGTCATTCTTTTCCTGCCTCTTAGAACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	ATGAGCAAGGGGTTTGGTTTGCTCAATATTCAGGCCAAAGTGATTCAGCTTCTCACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: MSKGFGLLNIQAKVIQLLTTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...GAGAAGCTGAATCACTTTGGCCTGAATATTGAGCAAACCAAACCCCTTGCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216398.2
CDS-3UTR CAA 90 bp	GAGACTTTATTGGAACCATGTGCTTGTGCACTAGTGTACACACACACATGTGCGTCATTCAGAGTGACATaGAGAACAGTGATGGATACG	+
Preference number: 5 (lower is better) Translates to: ETLLEPCACALVYTHTCASFRVT*RTVMDT Trigger: CGTATCCATCACTGTTCTCAATGTCACTCTGAATGA...CGCACATGTGTGTGTGTACACTAGTGCACAAGCACATGGTTCCAATAAAGTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	TGTGTTCTAAGAGGCAGGAAAAGAATGACTTCAATGAATCAAAGTGAATGCCACGCAGGGGTATTAGTCTaGTGGTCTTCACAAAGGGCC	+
Preference number: 5 (lower is better) Translates to: CVLRGRKRMTSMNQSECHAGVLV*WSSQRA Trigger: GGCCCTTTGTGAAGACCACAAGACTAATACCCCTGC...GTGGCATTCACTTTGATTCATTGAAGTCATTCTTTTCCTGCCTCTTAGAACACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	CGTGTGCATCTTTATGTAAGTATGCTTATGGGCCTTAACTTGTGTGCATGTATAGCAGGGGTATTAGTCTaGTGGTCTTCACAAAGGGCC	+
Preference number: 5 (lower is better) Translates to: RVHLYVSMLMGLNLCACIAGVLV*WSSQRA Trigger: GGCCCTTTGTGAAGACCACAAGACTAATACCCCTGC...TATACATGCACACAAGTTAAGGCCCATAAGCATACTTACATAAAGATGCACACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	CACCAATACCCAAACATGACATCTACAGGTGAGGTATTTAGAAGCTACACACCTACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: HQYPNMTSTGEVFRSYTPTTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...AGGTGTGTAGCTTCTAAATACCTCACCTGTAGATGTCATGTTTGGGTATTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	CGTGTGCATCTTTATGTAAGTATGCTTATGGGCCTTAACTTGTGTGCATGTATAACCACAGAGTTCTCCTaGTTCTCTGAAGGGATAGCA	+
Preference number: 5 (lower is better) Translates to: RVHLYVSMLMGLNLCACITTEFS*FSEGIA Trigger: TGCTATCCCTTCAGAGAACAAGGAGAACTCTGTGGT...TATACATGCACACAAGTTAAGGCCCATAAGCATACTTACATAAAGATGCACACG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS-3UTR CAA 90 bp	ATTTCAACCCAGAAAATTCACTCATCCGTGTTTCCAATCTCGGGAGTGTTATATTCATTCAGAGTGACATaGAGAACAGTGATGGATACG	+
Preference number: 5 (lower is better) Translates to: ISTQKIHSSVFPISGVLYSFRVT*RTVMDT Trigger: CGTATCCATCACTGTTCTCAATGTCACTCTGAATGA...ATATAACACTCCCGAGATTGGAAACACGGATGAGTGAATTTTCTGGGTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS CCA 72 bp	CGCCCTCAGGCCTGTAGAACCACTCCACTACAGTGGTaGCCTCCACCTCCTCCCTCTTCATGCAGGAGATGC	+
Preference number: 6 (lower is better) Translates to: RPQACRTTPLQW*PPPPPSSCRRC Trigger: GCATCTCCTGCATGAAGAGGGAGGAGGTGGAGGCCACCACTGTAGTGGAGTGGTTCTACAGGCCTGAGGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 72 bp	ATGGATACGTCCTGCAGGTCTTTGCTCCCATTCCACTaGAGACGACCTTGGAAGGGGCTCTCCACCTCCTGG	+
Preference number: 6 (lower is better) Translates to: MDTSCRSLLPFH*RRPWKGLSTSW Trigger: CCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS CAA 90 bp	TTCAGAGTGACATTGAGAACAGTGATGGATACGTCCTGCAGGTCTTaGCTCCCATTCCACTGCAGACGACCTTGGAAGGGGCTCTCCACC	+
Preference number: 6 (lower is better) Translates to: FRVTLRTVMDTSCRS*LPFHCRRPWKGLST Trigger: GGTGGAGAGCCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCATCACTGTTCTCAATGTCACTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 72 bp	ATGCAGGAGATGCATCTCAGCTTCATGGAATTGCCCTaGACGGCTTCTGTCTCCGAGGGTACTTCTACACAC	+
Preference number: 6 (lower is better) Translates to: MQEMHLSFMELP*TASVSEGTSTH Trigger: GTGTGTAGAAGTACCCTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCATCTCCTGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS CAA 72 bp	CTCTTCATGCAGGAGATGCATCTCAGCTTCATGGAATaGCCCTGCACGGCTTCTGTCTCCGAGGGTACTTCT	+
Preference number: 6 (lower is better) Translates to: LFMQEMHLSFME*PCTASVSEGTS Trigger: AGAAGTACCCTCGGAGACAGAAGCCGTGCAGGGCAATTCCATGAAGCTGAGATGCATCTCCTGCATGAAGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9
CDS CAA 72 bp	ACATTGAGAACAGTGATGGATACGTCCTGCAGGTCTTaGCTCCCATTCCACTGCAGACGACCTTGGAAGGGG	+
Preference number: 6 (lower is better) Translates to: TLRTVMDTSCRS*LPFHCRRPWKG Trigger: CCCCTTCCAAGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCATCACTGTTCTCAATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS GCA 72 bp	TTCAGAGTGACATTGAGAACAGTGATGGATACGTCCTaGAGGTCTTTGCTCCCATTCCACTGCAGACGACCT	+
Preference number: 6 (lower is better) Translates to: FRVTLRTVMDTS*RSLLPFHCRRP Trigger: AGGTCGTCTGCAGTGGAATGGGAGCAAAGACCTGCAGGACGTATCCATCACTGTTCTCAATGTCACTCTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8
CDS CCA 72 bp	TCACAAAGGGCCGGTGTGCTTCGAACTCAAACTCCCTaGACACATTACATGTGTAGAGGCCAGAGTCATTCA	+
Preference number: 6 (lower is better) Translates to: SQRAGVLRTQTP*THYMCRGQSHS Trigger: TGAATGACTCTGGCCTCTACACATGTAATGTGTCCAGGGAGTTTGAGTTCGAAGCACACCGGCCCTTTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2
CDS GCA 72 bp	AGGGATAGCAAGGTAGTCAGACGCATTTTCCTGAGCTaGCTCTTCGGCCTTAGAGACCTTTCTGTAGCAATA	+
Preference number: 6 (lower is better) Translates to: RDSKVVRRIFLS*LFGLRDLSVAI Trigger: TATTGCTACAGAAAGGTCTCTAAGGCCGAAGAGGCAGCTCAGGAAAATGCGTCTGACTACCTTGCTATCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8 ENSMUST00000176547.2 ENSMUST00000216398.2
CDS CCA 72 bp	TGCAGACGACCTTGGAAGGGGCTCTCCACCTCCTGGTaGCCATTTCGATACTCATATATAAGGAAATCTTTA	+
Preference number: 6 (lower is better) Translates to: CRRPWKGLSTSW*PFRYSYIRKSL Trigger: TAAAGATTTCCTTATATATGAGTATCGAAATGGCCACCAGGAGGTGGAGAGCCCCTTCCAAGGTCGTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000049941.12 ENSMUST00000114956.11 ENSMUST00000171835.9 ENSMUST00000176185.8

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