Pregenerated sensors for SCN3A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000057182Ensembl transcript IDs: ENSMUST00000066432.12, ENSMUST00000100069.9, ENSMUST00000238409.2, ENSMUST00000238417.2, ENSMUST00000238483.2, ENSMUST00000238512.2
Found 232 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGAAAAGAGTTGTATCATGTTAGGCAATTGCACAACTTTCCCACTTaGTTCCTGGTTAGAAAGGACAGAGCCCGTGTTAGATCCATGATA | + |
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Preference number: 1 (lower is better) Translates to: RKELYHVRQLHNFPT*FLVRKDRARVRSMI Trigger: TATCATGGATCTAACACGGGCTCTGTCCTTTCTAACCAGGAACCAAGTGGGAAAGTTGTGCAATTGCCTAACATGATACAACTCTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR GCA 90 bp | TTGAAGACTCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTTCAGGATACTGGCTATaGTCATGGCTCTTTGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: LKTRSSLKDRSTDSPSTFSGYWL*SWLFVS Trigger: GGAGACAAAGAGCCATGAGCATAGCCAGTATCCTGA...AAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGAGTCTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTCACAGAGTGGCAGTaGCAGAGGTCACTGTCTGGT | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVLTEWQ*QRSLSG Trigger: ACCAGACAGTGACCTCTGTCACTGCCACTCTGTGAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATCCTTAGAGTCCAGTTaGCACGGACACTTTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVSLESS*HGHFTF Trigger: GAAGGTAAAGTGTCCGTGTCAACTGGACTCTAAGGA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACCTCTTGTCAATGTTaGTACCCTGTCTCACAGAGT | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVTSCQC*YPVSQS Trigger: ACTCTGTGAGACAGGGTATCAACATTGACAAGAGGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATGGCAAAGAAATACTaGCCAGTAAGTGGAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVMAKKY*PVSGAG Trigger: ACCTGCTCCACTTACTGGGCAGTATTTCTTTGCCAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAAATTGTCAGTTTTGCTaGGAGCAGAAGATGGCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVNCQFC*EQKMAK Trigger: CTTTGCCATCTTCTGCTCTCAGCAAAACTGACAATT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACATCCTTAGAGTCCAGTTaGCACGGACACTTTACCTTC | + |
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Preference number: 2 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTSLESS*HGHFTF Trigger: GAAGGTAAAGTGTCCGTGTCAACTGGACTCTAAGGA...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCGAGTGTGCTATGAAATaGAGCATGAGTGTCCAAAAT | + |
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Preference number: 2 (lower is better) Translates to: PQNYTFNLIPKMELKTWVECAMK*SMSVQN Trigger: ATTTTGGACACTCATGCTTCATTTCATAGCACACTC...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACCAGGAAGATACACTaGGGCAGATTTTGTAAAAAT | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVTRKIH*GRFCKN Trigger: ATTTTTACAAAATCTGCCCCAGTGTATCTTCCTGGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR TCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGGTTCTGTATTGAGCTaGCAAAACTGTAAGAAACCC | + |
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Preference number: 2 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTGSVLS*QNCKKP Trigger: GGGTTTCTTACAGTTTTGTCAGCTCAATACAGAACC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATTACAGGCACATAACTaGTCAGATACAAACATAACA | + |
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Preference number: 2 (lower is better) Translates to: QATRVGRKWLGFEILTNVLQAHN*SDTNIT Trigger: TGTTATGTTTGTATCTGAGCAGTTATGTGCCTGTAA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAATGGCAAAGAAATACTaGCCAGTAAGTGGAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: CQSEALFYIVQYPWLQLKMAKKY*PVSGAG Trigger: ACCTGCTCCACTTACTGGGCAGTATTTCTTTGCCAT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAATCGCCATTCCCTGCATaGAGTTCATCAGTATACTAC | + |
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Preference number: 2 (lower is better) Translates to: CQSEALFYIVQYPWLQLKSPFPA*SSSVYY Trigger: GTAGTATACTGATGAACTGCATGCAGGGAATGGCGA...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCACACCATCCAGAAAGTaGAAGTATTTCAAAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: PQNYTFNLIPKMELKTWVTPSRK*KYFKVV Trigger: TACCACTTTGAAATACTTCCACTTTCTGGATGGTGT...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CCA 90 bp | GATCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACTGTTGGTCAGGATACTaGCTATGCTCATGGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: DPSQSNSQDALLSTMNHNCWSGY*LCSWLF Trigger: AAAGAGCCATGAGCATAGCCAGTATCCTGACCAACA...GTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| 3UTR-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAATCATGTTAGGCAATTaGACAACTTTCCCACTTGGT | + |
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Preference number: 2 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTIMLGN*TTFPLG Trigger: ACCAAGTGGGAAAGTTGTGCAATTGCCTAACATGAT...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAACGTTTATATATATTTaGCCAAACATGCACCACAGG | + |
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Preference number: 2 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTTFIYI*PNMHHR Trigger: CCTGTGGTGCATGTTTGGGCAAATATATATAAACGT...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAATAGGCTACAGAGTGTaGTATGAAATGAAGCATGAG | + |
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Preference number: 2 (lower is better) Translates to: CQSEALFYIVQYPWLQLKIGYRV*YEMKHE Trigger: CTCATGCTTCATTTCATAGCACACTCTGTAGCCTAT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGTGTTCTTTCTCAACTaGAGCCATTACTTTCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: CQSEALFYIVQYPWLQLKVFFLN*SHYFQR Trigger: TCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACAC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACATTACAGGCACATAACTaGTCAGATACAAACATAACA | + |
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Preference number: 2 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTLQAHN*SDTNIT Trigger: TGTTATGTTTGTATCTGAGCAGTTATGTGCCTGTAA...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAATACTTTCAAAGACAGTaGCTCTGGTGTAATGCATAT | + |
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Preference number: 2 (lower is better) Translates to: CQSEALFYIVQYPWLQLKYFQRQ*LWCNAY Trigger: ATATGCATTACACCAGAGCCACTGTCTTTGAAAGTA...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR TCA 72 bp | CAGCTGGTAATGGAAGCAGCAACCTCTTGTCAATGTTaGTACCCTGTCTCACAGAGTGGCAGTGACAGAGGT | + |
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Preference number: 3 (lower is better) Translates to: QLVMEAATSCQC*YPVSQSGSDRG Trigger: ACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCATTACCAGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGCTCCTTAGAGTCCAGTaGACACGGACACTTTACCTT | + |
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Preference number: 3 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVLLRVQ*TRTLYL Trigger: AAGGTAAAGTGTCCGTGTCAACTGGACTCTAAGGAG...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR CCA 72 bp | ATTCTTCAAGTTCCTCCATCGTGTTGGTCAGGATACTaGCTATGCTCATGGCTCTTTGTCTCCCAGAGGAAT | + |
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Preference number: 3 (lower is better) Translates to: ILQVPPSCWSGY*LCSWLFVSQRN Trigger: ATTCCTCTGGGAGACAAAGAGCCATGAGCATAGCCAGTATCCTGACCAACACGATGGAGGAACTTGAAGAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| 3UTR-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGGAAGCAGCAACCTCTaGTCAATGTTGATACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: QATRVGRKWLGFEILTNVGSSNL*SMLIPC Trigger: ACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR CCA 72 bp | TTGTATCATGTTAGGCAATTGCACAACTTTCCCACTTaGTTCCTGGTTAGAAAGGACAGAGCCCGTGTTAGA | + |
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Preference number: 3 (lower is better) Translates to: LYHVRQLHNFPT*FLVRKDRARVR Trigger: TCTAACACGGGCTCTGTCCTTTCTAACCAGGAACCAAGTGGGAAAGTTGTGCAATTGCCTAACATGATACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR CAA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCCTCCTTAGAGTCCAGTaGACACGGACACTTTACCTT | + |
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Preference number: 3 (lower is better) Translates to: PQNYTFNLIPKMELKTWVLLRVQ*TRTLYL Trigger: AAGGTAAAGTGTCCGTGTCAACTGGACTCTAAGGAG...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAACTCCCTGTTGGAAGCTaGCTCAGGACACACACACAC | + |
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Preference number: 3 (lower is better) Translates to: CQSEALFYIVQYPWLQLKLPVGS*LRTHTH Trigger: GTGTGTGTGTGTCCTGAGCAAGCTTCCAACAGGGAG...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR TCA 72 bp | CTAGAAAGGTATCTTTCAGAGGTGTTCTTTCTCAACTaGAGCCATTACTTTCAAAGACAGTGGCTCTGGTGT | + |
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Preference number: 3 (lower is better) Translates to: LERYLSEVFFLN*SHYFQRQWLWC Trigger: ACACCAGAGCCACTGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTTTCTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR CCA 72 bp | AAGGATTCTCTGCAGGCAACCAGAGTTGGTAGAAAATaGTTAGGGTTTGAGATTTTGACCAACGTATCTCTT | + |
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Preference number: 3 (lower is better) Translates to: KDSLQATRVGRK*LGFEILTNVSL Trigger: AAGAGATACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTGCAGAGAATCCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| 3UTR-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGGAAGCAGCAACCTCTaGTCAATGTTGATACCCTGT | + |
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Preference number: 3 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTGSSNL*SMLIPC Trigger: ACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CAA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCCATAAATTGTCAGTTTaGCTGAGAGCAGAAGATGGC | + |
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Preference number: 3 (lower is better) Translates to: PQNYTFNLIPKMELKTWVHKLSV*LRAEDG Trigger: GCCATCTTCTGCTCTCAGCAAAACTGACAATTTATG...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR-3UTR CAA 90 bp | GATCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACTATGCTCATGGCTCTTaGTCTCCCAGAGGAATCCTC | + |
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Preference number: 3 (lower is better) Translates to: DPSQSNSQDALLSTMNHNYAHGS*SPRGIL Trigger: GAGGATTCCTCTGGGAGACAAAGAGCCATGAGCATA...GTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| 3UTR CCA 72 bp | CAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTaGTTGCAATTGAAAATCAGAAAGCTCATTTCCCTC | + |
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Preference number: 3 (lower is better) Translates to: QSEALFYIVQYP*LQLKIRKLISL Trigger: GAGGGAAATGAGCTTTCTGATTTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR CCA 72 bp | ACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATaGGTCAGAATTTCTGGCCCTGATCATATTACATTT | + |
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Preference number: 3 (lower is better) Translates to: TFNLIPKMELKT*VRISGPDHITF Trigger: AAATGTAATATGATCAGGGCCAGAAATTCTGACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
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| 3UTR TCA 72 bp | TGTAGCAGGGTGTTACAAAACCCATGTGAACTTCTATaGATACAAATGTCGAATCAAATACAGGTTTTCTTT | + |
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Preference number: 3 (lower is better) Translates to: CSRVLQNPCELL*IQMSNQIQVFF Trigger: AAAGAAAACCTGTATTTGATTCGACATTTGTATTCATAGAAGTTCACATGGGTTTTGTAACACCCTGCTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| CDS-3UTR TCA 90 bp | TCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCAGGCCATACTCAAGAGAGACTaGTGGGGAGAGCACAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SQQSEGPKHGQPLHVCQAILKRD*WGEHSF Trigger: GAAGCTGTGCTCTCCCCATCAGTCTCTCTTGAGTAT...GGCCTGGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| CDS-3UTR CCA 90 bp | AAGACTCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCACTCCTTGGCACTCTTaGAGCTCAACTTGGAAGCTT | + |
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Preference number: 4 (lower is better) Translates to: KTRSSLKDRSTDSPSTFATPWHS*SSTWKL Trigger: AAGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGT...GGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGAGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| CDS-3UTR TCA 90 bp | TTGAAGACTCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTCTTGACGCTGTCTTCTaGTTCCGACTTGGGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: LKTRSSLKDRSTDSPSTFLDAVF*FRLGKP Trigger: AGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAG...AAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGAGTCTTCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCCGTCAGCACACTGCTaGACTGCTCCGTCATCGGGT | + |
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Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTPSAHC*TAPSSG Trigger: ACCCGATGACGGAGCAGTTCAGCAGTGTGCTGACGG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| CDS-3UTR CCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGCTCTCCCACGGCAATTaGCACCGTCACGGTGAGGCT | + |
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Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVLSHGN*HRHGEA Trigger: AGCCTCACCGTGACGGTGCCAATTGCCGTGGGAGAG...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| CDS-3UTR CCA 90 bp | TTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTGGTGGCTCGAGCCTGTaGCTGCTTAAAAGACACCAG | + |
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Preference number: 4 (lower is better) Translates to: LFTFSGRSNVNCASFRRAGGSSL*LLKRHQ Trigger: CTGGTGTCTTTTAAGCAGCCACAGGCTCGAGCCACC...AGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
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| CDS-3UTR TCA 90 bp | TCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCAGGCCGTTCACCAAATAAAATaGGCCCAAGAAAATTACCAG | + |
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Preference number: 4 (lower is better) Translates to: SQQSEGPKHGQPLHVCQAVHQIK*AQENYQ Trigger: CTGGTAATTTTCTTGGGCTCATTTTATTTGGTGAAC...GGCCTGGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
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| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGGTGCGGCACAAACAGTaGGTCTCTCCTGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVVRHKQ*VSPALA Trigger: AGCGAGAGCAGGAGAGACTCACTGTTTGTGCCGCAC...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTGTTTGGCTTTGCGATaGGGAGGGGAGGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVCLALR*GGEDPG Trigger: CCCTGGATCCTCCCCTCCTCATCGCAAAGCCAAACA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTCCATCGGGCTTGCTTaGCAAGAGCCTGACAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTSIGLA*QEPDSR Trigger: GCGACTGTCAGGCTCTTGGCAAGCAAGCCCGATGGA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTCCATCGGGCTTGCTTaGCAAGAGCCTGACAGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVSIGLA*QEPDSR Trigger: GCGACTGTCAGGCTCTTGGCAAGCAAGCCCGATGGA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTGCTCGAGCCTGTGGCTaGTTAAAAGACACCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LFTFSGRSNVNCASFRRAARACG*LKDTRV Trigger: CACTCTGGTGTCTTTTAAGCAGCCACAGGCTCGAGC...AGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTAACTCCGCCTCTTTCTaGTCAGCCTCCTCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTNSASF*SASSSV Trigger: CACACTGGAGGAGGCTGAGCAGAAAGAGGCGGAGTT...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TTGAAGACTCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTCGCTATCTTCAAAGGTaGTGTGTTCATCATCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LKTRSSLKDRSTDSPSTFRYLQR*CVHHPQ Trigger: TTGCGGATGATGAACACAGCACCTTTGAAGATAGCG...AAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGAGTCTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGATGGCACCAAGTTCTaGATAGCCAAGAGCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTDGTKF*IAKSVG Trigger: GCCAACGCTCTTGGCTATTCAGAACTTGGTGCCATC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTGGTACCGTTACTGTTaGGTCGCTCTCCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTWYRYC*VALQVC Trigger: ACAGACCTGGAGAGCGACGCAACAGTAACGGTACCA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTGGTACCGTTACTGTTaGGTCGCTCTCCAGGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVWYRYC*VALQVC Trigger: ACAGACCTGGAGAGCGACGCAACAGTAACGGTACCA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTTGGTCTCACCCTCCTTaGTTTCTTCCAGTTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LFTFSGRSNVNCASFRRAWSHPP*FLPVLT Trigger: AGTCAGAACTGGAAGAAAGCAAGGAGGGTGAGACCA...AGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CCA 90 bp | GCTTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTACGCCCGTGTTATTaGACATGCAGCTGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: ACSPSRGGATSTVLPSEELRPCY*TCSCLF Trigger: AAATAGACAGCTGCATGTCCAATAACACGGGCGTAG...CTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTAAAGCAAGCTTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTTGCTCTCCCACGGCAATTaGCACCGTCACGGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: FSKASFWLKVLLRFNFSLLSHGN*HRHGEA Trigger: AGCCTCACCGTGACGGTGCCAATTGCCGTGGGAGAG...CAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAAGCTTGCTTTACTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| 3UTR CAA 72 bp | TTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTaGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGT | + |
|
Preference number: 4 (lower is better) Translates to: FWLKVLLRFNFS*FTFSGRSNVNC Trigger: ACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCAAGAGATTCTCGAGTaGAAAGGCGGAAGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTQEILE*KGGSSQ Trigger: CTGAGAGCTTCCGCCTTTTCACTCGAGAATCTCTTG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGCAAGAGATTCTCGAGTaGAAAGGCGGAAGCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVQEILE*KGGSSQ Trigger: CTGAGAGCTTCCGCCTTTTCACTCGAGAATCTCTTG...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGATACTCAAGAGAGACTaGTGGGGAGAGCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVILKRD*WGEHSF Trigger: GAAGCTGTGCTCTCCCCATCAGTCTCTCTTGAGTAT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTGCTTGCCAAGAGCCTaGCAGTCGCTGAAATTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTCLPRA*QSLKLL Trigger: CAACAATTTCAGCGACTGTCAGGCTCTTGGCAAGCA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGGCCACTTGCAGCAATaGCAGGTAGCCAGCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVGHLQQ*QVASPN Trigger: GTTGGGGCTGGCTACCTGGCATTGCTGCAAGTGGCC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTTCCTCCATCGTGTTaGTCAGGATACTGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVPPSC*SGYWLC Trigger: GCATAGCCAGTATCCTGACCAACACGATGGAGGAAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGGTTCCTCCATCGTGTTaGTCAGGATACTGGCTATGC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVVPPSC*SGYWLC Trigger: GCATAGCCAGTATCCTGACCAACACGATGGAGGAAC...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTCTCCCACGGCAATTaGCACCGTCACGGTGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVLSHGN*HRHGEA Trigger: AGCCTCACCGTGACGGTGCCAATTGCCGTGGGAGAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTTAGCCTTCTCTTCCTaGCTTCTGTTTCAGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVLAFSS*LLFQWW Trigger: CCACCACTGAAACAGAAGTCAGGAAGAGAAGGCTAA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATGTTTGGCTTTGCGATaGGGAGGGGAGGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVCLALR*GGEDPG Trigger: CCCTGGATCCTCCCCTCCTCATCGCAAAGCCAAACA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGGAATCCTCCAGCATTTCCATCGAGATCTGGTAAGAACTTAGCCTTCTCTTGGTGGTACCTGGCCTaGCTAACGTTACTGTTGCGT | + |
|
Preference number: 4 (lower is better) Translates to: QRNPPAFPSRSGKNLAFSWWYLA*LTLLLR Trigger: ACGCAACAGTAACGTTAGTCAGGCCAGGTACCACCA...AGAGAAGGCTAAGTTCTTACCAGATCTCGATGGAAATGCTGGAGGATTCCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTCAGGATACTGGCTATaGTCATGGCTCTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVSGYWL*SWLFVS Trigger: GGAGACAAAGAGCCATGAGCATAGCCAGTATCCTGA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACTCCTTGGCACTCTTaGAGCTCAACTTGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVTPWHS*SSTWKL Trigger: AAGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAGTAAAGCAAGCTTCTaGCTTAAGGTCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVSKASF*LKVLLR Trigger: CCTGAGGAGGACCTTAAGCCAGAAGCTTGCTTTACT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTCATGTATTTGCTCTaGTCGTCCGTTTCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVMYLL*SSVSTI Trigger: GATGGTGGAAACGGACGACCAGAGCAAATACATGAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGGCTTTCTTCCAGTTCTaGCTCACTGCTAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVAFFQF*LTAKLF Trigger: GAAGAGTTTAGCAGTGAGTCAGAACTGGAAGAAAGC...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTTGTTCACCTTCTCGGGGGCTTTCTTCCAGTTCTaGCTCACTGCTAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FWLKVLLRFNFSLFTFSGAFFQF*LTAKLF Trigger: GAAGAGTTTAGCAGTGAGTCAGAACTGGAAGAAAGC...CCCCGAGAAGGTGAACAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTAGACAATCCTCCCCTTaGTTGTCTCTTTGTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTRQSSP*LSLCHT Trigger: CGTATGACAAAGAGACAATCAAGGGGAGGATTGTCT...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAGACAATCCTCCCCTTaGTTGTCTCTTTGTCATACG | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVRQSSP*LSLCHT Trigger: CGTATGACAAAGAGACAATCAAGGGGAGGATTGTCT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACGCTCTCCAGGTCTGTaGGGCACAAACAGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVRSPGL*GTNSES Trigger: AGACTCACTGTTTGTGCCGCACAGACCTGGAGAGCG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTCTTCATATACAGGCTaGAGTTTGACGTCCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTSSYTG*SLTSRE Trigger: TTCACGGGACGTCAAACTGCAGCCTGTATATGAAGA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTCCTTGAAATTTGTTTaGAGGTCGAGGGATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVSLKFV*RSRDGL Trigger: AAGCCCATCCCTCGACCTGCAAACAAATTTCAAGGA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTGTTGGTCAGGATACTaGCTATGCTCATGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTCWSGY*LCSWLF Trigger: AAAGAGCCATGAGCATAGCCAGTATCCTGACCAACA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTACGCCCGTGTTATTaGACATGCAGCTGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLRPCY*TCSCLF Trigger: AAATAGACAGCTGCATGTCCAATAACACGGGCGTAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TTCAGTAAAGCAAGCTTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTTGTTGATGGCGCCAGCTTaGTCTCACCCTCCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSKASFWLKVLLRFNFSLLMAPA*SHPPCF Trigger: AAAGCAAGGAGGGTGAGACCAAGCTGGCGCCATCAA...CAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAAGCTTGCTTTACTGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAAGGCGGAGGTGGCACTaGATCGAAAAATTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVRRRWH*IEKLPS Trigger: GGAAGGCAATTTTTCGATTCAGTGCCACCTCCGCCT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAGTAGTCTTGAGTCATaGGTCGAAACAGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVSSLES*VETAIR Trigger: TCTTATCGCTGTTTCGACTCATGACTCAAGACTACT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | GTCTCCCAGAGGAATCCTCCAGCATTTCCATCGAGATCTGGTAAGAACTTAGCCAGTAGTCTTGAGTCATaGGTCGAAACAGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSQRNPPAFPSRSGKNLASSLES*VETAIR Trigger: TCTTATCGCTGTTTCGACTCATGACTCAAGACTACT...GGCTAAGTTCTTACCAGATCTCGATGGAAATGCTGGAGGATTCCTCTGGGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGATGGCACCAAGTTCTaGATAGCCAAGAGCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVDGTKF*IAKSVG Trigger: GCCAACGCTCTTGGCTATTCAGAACTTGGTGCCATC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGGAATCCTCCAGCATTTCCATCGAGATCTGGTAAGAACTTAGCCTTCTCTACAGTGAGTCTCTCCTaGTCTCGCTATCTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QRNPPAFPSRSGKNLAFSTVSLS*SRYLQR Trigger: CCTTTGAAGATAGCGAGAGCAGGAGAGACTCACTGT...AGAGAAGGCTAAGTTCTTACCAGATCTCGATGGAAATGCTGGAGGATTCCTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTCACTCAGGGGCTCTaGACTTTCTTCTGTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVLTQGL*TFFCGN Trigger: GTTGCCACAGAAGAAAGTGCAGAGCCCCTGAGTGAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGGTCACTGTTTGGCTTTaGCTTGTTCTCATCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVVTVWL*LVLIVN Trigger: ATTGACGATGAGAACAAGCCAAAGCCAAACAGTGAC...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTCACTGTTTGGCTTTaGCTTGTTCTCATCGTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVTVWL*LVLIVN Trigger: ATTGACGATGAGAACAAGCCAAAGCCAAACAGTGAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTTCCAAGTCACTGTTTaGCTTTGGCTTGTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTFQVTV*LWLVLI Trigger: GATGAGAACAAGCCAAAGCCAAACAGTGACTTGGAA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| 3UTR CAA 72 bp | GTAACGAATGATACAGGACACCTCCCTGTTGGAAGCTaGCTCAGGACACACACACACTGTGGTACATATTTG | + |
|
Preference number: 4 (lower is better) Translates to: VTNDTGHLPVGS*LRTHTHCGTYL Trigger: CAAATATGTACCACAGTGTGTGTGTGTCCTGAGCAAGCTTCCAACAGGGAGGTGTCCTGTATCATTCGTTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAACAAATGTCCCATTTaGGTCCATTGTGCCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVNKCPI*VHCAIE Trigger: TTCAATGGCACAATGGACTCAAATGGGACATTTGTT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTTGACGCTGTCTTCTaGTTCCGACTTGGGAAACCT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVLDAVF*FRLGKP Trigger: AGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATACTCAAGAGAGACTaGTGGGGAGAGCACAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVILKRD*WGEHSF Trigger: GAAGCTGTGCTCTCCCCATCAGTCTCTCTTGAGTAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGTGCGGCACAAACAGTaGGTCTCTCCTGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTVRHKQ*VSPALA Trigger: AGCGAGAGCAGGAGAGACTCACTGTTTGTGCCGCAC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAACCGTCAGCACACTGCTaGACTGCTCCGTCATCGGGT | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKPSAHC*TAPSSG Trigger: ACCCGATGACGGAGCAGTTCAGCAGTGTGCTGACGG...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGGGTCCGTAGGGATTTaGTGGCACCAAGTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVGSVGI*WHQVLN Trigger: ATTCAGAACTTGGTGCCATCAAATCCCTACGGACCC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATATCCATCCAGCCTTTaGATGTGGCCACTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVYPSSL*MWPLAA Trigger: TGCTGCAAGTGGCCACATTCAAAGGCTGGATGGATA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATCGCTTGGAGGCCACTaGAAGCATTTATTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVSLGGH*KHLFLR Trigger: CCTGAGGAATAAATGCTTGCAGTGGCCTCCAAGCGA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACATGATGGAGGGGATTaGACCAACAAGAGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVHDGGD*TNKSVH Trigger: GTGAACGCTCTTGTTGGTGCAATCCCCTCCATCATG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGGCCACTTGCAGCAATaGCAGGTAGCCAGCCCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKGHLQQ*QVASPN Trigger: GTTGGGGCTGGCTACCTGGCATTGCTGCAAGTGGCC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACCAGGGTCATGTATTTaGTCTGGTCGTCCGTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVPGSCI*SGRPFP Trigger: TGGAAACGGACGACCAGAGCAAATACATGACCCTGG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | TTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTTGTTCACCTTCTCGGGGATTTTGTTCCCTTCGTaGATTTCTATCACTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: FWLKVLLRFNFSLFTFSGILFPS*ISITFG Trigger: GCCGAAAGTGATAGAAATCCACGAAGGGAACAAAAT...CCCCGAGAAGGTGAACAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTTCACCAAATAAAATaGGCCCAAGAAAATTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVHQIK*AQENYQ Trigger: CTGGTAATTTTCTTGGGCTCATTTTATTTGGTGAAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | TCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACAGGTGCGGCACAAACAGTaGGTCTCTCCTGCTCTCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SITIKFTRCFTFNHESQQVRHKQ*VSPALA Trigger: AGCGAGAGCAGGAGAGACTCACTGTTTGTGCCGCAC...CTGTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGCTTGCAGTCCTCATTaGTCTTGCAAACACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVACSPH*SCKHTP Trigger: AGGAGTGTGTTTGCAAGATCAATGAGGACTGCAAGC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCTATCCATCCAGCCTTTaGATGTGGCCACTTGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PQNYTFNLIPKMELKTWVYPSSL*MWPLAA Trigger: TGCTGCAAGTGGCCACATTCAAAGGCTGGATGGATA...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACAGTGAGTCTCTCCTaGTCTCGCTATCTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVTVSLS*SRYLQR Trigger: CCTTTGAAGATAGCGAGAGCAGGAGAGACTCACTGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACTCCTTGGCACTCTTaGAGCTCAACTTGGAAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVTPWHS*SSTWKL Trigger: AAGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAAGTAAAGCAAGCTTCTaGCTTAAGGTCCTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVSKASF*LKVLLR Trigger: CCTGAGGAGGACCTTAAGCCAGAAGCTTGCTTTACT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTGTCAAACACTTGTCTaGTTACAAAGTCAAAGACCA | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTCQTLV*LQSQRP Trigger: TGGTCTTTGACTTTGTAACCAGACAAGTGTTTGACA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGTCATGTATTTGCTCTaGTCGTCCGTTTCCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVVMYLL*SSVSTI Trigger: GATGGTGGAAACGGACGACCAGAGCAAATACATGAC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAAGGCGGAGGTGGCACTaGATCGAAAAATTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTRRRWH*IEKLPS Trigger: GGAAGGCAATTTTTCGATTCAGTGCCACCTCCGCCT...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACAACTTGGAAGCTTCTaGAGAACTCTCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVQLGSF*RTLQKF Trigger: GAACTTCTGGAGAGTTCTTCAGAAGCTTCCAAGTTG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACTGAATCGAAAAATTaGCTTCCCTTTATTCAACAC | + |
|
Preference number: 4 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVTESKN*LPFIQH Trigger: GTGTTGAATAAAGGGAAGGCAATTTTTCGATTCAGT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | GATCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACAACTCCGCCTCTTTCTaGTCAGCCTCCTCCAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DPSQSNSQDALLSTMNHNNSASF*SASSSV Trigger: CACACTGGAGGAGGCTGAGCAGAAAGAGGCGGAGTT...GTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACGCTATCTTCAAAGGTaGTGTGTTCATCATCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVRYLQR*CVHHPQ Trigger: TTGCGGATGATGAACACAGCACCTTTGAAGATAGCG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACAGCGCTCTCCAGGTCTGTaGGGCACAAACAGTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SITIKFTRCFTFNHESQQRSPGL*GTNSES Trigger: AGACTCACTGTTTGTGCCGCACAGACCTGGAGAGCG...CTGTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCATTTAATTTCTCCTTaGTTTCTTCCAGTTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTHLISP*FLPVLT Trigger: AGTCAGAACTGGAAGAAAGCAAGGAGAAATTAAATG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATCTTCATATACAGGCTaGAGTTTGACGTCCCGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVSSYTG*SLTSRE Trigger: TTCACGGGACGTCAAACTGCAGCCTGTATATGAAGA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACACTCACTCAGGGGCTCTaGACTTTCTTCTGTGGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTLTQGL*TFFCGN Trigger: GTTGCCACAGAAGAAAGTGCAGAGCCCCTGAGTGAG...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAAAAAGCAGAATCGCTTaGAGGCCACTGCAAGCATTT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVKSRIA*RPLQAF Trigger: AAATGCTTGCAGTGGCCTCCAAGCGATTCTGCTTTT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATGTTGGTCAGGATACTaGCTATGCTCATGGCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVCWSGY*LCSWLF Trigger: AAAGAGCCATGAGCATAGCCAGTATCCTGACCAACA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAAGTAGTCTTGAGTCATaGGTCGAAACAGCGATAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVSSLES*VETAIR Trigger: TCTTATCGCTGTTTCGACTCATGACTCAAGACTACT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAATGGTTTCCCTCCAAGTaGTCCCTCTGTCTCCTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKWFPSK*SLCLLF Trigger: GAAGAGGAGACAGAGGGAGCACTTGGAGGGAAACCA...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACACATGATGGAGGGGATTaGACCAACAAGAGCGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTHDGGD*TNKSVH Trigger: GTGAACGCTCTTGTTGGTGCAATCCCCTCCATCATG...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCTCCTTGAAATTTGTTTaGAGGTCGAGGGATGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: PQNYTFNLIPKMELKTWVSLKFV*RSRDGL Trigger: AAGCCCATCCCTCGACCTGCAAACAAATTTCAAGGA...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCCTACGCCCGTGTTATTaGACATGCAGCTGTCTATTT | + |
|
Preference number: 4 (lower is better) Translates to: PQNYTFNLIPKMELKTWVLRPCY*TCSCLF Trigger: AAATAGACAGCTGCATGTCCAATAACACGGGCGTAG...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGCTTGCAGTCCTCATTaGTCTTGCAAACACACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTACSPH*SCKHTP Trigger: AGGAGTGTGTTTGCAAGATCAATGAGGACTGCAAGC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGGGTCCGTAGGGATTTaGTGGCACCAAGTTCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKGSVGI*WHQVLN Trigger: ATTCAGAACTTGGTGCCATCAAATCCCTACGGACCC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVVIKMS*PPNFFF Trigger: GAAGAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAACAGTGAGTCTCTCCTaGTCTCGCTATCTTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTTVSLS*SRYLQR Trigger: CCTTTGAAGATAGCGAGAGCAGGAGAGACTCACTGT...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGTAATAGGGATCCATTaGGATGATTTTCAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVVIGIH*DDFQDH Trigger: ATGGTCCTGAAAATCATCGCAATGGATCCCTATTAC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCTTCCAAGTCACTGTTTaGCTTTGGCTTGTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: PQNYTFNLIPKMELKTWVFQVTV*LWLVLI Trigger: GATGAGAACAAGCCAAAGCCAAACAGTGACTTGGAA...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATTTTGTTCCCTTCGTaGATTTCTATCACTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVILFPS*ISITFG Trigger: GCCGAAAGTGATAGAAATCCACGAAGGGAACAAAAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACAAGATCTTTATAAGTaGCTCAAAGGTATAGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVQDLYK*LKGIDP Trigger: GGGATCTATACCTTTGAGTCACTTATAAAGATCTTG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGTTCACCAAATAAAATaGGCCCAAGAAAATTACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVVHQIK*AQENYQ Trigger: CTGGTAATTTTCTTGGGCTCATTTTATTTGGTGAAC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAATCAGGATACTGGCTATaGTCATGGCTCTTTGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKSGYWL*SWLFVS Trigger: GGAGACAAAGAGCCATGAGCATAGCCAGTATCCTGA...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTGTCTTTTCTGGGGTaGAATTCCCATTTAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QATRVGRKWLGFEILTNVLSFLG*NSHLIC Trigger: ACAAATTAAATGGGAATTCCACCCCAGAAAAGACAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR TCA 90 bp | GATCCATCACAATCAAATTCACAAGATGCTTTACTTTCAACCATGAATCACAACCAACTTGGAAGCTTCTaGAGAACTCTCCAGAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DPSQSNSQDALLSTMNHNQLGSF*RTLQKF Trigger: GAACTTCTGGAGAGTTCTTCAGAAGCTTCCAAGTTG...GTTGTGATTCATGGTTGAAAGTAAAGCATCTTGTGAATTTGATTGTGATGGATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGCTTTCTTCCAGTTCTaGCTCACTGCTAAACTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKAFFQF*LTAKLF Trigger: GAAGAGTTTAGCAGTGAGTCAGAACTGGAAGAAAGC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAACGCTATCTTCAAAGGTaGTGTGTTCATCATCCGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKRYLQR*CVHHPQ Trigger: TTGCGGATGATGAACACAGCACCTTTGAAGATAGCG...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCCATTTAATTTCTCCTTaGTTTCTTCCAGTTCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PQNYTFNLIPKMELKTWVHLISP*FLPVLT Trigger: AGTCAGAACTGGAAGAAAGCAAGGAGAAATTAAATG...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGTCTCCATAGATAAATaGAAGGTTCTTCCCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKVSIDK*KVLPSF Trigger: GAAGCTGGGAAGAACCTTCCATTTATCTATGGAGAC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAAACAAATGTCCCATTTaGGTCCATTGTGCCATTGAA | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKNKCPI*VHCAIE Trigger: TTCAATGGCACAATGGACTCAAATGGGACATTTGTT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR TCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGTCATAAAGATGTCTTaGCCTCCAAACTTCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKVIKMS*PPNFFF Trigger: GAAGAAGAAGTTTGGAGGTCAAGACATCTTTATGAC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR GCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGTAATAGGGATCCATTaGGATGATTTTCAGGACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKVIGIH*DDFQDH Trigger: ATGGTCCTGAAAATCATCGCAATGGATCCCTATTAC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAATTTTGTTCCCTTCGTaGATTTCTATCACTTTCGGC | + |
|
Preference number: 4 (lower is better) Translates to: CQSEALFYIVQYPWLQLKILFPS*ISITFG Trigger: GCCGAAAGTGATAGAAATCCACGAAGGGAACAAAAT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CCA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACACTGTCTTTTCTGGGGTaGAATTCCCATTTAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTLSFLG*NSHLIC Trigger: ACAAATTAAATGGGAATTCCACCCCAGAAAAGACAG...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| 3UTR CAA 72 bp | ACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTaGACCAACGTATCTCTTATTAGGATGGTAGAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TRVGRKWLGFEI*TNVSLIRMVEN Trigger: ATTTTCTACCATCCTAATAAGAGATACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| 3UTR CAA 72 bp | TCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTaGCAATTGAAAATCAGAAAGCTCATTTCCCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: SEALFYIVQYPW*QLKIRKLISLT Trigger: TGTGAGGGAAATGAGCTTTCTGATTTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| 3UTR CAA 72 bp | TCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTaGGTTGCAATTGAAAATCAGAAAGCTCATTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SVRGIILHSSIP*VAIENQKAHFP Trigger: AGGGAAATGAGCTTTCTGATTTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| 3UTR CAA 72 bp | GCATTATTTTACATAGTTCAATACCCTTGGTTGCAATaGAAAATCAGAAAGCTCATTTCCCTCACATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALFYIVQYPWLQ*KIRKLISLTFL Trigger: GAGAAATGTGAGGGAAATGAGCTTTCTGATTTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCAGGCCAGGAAACTCCTTCGCTaGACGCTGTCTTCTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: SQQSEGPKHGQPLHVCQARKLLR*TLSSDS Trigger: GGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCT...GGCCTGGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR CAA 90 bp | AAGACTCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCCACTCCTTGGCACTCTaGGAGCTCAACTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KTRSSLKDRSTDSPSTFAHSLAL*ELNLEA Trigger: AGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGTG...GGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGAGTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR CAA 90 bp | TCGCAGCAGTCTGAAGGACCGAAGCACGGACAGCCCCTCCACGTTTGCCAGGCCCTGAAAATGCTCGTTTaGCTATTGCGTCTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: SQQSEGPKHGQPLHVCQALKMLV*LLRLGE Trigger: TTCCCCAAGACGCAATAGCAAAACGAGCATTTTCAG...GGCCTGGCAAACGTGGAGGGGCTGTCCGTGCTTCGGTCCTTCAGACTGCTGCGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTTGATGGCGCCAGCTaGGTCTCACCCTCCTTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ACSPSRGGATSTVLPSEELDGAS*VSPSLL Trigger: AAGCAAGGAGGGTGAGACCAAGCTGGCGCCATCAAG...CTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTGACCAGAGTGGCATTCTaGATGGCGCCAGCTTGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: CSPSRGGATSTVLPSEELTRVAF*MAPAWS Trigger: AGACCAAGCTGGCGCCATCAAGAATGCCACTCTGGT...CAGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS TCA 90 bp | CCCATCCAGGGAGAACAGGAAACTCCTTCGCTTGACGCTGTCTTCTaGTTCCGACTTGGGAAACCTGTCTCCTTCGGGTCTGTGGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PIQGEQETPSLDAVF*FRLGKPVSFGSVVS Trigger: GGAAACCACAGACCCGAAGGAGACAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTCCCTGGATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
||
| CDS CCA 90 bp | CTGTCTTCTGATTCCGACTTGGGAAACCTGTCTCCTTCGGGTCTGTaGTTTCCCTCCAAGTGCTCCCTCTGTCTCCTCTTCTTCCTCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LSSDSDLGNLSPSGL*FPSKCSLCLLFFLR Trigger: TCGGAGGAAGAAGAGGAGACAGAGGGAGCACTTGGAGGGAAACCACAGACCCGAAGGAGACAGGTTTCCCAAGTCGGAATCAGAAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTGGTACCGTTACTGTaGCGTCGCTCTCCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVVPLL*RRSPGL Trigger: CAGACCTGGAGAGCGACGCAACAGTAACGGTACCAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | GCTTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGTTGGTCTCACCCTCCTaGCTTTCTTCCAGTTCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: ACSPSRGGATSTVLPSEELVSPS*LSSSSD Trigger: GTCAGAACTGGAAGAAAGCAAGGAGGGTGAGACCAA...CTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CAA 90 bp | TGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTGCTTCCTTCAGAAGAGCTGACTACGCCCGTGTTATaGGACATGCAGCTGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: CSPSRGGATSTVLPSEELTTPVL*DMQLSI Trigger: AATAGACAGCTGCATGTCCAATAACACGGGCGTAGT...CAGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAGGTTCAATTTCAGCTaGTTCACCTTCTCGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVRFNFS*FTFSGR Trigger: CCGCCCCGAGAAGGTGAACAAGCTGAAATTGAACCT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTACCAGGGTCATGTATTaGCTCTGGTCGTCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTTRVMY*LWSSVS Trigger: GGAAACGGACGACCAGAGCAAATACATGACCCTGGT...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGAGACCTTGGAGGGATaGGAAGCCATGAACCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTETLEG*EAMNRS Trigger: AGATCGGTTCATGGCTTCCAATCCCTCCAAGGTCTC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTAGGAAACTCCTTCGCTaGACGCTGTCTTCTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTRKLLR*TLSSDS Trigger: GGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCT...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAGGAAACTCCTTCGCTaGACGCTGTCTTCTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVRKLLR*TLSSDS Trigger: GGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGTATGCTCATGGCTCTTaGTCTCCCAGAGGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVYAHGS*SPRGIL Trigger: GAGGATTCCTCTGGGAGACAAAGAGCCATGAGCATA...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTAGTTCCTCCATCGTGTaGGTCAGGATACTGGCTATG | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTSSSIV*VRILAM Trigger: CATAGCCAGTATCCTGACCAACACGATGGAGGAACT...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTTCTCCCAGTAGTCTaGAGTCATGAGTCGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVLPVV*SHESKQ Trigger: CTGTTTCGACTCATGACTCAAGACTACTGGGAGAAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | GTCTCCCAGAGGAATCCTCCAGCATTTCCATCGAGATCTGGTAAGAACTTAGCCGTTCTCCCAGTAGTCTaGAGTCATGAGTCGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSQRNPPAFPSRSGKNLAVLPVV*SHESKQ Trigger: CTGTTTCGACTCATGACTCAAGACTACTGGGAGAAC...GGCTAAGTTCTTACCAGATCTCGATGGAAATGCTGGAGGATTCCTCTGGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238512.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACAGCCCCTCCACGTTaGCCAGGCCAAGCTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVTAPPR*PGQAPL Trigger: TAATGGAGCTTGGCCTGGCAAACGTGGAGGGGCTGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTTCCGTAGCAGCAAGGTaGTCTGAACTAAAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTSVAAR*SELKEL Trigger: GAGTTCCTTTAGTTCAGACAACCTTGCTGCTACGGA...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACCGCGATCTGGAGGTaGTTCATTTCGTTATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVTAIWR*FISLSS Trigger: CGATGATAACGAAATGAACAACCTCCAGATCGCGGT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGATAATCAATCCCCTTTaGCATCCTTCCCACCGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVIINPL*HPSHRD Trigger: ATCGCGGTGGGAAGGATGCAAAAGGGGATTGATTAT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACTACGCCCGTGTTATaGGACATGCAGCTGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVTTPVL*DMQLSI Trigger: AATAGACAGCTGCATGTCCAATAACACGGGCGTAGT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGCTGTTTGGCTTTGGCTaGTTCTCATCGTCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVLFGFG*FSSSMS Trigger: AGACATTGACGATGAGAACAAGCCAAAGCCAAACAG...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTGTTTGGCTTTGGCTaGTTCTCATCGTCAATGTCT | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLFGFG*FSSSMS Trigger: AGACATTGACGATGAGAACAAGCCAAAGCCAAACAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTTCCAAGTCACTGTTaGGCTTTGGCTTGTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLPSHC*ALACSH Trigger: ATGAGAACAAGCCAAAGCCAAACAGTGACTTGGAAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTGAAAATGCTCGTTTaGCTATTGCGTCTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLKMLV*LLRLGE Trigger: TTCCCCAAGACGCAATAGCAAAACGAGCATTTTCAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS GCA 90 bp | CAATTTCAGCTTGTTCACCTTCTCGGGGCGGAGCAACGTCAACTGTaGTTCCTTCAGAAGAGCTGGTTGCATTTAATTTCTCCTTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: QFQLVHLLGAEQRQL*FLQKSWLHLISPCF Trigger: AAAGCAAGGAGAAATTAAATGCAACCAGCTCTTCTGAAGGAAGCACAGTTGACGTTGCTCCGCCCCGAGAAGGTGAACAAGCTGAAATTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACACTCCTTGGCACTCTaGGAGCTCAACTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVHSLAL*ELNLEA Trigger: AGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGTG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGCTTCAGAAGAGCTGGTaGCATTTAATTTCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVLQKSW*HLISPC Trigger: GCAAGGAGAAATTAAATGCAACCAGCTCTTCTGAAG...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTTCAGAAGAGCTGGTaGCATTTAATTTCTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLQKSW*HLISPC Trigger: GCAAGGAGAAATTAAATGCAACCAGCTCTTCTGAAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATTCTTCCATCGGGCTaGCTTGCCAAGAGCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVILPSG*LAKSLT Trigger: TGTCAGGCTCTTGGCAAGCAAGCCCGATGGAAGAAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTATTTGAATGTGGCCACTaGCAGCAATGCCAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVFECGH*QQCQVA Trigger: GGCTACCTGGCATTGCTGCAAGTGGCCACATTCAAA...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGTCAAAGACCATTCCTaGAAATTTGTTTGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTVKDHS*KFVCRS Trigger: CGACCTGCAAACAAATTTCAAGGAATGGTCTTTGAC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTGGAACATTCCTACAATaGAGAGAATCACCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTGTFLQ*RESPPQ Trigger: TTGTGGTGGTGATTCTCTCAATTGTAGGAATGTTCC...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGGAAGCAGCAACCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGAAGACAATCCTCCCCTaGATTGTCTCTTTGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: WKQQPLVNVDTLSHRVAVKTILP*IVSLSY Trigger: GTATGACAAAGAGACAATCAAGGGGAGGATTGTCTT...CACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGGTTGCTGCTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCTCATCGTCAATGTCTaGTTCTTTCTTGGGTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTLIVNV*FFLGFL Trigger: AAGAAACCCAAGAAAGAACAAGACATTGACGATGAG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACAAAAGCAGAATCGCTaGGAGGCCACTGCAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVQKQNR*EATASI Trigger: AATGCTTGCAGTGGCCTCCAAGCGATTCTGCTTTTG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGTGGTACCGTTACTGTaGCGTCGCTCTCCAGGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKVVPLL*RRSPGL Trigger: CAGACCTGGAGAGCGACGCAACAGTAACGGTACCAC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCTATGCTCATGGCTCTTaGTCTCCCAGAGGAATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PQNYTFNLIPKMELKTWVYAHGS*SPRGIL Trigger: GAGGATTCCTCTGGGAGACAAAGAGCCATGAGCATA...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAACTACGCCCGTGTTATaGGACATGCAGCTGTCTATT | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVTTPVL*DMQLSI Trigger: AATAGACAGCTGCATGTCCAATAACACGGGCGTAGT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCTCTTGTCAATGTTGATACCCTGTCTCACAGAGTGGCAGTGACAGAGGTCACTCCCTTGATTGTCTCTTaGTCATACGTATTTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: PLVNVDTLSHRVAVTEVTPLIVS*SYVFDM Trigger: CATATCAAATACGTATGACAAAGAGACAATCAAGGG...AGTGACCTCTGTCACTGCCACTCTGTGAGACAGGGTATCAACATTGACAAGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTTCCAAGTCACTGTTaGGCTTTGGCTTGTTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVLPSHC*ALACSH Trigger: ATGAGAACAAGCCAAAGCCAAACAGTGACTTGGAAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTACTGAAAATGCTCGTTTaGCTATTGCGTCTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVLKMLV*LLRLGE Trigger: TTCCCCAAGACGCAATAGCAAAACGAGCATTTTCAG...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TTCAGTAAAGCAAGCTTCTGGCTTAAGGTCCTCCTCAGGTTCAATTTCAGCTTGATGCAGCTGTCTATTTaGTTCCCTTCGTGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FSKASFWLKVLLRFNFSLMQLSI*FPSWIS Trigger: AGAAATCCACGAAGGGAACAAAATAGACAGCTGCAT...CAAGCTGAAATTGAACCTGAGGAGGACCTTAAGCCAGAAGCTTGCTTTACTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238409.2 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACACAAAAGCAGAATCGCTaGGAGGCCACTGCAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTQKQNR*EATASI Trigger: AATGCTTGCAGTGGCCTCCAAGCGATTCTGCTTTTG...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAACACTCCTTGGCACTCTaGGAGCTCAACTTGGAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKHSLAL*ELNLEA Trigger: AGCTTCCAAGTTGAGCTCCAAGAGTGCCAAGGAGTG...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATGCAGCTGTCTATTTaGTTCCCTTCGTGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVMQLSI*FPSWIS Trigger: AGAAATCCACGAAGGGAACAAAATAGACAGCTGCAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAAGGTTCAATTTCAGCTaGTTCACCTTCTCGGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKRFNFS*FTFSGR Trigger: CCGCCCCGAGAAGGTGAACAAGCTGAAATTGAACCT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAATTGGTGAAATAGGTTaGAAATCCATAGGCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVIGEIG*KSIGHP Trigger: TGGGTGGCCTATGGATTTCAAACCTATTTCACCAAT...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAATTCTTCCATCGGGCTaGCTTGCCAAGAGCCTGACA | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKILPSG*LAKSLT Trigger: TGTCAGGCTCTTGGCAAGCAAGCCCGATGGAAGAAT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAATTTGAATGTGGCCACTaGCAGCAATGCCAGGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKFECGH*QQCQVA Trigger: GGCTACCTGGCATTGCTGCAAGTGGCCACATTCAAA...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAGAGACCTTGGAGGGATaGGAAGCCATGAACCGATCT | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKETLEG*EAMNRS Trigger: AGATCGGTTCATGGCTTCCAATCCCTCCAAGGTCTC...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGTTCTCCCAGTAGTCTaGAGTCATGAGTCGAAACAG | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTVLPVV*SHESKQ Trigger: CTGTTTCGACTCATGACTCAAGACTACTGGGAGAAC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACATCCGTAGCAGCAAGGTaGTCTGAACTAAAGGAACTC | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTSVAAR*SELKEL Trigger: GAGTTCCTTTAGTTCAGACAACCTTGCTGCTACGGA...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CAGGCAACCAGAGTTGGTAGAAAATGGTTAGGGTTTGAGATTTTGACCAACGTAGCTGATGTCAAACACTaGTCTGGTTACAAAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QATRVGRKWLGFEILTNVADVKH*SGYKVK Trigger: TTTGACTTTGTAACCAGACAAGTGTTTGACATCAGC...TACGTTGGTCAAAATCTCAAACCCTAACCATTTTCTACCAACTCTGGTTGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
||
| CDS-3UTR CAA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCGCTGATGTCAAACACTaGTCTGGTTACAAAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: PQNYTFNLIPKMELKTWVADVKH*SGYKVK Trigger: TTTGACTTTGTAACCAGACAAGTGTTTGACATCAGC...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAATTGGTGAAATAGGTTaGAAATCCATAGGCCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTIGEIG*KSIGHP Trigger: TGGGTGGCCTATGGATTTCAAACCTATTTCACCAAT...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGTCAAAGACCATTCCTaGAAATTTGTTTGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTVKDHS*KFVCRS Trigger: CGACCTGCAAACAAATTTCAAGGAATGGTCTTTGAC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | AAGGTATCTTTCAGAGGTGTTCTTTCTCAACTGAAGCCATTACTTTCAAAGACAGGAACATTCCTACAATaGAGAGAATCACCACCACAA | + |
|
Preference number: 5 (lower is better) Translates to: KVSFRGVLSQLKPLLSKTGTFLQ*RESPPQ Trigger: TTGTGGTGGTGATTCTCTCAATTGTAGGAATGTTCC...TGTCTTTGAAAGTAATGGCTTCAGTTGAGAAAGAACACCTCTGAAAGATACCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | CCACAGAATTACACCTTTAATCTGATACCAAAAATGGAGCTGAAGACATGGGTCCCCTTGATTGTCTCTTaGTCATACGTATTTGATATG | + |
|
Preference number: 5 (lower is better) Translates to: PQNYTFNLIPKMELKTWVPLIVS*SYVFDM Trigger: CATATCAAATACGTATGACAAAGAGACAATCAAGGG...GACCCATGTCTTCAGCTCCATTTTTGGTATCAGATTAAAGGTGTAATTCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAATGCAGCTGTCTATTTaGTTCCCTTCGTGGATTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKMQLSI*FPSWIS Trigger: AGAAATCCACGAAGGGAACAAAATAGACAGCTGCAT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS-3UTR CAA 90 bp | TGTCAGTCAGAGGCATTATTTTACATAGTTCAATACCCTTGGTTGCAATTGAAAAAGACAATCCTCCCCTaGATTGTCTCTTTGTCATAC | + |
|
Preference number: 5 (lower is better) Translates to: CQSEALFYIVQYPWLQLKKTILP*IVSLSY Trigger: GTATGACAAAGAGACAATCAAGGGGAGGATTGTCTT...TTTCAATTGCAACCAAGGGTATTGAACTATGTAAAATAATGCCTCTGACTGACA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000066432.12 |
||
| CDS CAA 90 bp | CCGCTCAGCGGGTTCCCATCCAGGGAGAACAGGAAACTCCTTCGCTaGACGCTGTCTTCTGATTCCGACTTGGGAAACCTGTCTCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: PLSGFPSRENRKLLR*TLSSDSDLGNLSPS Trigger: CGAAGGAGACAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTCCCTGGATGGGAACCCGCTGAGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS TCA 72 bp | AACTCTCCAGAAGTTCTCCTAACCCTCCTATCCCACTaGAGTCTCTGGACGCTGCTGAGGCAGCTGCCACCG | + |
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Preference number: 6 (lower is better) Translates to: NSPEVLLTLLSH*SLWTLLRQLPP Trigger: CGGTGGCAGCTGCCTCAGCAGCGTCCAGAGACTTCAGTGGGATAGGAGGGTTAGGAGAACTTCTGGAGAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS TCA 72 bp | GGAAGCCCTGGCACCATCCTGGATGACATACTGGCCTaGCTAACGTTACTGTTGCGTCGCTCTCCAGGTCTG | + |
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Preference number: 6 (lower is better) Translates to: GSPGTILDDILA*LTLLLRRSPGL Trigger: CAGACCTGGAGAGCGACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238417.2 ENSMUST00000238483.2 |
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| CDS TCA 72 bp | CTTCCCATTGGCTGGAAGCCCTGGCACCATCCTGGATaGCATACTGGCCTGACTAACGTTACTGTTGCGTCG | + |
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Preference number: 6 (lower is better) Translates to: LPIGWKPWHHPG*HTGLTNVTVAS Trigger: CGACGCAACAGTAACGTTAGTCAGGCCAGTATGTCATCCAGGATGGTGCCAGGGCTTCCAGCCAATGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000238417.2 ENSMUST00000238483.2 |
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| CDS CCA 72 bp | GATTCCGACTTGGGAAACCTGTCTCCTTCGGGTCTGTaGTTTCCCTCCAAGTGCTCCCTCTGTCTCCTCTTC | + |
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Preference number: 6 (lower is better) Translates to: DSDLGNLSPSGL*FPSKCSLCLLF Trigger: GAAGAGGAGACAGAGGGAGCACTTGGAGGGAAACCACAGACCCGAAGGAGACAGGTTTCCCAAGTCGGAATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS CAA 72 bp | GGGTTCCCATCCAGGGAGAACAGGAAACTCCTTCGCTaGACGCTGTCTTCTGATTCCGACTTGGGAAACCTG | + |
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Preference number: 6 (lower is better) Translates to: GFPSRENRKLLR*TLSSDSDLGNL Trigger: CAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTCCCTGGATGGGAACCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS CAA 90 bp | GAGAACAGGAAACTCCTTCGCTTGACGCTGTCTTCTGATTCCGACTaGGGAAACCTGTCTCCTTCGGGTCTGTGGTTTCCCTCCAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: ENRKLLRLTLSSDSD*GNLSPSGLWFPSKC Trigger: GCACTTGGAGGGAAACCACAGACCCGAAGGAGACAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS TCA 72 bp | GGAGAACAGGAAACTCCTTCGCTTGACGCTGTCTTCTaGTTCCGACTTGGGAAACCTGTCTCCTTCGGGTCT | + |
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Preference number: 6 (lower is better) Translates to: GEQETPSLDAVF*FRLGKPVSFGS Trigger: AGACCCGAAGGAGACAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS TCA 72 bp | GGTTCCCATCCAGGGAGAACAGGAAACTCCTTCGCTTaGCGCTGTCTTCTGATTCCGACTTGGGAAACCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSHPGRTGNSFA*RCLLIPTWETC Trigger: ACAGGTTTCCCAAGTCGGAATCAGAAGACAGCGTCAAGCGAAGGAGTTTCCTGTTCTCCCTGGATGGGAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238417.2 ENSMUST00000238483.2 ENSMUST00000238512.2 |
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| CDS TCA 72 bp | TTCACATTCTTCCATCGGGCTTGCTTGCCAAGAGCCTaGCAGTCGCTGAAATTGTTGACTTCACTCATGTCG | + |
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Preference number: 6 (lower is better) Translates to: FTFFHRACLPRA*QSLKLLTSLMS Trigger: CGACATGAGTGAAGTCAACAATTTCAGCGACTGTCAGGCTCTTGGCAAGCAAGCCCGATGGAAGAATGTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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| CDS CAA 72 bp | TTAAGCTCTTTGCTTATTTCAACTACGCCCGTGTTATaGGACATGCAGCTGTCTATTTTGTTCCCTTCGTGG | + |
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Preference number: 6 (lower is better) Translates to: LSSLLISTTPVL*DMQLSILFPSW Trigger: CCACGAAGGGAACAAAATAGACAGCTGCATGTCCAATAACACGGGCGTAGTTGAAATAAGCAAAGAGCTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238409.2 |
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| CDS TCA 72 bp | GAATGTGCTCATTGTTACATTAACAAATGTCCCATTTaGGTCCATTGTGCCATTGAAGTAGGAAGTAGTGTT | + |
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Preference number: 6 (lower is better) Translates to: ECAHCYINKCPI*VHCAIEVGSSV Trigger: AACACTACTTCCTACTTCAATGGCACAATGGACTCAAATGGGACATTTGTTAATGTAACAATGAGCACATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 ENSMUST00000238483.2 |
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| CDS CAA 72 bp | ACCATATCTCCTTTTATAGGCAAGACAATCCTCCCCTaGATTGTCTCTTTGTCATACGTATTTGATATGTTT | + |
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Preference number: 6 (lower is better) Translates to: TISPFIGKTILP*IVSLSYVFDMF Trigger: AAACATATCAAATACGTATGACAAAGAGACAATCAAGGGGAGGATTGTCTTGCCTATAAAAGGAGATATGGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000066432.12 ENSMUST00000100069.9 |
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