Pregenerated sensors for SCN2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070304Ensembl transcript IDs: ENSMUST00000093855.4, ENSMUST00000170998.9
Found 182 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCGGCTTGGGGAGCCCACAACTCATCTCTCTACTCCTGGTTGGCTTaGTTGAAGGATGGGCAGTATTCACCTGCTCCAGGCACCCCGGTG | + |
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Preference number: 1 (lower is better) Translates to: PAWGAHNSSLYSWLA*LKDGQYSPAPGTPV Trigger: CACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCCCAAGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | CTTGGGGAGCCCACAACTCATCTCTCTACTCCTGGTTGGCTTGCTTaGAGGATGGGCAGTATTCACCTGCTCCAGGCACCCCGGTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: LGEPTTHLSTPGWLA*RMGSIHLLQAPRWS Trigger: AGACCACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR GCA 90 bp | TCTCTACTCCTGGTTGGCTTGCTTGAAGGATGGGCAGTATTCACCTaGTCCAGGCACCCCGGTGGTCTCACCCACTCCCATTGGCAGTGT | + |
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Preference number: 1 (lower is better) Translates to: SLLLVGLLEGWAVFT*SRHPGGLTHSHWQC Trigger: ACACTGCCAATGGGAGTGGGTGAGACCACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | GAGACCCTGGAGGAGGGTCCAAGTGGCTCCAAAAGAAAGTGCACATaGGGACAACTACCTGGGGCAGAAATGGCTCCTGACCCAGTCCAT | + |
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Preference number: 1 (lower is better) Translates to: ETLEEGPSGSKRKCT*GQLPGAEMAPDPVH Trigger: ATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGCCACTTGGACCCTCCTCCAGGGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR GCA 90 bp | CAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTaGTTTCCCTGGGCCTCATTCCGTCAGGGCAGAAAAGAAAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: QKWLLTQSMRSRGRH*FPWASFRQGRKEKD Trigger: GTCTTTTTCTTTTCTGCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | CCCATCCTGTCTTTGGGACCACACAAGTCTTTCTTCCTCAAAGACTaGCAGGCTACAGCCCTTCTCTGTTCTCCCTGGGACTCCCGAATC | + |
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Preference number: 1 (lower is better) Translates to: PILSLGPHKSFFLKD*QATALLCSPWDSRI Trigger: GATTCGGGAGTCCCAGGGAGAACAGAGAAGGGCTGTAGCCTGTCAGTCTTTGAGGAAGAAAGACTTGTGTGGTCCCAAAGACAGGATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR GCA 90 bp | GTTGGTCACTTGGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTGTaGCAGTTCTCTGAGCACGTCCCAACAGGATACTCTCCGATTAGC | + |
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Preference number: 1 (lower is better) Translates to: VGHLELQSPHLQEAL*QFSEHVPTGYSPIS Trigger: GCTAATCGGAGAGTATCCTGTTGGGACGTGCTCAGAGAACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CCA 90 bp | AGGCACCCCGGTGGTCTCACCCACTCCCATTGGCAGTGTGTTGTTTaGCAGTTAGGTACTGAGCCAAAGAGATTAGAACTTCCAGAAGGG | + |
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Preference number: 1 (lower is better) Translates to: RHPGGLTHSHWQCVV*QLGTEPKRLELPEG Trigger: CCCTTCTGGAAGTTCTAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAGTGGGTGAGACCACCGGGGTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CCA 90 bp | GTATTCACCTGCTCCAGGCACCCCGGTGGTCTCACCCACTCCCATTaGCAGTGTGTTGTTTGGCAGTTAGGTACTGAGCCAAAGAGATTA | + |
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Preference number: 1 (lower is better) Translates to: VFTCSRHPGGLTHSH*QCVVWQLGTEPKRL Trigger: TAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAGTGGGTGAGACCACCGGGGTGCCTGGAGCAGGTGAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CCA 90 bp | GCTCCAAAAGAAAGTGCACATGAGGACAACTACCTGGGGCAGAAATaGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: APKESAHEDNYLGQK*LLTQSMRSRGRHCF Trigger: AAAGCAATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CCA 90 bp | CTCCCATTTGATAAAGTGGGACTAGGTGATGAGTCTGCCCACAGCTaGAGGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGC | + |
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Preference number: 1 (lower is better) Translates to: LPFDKVGLGDESAHS*RGKQLFPKPVPRHR Trigger: GCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCCTCCAGCTGTGGGCAGACTCATCACCTAGTCCCACTTTATCAAATGGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | GCACCCTCACTTTCCCAAACCCCAGATTCAAGAGTCTCACCCTTCTaGGTCTCTTGTGGAAGCAGTGGCTATGGAGGTGGAAGTAGATGC | + |
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Preference number: 1 (lower is better) Translates to: APSLSQTPDSRVSPF*VSCGSSGYGGGSRC Trigger: GCATCTACTTCCACCTCCATAGCCACTGCTTCCACAAGAGACTCAGAAGGGTGAGACTCTTGAATCTGGGGTTTGGGAAAGTGAGGGTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CCA 90 bp | AAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTTaGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTGTGCCAGTTCT | + |
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Preference number: 1 (lower is better) Translates to: KEPEHGQCFQPLLVT*NFSLPICRRLCASS Trigger: AGAACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | CCAAGGCTTGAGGTTCTCCCACCAGGAAGCTCTATTTGTTCTAACTaGGGACCAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGT | + |
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Preference number: 1 (lower is better) Translates to: PRLEVLPPGSSICSN*GPRSQNMGNAFSLC Trigger: ACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAGTTAGAACAAATAGAGCTTCCTGGTGGGAGAACCTCAAGCCTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | CACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCTTTGTTCTCATaGGCTGAATCCCGCAGGTTGGCCAGCCAGCCTTTCTTTGCAGTG | + |
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Preference number: 1 (lower is better) Translates to: HRKALSVLKYCALFS*AESRRLASQPFFAV Trigger: CACTGCAAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAGCTCATGAGAACAAAGCACAATATTTCAGGACTGAAAGTGCCTTGCGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | TATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTaGAATATTGTGCTTTGTTCTCATGAGCTGAATCCCGCAGGTTGG | + |
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Preference number: 1 (lower is better) Translates to: YFQSQFQGTARHFQS*NIVLCSHELNPAGW Trigger: CCAACCTGCGGGATTCAGCTCATGAGAACAAAGCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | TCTCACCCACTCCCATTGGCAGTGTGTTGTTTGGCAGTTAGGTACTaGGCCAAAGAGATTAGAACTTCCAGAAGGGTTAGATTCCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: SHPLPLAVCCLAVRY*AKEIRTSRRVRFPL Trigger: TAAGGGGAATCTAACCCTTCTGGAAGTTCTAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAGTGGGTGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | TTCTTTGGACCTGGTTGGTATTTCCACCTATCTACCTGCTTAGCCTaGTCTTGTAGGTATGTAGCACTCCAACTTTCCCAAGGAGACTCA | + |
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Preference number: 1 (lower is better) Translates to: FFGPGWYFHLSTCLA*SCRYVALQLSQGDS Trigger: TGAGTCTCCTTGGGAAAGTTGGAGTGCTACATACCTACAAGATCAGGCTAAGCAGGTAGATAGGTGGAAATACCAACCAGGTCCAAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR TCA 90 bp | AGGCTCGCATCCAGAAACGACTCAGCCCTATCTTTCCTTTTTCCTTaGGTACCCTGGAAATGCACAGTCATCCCTTTAAATAGTGCTTTC | + |
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Preference number: 1 (lower is better) Translates to: RLASRNDSALSFLFP*VPWKCTVIPLNSAF Trigger: GAAAGCACTATTTAAAGGGATGACTGTGCATTTCCAGGGTACTCAAGGAAAAAGGAAAGATAGGGCTGAGTCGTTTCTGGATGCGAGCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCATTCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGGGGAGCGGGGCTAGATaGACCCCACCACTACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GSIQPGAALRAHTAAREQGSGAR*TPPLLC Trigger: GCACAGTAGTGGTGGGGTTCATCTAGCCCCGCTCCC...CTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGAATGCTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CAA 90 bp | GCCGGCTTGGGGAGCCCACAACTCATCTCTCTACTCCTGGTTGGCTaGCTTGAAGGATGGGCAGTATTCACCTGCTCCAGGCACCCCGGT | + |
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Preference number: 2 (lower is better) Translates to: AGLGSPQLISLLLVG*LEGWAVFTCSRHPG Trigger: ACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCCCAAGCCGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGTTTGCTGGACCTGGTCTACAAAGTaGGTGCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: SARSSAQSPHCSKRAVCWTWSTK*VPGQPG Trigger: CCCTGGCTGTCCTGGCACTCACTTTGTAGACCAGGT...CCAGCAAACTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | CCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGCCCGGGTGGAGGTGCCTCTaGTCAGCACAGAACCCCGCC | + |
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Preference number: 2 (lower is better) Translates to: PLTQEFSGWLSIIPYSMPGWRCL*SAQNPA Trigger: GGCGGGGTTCTGTGCTGACCAGAGGCACCTCCACCC...GGGCATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000093855.4 |
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| 3UTR CAA 90 bp | GCTTGGGGAGCCCACAACTCATCTCTCTACTCCTGGTTGGCTTGCTaGAAGGATGGGCAGTATTCACCTGCTCCAGGCACCCCGGTGGTC | + |
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Preference number: 2 (lower is better) Translates to: AWGAHNSSLYSWLAC*KDGQYSPAPGTPVV Trigger: GACCACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCCCAAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCCCTTCCCCCTCCCCTTaGACCCTCACTTTCCCAAAC | + |
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Preference number: 2 (lower is better) Translates to: EAGETESTVVEAFSQEQRPSPSP*TLTFPN Trigger: GTTTGGGAAAGTGAGGGTGCAAGGGGAGGGGGAAGG...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR GCA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCAACCTACCTGACCCCTaGACCCTTCCCAGCAGTACC | + |
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Preference number: 2 (lower is better) Translates to: EAGETESTVVEAFSQEQRNLPDP*TLPSST Trigger: GGTACTGCTGGGAAGGGTGCAGGGGTCAGGTAGGTT...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | GGAAGCATTCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGAACACATCCAAGGCTTaGGGTTCTCCCACCAGGAAG | + |
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Preference number: 2 (lower is better) Translates to: GSIQPGAALRAHTAAREQNTSKA*GSPTRK Trigger: CTTCCTGGTGGGAGAACCTCAAGCCTTGGATGTGTT...CTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGAATGCTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR GCA 90 bp | TACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTCCAGAGGCAGGCATTaGTTTCCCTGGGCCTCATTC | + |
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Preference number: 2 (lower is better) Translates to: YLGQKWLLTQSMRSRGRHSRGRH*FPWASF Trigger: GAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGA...ATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | CTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCACCCTTCCCGAGGGCGATCACCCTTaGTATAGGGGTGGGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LSIIPYSMPNLPDPCTLPEGDHP*YRGGGM Trigger: CATGCCCCCACCCCTATACCAAGGGTGATCGCCCTC...GGGAAGGGTGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | CTGGCTGGCTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCAGAGGGCGATCACCCTTaGTATAGGGGTGGGGGCATG | + |
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Preference number: 2 (lower is better) Translates to: LAGYPSFLTPCPTYLTPAEGDHP*YRGGGM Trigger: CATGCCCCCACCCCTATACCAAGGGTGATCGCCCTC...TGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAGCCAGCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | TACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTACCTGGGGCAGAAATaGCTCCTGACCCAGTCCATG | + |
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Preference number: 2 (lower is better) Translates to: YLGQKWLLTQSMRSRGRHYLGQK*LLTQSM Trigger: CATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA...ATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CAA 90 bp | TGTTCTCATGAGCTGAATCCCGCAGGTTGGCCAGCCAGCCTTTCTTaGCAGTGGCCCTTAATTAGCAGGCAGAGGCAGAGGGGGTGTGAG | + |
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Preference number: 2 (lower is better) Translates to: CSHELNPAGWPASLS*QWPLISRQRQRGCE Trigger: CTCACACCCCCTCTGCCTCTGCCTGCTAATTAAGGGCCACTGCAAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAGCTCATGAGAACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCCTGTCTTTGGGACCACACAAGTCTTTCTTCCTCAAAGACTGACAGGCTGGGGGCATGGGAAGTaGGGCCCCAGGTCGATTCTG | + |
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Preference number: 2 (lower is better) Translates to: PHPVFGTTQVFLPQRLTGWGHGK*GPRSIL Trigger: CAGAATCGACCTGGGGCCTCACTTCCCATGCCCCCA...GCCTGTCAGTCTTTGAGGAAGAAAGACTTGTGTGGTCCCAAAGACAGGATGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | CTGAGGACCAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTCCCAGTTCTGAGGGTTaGTGGCTGCTGCAGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: LRTKEPEHGQCFQPLLVTPSSEG*WLLQRP Trigger: TGGCCTCTGCAGCAGCCATCAACCCTCAGAACTGGG...AGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATTCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGTACCCAGGAGTTCTCTaGCTGGCTATCCATCATTCC | + |
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Preference number: 2 (lower is better) Translates to: GSIQPGAALRAHTAAREQYPGVL*LAIHHS Trigger: GGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTA...CTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGAATGCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCCTGTCTTTGGGACCACACAAGTCTTTCTTCCTCAAAGACTGACAGGCGTACAGGGCAGAGAGTaGGAGGAGATAGGGCACGGG | + |
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Preference number: 2 (lower is better) Translates to: PHPVFGTTQVFLPQRLTGVQGRE*EEIGHG Trigger: CCCGTGCCCTATCTCCTCTCACTCTCTGCCCTGTAC...GCCTGTCAGTCTTTGAGGAAGAAAGACTTGTGTGGTCCCAAAGACAGGATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | TCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCGGGAGCGGGGCTAGATaGACCCCACCACTACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: SKASSKAPQGTFSPEILCGSGAR*TPPLLC Trigger: GCACAGTAGTGGTGGGGTTCATCTAGCCCCGCTCCC...GCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR TCA 90 bp | TCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGTTTGCTGGGGTGAGCATCTTGTTTaGGAAGGCAGCCATGTGTAT | + |
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Preference number: 2 (lower is better) Translates to: SARSSAQSPHCSKRAVCWGEHLV*EGSHVY Trigger: ATACACATGGCTGCCTTCTCAAACAAGATGCTCACC...CCAGCAAACTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
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| 3UTR-3UTR GCA 90 bp | TGCAGTGAAGCCTGCACCCGGCAGTTCCTCACAGGTCTCTTAAGGGGCAGCCCTCGCCACCACACACACTaGTACTCCCACAGTTTAAAT | + |
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Preference number: 2 (lower is better) Translates to: CSEACTRQFLTGLLRGSPRHHTH*YSHSLN Trigger: ATTTAAACTGTGGGAGTAGCAGTGTGTGTGGTGGCG...AGGGCTGCCCCTTAAGAGACCTGTGAGGAACTGCCGGGTGCAGGCTTCACTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
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| 3UTR-3UTR GCA 90 bp | CCGCAAAAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCATGGGCAGTATTCACCTaGTCCAGGCACCCCGGTGGT | + |
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Preference number: 2 (lower is better) Translates to: PQKPSPLSVHCERRGHMPWAVFT*SRHPGG Trigger: ACCACCGGGGTGCCTGGAGCAGGTGAATACTGCCCA...TGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | GGAAGCATTCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGTGGCAGTGTGTTGTTTaGCAGTTAGGTACTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: GSIQPGAALRAHTAAREQWQCVV*QLGTEP Trigger: TGGCTCAGTACCTAACTGCCAAACAACACACTGCCA...CTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGAATGCTTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | CTACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATGGCAGTGTGTTGTTTaGCAGTTAGGTACTGAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LPGAEMAPDPVHEVQRQAWQCVV*QLGTEP Trigger: TGGCTCAGTACCTAACTGCCAAACAACACACTGCCA...TGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR-3UTR CCA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGAGGCATTGCTTTCCCTaGGCCTCATTCCGTCAGGGC | + |
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Preference number: 2 (lower is better) Translates to: GANSYFQSQFQGTARHFQRHCFP*ASFRQG Trigger: GCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCT...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| 3UTR CAA 90 bp | GCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATaGCTTTCCCTGGGCCTCATTCCGTCAGGGCAGAAAAGAAAAAGA | + |
|
Preference number: 2 (lower is better) Translates to: AEMAPDPVHEVQRQA*LSLGLIPSGQKRKR Trigger: TCTTTTTCTTTTCTGCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGAGAGGCAGGAGAGACTaGGAGCACTGTAGTGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GANSYFQSQFQGTARHFQRGRRD*EHCSGS Trigger: GCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTCT...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | CTGGCTGGCTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCAACCTTCATCTCCAGCTaGTGGCTGTTCCCTAGCCAT | + |
|
Preference number: 2 (lower is better) Translates to: LAGYPSFLTPCPTYLTPATFISS*WLFPSH Trigger: ATGGCTAGGGAACAGCCATCAGCTGGAGATGAAGGT...TGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAGCCAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | CAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTaGGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTGTGCCAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: QGARTWAMLSASVGH*ELQSPHLQEALCQF Trigger: GAACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | CTGAGGACCAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTaGGTCACTTGGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: LRTKEPEHGQCFQPL*VTWNFSLPICRRLC Trigger: ACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTGTACAGGGCAGAGAGTaGGAGGAGATAGGGCACGGG | + |
|
Preference number: 2 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTVQGRE*EEIGHG Trigger: CCCGTGCCCTATCTCCTCTCACTCTCTGCCCTGTAC...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | TTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTTGGGGGCATGGGAAGTaGGGCCCCAGGTCGATTCTG | + |
|
Preference number: 2 (lower is better) Translates to: FPKPVPRHRKALSVLKYCWGHGK*GPRSIL Trigger: CAGAATCGACCTGGGGCCTCACTTCCCATGCCCCCA...ACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | CCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGCCCAGAGTCTCACCCTTCTaGGTCTCTTGTGGAAGCAGT | + |
|
Preference number: 2 (lower is better) Translates to: PLTQEFSGWLSIIPYSMPRVSPF*VSCGSS Trigger: ACTGCTTCCACAAGAGACTCAGAAGGGTGAGACTCT...GGGCATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | TCAGCCAGGAGCAGCGCTCAGAGCCCACACTGCAGCAAGAGAGCAGTTTGCTGGTCTTTCCTTTTTCCTTaGGTACCCTGGAAATGCACA | + |
|
Preference number: 2 (lower is better) Translates to: SARSSAQSPHCSKRAVCWSFLFP*VPWKCT Trigger: TGTGCATTTCCAGGGTACTCAAGGAAAAAGGAAAGA...CCAGCAAACTGCTCTCTTGCTGCAGTGTGGGCTCTGAGCGCTGCTCCTGGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | ATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGAACCTACCTGACCCCTaGACCCTTCCCAGCAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: IPLTQEFSGWLSIIPYSMNLPDP*TLPSST Trigger: GGTACTGCTGGGAAGGGTGCAGGGGTCAGGTAGGTT...CATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTCCAAAAGAAAGTGCACATGAGGACAACTACCTGGGGCAGAAATGGCTCCAGGGTTGATGGCTGCTaGAGAGGCCAAGGTGAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: WLQKKVHMRTTTWGRNGSRVDGC*RGQGEH Trigger: ATGCTCACCTTGGCCTCTGCAGCAGCCATCAACCCT...GGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCACCCTTCCCCTTCTGAGTCTCTTGTaGAAGCAGTGGCTATGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: LSIIPYSMPNLPDPCTLPLLSLL*KQWLWR Trigger: CCTCCATAGCCACTGCTTCCACAAGAGACTCAGAAG...GGGAAGGGTGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | TCTGTTGGTCACTTGGAACTTCAGTCTCCCCATCTGCAGGAGGCTTaGTGCCAGTTCTCTGAGCACGTCCCAACAGGATACTCTCCGATT | + |
|
Preference number: 2 (lower is better) Translates to: SVGHLELQSPHLQEA*CQFSEHVPTGYSPI Trigger: AATCGGAGAGTATCCTGTTGGGACGTGCTCAGAGAACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | AGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCTAGTTTaGTTCCCAAGCACAAGCCCAGAGACCCTGGAGGAGGGTCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: RNISQFLTPSHRSLV*FPSTSPETLEEGPS Trigger: ACTTGGACCCTCCTCCAGGGTCTCTGGGCTTGTGCTTGGGAACAAAACTAGGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAATGGCTCCTGTAGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCAACACATCCAAGGCTTaGGGTTCTCCCACCAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: AMAPVGTSHSFSPHLTEANTSKA*GSPTRK Trigger: CTTCCTGGTGGGAGAACCTCAAGCCTTGGATGTGTT...GGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCTACAGGAGCCATTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGACCCCACCACTACTGTaGACAAAACACATCCAAGGC | + |
|
Preference number: 2 (lower is better) Translates to: GANSYFQSQFQGTARHFQTPPLL*TKHIQG Trigger: GCCTTGGATGTGTTTTGTGCACAGTAGTGGTGGGGT...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CTGAGGACCAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTCAAGGAGCCAGAACATaGGCAATGCTTTCAGCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: LRTKEPEHGQCFQPLLVTQGART*AMLSAS Trigger: AGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTG...AGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CCGCAAAAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGCTTGCTTGAAGGATaGGCAGTATTCACCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: PQKPSPLSVHCERRGHMPGLLEG*AVFTCS Trigger: GGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCC...TGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCCTGAATCCCGCAGGTTaGCCAGCCAGCCTTTCTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SKASSKAPQGTFSPEILCLNPAG*PASLSL Trigger: CAAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAG...GCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GCAATGGCTCCTGTAGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCGCTAAGAAGCAAGCTTaGGCAATGGCTCCTGTAGGA | + |
|
Preference number: 2 (lower is better) Translates to: AMAPVGTSHSFSPHLTEAAKKQA*AMAPVG Trigger: TCCTACAGGAGCCATTGCTCAAGCTTGCTTCTTAGC...GGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCTACAGGAGCCATTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGAGGACCAAGGAGCCAGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTCGCCACCACACACACTaGTACTCCCACAGTTTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: LRTKEPEHGQCFQPLLVTRHHTH*YSHSLN Trigger: ATTTAAACTGTGGGAGTAGCAGTGTGTGTGGTGGCG...AGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | TTATTAGTACAACCCTGTAGGGGGATTTCACAAGTAACCACCCACCCACCCAAACCTTCCCCCTCCCCTTaGACCCTCACTTTCCCAAAC | + |
|
Preference number: 2 (lower is better) Translates to: LLVQPCRGISQVTTHPPKPSPSP*TLTFPN Trigger: GTTTGGGAAAGTGAGGGTGCAAGGGGAGGGGGAAGG...TTTGGGTGGGTGGGTGGTTACTTGTGAAATCCCCCTACAGGGTTGTACTAATAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | CTGGCTGGCTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCACTTTCTCTTCCATCTTaGCAAAAGCCAGGCAGAGAA | + |
|
Preference number: 2 (lower is better) Translates to: LAGYPSFLTPCPTYLTPALSLPS*QKPGRE Trigger: TTCTCTGCCTGGCTTTTGGCAAGATGGAAGAGAAAG...TGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAGCCAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CCACCACACACACTGCTACTCCCACAGTTTAAATCGCCACCAGACCAAGCCTTACTTCTCTGTTCTCCCTaGGACTCCCGAATCTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PPHTLLLPQFKSPPDQALLLCSP*DSRISD Trigger: ATCTGAGATTCGGGAGTCCCAGGGAGAACAGAGAAG...TAAGGCTTGGTCTGGTGGCGATTTAAACTGTGGGAGTAGCAGTGTGTGTGGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CCCCATCCTGTCTTTGGGACCACACAAGTCTTTCTTCCTCAAAGACTGACAGGCCTTCTCTGTTCTCCCTaGGACTCCCGAATCTCAGAT | + |
|
Preference number: 2 (lower is better) Translates to: PHPVFGTTQVFLPQRLTGLLCSP*DSRISD Trigger: ATCTGAGATTCGGGAGTCCCAGGGAGAACAGAGAAG...GCCTGTCAGTCTTTGAGGAAGAAAGACTTGTGTGGTCCCAAAGACAGGATGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTAGGCATTGCTTTCCCTaGGCCTCATTCCGTCAGGGC | + |
|
Preference number: 2 (lower is better) Translates to: FPKPVPRHRKALSVLKYCRHCFP*ASFRQG Trigger: GCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCT...ACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | CCCACCCAAAAGATGTTAGAAGACCGTCCGCAAAAGCCAAGTCCCTaGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATGAA | + |
|
Preference number: 2 (lower is better) Translates to: PTQKMLEDRPQKPSP*SVHCERRGHMPGDE Trigger: TTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGGACGGTCTTCTAACATCTTTTGGGTGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | AAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATTTCTTCCTCAAAGACTaGCAGGCTACAGCCCTTCTC | + |
|
Preference number: 2 (lower is better) Translates to: KPSPLSVHCERRGHMPGDFFLKD*QATALL Trigger: GAGAAGGGCTGTAGCCTGTCAGTCTTTGAGGAAGAA...ATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTGGCTTACCACAGGAGTaGCTTTCTCCCGTACAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTGLPQE*LSPVQR Trigger: CCTTTGTACGGGAGAAAGTCACTCCTGTGGTAAGCC...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTTTCAGTCTCCCCATCTaGAGGAGGCTTTGTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTFSLPI*RRLCAS Trigger: ACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAA...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATTAGTACAACCCTGTAGGGGGATTTCACAAGTAACCACCCACCCACCCAAATACCTGGGGCAGAAATaGCTCCTGACCCAGTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LLVQPCRGISQVTTHPPKYLGQK*LLTQSM Trigger: CATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA...TTTGGGTGGGTGGGTGGTTACTTGTGAAATCCCCCTACAGGGTTGTACTAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATTAGTACAACCCTGTAGGGGGATTTCACAAGTAACCACCCACCCACCCAAAAACTCCCTGAGCTTGTaGGGGTTGAGTTCCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: LLVQPCRGISQVTTHPPKNSLSL*GLSSWK Trigger: CTTCCAGGAACTCAACCCCCACAAGCTCAGGGAGTT...TTTGGGTGGGTGGGTGGTTACTTGTGAAATCCCCCTACAGGGTTGTACTAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCCAGGAGTTCTCTGGCTaGCTATCCATCATTCCTTAC | + |
|
Preference number: 2 (lower is better) Translates to: SKASSKAPQGTFSPEILCQEFSG*LSIIPY Trigger: GTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTG...GCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR TCA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCGATTTGGCAGTCCCTaGCTCTGTTATGGCTTTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTRFGSP*LCYGFV Trigger: TACAAAGCCATAACAGAGTCAGGGACTGCCAAATCG...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCAAGTCCCTTGTCTGTaGACTGTGAAAGAAGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTQVPCL*TVKEED Trigger: GTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTG...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATGAAAACTGCTTTCAGCCTCTGTTaGTCACTTGGAACTTCAGTC | + |
|
Preference number: 2 (lower is better) Translates to: VPCLCTVKEEDTCQVMKTAFSLC*SLGTSV Trigger: GACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGC...AGTTTTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | GACACATGCCAGGTGATGAAAACTGGCCACTCAAAGCTGCAGAACTATATATACGGCTTGCTTGAAGGATaGGCAGTATTCACCTGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DTCQVMKTGHSKLQNYIYGLLEG*AVFTCS Trigger: GGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCC...GTATATATAGTTCTGCAGCTTTGAGTGGCCAGTTTTCATCACCTGGCATGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TGTAGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCTAGTTTTGTTCGGAGGAGGGTCCAAGTaGCTCCAAAAGAAAGTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: CRNISQFLTPSHRSLVLFGGGSK*LQKKVH Trigger: GTGCACTTTCTTTTGGAGCCACTTGGACCCTCCTCC...GAACAAAACTAGGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 90 bp | CACCATTGTCTCTTCGAGTGGCTATCTGATAAACAGAGGCAAGTATaGGTCCCTGAGACTGTCTTAGTCCTGTCTCCTACCACACTCTTT | + |
|
Preference number: 2 (lower is better) Translates to: HHCLFEWLSDKQRQV*VPETVLVLSPTTLF Trigger: AAAGAGTGTGGTAGGAGACAGGACTAAGACAGTCTCAGGGACCAATACTTGCCTCTGTTTATCAGATAGCCACTCGAAGAGACAATGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | GTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATGAAAACTAAAGAAGAGGACACATaGCAGGTGATGAAAACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: VPCLCTVKEEDTCQVMKTKEEDT*QVMKTG Trigger: GCCAGTTTTCATCACCTGGCATGTGTCCTCTTCTTT...AGTTTTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGCCTTTCTCCCATCTCTaGACTTATAACAAGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: GANSYFQSQFQGTARHFQPFSHL*TYNKFL Trigger: AAGAAACTTGTTATAAGTCCAGAGATGGGAGAAAGG...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | CAGTGTGTTGTTTGGCAGTTAGGTACTGAGCCAAAGAGATTAGAACTTCCAGAAAACTCCCTGAGCTTGTaGGGGTTGAGTTCCTGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: QCVVWQLGTEPKRLELPENSLSL*GLSSWK Trigger: CTTCCAGGAACTCAACCCCCACAAGCTCAGGGAGTT...TTCTGGAAGTTCTAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | ATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGCATTGTCTCTTCGAGTaGCTATCTGATAAACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: IPLTQEFSGWLSIIPYSMHCLFE*LSDKQR Trigger: CCTCTGTTTATCAGATAGCCACTCGAAGAGACAATG...CATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | GACACATGCCAGGTGATGAAAACTGGCCACTCAAAGCTGCAGAACTATATATACCAAGTCCCTTGTCTGTaGACTGTGAAAGAAGAGGAC | + |
|
Preference number: 2 (lower is better) Translates to: DTCQVMKTGHSKLQNYIYQVPCL*TVKEED Trigger: GTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTG...GTATATATAGTTCTGCAGCTTTGAGTGGCCAGTTTTCATCACCTGGCATGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | GCTTTGTGCCAGTTCTCTGAGCACGTCCCAACAGGATACTCTCCGATTAGCCATCCTTTCTCCCATCTCTaGACTTATAACAAGTTTCTT | + |
|
Preference number: 2 (lower is better) Translates to: ALCQFSEHVPTGYSPISHPFSHL*TYNKFL Trigger: AAGAAACTTGTTATAAGTCCAGAGATGGGAGAAAGG...ATGGCTAATCGGAGAGTATCCTGTTGGGACGTGCTCAGAGAACTGGCACAAAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | GTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATGAAAACTCATTGTCTCTTCGAGTaGCTATCTGATAAACAGAGG | + |
|
Preference number: 2 (lower is better) Translates to: VPCLCTVKEEDTCQVMKTHCLFE*LSDKQR Trigger: CCTCTGTTTATCAGATAGCCACTCGAAGAGACAATG...AGTTTTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CCA 90 bp | TTATTAGTACAACCCTGTAGGGGGATTTCACAAGTAACCACCCACCCACCCAAATCATCTCTCTACTCCTaGTTGGCTTGCTTGAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: LLVQPCRGISQVTTHPPKSSLYS*LACLKD Trigger: ATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGA...TTTGGGTGGGTGGGTGGTTACTTGTGAAATCCCCCTACAGGGTTGTACTAATAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTACCCTGCCTTTCTCCCATCTCTGGACTTATAACAAGTTTCTTATAATGATACTGCAGGAGGCTTTGTaGCAGTTCTCTGAGCACGTC | + |
|
Preference number: 2 (lower is better) Translates to: STLPFSHLWTYNKFLIMILQEAL*QFSEHV Trigger: GACGTGCTCAGAGAACTGGCACAAAGCCTCCTGCAG...TATCATTATAAGAAACTTGTTATAAGTCCAGAGATGGGAGAAAGGCAGGGTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | TCTACCCTGCCTTTCTCCCATCTCTGGACTTATAACAAGTTTCTTATAATGATATTCAGTCTCCCCATCTaGAGGAGGCTTTGTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: STLPFSHLWTYNKFLIMIFSLPI*RRLCAS Trigger: ACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAA...TATCATTATAAGAAACTTGTTATAAGTCCAGAGATGGGAGAAAGGCAGGGTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR GCA 90 bp | TTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGGAGGTGGAAGTAGATaGACCAAAATAATAACAATA | + |
|
Preference number: 2 (lower is better) Translates to: FPKPVPRHRKALSVLKYCGGGSR*TKIITI Trigger: TATTGTTATTATTTTGGTGCATCTACTTCCACCTCC...ACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CTGGTTGGCTTGCTTGAAGGATGGGCAGTATTCACCTaGTCCAGGCACCCCGGTGGTCTCACCCACTCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: LVGLLEGWAVFT*SRHPGGLTHSH Trigger: ATGGGAGTGGGTGAGACCACCGGGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTaGTTTCCCTGGGCCTCATTCCGTCAGGGCAGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: LLTQSMRSRGRH*FPWASFRQGRK Trigger: TTTTCTGCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | GGTGGGGGCATGGGAAGTGAGGCCCCAGGTCGATTCTaGGGTCCTATTCAAGAGAAGCACACCAAGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGGMGSEAPGRF*GPIQEKHTKRE Trigger: CTCTCTCTTGGTGTGCTTCTCTTGAATAGGACCCCAGAATCGACCTGGGGCCTCACTTCCCATGCCCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | TGCTCCAGGCACCCCGGTGGTCTCACCCACTCCCATTaGCAGTGTGTTGTTTGGCAGTTAGGTACTGAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: CSRHPGGLTHSH*QCVVWQLGTEP Trigger: TGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAGTGGGTGAGACCACCGGGGTGCCTGGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | AATCCCGCAGGTTGGCCAGCCAGCCTTTCTTTGCAGTaGCCCTTAATTAGCAGGCAGAGGCAGAGGGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: NPAGWPASLSLQ*PLISRQRQRGC Trigger: ACACCCCCTCTGCCTCTGCCTGCTAATTAAGGGCCACTGCAAAGAAAGGCTGGCTGGCCAACCTGCGGGATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGGCTGGCTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCAACCTTCCCCCTCCCCTaGCACCCTCACTTTCCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LAGYPSFLTPCPTYLTPATFPLP*HPHFPK Trigger: TTTGGGAAAGTGAGGGTGCAAGGGGAGGGGGAAGGT...TGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAGCCAGCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCCTACTCCTGGTTGGCTaGCTTGAAGGATGGGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: EAGETESTVVEAFSQEQRLLLVG*LEGWAV Trigger: TACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAG...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | CTACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCAGCTTTCTCTTCCATCTaGCCAAAAGCCAGGCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPGAEMAPDPVHEVQRQAAFSSI*PKARQR Trigger: TCTCTGCCTGGCTTTTGGCAAGATGGAAGAGAAAGC...TGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CCTCTGGTCAGCACAGAACCCCGCCACCACACACACTaGTACTCCCACAGTTTAAATCGCCACCAGACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: PLVSTEPRHHTH*YSHSLNRHQTK Trigger: CTTGGTCTGGTGGCGATTTAAACTGTGGGAGTAGCAGTGTGTGTGGTGGCGGGGTTCTGTGCTGACCAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CTGTTCCCTAGCCATCTTCACAAGTCATTCCCATGGTaGCTCTGGTCAGCACAGAACCCCGCCACCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LFPSHLHKSFPW*LWSAQNPATTH Trigger: GTGTGTGGTGGCGGGGTTCTGTGCTGACCAGAGGCACCATGGGAATGACTTGTGAAGATGGCTAGGGAACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | GAAAGTGCACATGAGGACAACTACCTGGGGCAGAAATaGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: ESAHEDNYLGQK*LLTQSMRSRGR Trigger: CCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | TGGCTGTTCCCTAGCCATCTTCACAAGTCATTCCCATaGTGCCTCTGGTCAGCACAGAACCCCGCCACCACA | + |
|
Preference number: 3 (lower is better) Translates to: WLFPSHLHKSFP*CLWSAQNPATT Trigger: TGTGGTGGCGGGGTTCTGTGCTGACCAGAGGCACCATGGGAATGACTTGTGAAGATGGCTAGGGAACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCTCCTGGTTGGCTTGCTaGAAGGATGGGCAGTATTCA | + |
|
Preference number: 3 (lower is better) Translates to: EAGETESTVVEAFSQEQRSWLAC*KDGQYS Trigger: TGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGA...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | CCCACAACTCATCTCTCTACTCCTGGTTGGCTTGCTTaGAGGATGGGCAGTATTCACCTGCTCCAGGCACCC | + |
|
Preference number: 3 (lower is better) Translates to: PTTHLSTPGWLA*RMGSIHLLQAP Trigger: GGGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CCTCTGTTGGTCACTTGGAACTTCAGTCTCCCCATCTaGAGGAGGCTTTGTGCCAGTTCTCTGAGCACGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PLLVTWNFSLPI*RRLCASSLSTS Trigger: GGACGTGCTCAGAGAACTGGCACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | TGTTTGAGAAGGCAGCCATGTGTATGCAGTGAAGCCTaGACCCGGCAGTTCCTCACAGGTCTCTTAAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: CLRRQPCVCSEA*TRQFLTGLLRG Trigger: GCCCCTTAAGAGACCTGTGAGGAACTGCCGGGTGCAGGCTTCACTGCATACACATGGCTGCCTTCTCAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | CCGGCTTGGGGAGCCCACAACTCATCTCTCTACTCCTaGTTGGCTTGCTTGAAGGATGGGCAGTATTCACCT | + |
|
Preference number: 3 (lower is better) Translates to: PAWGAHNSSLYS*LACLKDGQYSP Trigger: AGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCCCAAGCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTGCTTTCAGCCTCTGTaGGTCACTTGGAACTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: YLGQKWLLTQSMRSRGRHCFQPL*VTWNFS Trigger: ACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCA...ATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATCTGAGCTTGTGGGGGTaGAGTTCCTGGAAGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: KPSPLSVHCERRGHMPGDLSLWG*SSWKGS Trigger: GCTCCCCTTCCAGGAACTCAACCCCCACAAGCTCAG...ATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | GATGGCTGCTGCAGAGGCCAAGGTGAGCATCTTGTTTaGGAAGGCAGCCATGTGTATGCAGTGAAGCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: DGCCRGQGEHLV*EGSHVYAVKPA Trigger: TGCAGGCTTCACTGCATACACATGGCTGCCTTCTCAAACAAGATGCTCACCTTGGCCTCTGCAGCAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | CAGTCCATGAGGTCCAGAGGCAGGCATTGCTTTCCCTaGGCCTCATTCCGTCAGGGCAGAAAAGAAAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: QSMRSRGRHCFP*ASFRQGRKEKD Trigger: GTCTTTTTCTTTTCTGCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGACCTCATGGACTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | AAGCACAAGCCCAGAGACCCTGGAGGAGGGTCCAAGTaGCTCCAAAAGAAAGTGCACATGAGGACAACTACC | + |
|
Preference number: 3 (lower is better) Translates to: KHKPRDPGGGSK*LQKKVHMRTTT Trigger: GGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGCCACTTGGACCCTCCTCCAGGGTCTCTGGGCTTGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGCCAGCCAGCCTTTCTTaGCAGTGGCCCTTAATTAGC | + |
|
Preference number: 3 (lower is better) Translates to: GANSYFQSQFQGTARHFQPASLS*QWPLIS Trigger: GCTAATTAAGGGCCACTGCAAAGAAAGGCTGGCTGG...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCGCTGAATCCCGCAGGTaGGCCAGCCAGCCTTTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: SKASSKAPQGTFSPEILCAESRR*ASQPFF Trigger: AAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAGC...GCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | AGTAAAACGGCAGTGAATGTAGGCTTACCACAGGAGTaGCTTTCTCCCGTACAAAGGGAGTTCCGGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SKTAVNVGLPQE*LSPVQREFRGG Trigger: CCCACCCCGGAACTCCCTTTGTACGGGAGAAAGTCACTCCTGTGGTAAGCCTACATTCACTGCCGTTTTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | AGCATCTTGTTTGAGAAGGCAGCCATGTGTATGCAGTaGAGCCTGCACCCGGCAGTTCCTCACAGGTCTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SILFEKAAMCMQ*SLHPAVPHRSL Trigger: AAGAGACCTGTGAGGAACTGCCGGGTGCAGGCTTCACTGCATACACATGGCTGCCTTCTCAAACAAGATGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | ACAAACTGCTATAGAAATCCAGCCTGCCCCCGCAGCTaGGTCACAGAAGACCATTTAAGCTTCTCTCCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: TNCYRNPACPRS*VTEDHLSFSPL Trigger: GAGGGGAGAGAAGCTTAAATGGTCTTCTGTGACCCAGCTGCGGGGGCAGGCTGGATTTCTATAGCAGTTTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCCAAAAGAAAGTGCACATGAGGACAACTACCTGGGGCAGAAATGGCTCCGCCTCTGTTGGTCACTaGGAACTTCAGTCTCCCCAT | + |
|
Preference number: 3 (lower is better) Translates to: WLQKKVHMRTTTWGRNGSASVGH*ELQSPH Trigger: ATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGC...GGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCTCCAAAAGAAAGTGCACATGAGGACAACTACCTGGGGCAGAAATGGCTCCACCCTTCTGAGTCTCTaGTGGAAGCAGTGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: WLQKKVHMRTTTWGRNGSTLLSL*WKQWLW Trigger: CCATAGCCACTGCTTCCACAAGAGACTCAGAAGGGT...GGAGCCATTTCTGCCCCAGGTAGTTGTCCTCATGTGCACTTTCTTTTGGAGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | CTTTCCCAAACCCCAGATTCAAGAGTCTCACCCTTCTaGGTCTCTTGTGGAAGCAGTGGCTATGGAGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSQTPDSRVSPF*VSCGSSGYGGG Trigger: TCCACCTCCATAGCCACTGCTTCCACAAGAGACTCAGAAGGGTGAGACTCTTGAATCTGGGGTTTGGGAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | GTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATaGCAGGTGATGAAAACTGGCCACTCAAAGCTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VPCLCTVKEEDT*QVMKTGHSKLQ Trigger: CTGCAGCTTTGAGTGGCCAGTTTTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | GAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTTaGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: EHGQCFQPLLVT*NFSLPICRRLC Trigger: ACAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | CTCAAAGCTGCAGAACTATATATACACCACCACCCTTaGTTTCAGCCGGCTTGGGGAGCCCACAACTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: LKAAELYIHHHP*FQPAWGAHNSS Trigger: AGATGAGTTGTGGGCTCCCCAAGCCGGCTGAAACCAAGGGTGGTGGTGTATATATAGTTCTGCAGCTTTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | TTTACTTCTTTAAGGGACAGCTTAGCTGGGCGGTGGTaGTGTATGCCTTTAATCCCAGCACTTGGGAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: FTSLRDSLAGRW*CMPLIPALGRQ Trigger: CTGCCTCCCAAGTGCTGGGATTAAAGGCATACACCACCACCGCCCAGCTAAGCTGTCCCTTAAAGAAGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | GATAAAGTGGGACTAGGTGATGAGTCTGCCCACAGCTaGAGGGGCAAACAGCTATTTCCAAAGCCAGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: DKVGLGDESAHS*RGKQLFPKPVP Trigger: TGGAACTGGCTTTGGAAATAGCTGTTTGCCCCTCCAGCTGTGGGCAGACTCATCACCTAGTCCCACTTTATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTAGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCTAGTTTTGTTCGTCCAGAGGCAGGCATaGCTTTCCCTGGGCCTCATT | + |
|
Preference number: 3 (lower is better) Translates to: CRNISQFLTPSHRSLVLFVQRQA*LSLGLI Trigger: AATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGAC...GAACAAAACTAGGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | CTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCACCCTTCCCATCTTTCCTTTTTCCTaGAGTACCCTGGAAATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: LSIIPYSMPNLPDPCTLPIFPFS*STLEMH Trigger: GTGCATTTCCAGGGTACTCAAGGAAAAAGGAAAGAT...GGGAAGGGTGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | GAGGTTCTCCCACCAGGAAGCTCTATTTGTTCTAACTaGGGACCAAGGAGCCAGAACATGGGCAATGCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: EVLPPGSSICSN*GPRSQNMGNAF Trigger: GAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAGTTAGAACAAATAGAGCTTCCTGGTGGGAGAACCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | TTATTGCAGCCAATAGATCCAAGCAATCTGACAAACTaGTATAGAAATCCAGCCTGCCCCCGCAGCTGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: LLQPIDPSNLTN*YRNPACPRSWV Trigger: GACCCAGCTGCGGGGGCAGGCTGGATTTCTATAGCAGTTTGTCAGATTGCTTGGATCTATTGGCTGCAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTGCTGCTTTCAGCCTCTGTaGGTCACTTGGAACTTCAGT | + |
|
Preference number: 3 (lower is better) Translates to: SKASSKAPQGTFSPEILCCFQPL*VTWNFS Trigger: ACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCA...GCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | GCTTTGTGCCAGTTCTCTGAGCACGTCCCAACAGGATACTCTCCGATTAGCCATAAACAGAGGCAAGTATaGGTCCCTGAGACTGTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: ALCQFSEHVPTGYSPISHKQRQV*VPETVL Trigger: TAAGACAGTCTCAGGGACCAATACTTGCCTCTGTTT...ATGGCTAATCGGAGAGTATCCTGTTGGGACGTGCTCAGAGAACTGGCACAAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTACCCTTCTGAGTCTCTaGTGGAAGCAGTGGCTATGG | + |
|
Preference number: 3 (lower is better) Translates to: FPKPVPRHRKALSVLKYCTLLSL*WKQWLW Trigger: CCATAGCCACTGCTTCCACAAGAGACTCAGAAGGGT...ACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | TTCAGTCCTGAAATATTGTGCTTTGTTCTCATGAGCTaGATCCCGCAGGTTGGCCAGCCAGCCTTTCTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FSPEILCFVLMS*IPQVGQPAFLC Trigger: GCAAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAGCTCATGAGAACAAAGCACAATATTTCAGGACTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | AGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTaGAATATTGTGCTTTGTTCTCATGAGCTGAATCCC | + |
|
Preference number: 3 (lower is better) Translates to: SQFQGTARHFQS*NIVLCSHELNP Trigger: GGGATTCAGCTCATGAGAACAAAGCACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | GGTGGTCTCACCCACTCCCATTGGCAGTGTGTTGTTTaGCAGTTAGGTACTGAGCCAAAGAGATTAGAACTT | + |
|
Preference number: 3 (lower is better) Translates to: GGLTHSHWQCVV*QLGTEPKRLEL Trigger: AAGTTCTAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAGTGGGTGAGACCACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | GACACATGCCAGGTGATGAAAACTGGCCACTCAAAGCTGCAGAACTATATATACGCCAAGGTGAGCATCTaGTTTGAGAAGGCAGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: DTCQVMKTGHSKLQNYIYAKVSI*FEKAAM Trigger: CATGGCTGCCTTCTCAAACAAGATGCTCACCTTGGC...GTATATATAGTTCTGCAGCTTTGAGTGGCCAGTTTTCATCACCTGGCATGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTACCCTGCCTTTCTCCCATCTCTGGACTTATAACAAGTTTCTTATAATGATACTGAGCTTGTGGGGGTaGAGTTCCTGGAAGGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: STLPFSHLWTYNKFLIMILSLWG*SSWKGS Trigger: GCTCCCCTTCCAGGAACTCAACCCCCACAAGCTCAG...TATCATTATAAGAAACTTGTTATAAGTCCAGAGATGGGAGAAAGGCAGGGTAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CCA 72 bp | CTATTTGTTCTAACTGAGGACCAAGGAGCCAGAACATaGGCAATGCTTTCAGCCTCTGTTGGTCACTTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: LFVLTEDQGART*AMLSASVGHLE Trigger: TTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCTGGCTCCTTGGTCCTCAGTTAGAACAAATAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | CTCCCATTGGCAGTGTGTTGTTTGGCAGTTAGGTACTaGGCCAAAGAGATTAGAACTTCCAGAAGGGTTAGA | + |
|
Preference number: 3 (lower is better) Translates to: LPLAVCCLAVRY*AKEIRTSRRVR Trigger: TCTAACCCTTCTGGAAGTTCTAATCTCTTTGGCTCAGTACCTAACTGCCAAACAACACACTGCCAATGGGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR TCA 72 bp | CATAATGAACCTTTGGTACTTGGAAACACTGAGAGGTaGTTTCACCCTCCACCCCACAGTGTAACTTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: HNEPLVLGNTER*FHPPPHSVTFG Trigger: CCCAAAAGTTACACTGTGGGGTGGAGGGTGAAATCACCTCTCAGTGTTTCCAAGTACCAAAGGTTCATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR GCA 72 bp | CTCATATTTAAAGCGTTCCAGCTTTCTCTTCCATCTTaGCAAAAGCCAGGCAGAGAAACCCTGCTCGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LIFKAFQLSLPS*QKPGRETLLEN Trigger: ATTTTCGAGCAGGGTTTCTCTGCCTGGCTTTTGGCAAGATGGAAGAGAAAGCTGGAACGCTTTAAATATGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CAGATGAAAGGGAGGGCGATCACCCTTGGTATAGGGGTGGGGGCATGGGAAGTGCGGTGTAGCAGGAGTTaGAGGTACAGGGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: QMKGRAITLGIGVGAWEVRCSRS*RYRAGG Trigger: CCCGCCTGCCCTGTACCTTCAACTCCTGCTACACCG...CACTTCCCATGCCCCCACCCCTATACCAAGGGTGATCGCCCTCCCTTTCATCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGCCCCTGAGGCACCCACGATaGCCGCCACCGTGGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLTQEFSGWLSIIPYSMPLRHPR*PPPWSP Trigger: GGGACTCCACGGTGGCGGTCATCGTGGGTGCCTCAG...GGGCATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CAGATGAAAGGGAGGGCGATCACCCTTGGTATAGGGGTGGGGGCATGGGAAGTGCTTACTGGGGTTCCCTaGGAACTCCACGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QMKGRAITLGIGVGAWEVLTGVP*ELHAVS Trigger: GGAGACCGCGTGGAGTTCTCAGGGAACCCCAGTAAG...CACTTCCCATGCCCCCACCCCTATACCAAGGGTGATCGCCCTCCCTTTCATCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | GCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATaGCTTTCCCTGGGCCTCATTCCGTCAGGGCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: APDPVHEVQRQA*LSLGLIPSGQK Trigger: TTTCTGCCCTGACGGAATGAGGCCCAGGGAAAGCAATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | GAGCTGAATCCCGCAGGTTGGCCAGCCAGCCTTTCTTaGCAGTGGCCCTTAATTAGCAGGCAGAGGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ELNPAGWPASLS*QWPLISRQRQR Trigger: CCTCTGCCTCTGCCTGCTAATTAAGGGCCACTGCAAAGAAAGGCTGGCTGGCCAACCTGCGGGATTCAGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CCCCATCCTGTCTTTGGGACCACACAAGTCTTTCTTCCTCAAAGACTGACAGGCCGGTGTAGCAGGAGTTaGAGGTACAGGGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PHPVFGTTQVFLPQRLTGRCSRS*RYRAGG Trigger: CCCGCCTGCCCTGTACCTTCAACTCCTGCTACACCG...GCCTGTCAGTCTTTGAGGAAGAAAGACTTGTGTGGTCCCAAAGACAGGATGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CTATCCATCATTCCTTACTCCATGCCCAACCTACCTGACCCCTGCACCCTTCCCCCATCAGCACCAAGATaGCCACAGCCAGGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSIIPYSMPNLPDPCTLPPSAPR*PQPGNP Trigger: GGGGTTTCCTGGCTGTGGTCATCTTGGTGCTGATGG...GGGAAGGGTGCAGGGGTCAGGTAGGTTGGGCATGGAGTAAGGAATGATGGATAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | CCGCAAAAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCACTTACTGGGGTTCCCTaGGAACTCCACGCGGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PQKPSPLSVHCERRGHMPLTGVP*ELHAVS Trigger: GGAGACCGCGTGGAGTTCTCAGGGAACCCCAGTAAG...TGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CCA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCACACGTCGTACTTACTaGGGTTCCCTGAGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EAGETESTVVEAFSQEQRTRRTY*GSLRTP Trigger: TGGAGTTCTCAGGGAACCCCAGTAAGTACGACGTGT...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | GCCCACAACTCATCTCTCTACTCCTGGTTGGCTTGCTaGAAGGATGGGCAGTATTCACCTGCTCCAGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: AHNSSLYSWLAC*KDGQYSPAPGT Trigger: GGTGCCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | GGGAGCCCACAACTCATCTCTCTACTCCTGGTTGGCTaGCTTGAAGGATGGGCAGTATTCACCTGCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSPQLISLLLVG*LEGWAVFTCSR Trigger: CCTGGAGCAGGTGAATACTGCCCATCCTTCAAGCAAGCCAACCAGGAGTAGAGAGATGAGTTGTGGGCTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR GCA 90 bp | CTACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATCTTCAGGTCATCCGTaGTCAGCTTCTGCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LPGAEMAPDPVHEVQRQASSGHP*SASALF Trigger: AAAAAGAGCAGAAGCTGAGCACGGATGACCTGAAGA...TGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCGGAACATCTCCTCTGTaGAATTGTTACACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: EAGETESTVVEAFSQEQRGTSPL*NCYTPG Trigger: ACCAGGAGTGTAACAATTGCACAGAGGAGATGTTCC...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR GCA 90 bp | TACCTGGGGCAGAAATGGCTCCTGACCCAGTCCATGAGGTCCAGAGGCAGGCATTCTTCAGGTCATCCGTaGTCAGCTTCTGCTCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: YLGQKWLLTQSMRSRGRHSSGHP*SASALF Trigger: AAAAAGAGCAGAAGCTGAGCACGGATGACCTGAAGA...ATGCCTGCCTCTGGACCTCATGGACTGGGTCAGGAGCCATTTCTGCCCCAGGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | TCACAGTTTCTCACCCCATCTCACAGAAGCCTAGTTTaGTTCCCAAGCACAAGCCCAGAGACCCTGGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SQFLTPSHRSLV*FPSTSPETLEE Trigger: CTCCTCCAGGGTCTCTGGGCTTGTGCTTGGGAACAAAACTAGGCTTCTGTGAGATGGGGTGAGAAACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGTCCTGAAATATTGTCCATCAGCACCAAGATaGCCACAGCCAGGAAACCCC | + |
|
Preference number: 4 (lower is better) Translates to: FPKPVPRHRKALSVLKYCPSAPR*PQPGNP Trigger: GGGGTTTCCTGGCTGTGGTCATCTTGGTGCTGATGG...ACAATATTTCAGGACTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | AGAACATGGGCAATGCTTTCAGCCTCTGTTGGTCACTaGGAACTTCAGTCTCCCCATCTGCAGGAGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RTWAMLSASVGH*ELQSPHLQEAL Trigger: CAAAGCCTCCTGCAGATGGGGAGACTGAAGTTCCAAGTGACCAACAGAGGCTGAAAGCATTGCCCATGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR GCA 90 bp | GCAATGGCTCCTGTAGGAACATCTCACAGTTTCTCACCCCATCTCACAGAAGCCCCTCACCATCCATCTTaGCTTCCTCTTCAGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AMAPVGTSHSFSPHLTEAPHHPS*LPLQSS Trigger: TGAAGACTGAAGAGGAAGGCAAGATGGATGGTGAGG...GGCTTCTGTGAGATGGGGTGAGAAACTGTGAGATGTTCCTACAGGAGCCATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR GCA 90 bp | CCACCACACACACTGCTACTCCCACAGTTTAAATCGCCACCAGACCAAGCCTTAGGAACATCTCCTCTGTaGAATTGTTACACTCCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PPHTLLLPQFKSPPDQALGTSPL*NCYTPG Trigger: ACCAGGAGTGTAACAATTGCACAGAGGAGATGTTCC...TAAGGCTTGGTCTGGTGGCGATTTAAACTGTGGGAGTAGCAGTGTGTGTGGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CCA 90 bp | GTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCAGGTGATGAAAACTACACGTCGTACTTACTaGGGTTCCCTGAGAACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: VPCLCTVKEEDTCQVMKTTRRTY*GSLRTP Trigger: TGGAGTTCTCAGGGAACCCCAGTAAGTACGACGTGT...AGTTTTCATCACCTGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | ACCCCACCACTACTGTGCACAAAACACATCCAAGGCTaGAGGTTCTCCCACCAGGAAGCTCTATTTGTTCTA | + |
|
Preference number: 4 (lower is better) Translates to: TPPLLCTKHIQG*RFSHQEALFVL Trigger: TAGAACAAATAGAGCTTCCTGGTGGGAGAACCTCAAGCCTTGGATGTGTTTTGTGCACAGTAGTGGTGGGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | CTCTTCGAGTGGCTATCTGATAAACAGAGGCAAGTATaGGTCCCTGAGACTGTCTTAGTCCTGTCTCCTACC | + |
|
Preference number: 4 (lower is better) Translates to: LFEWLSDKQRQV*VPETVLVLSPT Trigger: GGTAGGAGACAGGACTAAGACAGTCTCAGGGACCAATACTTGCCTCTGTTTATCAGATAGCCACTCGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | AAGATGTTAGAAGACCGTCCGCAAAAGCCAAGTCCCTaGTCTGTGCACTGTGAAAGAAGAGGACACATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KMLEDRPQKPSP*SVHCERRGHMP Trigger: TGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGGACGGTCTTCTAACATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | GCACCAAGCCATTCCTATGGCCTGGGATTAACTTCTTaGGACCTGGTTGGTATTTCCACCTATCTACCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: APSHSYGLGLTS*DLVGISTYLPA Trigger: AGCAGGTAGATAGGTGGAAATACCAACCAGGTCCAAAGAAGTTAATCCCAGGCCATAGGAATGGCTTGGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | AAGCATAAAGAACATTCCATAATGAACCTTTGGTACTaGGAAACACTGAGAGGTGATTTCACCCTCCACCCC | + |
|
Preference number: 4 (lower is better) Translates to: KHKEHSIMNLWY*ETLRGDFTLHP Trigger: GGGGTGGAGGGTGAAATCACCTCTCAGTGTTTCCAAGTACCAAAGGTTCATTATGGAATGTTCTTTATGCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| 3UTR CAA 72 bp | ATCCAGAAACGACTCAGCCCTATCTTTCCTTTTTCCTaGAGTACCCTGGAAATGCACAGTCATCCCTTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IQKRLSPIFPFS*STLEMHSHPFK Trigger: TTTAAAGGGATGACTGTGCATTTCCAGGGTACTCAAGGAAAAAGGAAAGATAGGGCTGAGTCGTTTCTGGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | GAGGCAGGAGAGACTGAGAGCACTGTAGTGGAAGCATTCAGCCAGGAGCAGCGCTTCCTCCTCACACATTaGACCACCATCAGCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: EAGETESTVVEAFSQEQRFLLTH*TTISTK Trigger: CTTGGTGCTGATGGTGGTCAAATGTGTGAGGAGGAA...GCGCTGCTCCTGGCTGAATGCTTCCACTACAGTGCTCTCAGTCTCTCCTGCCTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | GGGGCAAACAGCTATTTCCAAAGCCAGTTCCAAGGCACCGCAAGGCACTTTCAGGTGCCATCTTCCGCGTaGCCCTCACCATCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GANSYFQSQFQGTARHFQVPSSA*PSPSIL Trigger: CAAGATGGATGGTGAGGGCAACGCGGAAGATGGCAC...CTGAAAGTGCCTTGCGGTGCCTTGGAACTGGCTTTGGAAATAGCTGTTTGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS CCA 90 bp | CTTCTAGCTGCACGTTCTTTAGAGTCACTGACACGTCGTACTTACTaGGGTTCCCTGAGAACTCCACGCGGTCTCCAAACCGCTCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LLAARSLESLTRRTY*GSLRTPRGLQTAPA Trigger: AGCTGGAGCGGTTTGGAGACCGCGTGGAGTTCTCAGGGAACCCCAGTAAGTACGACGTGTCAGTGACTCTAAAGAACGTGCAGCTAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | CCGCAAAAGCCAAGTCCCTTGTCTGTGCACTGTGAAAGAAGAGGACACATGCCACGGGTATCGGACCCATaGAGGACACTAAGAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQKPSPLSVHCERRGHMPRVSDP*RTLRVV Trigger: CACCACTCTTAGTGTCCTCAATGGGTCCGATACCCG...TGGCATGTGTCCTCTTCTTTCACAGTGCACAGACAAGGGACTTGGCTTTTGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | CCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTCCATGCCCTTCCTCCTCACACATTaGACCACCATCAGCACCAAG | + |
|
Preference number: 5 (lower is better) Translates to: PLTQEFSGWLSIIPYSMPFLLTH*TTISTK Trigger: CTTGGTGCTGATGGTGGTCAAATGTGTGAGGAGGAA...GGGCATGGAGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | GCTTTGTGCCAGTTCTCTGAGCACGTCCCAACAGGATACTCTCCGATTAGCCATCCCTCACCATCCATCTaGCCTTCCTCTTCAGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: ALCQFSEHVPTGYSPISHPSPSI*PSSSVF Trigger: GAAGACTGAAGAGGAAGGCAAGATGGATGGTGAGGG...ATGGCTAATCGGAGAGTATCCTGTTGGGACGTGCTCAGAGAACTGGCACAAAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | GTTAGATTCCCCTTACCCAGGAGTTCTCTGGCTGGCTATCCATCATTCCTTACTGTGCCATCTTCCGCGTaGCCCTCACCATCCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: VRFPLPRSSLAGYPSFLTVPSSA*PSPSIL Trigger: CAAGATGGATGGTGAGGGCAACGCGGAAGATGGCAC...AGTAAGGAATGATGGATAGCCAGCCAGAGAACTCCTGGGTAAGGGGAATCTAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS-3UTR CAA 90 bp | TTATTAGTACAACCCTGTAGGGGGATTTCACAAGTAACCACCCACCCACCCAAACGGGTATCGGACCCATaGAGGACACTAAGAGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLVQPCRGISQVTTHPPKRVSDP*RTLRVV Trigger: CACCACTCTTAGTGTCCTCAATGGGTCCGATACCCG...TTTGGGTGGGTGGGTGGTTACTTGTGAAATCCCCCTACAGGGTTGTACTAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS CAA 72 bp | GAGTTGAAGGTACAGGGCAGGCGGGTATCGGACCCATaGAGGACACTAAGAGTGGTGGGCGCTGTGACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: ELKVQGRRVSDP*RTLRVVGAVTS Trigger: GGAAGTCACAGCGCCCACCACTCTTAGTGTCCTCAATGGGTCCGATACCCGCCTGCCCTGTACCTTCAACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
||
| CDS GCA 72 bp | TGGTGCCATCTTCCGCGTTGCCCTCACCATCCATCTTaGCTTCCTCTTCAGTCTTCAGGTCATCCGTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: WCHLPRCPHHPS*LPLQSSGHPCS Trigger: TGAGCACGGATGACCTGAAGACTGAAGAGGAAGGCAAGATGGATGGTGAGGGCAACGCGGAAGATGGCACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| CDS CAA 72 bp | TTGGTGCCATCTTCCGCGTTGCCCTCACCATCCATCTaGCCTTCCTCTTCAGTCTTCAGGTCATCCGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LVPSSALPSPSI*PSSSVFRSSVL Trigger: GAGCACGGATGACCTGAAGACTGAAGAGGAAGGCAAGATGGATGGTGAGGGCAACGCGGAAGATGGCACCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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| CDS CCA 72 bp | GCACGTTCTTTAGAGTCACTGACACGTCGTACTTACTaGGGTTCCCTGAGAACTCCACGCGGTCTCCAAACC | + |
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Preference number: 6 (lower is better) Translates to: ARSLESLTRRTY*GSLRTPRGLQT Trigger: GGTTTGGAGACCGCGTGGAGTTCTCAGGGAACCCCAGTAAGTACGACGTGTCAGTGACTCTAAAGAACGTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093855.4 ENSMUST00000170998.9 |
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