Pregenerated sensors for SCMH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000000085Ensembl transcript IDs: ENSMUST00000000087.13, ENSMUST00000064991.13, ENSMUST00000106298.10, ENSMUST00000106301.8, ENSMUST00000122860.2
Found 295 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTaGGTACCAGGGCCTTTCAAGGTCCTAGGGCTGGCGTCTTCCTCA | + |
|
Preference number: 1 (lower is better) Translates to: GALGHYAKPRRWQGA*VPGPFKVLGLASSS Trigger: TGAGGAAGACGCCAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR CCA 90 bp | AGGCATGAGCTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTaGCAAGGGGCCTGGGTACCAGGGCCTTTCAAGGTCCTAGGGCTG | + |
|
Preference number: 1 (lower is better) Translates to: RHELGALGHYAKPRR*QGAWVPGPFKVLGL Trigger: CAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCTCATGCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR TCA 90 bp | GGTCTGCACCATAAGTTCAGAGTCTGGGGATCCAGTGAGAAGGCATaGGCTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCA | + |
|
Preference number: 1 (lower is better) Translates to: GLHHKFRVWGSSEKA*AGGLGTLCQAQEVA Trigger: TGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCTCATGCCTTCTCACTGGATCCCCAGACTCTGAACTTATGGTGCAGACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR CCA 90 bp | AGCTGTGGGGGCAGGGAGAGGGGAAACTCCATCAGAGATGAAGACTaGGGCTACAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTT | + |
|
Preference number: 1 (lower is better) Translates to: SCGGRERGNSIRDED*GYKGPSVGRETLTF Trigger: AAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTGTAGCCCCAGTCTTCATCTCTGATGGAGTTTCCCCTCTCCCTGCCCCCACAGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR GCA 90 bp | TGGGGCTACAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTTaGTCAGTGAGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: WGYKGPSVGRETLTF*SVSQILCPFQRRSA Trigger: GGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTGTAGCCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAAGCCTCCTAGAGTCCTaGGGTCACCCAGAGCCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: STGASRGQNSSSLEVLLPSLLES*GHPEPY Trigger: GTAGGGCTCTGGGTGACCTCAGGACTCTAGGAGGCT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGATGAGCTGGGGGCCTTaGGACACTATGCCAAGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: ALGPIFCSNSDQGRELWGMSWGP*DTMPSP Trigger: TGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCTCAT...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | ACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGAGCCAAATACTTTGTGGCGGGCGGCTTCCTaGGAGAAGAGTGCCTCCTGT | + |
|
Preference number: 2 (lower is better) Translates to: TQCRKRDPHLLLSEPNTLWRAAS*EKSASC Trigger: ACAGGAGGCACTCTTCTCCCAGGAAGCCGCCCGCCA...CAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATAAGTTCAGAGTCTaGGGATCCAGTGAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: KAQELAEGRTPPALRSSSHKFRV*GSSEKA Trigger: TGCCTTCTCACTGGATCCCCAGACTCTGAACTTATG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGATCAGAGATGAAGACTaGGGCTACAAAGGACCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: ALGPIFCSNSDQGRELWGIRDED*GYKGPS Trigger: ACTGGGTCCTTTGTAGCCCCAGTCTTCATCTCTGAT...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| 3UTR-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGAGACCCTCACCTTTTaGTCAGTGAGCCAAATACTT | + |
|
Preference number: 2 (lower is better) Translates to: KAQELAEGRTPPALRSSSETLTF*SVSQIL Trigger: AAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGAGGTGGCAAGGGGCCTaGGTACCAGGGCCTTTCAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQILCPFQRRSALGQCLLRWQGA*VPGPFK Trigger: CTTGAAAGGCCCTGGTACCCAGGCCCCTTGCCACCT...CAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR CAA 90 bp | CTGGGGCTACAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTaGCTCAGTGAGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGC | + |
|
Preference number: 2 (lower is better) Translates to: LGLQRTQCRKRDPHL*LSEPNTLSIPEKKC Trigger: GCACTTCTTCTCTGGAATGGACAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTGTAGCCCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR CAA 90 bp | TGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGAGCCAAATACTTaGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGAA | + |
|
Preference number: 2 (lower is better) Translates to: CRKRDPHLLLSEPNT*SIPEKKCPRAVSSE Trigger: TTCAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR-3UTR CCA 90 bp | AGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGCTTGTGGAGAGAGGCTaGCTAGCCTTGAGAAATAAA | + |
|
Preference number: 2 (lower is better) Translates to: SQILCPFQRRSALGQCLLLVERG*LALRNK Trigger: TTTATTTCTCAAGGCTAGCCAGCCTCTCTCCACAAG...CAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR CCA 72 bp | GAGGTCACCCAGAGCCCTACTAAGGTGCCTGGGAGCTaGCGGGCGGCTTCCTGGGAGAAGAGTGCCTCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EVTQSPTKVPGS*RAASWEKSASC Trigger: ACAGGAGGCACTCTTCTCCCAGGAAGCCGCCCGCCAGCTCCCAGGCACCTTAGTAGGGCTCTGGGTGACCTC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| 3UTR GCA 72 bp | AAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTTaGTCAGTGAGCCAAATACTTTGTCCATTCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KGPSVGRETLTF*SVSQILCPFQR Trigger: TCTCTGGAATGGACAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCGGGGGCCTGCATGGCTaGACTTGGGACGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTGGLHG*TWDGGS Trigger: GCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCC...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGGGGGCCTGCATGGCTaGACTTGGGACGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRGGLHG*TWDGGS Trigger: GCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCATCCTCCACTGTCCATaGGGAGGGGTCCCGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTILHCP*GGVPAT Trigger: AGTGGCCGGGACCCCTCCTCATGGACAGTGGAGGAT...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGGTGCTGGTTGTTGGTaGGGTGGGTGGTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRGAGCW*GGWWAQ Trigger: CTGAGCCCACCACCCACCTCACCAACAACCAGCACC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAGGGGGCCTGCATGGCTaGACTTGGGACGGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPGGLHG*TWDGGS Trigger: GCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCC...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTGTGAAAGGAGAGCTTaGGGGCGGGCCCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTCERRA*GRAPAS Trigger: TGAAGCTGGGGCCCGCCCTCAAGCTCTCCTTTCACA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCGCTTCTTTCCTGGTTTaGGGCCCCTCTGCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTASFLV*GPSALA Trigger: AGCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGC...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CCTGAGGTCACCCAGAGCCCTACTAAGGTGCCTGGGAGCTGGCGGGCGGCTTCCCAAACTGTGGGGGCCTaGATGGCTGAACTTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: PEVTQSPTKVPGSWRAASQTVGA*MAELGT Trigger: CGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTG...GGAAGCCGCCCGCCAGCTCCCAGGCACCTTAGTAGGGCTCTGGGTGACCTCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGCCTGGACAGCCTGCTaGAGCACCACAGAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLAWTAC*STTEAR Trigger: CCGTGCCTCTGTGGTGCTGCAGCAGGCTGTCCAGGC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCTGTGGGGGCCTGCATaGCTGAACTTGGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRLWGPA*LNLGRW Trigger: CCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCCCCCTCTGCCCTGGCTaGTGCTCCAAGACAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTPLCPG*CSKTVL Trigger: CAAAACTGTCTTGGAGCATCAGCCAGGGCAGAGGGG...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCACGGTGGCAGCATCTTaGGGAACAGTGCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTTVAAS*GTVLVS Trigger: GGACACCAGCACTGTTCCTCAAGATGCTGCCACCGT...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGGTGGGGGCCCGTGCTaGCGCTCTTGTTCAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRGGGPC*RSCSSR Trigger: TCTACTTGAACAAGAGCGGCAGCACGGGCCCCCACC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTACTGTGGGGGCCTGCATaGCTGAACTTGGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLLWGPA*LNLGRW Trigger: CCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAG...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCACAGAGGCACGGGCTaGCCCAAAATGGTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRHRGTG*PKMVRE Trigger: CTCCCTGACCATTTTGGGCCAGCCCGTGCCTCTGTG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTGGAGAGGCCCTCTCTaGACCAGAGGATGGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRWRGPL*TRGWSP Trigger: GGGAGACCATCCTCTGGTCCAGAGAGGGCCTCTCCA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCCCCTCTGCCCTGGCTaGTGCTCCAAGACAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRPLCPG*CSKTVL Trigger: CAAAACTGTCTTGGAGCATCAGCCAGGGCAGAGGGG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGCTTCTTTCCTGGTTTaGGGCCCCTCTGCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLASFLV*GPSALA Trigger: AGCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCCATCTTGAGGAACAGTaGTGGTGTCCGGTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTHLEEQ*WCPVQG Trigger: CCCCTGAACCGGACACCAGCACTGTTCCTCAAGATG...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCAGGTGGGGGCCCGTaGTGCCGCTCTTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPPGGGP*CRSCSS Trigger: ACTTGAACAAGAGCGGCAGCACGGGCCCCCACCTGG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTACAAGCCTGGACAGCCTaGTGCAGCACCACAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLQAWTA*CSTTEA Trigger: TGCCTCTGTGGTGCTGCAGCAGGCTGTCCAGGCTTG...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGCCCCGCTTCTTTCCTaGTTTGCGGCCCCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGAPLLS*FAAPLP Trigger: GGGCAGAGGGGCCGCAAACCAGGAAAGAAGCGGGGC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 62% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATTCTTCTTATCCAGGTaGGGGCCCGTGCTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLFFLSR*GPVLPL Trigger: GAGCGGCAGCACGGGCCCCCACCTGGATAAGAAGAA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCATGACTTCACCGCCGTaGCCCTGTTTGAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTMTSPP*PCLRKL Trigger: CAGCTTCCTCAAACAGGGCCACGGCGGTGAAGTCAT...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| 3UTR CAA 72 bp | TCTGGGGATCCAGTGAGAAGGCATGAGCTGGGGGCCTaGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGDPVRRHELGA*GHYAKPRRWQG Trigger: CCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCTCATGCCTTCTCACTGGATCCCCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AGCTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTTGTCCCAGGTAAAATaGCCTAGAGGTGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWDTMPSPGGGKGPGLSQVK*PRGDPM Trigger: CATGGGGTCACCTCTAGGTCATTTTACCTGGGACAA...CCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGTGTGTAGGACTGCTTaGAGCAATGGACAGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRVCRTA*SNGQAL Trigger: CAGCGCCTGTCCATTGCTTCAAGCAGTCCTACACAC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGGTGCTGGTTGTTGGTaGGGTGGGTGGTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGGAGCW*GGWWAQ Trigger: CTGAGCCCACCACCCACCTCACCAACAACCAGCACC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGGTGCTGGTTGTTGGTaGGGTGGGTGGTGGGCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSGAGCW*GGWWAQ Trigger: CTGAGCCCACCACCCACCTCACCAACAACCAGCACC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAGCATGGGATCCAAGCTaGGGATCGGCTTCCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPAWDPS*GSASRT Trigger: TGTCCGGGAAGCCGATCCTCAGCTTGGATCCCATGC...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTTCAGCCGGTCAATGTaGAAGGAGAGCTTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRFSRSM*KESLRA Trigger: CGCCCTCAAGCTCTCCTTTCACATTGACCGGCTGAA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTAGCACCAGTAGTCAAATaGGCCTCGCCACCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LGALGHYAKPRRWQGAWVAPVVK*ASPPIK Trigger: TTTGATGGGTGGCGAGGCGCATTTGACTACTGGTGC...TACCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTACAAACTGTGGGGGCCTaGATGGCTGAACTTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLQTVGA*MAELGT Trigger: CGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTG...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCCAGGTGGGGGCCCGTaGTGCCGCTCTTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSPGGGP*CRSCSS Trigger: ACTTGAACAAGAGCGGCAGCACGGGCCCCCACCTGG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACAAGCCTGGACAGCCTaGTGCAGCACCACAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPQAWTA*CSTTEA Trigger: TGCCTCTGTGGTGCTGCAGCAGGCTGTCCAGGCTTG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGGGAGGTTCAGAGTGTaGTGTTCCCGGTCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRGRFRV*CSRSNT Trigger: CGTGTTTGACCGGGAACAGCACACTCTGAACCTCCC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCGGTGATGCTGTTGACTaGTGGGAGGTTCAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTGDAVD*WEVQSV Trigger: CACACTCTGAACCTCCCAGCAGTCAACAGCATCACC...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCGGGGTAGAGGTGGGATaGGGAATAAGGATCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTGVEVG*GIRILG Trigger: ACCCAAGATCCTTATTCCCCATCCCACCTCTACCCC...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATTCTTCTTATCCAGGTaGGGGCCCGTGCTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPFFLSR*GPVLPL Trigger: GAGCGGCAGCACGGGCCCCCACCTGGATAAGAAGAA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCGGGCTGGCCCAAAATaGTCAGGGAGTTGTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRRAGPK*SGSCWI Trigger: GATCCAACAACTCCCTGACCATTTTGGGCCAGCCCG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATGGAGAGGCCCTCTCTaGACCAGAGGATGGTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPWRGPL*TRGWSP Trigger: GGGAGACCATCCTCTGGTCCAGAGAGGGCCTCTCCA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGGTACCAGGGCCTTTCAAGGTCCTAGGGCTGGCGTCTTCCTCATCTCTCCCCTCTGCCCTGGCTaGTGCTCCAAGACAGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRAFQGPRAGVFLISPLCPG*CSKTVL Trigger: CAAAACTGTCTTGGAGCATCAGCCAGGGCAGAGGGG...AGAGATGAGGAAGACGCCAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAACGGTGGCAGCATCTTaGGGAACAGTGCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPTVAAS*GTVLVS Trigger: GGACACCAGCACTGTTCCTCAAGATGCTGCCACCGT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTATCCTCCACTGTCCATaGGGAGGGGTCCCGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: MEGHIRAGRVAVVAFQPPILHCP*GGVPAT Trigger: AGTGGCCGGGACCCCTCCTCATGGACAGTGGAGGAT...AGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTTTTGGTGCTGTGGATaGTGGGCTTCTCAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTFWCCG*WASQCS Trigger: TGAGCACTGAGAAGCCCAGCATCCACAGCACCAAAA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCCCAAGACAGTTTTGGTaGTGTGGATGCTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTPRQFW*CGCWAS Trigger: AGAAGCCCAGCATCCACAGCACCAAAACTGTCTTGG...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGCTTCTTTCCTGGTTTaGGGCCCCTCTGCCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGASFLV*GPSALA Trigger: AGCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACAAACTGTGGGGGCCTaGATGGCTGAACTTGGGACG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPQTVGA*MAELGT Trigger: CGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGGTGGGGGCCCGTGCTaGCGCTCTTGTTCAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSGGGPC*RSCSSR Trigger: TCTACTTGAACAAGAGCGGCAGCACGGGCCCCCACC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGGGAGGTTCAGAGTGTaGTGTTCCCGGTCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLGRFRV*CSRSNT Trigger: CGTGTTTGACCGGGAACAGCACACTCTGAACCTCCC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGCTTCCCGGACAAACTaGATCACATCCTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRASRTN*ITSSTV Trigger: GACAGTGGAGGATGTGATGCAGTTTGTCCGGGAAGC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTGGTGCTGTGGATGCTaGGCTTCTCAGTGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRWCCGC*ASQCSH Trigger: ATGTGAGCACTGAGAAGCCCAGCATCCACAGCACCA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACTTGAGGAACAGTGCTaGTGTCCGGTTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPLEEQC*CPVQGC Trigger: GCACCCCTGAACCGGACACCAGCACTGTTCCTCAAG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCAGTAGATACAAACTGTaGGGGCCTGCATGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTSRYKL*GPAWLN Trigger: GTTCAGCCATGCAGGCCCCCACAGTTTGTATCTACT...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTTCTTCTTATCCAGGTaGGGGCCCGTGCTGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGFFLSR*GPVLPL Trigger: GAGCGGCAGCACGGGCCCCCACCTGGATAAGAAGAA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACAGAGGCACGGGCTaGCCCAAAATGGTCAGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSHRGTG*PKMVRE Trigger: CTCCCTGACCATTTTGGGCCAGCCCGTGCCTCTGTG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGATGCTGTTGACTGCTaGGAGGTTCAGAGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRDAVDC*EVQSVL Trigger: CAGCACACTCTGAACCTCCCAGCAGTCAACAGCATC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCCCTTATGGAAAATCTTaGTGGGAGCCATCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTPYGKS*WEPSLL Trigger: GAGCAGAGATGGCTCCCATCAAGATTTTCCATAAGG...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGCCACCCATCAAAGGTaGCTAGCACTTCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGATHQR*LALLRL Trigger: GAGGCGCAGAAGTGCTAGTCACCTTTGATGGGTGGC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTTTCAAAGGTTCAGCTaGCTTGGATGGGGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTFQRFS*LGWGRG Trigger: ACCTCTACCCCATCCAAGTCAGCTGAACCTTTGAAA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTGCATGGGATCCAAGCTaGGGATCGGCTTCCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTVPSSVLHGRTHQGRKGAWDPS*GSASRT Trigger: TGTCCGGGAAGCCGATCCTCAGCTTGGATCCCATGC...ACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATGCTGGGCTTCTCAGTaGTCACATCAGATGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLCWASQ*SHQMKG Trigger: CCCCTTCATCTGATGTGAGCACTGAGAAGCCCAGCA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTGGTGGGGGCCCGTGCTaGCGCTCTTGTTCAAGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: MEGHIRAGRVAVVAFQPPGGGPC*RSCSSR Trigger: TCTACTTGAACAAGAGCGGCAGCACGGGCCCCCACC...AGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTCCAGGTGGGGGCCCGTaGTGCCGCTCTTGTTCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VPSSVLHGRTHQGRKGSSPGGGP*CRSCSS Trigger: ACTTGAACAAGAGCGGCAGCACGGGCCCCCACCTGG...ACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGATAAGCACAGTCAATaGAAGCCTGGACAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRDKHSQ*KPGQPA Trigger: AGCAGGCTGTCCAGGCTTGCATTGACTGTGCTTATC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGCAGGAGCAGGGCCTTaGCATCGATTTCATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRAGAGP*HRFHVF Trigger: GAAAACATGAAATCGATGGCAAGGCCCTGCTCCTGC...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTCTTCAAAAGGAACATaGGCCAAGAGGAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWDTMPSPGGGKGPGSSKGT*AKRRHS Trigger: TGAATGCCTCCTCTTGGCCCATGTTCCTTTTGAAGA...CCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTTGGAATCACAACTTTaGTGCCAGGTGGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRLESQL*CQVAAG Trigger: ACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGCTCCAAGACAGTTTTaGTGCTGTGGATGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLAPRQF*CCGCWA Trigger: AGCCCAGCATCCACAGCACCAAAACTGTCTTGGAGC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | TGGGGCTACAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGGCCCCGCTTCTTTCCTaGTTTGCGGCCCCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGYKGPSVGRETLTFCSVAPLLS*FAAPLP Trigger: GGGCAGAGGGGCCGCAAACCAGGAAAGAAGCGGGGC...CACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTGTAGCCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGGGGTAGAGGTGGGATaGGGAATAAGGATCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLGVEVG*GIRILG Trigger: ACCCAAGATCCTTATTCCCCATCCCACCTCTACCCC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCTTGAGGAACAGTGCTaGTGTCCGGTTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSLEEQC*CPVQGC Trigger: GCACCCCTGAACCGGACACCAGCACTGTTCCTCAAG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTGGTCAGGGAGTTGTTaGATCTTCTTCTTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWGPWDTMPSPGGGKGPGWSGSC*IFFLSR Trigger: CCTGGATAAGAAGAAGATCCAACAACTCCCTGACCA...CCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAATGACTTCACCGCCGTaGCCCTGTTTGAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPMTSPP*PCLRKL Trigger: CAGCTTCCTCAAACAGGGCCACGGCGGTGAAGTCAT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGTGTGTAGGACTGCTTaGAGCAATGGACAGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSVCRTA*SNGQAL Trigger: CAGCGCCTGTCCATTGCTTCAAGCAGTCCTACACAC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAGCAGTGAGTGATAAGTaGGTCTGTGTAAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLAVSDK*VCVKGW Trigger: CCAGCCCTTTACACAGACTCACTTATCACTCACTGC...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCATGTGAAAGGAGAGCTTaGGGGCGGGCCCCAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPCERRA*GRAPAS Trigger: TGAAGCTGGGGCCCGCCCTCAAGCTCTCCTTTCACA...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | GCCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTTCAGCCGGTCAATGTaGAAGGAGAGCTTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: AHCSLLSPSWKDTSGQEGFSRSM*KESLRA Trigger: CGCCCTCAAGCTCTCCTTTCACATTGACCGGCTGAA...CCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTTCAGCCGGTCAATGTaGAAGGAGAGCTTGAGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGFSRSM*KESLRA Trigger: CGCCCTCAAGCTCTCCTTTCACATTGACCGGCTGAA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGCATCTTGAGGAACAGTaGTGGTGTCCGGTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGHLEEQ*WCPVQG Trigger: CCCCTGAACCGGACACCAGCACTGTTCCTCAAGATG...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCCTGGACAGCCTGCTaGAGCACCACAGAGGCACGG | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAWTAC*STTEAR Trigger: CCGTGCCTCTGTGGTGCTGCAGCAGGCTGTCCAGGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTACAGTTTCCAATTGGCTaGATTTCAGAGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: LGALGHYAKPRRWQGAWVQFPIG*ISEEST Trigger: GGTTGACTCCTCTGAAATCCAGCCAATTGGAAACTG...TACCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CTGGGGGCCTTGGGACACTATGCCAAGCCCAGGAGGTGGCAAGGGGCCTGGGTACTCACAGTTTCCAATTaGCTGGATTTCAGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGALGHYAKPRRWQGAWVLTVSN*LDFRGV Trigger: GACTCCTCTGAAATCCAGCCAATTGGAAACTGTGAG...TACCCAGGCCCCTTGCCACCTCCTGGGCTTGGCATAGTGTCCCAAGGCCCCCAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCCTCACAGTTTCCAATTaGCTGGATTTCAGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTLTVSN*LDFRGV Trigger: GACTCCTCTGAAATCCAGCCAATTGGAAACTGTGAG...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAACAGTTTTGGTGCTGTaGATGCTGGGCTTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLTVLVL*MLGFSV Trigger: CACTGAGAAGCCCAGCATCCACAGCACCAAAACTGT...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCCCCGCTTCTTTCCTaGTTTGCGGCCCCTCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAPLLS*FAAPLP Trigger: GGGCAGAGGGGCCGCAAACCAGGAAAGAAGCGGGGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTGGTTGTTGGTGAGGTaGGTGGTGGGCTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGWLLVR*VVGSAK Trigger: CTTTGCTGAGCCCACCACCCACCTCACCAACAACCA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTAGAGTCCTGCGGGCTGGCCCAAAATaGTCAGGGAGTTGTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HIRAGRVAVVAFQPPRVLRAGPK*SGSCWI Trigger: GATCCAACAACTCCCTGACCATTTTGGGCCAGCCCG...CAGGACTCTAGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCATGACTTCACCGCCGTaGCCCTGTTTGAGGAAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSMTSPP*PCLRKL Trigger: CAGCTTCCTCAAACAGGGCCACGGCGGTGAAGTCAT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAGATGCTGTTGACTGCTaGGAGGTTCAGAGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPDAVDC*EVQSVL Trigger: CAGCACACTCTGAACCTCCCAGCAGTCAACAGCATC...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTCACTTCGAAGGTTGTaGCAGAGCTTCTCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRSLRRL*QSFSRK Trigger: TTTCCTGGAGAAGCTCTGCCACAACCTTCGAAGTGA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATTGTCCCAGGTAAAATaGCCTAGAGGTGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPLSQVK*PRGDPM Trigger: CATGGGGTCACCTCTAGGTCATTTTACCTGGGACAA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCGCCACCCATCAAAGGTaGCTAGCACTTCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSATHQR*LALLRL Trigger: GAGGCGCAGAAGTGCTAGTCACCTTTGATGGGTGGC...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATTTCAAAGGTTCAGCTaGCTTGGATGGGGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLFQRFS*LGWGRG Trigger: ACCTCTACCCCATCCAAGTCAGCTGAACCTTTGAAA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCACGGTGGCAGCATCTTaGGGAACAGTGCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSTVAAS*GTVLVS Trigger: GGACACCAGCACTGTTCCTCAAGATGCTGCCACCGT...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTATACTCTGTGGCAGTaGGTGATAAGTGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRYTLWQ*VISESV Trigger: CACAGACTCACTTATCACTCACTGCCACAGAGTATA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGGTTTTGGGATGTGCTaGCAAGGTTGGCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGGFGMC*QGWQAS Trigger: TGAAGCCTGCCAACCTTGTCAGCACATCCCAAAACC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTCTGACCCTGGGGAATaGTTTAGTTTCCAAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GRTPPALRSSSHHWGPVTSDPGE*FSFQND Trigger: GTCATTTTGGAAACTAAATCATTCCCCAGGGTCAGA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGATCCTCCACTGTCCATaGGGAGGGGTCCCGGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREILHCP*GGVPAT Trigger: AGTGGCCGGGACCCCTCCTCATGGACAGTGGAGGAT...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTACATTCTTGTTGTCACTaGCATCAAGGCGCAGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLHSCCH*HQGADE Trigger: TTCGTCTGCGCCTTGATGGCAGTGACAACAAGAATG...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATTGGTGCCAGGTGGCTaGAGGTTATCTCCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPLVPGG*RLSPVK Trigger: TTTGACTGGAGATAACCTGCAGCCACCTGGCACCAA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTGCTGGGCTTCTCAGTaGTCACATCAGATGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSCWASQ*SHQMKG Trigger: CCCCTTCATCTGATGTGAGCACTGAGAAGCCCAGCA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGGTGATGCTGTTGACTaGTGGGAGGTTCAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGGDAVD*WEVQSV Trigger: CACACTCTGAACCTCCCAGCAGTCAACAGCATCACC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 57% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGCTTCCCGGACAAACTaGATCACATCCTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSASRTN*ITSSTV Trigger: GACAGTGGAGGATGTGATGCAGTTTGTCCGGGAAGC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGTACCAGGGCCTTTCAAGGTCCTAGGGCTGGCGTCTTCCTCATCTCTGCAGGAGCAGGGCCTTaGCATCGATTTCATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRAFQGPRAGVFLISAGAGP*HRFHVF Trigger: GAAAACATGAAATCGATGGCAAGGCCCTGCTCCTGC...AGAGATGAGGAAGACGCCAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTCACCCAGAGCCCTACTAAGGTGCCTGGGAGCTGGCGGGCGGCTTCCTCTTGAACTCATTACTTaGAGGTGTGTAGGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LRSPRALLRCLGAGGRLPLELIT*RCVGLL Trigger: AAGCAGTCCTACACACCTCCAAGTAATGAGTTCAAG...AGGAAGCCGCCCGCCAGCTCCCAGGCACCTTAGTAGGGCTCTGGGTGACCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATCAATCCAACGACCGTaGCAATACAGGTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPSIQRP*QYRWMW Trigger: CCACATCCACCTGTATTGCCACGGTCGTTGGATTGA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCAGTTTCCAATTGGCTaGATTTCAGAGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRQFPIG*ISEEST Trigger: GGTTGACTCCTCTGAAATCCAGCCAATTGGAAACTG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTCTTCAAAAGGAACATaGGCCAAGAGGAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRSSKGT*AKRRHS Trigger: TGAATGCCTCCTCTTGGCCCATGTTCCTTTTGAAGA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTATTTTGAAGAAGTTGTaGGAAGGTGATGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRILKKL*EGDGGS Trigger: GGAGCCACCATCACCTTCCCACAACTTCTTCAAAAT...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAACAGTTTTGGTGCTGTaGATGCTGGGCTTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPTVLVL*MLGFSV Trigger: CACTGAGAAGCCCAGCATCCACAGCACCAAAACTGT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGCTCCAAGACAGTTTTaGTGCTGTGGATGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGAPRQF*CCGCWA Trigger: AGCCCAGCATCCACAGCACCAAAACTGTCTTGGAGC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 57% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGGGGTAGAGGTGGGATaGGGAATAAGGATCTTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGGVEVG*GIRILG Trigger: ACCCAAGATCCTTATTCCCCATCCCACCTCTACCCC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 57% GC, longest homopolymer 9 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTCTTGAGGAACAGTGCTaGTGTCCGGTTCAGGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VPSSVLHGRTHQGRKGSSLEEQC*CPVQGC Trigger: GCACCCCTGAACCGGACACCAGCACTGTTCCTCAAG...ACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCTGGCGTCTTCCTCATCTCTTGAAAGGTGCTCGTCTAAACTTGTGGAGCTGTGGGGGCCTGCATaGCTGAACTTGGGACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSSSLERCSSKLVELWGPA*LNLGRW Trigger: CCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAG...CTCCACAAGTTTAGACGAGCACCTTTCAAGAGATGAGGAAGACGCCAGCCCTAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTTGTCCCAGGTAAAATaGCCTAGAGGTGACCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSLSQVK*PRGDPM Trigger: CATGGGGTCACCTCTAGGTCATTTTACCTGGGACAA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGAAGTTGTGGGAAGGTaGTGGTGGCTCCTTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSEVVGR*WWLLME Trigger: TTCCATAAGGAGCCACCATCACCTTCCCACAACTTC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGCAGTGAGTGATAAGTaGGTCTGTGTAAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSAVSDK*VCVKGW Trigger: CCAGCCCTTTACACAGACTCACTTATCACTCACTGC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATACCTGTCGTGGTTGTaGTTATACTCTGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPYLSWL*LYSVAV Trigger: CACTGCCACAGAGTATAATCACAACCACGACAGGTA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCATGGGATCCAAGCTaGGGATCGGCTTCCCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAWDPS*GSASRT Trigger: TGTCCGGGAAGCCGATCCTCAGCTTGGATCCCATGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GGCCTGGGTACCAGGGCCTTTCAAGGTCCTAGGGCTGGCGTCTTCCTCATCTCTCATTCTTGTTGTCACTaGCATCAAGGCGCAGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLGTRAFQGPRAGVFLISHSCCH*HQGADE Trigger: TTCGTCTGCGCCTTGATGGCAGTGACAACAAGAATG...AGAGATGAGGAAGACGCCAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTTTTGGTGCTGTGGATaGTGGGCTTCTCAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSFWCCG*WASQCS Trigger: TGAGCACTGAGAAGCCCAGCATCCACAGCACCAAAA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCACATCTTGAGGAACAGTaGTGGTGTCCGGTTCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPHLEEQ*WCPVQG Trigger: CCCCTGAACCGGACACCAGCACTGTTCCTCAAGATG...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCGGGAGGTTCAGAGTGTaGTGTTCCCGGTCAAACACG | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSGRFRV*CSRSNT Trigger: CGTGTTTGACCGGGAACAGCACACTCTGAACCTCCC...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | CCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTGGTGATGCTGTTGACTaGTGGGAGGTTCAGAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PTVPSSVLHGRTHQGRKGGDAVD*WEVQSV Trigger: CACACTCTGAACCTCCCAGCAGTCAACAGCATCACC...ACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGCAGGAGCAGGGCCTTaGCATCGATTTCATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGAGAGP*HRFHVF Trigger: GAAAACATGAAATCGATGGCAAGGCCCTGCTCCTGC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTCAATCCAACGACCGTaGCAATACAGGTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AHCSLLSPSWKDTSGQEGSIQRP*QYRWMW Trigger: CCACATCCACCTGTATTGCCACGGTCGTTGGATTGA...CCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTTTCTCCAATAGTGGCTaGGCAAATGAAATGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRFSNSG*ANEMRV Trigger: AACCCTCATTTCATTTGCCCAGCCACTATTGGAGAA...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCAACTTTGGTGCCAGGTaGCTGCAGGTTATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSNFGAR*LQVISS Trigger: ACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTAGAGTCCTGTTGGAATCACAACTTTaGTGCCAGGTGGCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HIRAGRVAVVAFQPPRVLLESQL*CQVAAG Trigger: ACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAA...CAGGACTCTAGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGACAGTTTTGGTGCTGTaGATGCTGGGCTTCTCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGTVLVL*MLGFSV Trigger: CACTGAGAAGCCCAGCATCCACAGCACCAAAACTGT...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATGGTCAGGGAGTTGTTaGATCTTCTTCTTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLWSGSC*IFFLSR Trigger: CCTGGATAAGAAGAAGATCCAACAACTCCCTGACCA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTGATGCTGTTGACTGCTaGGAGGTTCAGAGTGTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTVPSSVLHGRTHQGRKGDAVDC*EVQSVL Trigger: CAGCACACTCTGAACCTCCCAGCAGTCAACAGCATC...ACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATCACTTCGAAGGTTGTaGCAGAGCTTCTCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPSLRRL*QSFSRK Trigger: TTTCCTGGAGAAGCTCTGCCACAACCTTCGAAGTGA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGCCTTATGGAAAATCTTaGTGGGAGCCATCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGPYGKS*WEPSLL Trigger: GAGCAGAGATGGCTCCCATCAAGATTTTCCATAAGG...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCCACCCATCAAAGGTaGCTAGCACTTCTGCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREATHQR*LALLRL Trigger: GAGGCGCAGAAGTGCTAGTCACCTTTGATGGGTGGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTACCTGTCGTGGTTGTaGTTATACTCTGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSYLSWL*LYSVAV Trigger: CACTGCCACAGAGTATAATCACAACCACGACAGGTA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATCTGACCCTGGGGAATaGTTTAGTTTCCAAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLSDPGE*FSFQND Trigger: GTCATTTTGGAAACTAAATCATTCCCCAGGGTCAGA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGCATTCTTGTTGTCACTaGCATCAAGGCGCAGACGAA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGHSCCH*HQGADE Trigger: TTCGTCTGCGCCTTGATGGCAGTGACAACAAGAATG...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTCCAAGACAGTTTTGGTaGTGTGGATGCTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PTVPSSVLHGRTHQGRKGPRQFW*CGCWAS Trigger: AGAAGCCCAGCATCCACAGCACCAAAACTGTCTTGG...ACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGATTCCAGAGAAGAAGTaGCCTAGGGCAGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGIPEKK*PRAVSS Trigger: AGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAAT...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGATGGTGGCTCCTTATaGAAAATCTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSDGGSL*KILMGA Trigger: GGCTCCCATCAAGATTTTCCATAAGGAGCCACCATC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGATGGTGGCTCCTTATaGAAAATCTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGDGGSL*KILMGA Trigger: GGCTCCCATCAAGATTTTCCATAAGGAGCCACCATC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAATTTTGAAGAAGTTGTaGGAAGGTGATGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPILKKL*EGDGGS Trigger: GGAGCCACCATCACCTTCCCACAACTTCTTCAAAAT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCTCCAAGACAGTTTTaGTGCTGTGGATGCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPAPRQF*CCGCWA Trigger: AGCCCAGCATCCACAGCACCAAAACTGTCTTGGAGC...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTCTTACTGCCAGGCTTaGGACCTCTCTTCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSSYCQA*DLSSLE Trigger: TTCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATGGTCAGGGAGTTGTTaGATCTTCTTCTTATCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPWSGSC*IFFLSR Trigger: CCTGGATAAGAAGAAGATCCAACAACTCCCTGACCA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCGAAGTTGTGGGAAGGTaGTGGTGGCTCCTTATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSEVVGR*WWLLME Trigger: TTCCATAAGGAGCCACCATCACCTTCCCACAACTTC...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | ATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTTACCTGTCGTGGTTGTaGTTATACTCTGTGGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MEGHIRAGRVAVVAFQPPYLSWL*LYSVAV Trigger: CACTGCCACAGAGTATAATCACAACCACGACAGGTA...AGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATCTGACCCTGGGGAATaGTTTAGTTTCCAAAATGAC | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPSDPGE*FSFQND Trigger: GTCATTTTGGAAACTAAATCATTCCCCAGGGTCAGA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCTTGGTGCCAGGTGGCTaGAGGTTATCTCCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSLVPGG*RLSPVK Trigger: TTTGACTGGAGATAACCTGCAGCCACCTGGCACCAA...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | AGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGCAAGCCTGGACAGCCTaGTGCAGCACCACAGAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQILCPFQRRSALGQCLLQAWTA*CSTTEA Trigger: TGCCTCTGTGGTGCTGCAGCAGGCTGTCCAGGCTTG...CAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGATAAGCACAGTCAATaGAAGCCTGGACAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: VPSSVLHGRTHQGRKGSSDKHSQ*KPGQPA Trigger: AGCAGGCTGTCCAGGCTTGCATTGACTGTGCTTATC...ACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACTTGAACTCATTACTTaGAGGTGTGTAGGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPLELIT*RCVGLL Trigger: AAGCAGTCCTACACACCTCCAAGTAATGAGTTCAAG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAGTTTCCAATTGGCTaGATTTCAGAGGAGTCAACC | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSQFPIG*ISEEST Trigger: GGTTGACTCCTCTGAAATCCAGCCAATTGGAAACTG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCTCACAGTTTCCAATTaGCTGGATTTCAGAGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSLTVSN*LDFRGV Trigger: GACTCCTCTGAAATCCAGCCAATTGGAAACTGTGAG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATTCTCCAATAGTGGCTaGGCAAATGAAATGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: STGASRGQNSSSLEVLLPFSNSG*ANEMRV Trigger: AACCCTCATTTCATTTGCCCAGCCACTATTGGAGAA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAACTTTGGTGCCAGGTaGCTGCAGGTTATCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSNFGAR*LQVISS Trigger: ACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTT...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCTGGCGTCTTCCTCATCTCTTGAAAGGTGCTCGTCTAAACTTGTGGAGTGGTTGTTGGTGAGGTaGGTGGTGGGCTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSSSLERCSSKLVEWLLVR*VVGSAK Trigger: CTTTGCTGAGCCCACCACCCACCTCACCAACAACCA...CTCCACAAGTTTAGACGAGCACCTTTCAAGAGATGAGGAAGACGCCAGCCCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTGGTTGTTGGTGAGGTaGGTGGTGGGCTCAGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREWLLVR*VVGSAK Trigger: CTTTGCTGAGCCCACCACCCACCTCACCAACAACCA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCGGGCTGGCCCAAAATaGTCAGGGAGTTGTTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRERAGPK*SGSCWI Trigger: GATCCAACAACTCCCTGACCATTTTGGGCCAGCCCG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCGTCTGTGTAAAGGGCTaGTTGCCAAACAGATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAQELAEGRTPPALRSSSVCVKG*LPNRLS Trigger: TGACAATCTGTTTGGCAACCAGCCCTTTACACAGAC...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGGTCTGTGTAAAGGGCTaGTTGCCAAACAGATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALGPIFCSNSDQGRELWGVCVKG*LPNRLS Trigger: TGACAATCTGTTTGGCAACCAGCCCTTTACACAGAC...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCACCAGTAGTCAAATaGGCCTCGCCACCCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAPVVK*ASPPIK Trigger: TTTGATGGGTGGCGAGGCGCATTTGACTACTGGTGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | CTAGGGCTGGCGTCTTCCTCATCTCTTGAAAGGTGCTCGTCTAAACTTGTGGAGTGCTGGGCTTCTCAGTaGTCACATCAGATGAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSSSLERCSSKLVECWASQ*SHQMKG Trigger: CCCCTTCATCTGATGTGAGCACTGAGAAGCCCAGCA...CTCCACAAGTTTAGACGAGCACCTTTCAAGAGATGAGGAAGACGCCAGCCCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCTTCCCGGACAAACTaGATCACATCCTCCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREASRTN*ITSSTV Trigger: GACAGTGGAGGATGTGATGCAGTTTGTCCGGGAAGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGATGGTGGCTCCTTATaGAAAATCTTGATGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VPSSVLHGRTHQGRKGSSDGGSL*KILMGA Trigger: GGCTCCCATCAAGATTTTCCATAAGGAGCCACCATC...ACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | ATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTATTTTGAAGAAGTTGTaGGAAGGTGATGGTGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MEGHIRAGRVAVVAFQPPILKKL*EGDGGS Trigger: GGAGCCACCATCACCTTCCCACAACTTCTTCAAAAT...AGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | CTAGGGCTGGCGTCTTCCTCATCTCTTGAAAGGTGCTCGTCTAAACTTGTGGAGTGGTGCTGTGGATGCTaGGCTTCTCAGTGCTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LGLASSSSLERCSSKLVEWCCGC*ASQCSH Trigger: ATGTGAGCACTGAGAAGCCCAGCATCCACAGCACCA...CTCCACAAGTTTAGACGAGCACCTTTCAAGAGATGAGGAAGACGCCAGCCCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCAGTGAGTGATAAGTaGGTCTGTGTAAAGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAVSDK*VCVKGW Trigger: CCAGCCCTTTACACAGACTCACTTATCACTCACTGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTTGGTGCCAGGTGGCTaGAGGTTATCTCCAGTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRELVPGG*RLSPVK Trigger: TTTGACTGGAGATAACCTGCAGCCACCTGGCACCAA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCCAAGACAGTTTTGGTaGTGTGGATGCTGGGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREPRQFW*CGCWAS Trigger: AGAAGCCCAGCATCCACAGCACCAAAACTGTCTTGG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGATAAGCACAGTCAATaGAAGCCTGGACAGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREDKHSQ*KPGQPA Trigger: AGCAGGCTGTCCAGGCTTGCATTGACTGTGCTTATC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGAGTAGATACAAACTGTaGGGGCCTGCATGGCTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRESRYKL*GPAWLN Trigger: GTTCAGCCATGCAGGCCCCCACAGTTTGTATCTACT...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGTCTGTGTAAAGGGCTaGTTGCCAAACAGATTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPVCVKG*LPNRLS Trigger: TGACAATCTGTTTGGCAACCAGCCCTTTACACAGAC...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCCTTATGGAAAATCTTaGTGGGAGCCATCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREPYGKS*WEPSLL Trigger: GAGCAGAGATGGCTCCCATCAAGATTTTCCATAAGG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | AGCCAAATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGGGTTTTGGGATGTGCTaGCAAGGTTGGCAGGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQILCPFQRRSALGQCLLGFGMC*QGWQAS Trigger: TGAAGCCTGCCAACCTTGTCAGCACATCCCAAAACC...CAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATTTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR GCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGATTCCAGAGAAGAAGTaGCCTAGGGCAGTGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREIPEKK*PRAVSS Trigger: AGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAAT...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCATTCTCCAATAGTGGCTaGGCAAATGAAATGAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPFSNSG*ANEMRV Trigger: AACCCTCATTTCATTTGCCCAGCCACTATTGGAGAA...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTCTTACTGCCAGGCTTaGGACCTCTCTTCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRESYCQA*DLSSLE Trigger: TTCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGGCTGGGCAAATGAAATaGGGGTTCTTTCTGTCTACA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREAGQMK*GFFLST Trigger: TGTAGACAGAAAGAACCCTCATTTCATTTGCCCAGC...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR TCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTATACTCTGTGGCAGTaGGTGATAAGTGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGREYTLWQ*VISESV Trigger: CACAGACTCACTTATCACTCACTGCCACAGAGTATA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTCTTCAAAAGGAACATaGGCCAAGAGGAGGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRESSKGT*AKRRHS Trigger: TGAATGCCTCCTCTTGGCCCATGTTCCTTTTGAAGA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| 3UTR CAA 72 bp | CAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTaGCTCAGTGAGCCAAATACTTTGTCCATTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRTQCRKRDPHL*LSEPNTLSIPE Trigger: CTCTGGAATGGACAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTTGAACTCATTACTTaGAGGTGTGTAGGACTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: DLIALGPIFCSNSDQGRELELIT*RCVGLL Trigger: AAGCAGTCCTACACACCTCCAAGTAATGAGTTCAAG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CCA 90 bp | ACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGAGCCAAATACTTTGTCTTACTGCCAGGCTTaGGACCTCTCTTCTTTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TQCRKRDPHLLLSEPNTLSYCQA*DLSSLE Trigger: TTCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGA...CAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | ACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGAGCCAAATACTTTGTATACTCTGTGGCAGTaGGTGATAAGTGAGTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TQCRKRDPHLLLSEPNTLYTLWQ*VISESV Trigger: CACAGACTCACTTATCACTCACTGCCACAGAGTATA...CAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR TCA 90 bp | AATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGAAATATTTCAAAGGTTCAGCTaGCTTGGATGGGGTAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTLSIPEKKCPRAVSSEIFQRFS*LGWGRG Trigger: ACCTCTACCCCATCCAAGTCAGCTGAACCTTTGAAA...TATTTCAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CCA 90 bp | AATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGAAATATCACTTCGAAGGTTGTaGCAGAGCTTCTCCAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NTLSIPEKKCPRAVSSEISLRRL*QSFSRK Trigger: TTTCCTGGAGAAGCTCTGCCACAACCTTCGAAGTGA...TATTTCAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTCGCTTCTTTCCTGGTTaGCGGCCCCTCTGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRRFFPG*RPLCPG Trigger: GCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGCG...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS TCA 90 bp | AGGATCGGCTTCCCGGACAAACTGCATCACATCCTCCACTGTCCATaGGGAGGGGTCCCGGCCACTCAGGCGAGGGGGATCTCGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RIGFPDKLHHILHCP*GGVPATQARGISAL Trigger: GAGAGCCGAGATCCCCCTCGCCTGAGTGGCCGGGACCCCTCCTCATGGACAGTGGAGGATGTGATGCAGTTTGTCCGGGAAGCCGATCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACGCTTCTTTCCTGGTTaGCGGCCCCTCTGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPRFFPG*RPLCPG Trigger: GCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGCG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTGGGGAATAAGGATCTaGGGTGTTCGGCCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRTPPALRSSSHHWGPVTWGIRI*GVRPRF Trigger: GAAGCGGGGCCGAACACCCAAGATCCTTATTCCCCA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS CCA 90 bp | GGTCAAACACGGCTGTGGGGGCCTGCATGGCTGAACTTGGGACGGTaGCAGCATCTTGAGGAACAGTGCTGGTGTCCGGTTCAGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GQTRLWGPAWLNLGR*QHLEEQCWCPVQGC Trigger: GCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGCCGTGTTTGACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000122860.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAGGGGTGCTGGTTGTaGGTGAGGTGGGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSQGCWL*VRWVVG Trigger: GCCCACCACCCACCTCACCAACAACCAGCACCCCTG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATGGGGAATAAGGATCTaGGGTGTTCGGCCCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLWGIRI*GVRPRF Trigger: GAAGCGGGGCCGAACACCCAAGATCCTTATTCCCCA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS GCA 90 bp | CCTGCATGGCTGAACTTGGGACGGTGGCAGCATCTTGAGGAACAGTaGTGGTGTCCGGTTCAGGGGTGCTGGTTGTTGGTGAGGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAWLNLGRWQHLEEQ*WCPVQGCWLLVRWV Trigger: CACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CCA 90 bp | GCATGGCTGAACTTGGGACGGTGGCAGCATCTTGAGGAACAGTGCTaGTGTCCGGTTCAGGGGTGCTGGTTGTTGGTGAGGTGGGTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AWLNLGRWQHLEEQC*CPVQGCWLLVRWVV Trigger: CACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTAAAGGTTCAGCTGACTaGGATGGGGTAGAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRKGSAD*DGVEVG Trigger: TCCCACCTCTACCCCATCCAAGTCAGCTGAACCTTT...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCCAGGGGTGCTGGTTGTaGGTGAGGTGGGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSQGCWL*VRWVVG Trigger: GCCCACCACCCACCTCACCAACAACCAGCACCCCTG...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCTGCATGGCTGAACTaGGGACGGTGGCAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPPAWLN*GRWQHL Trigger: AAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGG...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS CCA 90 bp | TGGCAGCATCTTGAGGAACAGTGCTGGTGTCCGGTTCAGGGGTGCTaGTTGTTGGTGAGGTGGGTGGTGGGCTCAGCAAAGTCCGAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: WQHLEEQCWCPVQGC*LLVRWVVGSAKSEV Trigger: AACCTCGGACTTTGCTGAGCCCACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCCTGCATGGCTGAACTaGGGACGGTGGCAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSPAWLN*GRWQHL Trigger: AAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGCCTGCATGGCTGAACTaGGGACGGTGGCAGCATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGPAWLN*GRWQHL Trigger: AAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGG...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS CCA 90 bp | AGTAGATACAAACTGTGGGGGCCTGCATGGCTGAACTTGGGACGGTaGCAGCATCTTGAGGAACAGTGCTGGTGTCCGGTTCAGGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRYKLWGPAWLNLGR*QHLEEQCWCPVQGC Trigger: GCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTGTATCTACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTCCTTATGGAAAATCTaGATGGGAGCCATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GRTPPALRSSSHHWGPVTSLWKI*MGAISA Trigger: AGCAGAGATGGCTCCCATCAAGATTTTCCATAAGGA...GGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATTTGGAATCACAACTTaGGTGCCAGGTGGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPFGITT*VPGGCR Trigger: CCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCAGGGGTGCTGGTTGTaGGTGAGGTGGGTGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: DLIALGPIFCSNSDQGREQGCWL*VRWVVG Trigger: GCCCACCACCCACCTCACCAACAACCAGCACCCCTG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTTTGGAATCACAACTTaGGTGCCAGGTGGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGFGITT*VPGGCR Trigger: CCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTAAAGGGGACGGATTCTTaGGAATCACAACTTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLKGTDS*ESQLWC Trigger: GCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTT...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCAAAGGTTCAGCTGACTaGGATGGGGTAGAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSKGSAD*DGVEVG Trigger: TCCCACCTCTACCCCATCCAAGTCAGCTGAACCTTT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCTCTTACTGCCAGGCTaGGGACCTCTCTTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSLLLPG*GPLFFG Trigger: TCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGAG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTATGGTCAGGGAGTTGTaGGATCTTCTTCTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRMVREL*DLLLIQ Trigger: CTGGATAAGAAGAAGATCCAACAACTCCCTGACCAT...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATGGTTGCCAAACAGATaGTCACTTCGAAGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLWLPNR*SLRRLW Trigger: CCACAACCTTCGAAGTGACAATCTGTTTGGCAACCA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS GCA 90 bp | GGTCAGGGAGTTGTTGGATCTTCTTCTTATCCAGGTGGGGGCCCGTaGTGCCGCTCTTGTTCAAGTAGATACAAACTGTGGGGGCCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: GQGVVGSSSYPGGGP*CRSCSSRYKLWGPA Trigger: TGCAGGCCCCCACAGTTTGTATCTACTTGAACAAGAGCGGCAGCACGGGCCCCCACCTGGATAAGAAGAAGATCCAACAACTCCCTGACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATCTCACAGTTTCCAATaGGCTGGATTTCAGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLSHSFQ*AGFQRS Trigger: ACTCCTCTGAAATCCAGCCAATTGGAAACTGTGAGA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCCCATTTTGAAGAAGTaGTGGGAAGGTGATGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSPILKK*WEGDGG Trigger: GCCACCATCACCTTCCCACAACTTCTTCAAAATGGG...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGCCCATTTTGAAGAAGTaGTGGGAAGGTGATGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGPILKK*WEGDGG Trigger: GCCACCATCACCTTCCCACAACTTCTTCAAAATGGG...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | ACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGAGCCAAATACTTTGCGCTTCTTTCCTGGTTaGCGGCCCCTCTGCCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TQCRKRDPHLLLSEPNTLRFFPG*RPLCPG Trigger: GCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGCG...CAAAGTATTTGGCTCACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATGGTTGCCAAACAGATaGTCACTTCGAAGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPWLPNR*SLRRLW Trigger: CCACAACCTTCGAAGTGACAATCTGTTTGGCAACCA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTGACCTATGTGTAAAGGGCTGGTaGCCAAACAGATTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: QNSSSLEVLLPPLGPRDLCVKGW*PNRLSL Trigger: AAGTGACAATCTGTTTGGCAACCAGCCCTTTACACA...TAGGTCACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCACCATTGGGGCCCCGTAGTGAGCCAAATACTTaGTCCATTCCAGAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGQNSSSLEVLLPPLGPRSEPNT*SIPEKK Trigger: CTTCTTCTCTGGAATGGACAAAGTATTTGGCTCACT...ACGGGGCCCCAATGGTGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGAAGGGGACGGATTCTTaGGAATCACAACTTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGKGTDS*ESQLWC Trigger: GCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTT...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | ACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAAAGGTTCAGCTGACTaGGATGGGGTAGAGGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TVPSSVLHGRTHQGRKGSKGSAD*DGVEVG Trigger: TCCCACCTCTACCCCATCCAAGTCAGCTGAACCTTT...GCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | GCCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTGGTTGCCAAACAGATaGTCACTTCGAAGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AHCSLLSPSWKDTSGQEGWLPNR*SLRRLW Trigger: CCACAACCTTCGAAGTGACAATCTGTTTGGCAACCA...CCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | GGCCTGGGTACCAGGGCCTTTCAAGGTCCTAGGGCTGGCGTCTTCCTCATCTCTTGTGTAAAGGGCTGGTaGCCAAACAGATTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GLGTRAFQGPRAGVFLISCVKGW*PNRLSL Trigger: AAGTGACAATCTGTTTGGCAACCAGCCCTTTACACA...AGAGATGAGGAAGACGCCAGCCCTAGGACCTTGAAAGGCCCTGGTACCCAGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS CCA 90 bp | TCTGCCCTGGCTGATGCTCCAAGACAGTTTTGGTGCTGTGGATGCTaGGCTTCTCAGTGCTCACATCAGATGAAGGGGACGGATTCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: SALADAPRQFWCCGC*ASQCSHQMKGTDSL Trigger: CAAAGAATCCGTCCCCTTCATCTGATGTGAGCACTGAGAAGCCCAGCATCCACAGCACCAAAACTGTCTTGGAGCATCAGCCAGGGCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTCTCACAGTTTCCAATaGGCTGGATTTCAGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGSHSFQ*AGFQRS Trigger: ACTCCTCTGAAATCCAGCCAATTGGAAACTGTGAGA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCTCCTTATGGAAAATCTaGATGGGAGCCATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSSLWKI*MGAISA Trigger: AGCAGAGATGGCTCCCATCAAGATTTTCCATAAGGA...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTCCCATTTTGAAGAAGTaGTGGGAAGGTGATGGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: VPSSVLHGRTHQGRKGSSPILKK*WEGDGG Trigger: GCCACCATCACCTTCCCACAACTTCTTCAAAATGGG...ACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | ATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCAGCCTCCTAAGGGGACGGATTCTTaGGAATCACAACTTTGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: MEGHIRAGRVAVVAFQPPKGTDS*ESQLWC Trigger: GCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTT...AGGAGGCTGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCATGGGACCTCTCTTCTTaGGAAATTTCAAAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPWDLSS*EISKVQ Trigger: CTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCCA...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCATGGTCAGGGAGTTGTaGGATCTTCTTCTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSMVREL*DLLLIQ Trigger: CTGGATAAGAAGAAGATCCAACAACTCCCTGACCAT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS TCA 90 bp | CCATCGATTTCATGTTTTCGGAAGAGGTCAGCATGGGATCCAAGCTaGGGATCGGCTTCCCGGACAAACTGCATCACATCCTCCACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSISCFRKRSAWDPS*GSASRTNCITSSTV Trigger: GACAGTGGAGGATGTGATGCAGTTTGTCCGGGAAGCCGATCCTCAGCTTGGATCCCATGCTGACCTCTTCCGAAAACATGAAATCGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTTTGGAATCACAACTTaGGTGCCAGGTGGCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DLIALGPIFCSNSDQGREFGITT*VPGGCR Trigger: CCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTGTGGGGGTGGGACCTCTCTTCTTaGGAAATTTCAAAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ALGPIFCSNSDQGRELWGWDLSS*EISKVQ Trigger: CTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCCA...CCCCCACAGCTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGCTCTTACTGCCAGGCTaGGGACCTCTCTTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: DLIALGPIFCSNSDQGRELLLPG*GPLFFG Trigger: TCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGAG...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | CCCACTGTTCCCTCCTCAGTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTATGGTCAGGGAGTTGTaGGATCTTCTTCTTATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: PTVPSSVLHGRTHQGRKGMVREL*DLLLIQ Trigger: CTGGATAAGAAGAAGATCCAACAACTCCCTGACCAT...ACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGACTGAGGAGGGAACAGTGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCAGTGAGCCAAATACTTaGTCCATTCCAGAGAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSSEPNT*SIPEKK Trigger: CTTCTTCTCTGGAATGGACAAAGTATTTGGCTCACT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS TCA 90 bp | GCCAGGCTTGGGACCTCTCTTCTTTGGAAATTTCAAAGGTTCAGCTaGCTTGGATGGGGTAGAGGTGGGATGGGGAATAAGGATCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLGTSLLWKFQRFS*LGWGRGGMGNKDLG Trigger: CCCAAGATCCTTATTCCCCATCCCACCTCTACCCCATCCAAGTCAGCTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCCAAGCCTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS GCA 90 bp | GAAGGGGACGGATTCTTTGGAATCACAACTTTGGTGCCAGGTGGCTaGAGGTTATCTCCAGTCAAAGAACACCAGCCCACAGGAAAGATG | + |
|
Preference number: 5 (lower is better) Translates to: EGDGFFGITTLVPGG*RLSPVKEHQPTGKM Trigger: CATCTTTCCTGTGGGCTGGTGTTCTTTGACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCCAAATTTCATGCTGATCTaGAACTCATTACTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: STGASRGQNSSSLEVLLPNFMLI*NSLLGG Trigger: ACCTCCAAGTAATGAGTTCAAGATCAGCATGAAATT...TGGGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTCATGGAAGGACACATCAGGGCAGGAAGGGTAGCAGTGGTGGCTTTCCATCCTTATGGAAAATCTaGATGGGAGCCATCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VLHGRTHQGRKGSSGGFPSLWKI*MGAISA Trigger: AGCAGAGATGGCTCCCATCAAGATTTTCCATAAGGA...TGGAAAGCCACCACTGCTACCCTTCCTGCCCTGATGTGTCCTTCCATGAAGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | AAAGCACAGGAGCTAGCAGAGGGCAGAACTCCTCCAGCCTTGAGGTCCTCCTCCAATTTCATGCTGATCTaGAACTCATTACTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: KAQELAEGRTPPALRSSSNFMLI*NSLLGG Trigger: ACCTCCAAGTAATGAGTTCAAGATCAGCATGAAATT...GGAGGAGGACCTCAAGGCTGGAGGAGTTCTGCCCTCTGCTAGCTCCTGTGCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | TGGGGCTACAAAGGACCCAGTGTAGGAAGAGAGACCCTCACCTTTTGCTCAGTGTGGGACCTCTCTTCTTaGGAAATTTCAAAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: WGYKGPSVGRETLTFCSVWDLSS*EISKVQ Trigger: CTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCCA...CACTGAGCAAAAGGTGAGGGTCTCTCTTCCTACACTGGGTCCTTTGTAGCCCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGTGTGTAAAGGGCTGGTaGCCAAACAGATTGTCACTT | + |
|
Preference number: 5 (lower is better) Translates to: DLIALGPIFCSNSDQGRECVKGW*PNRLSL Trigger: AAGTGACAATCTGTTTGGCAACCAGCCCTTTACACA...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS-3UTR CAA 90 bp | AATACTTTGTCCATTCCAGAGAAGAAGTGCCCTAGGGCAGTGTCTTCTGAAATACTCTTACTGCCAGGCTaGGGACCTCTCTTCTTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: NTLSIPEKKCPRAVSSEILLLPG*GPLFFG Trigger: TCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGAG...TATTTCAGAAGACACTGCCCTAGGGCACTTCTTCTCTGGAATGGACAAAGTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000000087.13 |
||
| CDS-3UTR CAA 90 bp | GACCTAATTGCATTAGGCCCCATCTTTTGCAGCAATTCTGACCAGGGCAGGGAGAATTTCATGCTGATCTaGAACTCATTACTTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: DLIALGPIFCSNSDQGRENFMLI*NSLLGG Trigger: ACCTCCAAGTAATGAGTTCAAGATCAGCATGAAATT...CTCCCTGCCCTGGTCAGAATTGCTGCAAAAGATGGGGCCTAATGCAATTAGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106301.8 |
||
| CDS TCA 90 bp | ACTTCTGCGCCTCGAACTTCTCCAATAGTGGCTGGGCAAATGAAATaGGGGTTCTTTCTGTCTACAGCTTCTAACTTCATTCCCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: TSAPRTSPIVAGQMK*GFFLSTASNFIPIL Trigger: CAAAATGGGAATGAAGTTAGAAGCTGTAGACAGAAAGAACCCTCATTTCATTTGCCCAGCCACTATTGGAGAAGTTCGAGGCGCAGAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | TTCCCGGACAAACTGCATCACATCCTCCACTGTCCATaGGGAGGGGTCCCGGCCACTCAGGCGAGGGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: FPDKLHHILHCP*GGVPATQARGI Trigger: GATCCCCCTCGCCTGAGTGGCCGGGACCCCTCCTCATGGACAGTGGAGGATGTGATGCAGTTTGTCCGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CCA 72 bp | CGGCTGTGGGGGCCTGCATGGCTGAACTTGGGACGGTaGCAGCATCTTGAGGAACAGTGCTGGTGTCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: RLWGPAWLNLGR*QHLEEQCWCPV Trigger: AACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGCCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122860.2 |
||
| CDS TCA 72 bp | GCCTGCATGGCTGAACTTGGGACGGTGGCAGCATCTTaGGGAACAGTGCTGGTGTCCGGTTCAGGGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: ACMAELGTVAAS*GTVLVSGSGVL Trigger: CAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CAA 72 bp | GAACAGTGCTGGTGTCCGGTTCAGGGGTGCTGGTTGTaGGTGAGGTGGGTGGTGGGCTCAGCAAAGTCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: EQCWCPVQGCWL*VRWVVGSAKSE Trigger: CTCGGACTTTGCTGAGCCCACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CAA 72 bp | GGTCAAACACGGCTGTGGGGGCCTGCATGGCTGAACTaGGGACGGTGGCAGCATCTTGAGGAACAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GQTRLWGPAWLN*GRWQHLEEQCW Trigger: CCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGCCGTGTTTGACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122860.2 |
||
| CDS TCA 72 bp | TTCCCGGTCAAACACGGCTGTGGGGGCCTGCATGGCTaGACTTGGGACGGTGGCAGCATCTTGAGGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: FPVKHGCGGLHG*TWDGGSILRNS Trigger: ACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGCCGTGTTTGACCGGGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122860.2 |
||
| CDS CCA 72 bp | CTTGAGGAACAGTGCTGGTGTCCGGTTCAGGGGTGCTaGTTGTTGGTGAGGTGGGTGGTGGGCTCAGCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LEEQCWCPVQGC*LLVRWVVGSAK Trigger: CTTTGCTGAGCCCACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CAA 90 bp | CATCTTGAGGAACAGTGCTGGTGTCCGGTTCAGGGGTGCTGGTTGTaGGTGAGGTGGGTGGTGGGCTCAGCAAAGTCCGAGGTTTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: HLEEQCWCPVQGCWL*VRWVVGSAKSEVSS Trigger: AGAGGAAACCTCGGACTTTGCTGAGCCCACCACCCACCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS TCA 72 bp | CGCTTCTTTCCTGGTTTGCGGCCCCTCTGCCCTGGCTaGTGCTCCAAGACAGTTTTGGTGCTGTGGATGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RFFPGLRPLCPG*CSKTVLVLWML Trigger: CAGCATCCACAGCACCAAAACTGTCTTGGAGCATCAGCCAGGGCAGAGGGGCCGCAAACCAGGAAAGAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CCA 72 bp | AACTTGGGACGGTGGCAGCATCTTGAGGAACAGTGCTaGTGTCCGGTTCAGGGGTGCTGGTTGTTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: NLGRWQHLEEQC*CPVQGCWLLVR Trigger: CCTCACCAACAACCAGCACCCCTGAACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CCA 72 bp | AAACTGTGGGGGCCTGCATGGCTGAACTTGGGACGGTaGCAGCATCTTGAGGAACAGTGCTGGTGTCCGGTT | + |
|
Preference number: 6 (lower is better) Translates to: KLWGPAWLNLGR*QHLEEQCWCPV Trigger: AACCGGACACCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CAA 72 bp | GGGAAGCAAGGGCCGATAGCCAGGAGTCCGAAGGTTTaGGGATGTGCTGACAAGGTTGGCAGGCTTCAAGGC | + |
|
Preference number: 6 (lower is better) Translates to: GKQGPIARSPKV*GCADKVGRLQG Trigger: GCCTTGAAGCCTGCCAACCTTGTCAGCACATCCCAAAACCTTCGGACTCCTGGCTATCGGCCCTTGCTTCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | AAGGTTGGCAGGCTTCAAGGCAGAATCCATCAGGTCTaGGTGTGTCTCCAAGGACCGGGCCAGGCTATTCCC | + |
|
Preference number: 6 (lower is better) Translates to: KVGRLQGRIHQV*VCLQGPGQAIP Trigger: GGGAATAGCCTGGCCCGGTCCTTGGAGACACACTCAGACCTGATGGATTCTGCCTTGAAGCCTGCCAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS CAA 72 bp | AGTAGATACAAACTGTGGGGGCCTGCATGGCTGAACTaGGGACGGTGGCAGCATCTTGAGGAACAGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRYKLWGPAWLN*GRWQHLEEQCW Trigger: CCAGCACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTGTATCTACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CCA 72 bp | TCCCGGTCAAACACGGCTGAAATGACTTCACCGCCGTaGCCCTGTTTGAGGAAGCTGAAGACAGTTTTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSNTAEMTSPP*PCLRKLKTVFW Trigger: CCAGAAAACTGTCTTCAGCTTCCTCAAACAGGGCCACGGCGGTGAAGTCATTTCAGCCGTGTTTGACCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CAA 72 bp | CCAGGAGTCCGAAGGTTTTGGGATGTGCTGACAAGGTaGGCAGGCTTCAAGGCAGAATCCATCAGGTCTGAG | + |
|
Preference number: 6 (lower is better) Translates to: PGVRRFWDVLTR*AGFKAESIRSE Trigger: CTCAGACCTGATGGATTCTGCCTTGAAGCCTGCCAACCTTGTCAGCACATCCCAAAACCTTCGGACTCCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | GTTCAAGTAGATACAAACTGTGGGGGCCTGCATGGCTaGACTTGGGACGGTGGCAGCATCTTGAGGAACAGT | + |
|
Preference number: 6 (lower is better) Translates to: VQVDTNCGGLHG*TWDGGSILRNS Trigger: ACTGTTCCTCAAGATGCTGCCACCGTCCCAAGTTCAGCCATGCAGGCCCCCACAGTTTGTATCTACTTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | TCATGTTTTCGGAAGAGGTCAGCATGGGATCCAAGCTaGGGATCGGCTTCCCGGACAAACTGCATCACATCC | + |
|
Preference number: 6 (lower is better) Translates to: SCFRKRSAWDPS*GSASRTNCITS Trigger: GGATGTGATGCAGTTTGTCCGGGAAGCCGATCCTCAGCTTGGATCCCATGCTGACCTCTTCCGAAAACATGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CCA 72 bp | GGACGGATTCTTTGGAATCACAACTTTGGTGCCAGGTaGCTGCAGGTTATCTCCAGTCAAAGAACACCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: GRILWNHNFGAR*LQVISSQRTPA Trigger: GGCTGGTGTTCTTTGACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCCGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS GCA 72 bp | GGATTCTTTGGAATCACAACTTTGGTGCCAGGTGGCTaGAGGTTATCTCCAGTCAAAGAACACCAGCCCACA | + |
|
Preference number: 6 (lower is better) Translates to: GFFGITTLVPGG*RLSPVKEHQPT Trigger: TGTGGGCTGGTGTTCTTTGACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CCA 72 bp | CAGATGAAGGGGACGGATTCTTTGGAATCACAACTTTaGTGCCAGGTGGCTGCAGGTTATCTCCAGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: QMKGTDSLESQL*CQVAAGYLQSK Trigger: CTTTGACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTTCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | GGGACCTCTCTTCTTTGGAAATTTCAAAGGTTCAGCTaGCTTGGATGGGGTAGAGGTGGGATGGGGAATAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTSLLWKFQRFS*LGWGRGGMGNK Trigger: CTTATTCCCCATCCCACCTCTACCCCATCCAAGTCAGCTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS GCA 72 bp | ATGAAGGGGACGGATTCTTTGGAATCACAACTTTGGTaGCAGGTGGCTGCAGGTTATCTCCAGTCAAAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: MKGTDSLESQLW*QVAAGYLQSKN Trigger: GTTCTTTGACTGGAGATAACCTGCAGCCACCTGGCACCAAAGTTGTGATTCCAAAGAATCCGTCCCCTTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CAA 72 bp | GTTTCCTCTTACTGCCAGGCTTGGGACCTCTCTTCTTaGGAAATTTCAAAGGTTCAGCTGACTTGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VSSYCQAWDLSS*EISKVQLTWMG Trigger: CCCCATCCAAGTCAGCTGAACCTTTGAAATTTCCAAAGAAGAGAGGTCCCAAGCCTGGCAGTAAGAGGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 ENSMUST00000122860.2 |
||
| CDS TCA 72 bp | TGTGGGAAGGTGATGGTGGCTCCTTATGGAAAATCTTaGTGGGAGCCATCTCTGCTCCATTTAGTGTCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CGKVMVAPYGKS*WEPSLLHLVSS Trigger: TGAAGACACTAAATGGAGCAGAGATGGCTCCCATCAAGATTTTCCATAAGGAGCCACCATCACCTTCCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | TCTCGGCTCTCCAGATGTCGATCTGACCCTGGGGAATaGTTTAGTTTCCAAAATGACTCCACATCCCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SRLSRCRSDPGE*FSFQNDSTSLL Trigger: AAGAAGGGATGTGGAGTCATTTTGGAAACTAAATCATTCCCCAGGGTCAGATCGACATCTGGAGAGCCGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CAA 72 bp | TTGTGGGAAGGTGATGGTGGCTCCTTATGGAAAATCTaGATGGGAGCCATCTCTGCTCCATTTAGTGTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: LWEGDGGSLWKI*MGAISAPFSVF Trigger: GAAGACACTAAATGGAGCAGAGATGGCTCCCATCAAGATTTTCCATAAGGAGCCACCATCACCTTCCCACAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS TCA 72 bp | CCTCGAACTTCTCCAATAGTGGCTGGGCAAATGAAATaGGGGTTCTTTCTGTCTACAGCTTCTAACTTCATT | + |
|
Preference number: 6 (lower is better) Translates to: PRTSPIVAGQMK*GFFLSTASNFI Trigger: AATGAAGTTAGAAGCTGTAGACAGAAAGAACCCTCATTTCATTTGCCCAGCCACTATTGGAGAAGTTCGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||
| CDS CAA 90 bp | TTCTTTCTGTCTACAGCTTCTAACTTCATTCCCATTTTGAAGAAGTaGTGGGAAGGTGATGGTGGCTCCTTATGGAAAATCTTGATGGGA | + |
|
Preference number: 6 (lower is better) Translates to: FFLSTASNFIPILKK*WEGDGGSLWKILMG Trigger: TCCCATCAAGATTTTCCATAAGGAGCCACCATCACCTTCCCACAACTTCTTCAAAATGGGAATGAAGTTAGAAGCTGTAGACAGAAAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000000087.13 ENSMUST00000064991.13 ENSMUST00000106298.10 ENSMUST00000106301.8 |
||