Pregenerated sensors for SCLY (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026307Ensembl transcript IDs: ENSMUST00000027532.13, ENSMUST00000124832.8, ENSMUST00000137074.3, ENSMUST00000142488.8, ENSMUST00000145843.3, ENSMUST00000147523.8, ENSMUST00000154045.8
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TCTGTGTGCACCAGGACTCGGGGCAGCCCCGAGGCAGCCCGGATCTaGTTCAGGGCTTTAATTCGCCGACTGATCTCGGAGACAGGCATG | + |
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Preference number: 1 (lower is better) Translates to: SVCTRTRGSPEAARI*FRALIRRLISETGM Trigger: CATGCCTGTCTCCGAGATCAGTCGGCGAATTAAAGCCCTGAACCAGATCCGGGCTGCCTCGGGGCTGCCCCGAGTCCTGGTGCACACAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR CCA 90 bp | AGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCCGATAACTaGAATATTCCTATTCCCCTGTGGCCTTTGTCAGAAGGTGACAGG | + |
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Preference number: 1 (lower is better) Translates to: RCLLGSGGPGRLPDN*NIPIPLWPLSEGDR Trigger: CCTGTCACCTTCTGACAAAGGCCACAGGGGAATAGGAATATTCCAGTTATCGGGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CCA 90 bp | CATACAGAGCACCGATCCTGGGGCCGTAGAACTTATGTCCCACGATaGTCAGGAAGTCCACGCCCAGGTCTTCGACATCCACTCGCCTCT | + |
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Preference number: 1 (lower is better) Translates to: HTEHRSWGRRTYVPR*SGSPRPGLRHPLAS Trigger: AGAGGCGAGTGGATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGACATAAGTTCTACGGCCCCAGGATCGGTGCTCTGTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR GCA 90 bp | TCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTaGCCGATAACTGGAATATTCCTATTCCCCTGTGGCCTTTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: SSDQGAFWGQAVLAG*PITGIFLFPCGLCQ Trigger: CTGACAAAGGCCACAGGGGAATAGGAATATTCCAGTTATCGGGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR TCA 90 bp | TTGTCAGAAGGTGACAGGGAGAAGTCCTATGTGACATGGCTGTCCTaGGCTTGTAAGGATGGGTGCTGGGGTGGGATTCTGTGCGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: LSEGDREKSYVTWLS*ACKDGCWGGILCGG Trigger: CCCACCGCACAGAATCCCACCCCAGCACCCATCCTTACAAGCTCAGGACAGCCATGTCACATAGGACTTCTCCCTGTCACCTTCTGACAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR TCA 90 bp | TTCCCCTGTGGCCTTTGTCAGAAGGTGACAGGGAGAAGTCCTATGTaGCATGGCTGTCCTGAGCTTGTAAGGATGGGTGCTGGGGTGGGA | + |
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Preference number: 1 (lower is better) Translates to: FPCGLCQKVTGRSPM*HGCPELVRMGAGVG Trigger: TCCCACCCCAGCACCCATCCTTACAAGCTCAGGACAGCCATGTCACATAGGACTTCTCCCTGTCACCTTCTGACAAAGGCCACAGGGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CCA 90 bp | ACTAAATTATTTGACTCGGTGCCCCCAGAAGTGAAGATGATGTCCTaGGGCTTTCCACCTATCATCTTGGCCAGGCTCGCTCGAGCTGCA | + |
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Preference number: 1 (lower is better) Translates to: TKLFDSVPPEVKMMS*GFPPIILARLARAA Trigger: TGCAGCTCGAGCGAGCCTGGCCAAGATGATAGGTGGAAAGCCCCAGGACATCATCTTCACTTCTGGGGGCACCGAGTCAAATAATTTAGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR GCA 90 bp | CCCTCTTCTGGGCTGTGCTGGTCAACCATGTTCCCCTTCAGGGTCTaGTGTTCATGGAAGCATCTTACCATAGAGTGGATTACTAAATTA | + |
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Preference number: 1 (lower is better) Translates to: PSSGLCWSTMFPFRV*CSWKHLTIEWITKL Trigger: TAATTTAGTAATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAACATGGTTGACCAGCACAGCCCAGAAGAGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR CCA 90 bp | GGGCTGTGCTGGTCAACCATGTTCCCCTTCAGGGTCTGCTGTTCATaGAAGCATCTTACCATAGAGTGGATTACTAAATTATTTGACTCG | + |
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Preference number: 1 (lower is better) Translates to: GLCWSTMFPFRVCCS*KHLTIEWITKLFDS Trigger: CGAGTCAAATAATTTAGTAATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAACATGGTTGACCAGCACAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR CCA 90 bp | TTCCCCTTCAGGGTCTGCTGTTCATGGAAGCATCTTACCATAGAGTaGATTACTAAATTATTTGACTCGGTGCCCCCAGAAGTGAAGATG | + |
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Preference number: 1 (lower is better) Translates to: FPFRVCCSWKHLTIE*ITKLFDSVPPEVKM Trigger: CATCTTCACTTCTGGGGGCACCGAGTCAAATAATTTAGTAATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCAGACCAAGGTGCCTTCTaGGGTCAGGCGGTCCTGGCA | + |
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Preference number: 2 (lower is better) Translates to: GDKAWDICGPSGQGGRWADQGAF*GQAVLA Trigger: TGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTC...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR-3UTR CCA 90 bp | GGCTGCACTGGAGAAGGGTGTGTCTGTAGGTGCACAGGGGAAGCACGGGGGTGGTGGGATTCTGTGCGGTaGGCAGCCCCTCGTCACTCT | + |
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Preference number: 2 (lower is better) Translates to: GCTGEGCVCRCTGEARGWWDSVR*AAPRHS Trigger: AGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCA...CCACCCCCGTGCTTCCCCTGTGCACCTACAGACACACCCTTCTCCAGTGCAGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR-3UTR CCA 90 bp | GGCCAGCATGATGGTCACAAGGCATGTGGTGGGACGGACAGCCGCCAGGATATCCCAGGGGCAGCCGGATaGAGTCGTGTTCCACTGTGC | + |
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Preference number: 2 (lower is better) Translates to: GQHDGHKACGGTDSRQDIPGAAG*SRVPLC Trigger: GCACAGTGGAACACGACTCCATCCGGCTGCCCCTGG...GATATCCTGGCGGCTGTCCGTCCCACCACATGCCTTGTGACCATCATGCTGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCAGGGAGAAGTCCTATGTaGCATGGCTGTCCTGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: GDKAWDICGPSGQGGRWAGRSPM*HGCPEL Trigger: AAGCTCAGGACAGCCATGTCACATAGGACTTCTCCC...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CAA 90 bp | CGCCGACTGATCTCGGAGACAGGCATGATGACGCCGGTCTCATTATaGGCCAGCATGATGGTCACAAGGCATGTGGTGGGACGGACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RRLISETGMMTPVSL*ASMMVTRHVVGRTA Trigger: GGCTGTCCGTCCCACCACATGCCTTGTGACCATCATGCTGGCCAATAATGAGACCGGCGTCATCATGCCTGTCTCCGAGATCAGTCGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGTGCTCCAGGGGCAGCCGGATGGAGTCGTGTTCCACTGTGCAAGTGATACCTGGTCCCCTCTTCTaGGCTGTGCTGGTCAACCAT | + |
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Preference number: 2 (lower is better) Translates to: TRCSRGSRMESCSTVQVIPGPLF*AVLVNH Trigger: ATGGTTGACCAGCACAGCCCAGAAGAGGGGACCAGG...TATCACTTGCACAGTGGAACACGACTCCATCCGGCTGCCCCTGGAGCACCTGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR TCA 90 bp | GTCCCACGATGGTCAGGAAGTCCACGCCCAGGTCTTCGACATCCACTCGCCTCTCATTATTGGCCAGCATaGTGGTCACAAGGCATGTGG | + |
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Preference number: 2 (lower is better) Translates to: VPRWSGSPRPGLRHPLASHYWPA*WSQGMW Trigger: CCACATGCCTTGTGACCATCATGCTGGCCAATAATG...AGAGGCGAGTGGATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR CCA 90 bp | CGTAGAACTTATGTCCCACGATGGTCAGGAAGTCCACGCCCAGGTCTTCGACATTCTTCTGGGCTGTGCTaGTCAACCATGTTCCCCTTC | + |
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Preference number: 2 (lower is better) Translates to: RRTYVPRWSGSPRPGLRHSSGLC*STMFPF Trigger: GAAGGGGAACATGGTTGACCAGCACAGCCCAGAAGA...ATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGACATAAGTTCTACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR TCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCTTGGGTTTTGTCTTCTaGCCAAGGTGCCTTCTGGGG | + |
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Preference number: 2 (lower is better) Translates to: EMIRFPTLAKTELRHQPPLGFVF*PRCLLG Trigger: CCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAA...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR-3UTR TCA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAACTGGAGGTGGATCCCTaGGTAGAAGGCAGGGTAAGC | + |
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Preference number: 2 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQLEVDP*VEGRVS Trigger: GCTTACCCTGCCTTCTACTCAGGGATCCACCTCCAG...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR-3UTR TCA 90 bp | ACAGGCATGATGACGCCGGTCTCATTATTGGCCAGCATGATGGTCACAAGGCATGTGACCTCTGCCATTTaGTTTTCCACCAGGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: TGMMTPVSLLASMMVTRHVTSAI*FSTRCS Trigger: GGAGCACCTGGTGGAAAATCAAATGGCAGAGGTCAC...ATGCCTTGTGACCATCATGCTGGCCAATAATGAGACCGGCGTCATCATGCCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR TCA 90 bp | TCCCACGATGGTCAGGAAGTCCACGCCCAGGTCTTCGACATCCACTCGCCTCTTACACTGGGACAAAAGTaGCCTCTGCCATTTGATTTT | + |
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Preference number: 2 (lower is better) Translates to: SHDGQEVHAQVFDIHSPLTLGQK*PLPFDF Trigger: AAAATCAAATGGCAGAGGTCACTTTTGTCCCAGTGT...AAGAGGCGAGTGGATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR TCA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAAAATCTGAGCGAGAAATaGTCAGATTTCCCACTTTGG | + |
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Preference number: 2 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQNLSEK*SDFPLW Trigger: CCAAAGTGGGAAATCTGATCATTTCTCGCTCAGATT...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CAA 90 bp | GTTCATTTAATTTCTGACAACTGTTTTCACGGGTTGCGTCATCCTTaGGTCCACAGACCCAAAAAGCAGCCTCCAGGAAGACATTCCTAT | + |
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Preference number: 2 (lower is better) Translates to: VHLISDNCFHGLRHP*VHRPKKQPPGRHSY Trigger: ATAGGAATGTCTTCCTGGAGGCTGCTTTTTGGGTCTGTGGACCAAAGGATGACGCAACCCGTGAAAACAGTTGTCAGAAATTAAATGAAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CAA 90 bp | CATGTTTCATTAGTTCATTTAATTTCTGACAACTGTTTTCACGGGTaGCGTCATCCTTTGGTCCACAGACCCAAAAAGCAGCCTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: HVSLVHLISDNCFHG*RHPLVHRPKKQPPG Trigger: TCCTGGAGGCTGCTTTTTGGGTCTGTGGACCAAAGGATGACGCAACCCGTGAAAACAGTTGTCAGAAATTAAATGAACTAATGAAACATG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CCA 72 bp | ACCAGGACTCGGGGCAGCCCCGAGGCAGCCCGGATCTaGTTCAGGGCTTTAATTCGCCGACTGATCTCGGAG | + |
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Preference number: 3 (lower is better) Translates to: TRTRGSPEAARI*FRALIRRLISE Trigger: CTCCGAGATCAGTCGGCGAATTAAAGCCCTGAACCAGATCCGGGCTGCCTCGGGGCTGCCCCGAGTCCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR GCA 72 bp | GGTGGGACGGACAGCCGCCAGGATATCCTCGACCTCTaGCTGCCCATTCACCTTCGACACTGGGACAAAAGT | + |
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Preference number: 3 (lower is better) Translates to: GGTDSRQDILDL*LPIHLRHWDKS Trigger: ACTTTTGTCCCAGTGTCGAAGGTGAATGGGCAGGCAGAGGTCGAGGATATCCTGGCGGCTGTCCGTCCCACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR CCA 72 bp | CACCGATCCTGGGGCCGTAGAACTTATGTCCCACGATaGTCAGGAAGTCCACGCCCAGGTCTTCGACATCCA | + |
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Preference number: 3 (lower is better) Translates to: HRSWGRRTYVPR*SGSPRPGLRHP Trigger: TGGATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGACATAAGTTCTACGGCCCCAGGATCGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR TCA 72 bp | GGTGACAGGGAGAAGTCCTATGTGACATGGCTGTCCTaGGCTTGTAAGGATGGGTGCTGGGGTGGGATTCTG | + |
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Preference number: 3 (lower is better) Translates to: GDREKSYVTWLS*ACKDGCWGGIL Trigger: CAGAATCCCACCCCAGCACCCATCCTTACAAGCTCAGGACAGCCATGTCACATAGGACTTCTCCCTGTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CCA 72 bp | TTTGACTCGGTGCCCCCAGAAGTGAAGATGATGTCCTaGGGCTTTCCACCTATCATCTTGGCCAGGCTCGCT | + |
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Preference number: 3 (lower is better) Translates to: FDSVPPEVKMMS*GFPPIILARLA Trigger: AGCGAGCCTGGCCAAGATGATAGGTGGAAAGCCCCAGGACATCATCTTCACTTCTGGGGGCACCGAGTCAAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR TCA 72 bp | CTGCCTGCCCATTCACCTTCGACACTGGGACAAAAGTaGCCTCTGCCATTTGATTTTCCACCAGGTGCTCCA | + |
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Preference number: 3 (lower is better) Translates to: LPAHSPSTLGQK*PLPFDFPPGAP Trigger: TGGAGCACCTGGTGGAAAATCAAATGGCAGAGGTCACTTTTGTCCCAGTGTCGAAGGTGAATGGGCAGGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR-3UTR CAA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAAATTCCCCTGTGGCCTTaGTCAGAAGGTGACAGGGAG | + |
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Preference number: 3 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQIPLWP*SEGDRE Trigger: CTCCCTGTCACCTTCTGACAAAGGCCACAGGGGAAT...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR GCA 72 bp | GGGCTGTGCTGGTCAACCATGTTCCCCTTCAGGGTCTaGTGTTCATGGAAGCATCTTACCATAGAGTGGATT | + |
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Preference number: 3 (lower is better) Translates to: GLCWSTMFPFRV*CSWKHLTIEWI Trigger: AATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAACATGGTTGACCAGCACAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR CCA 72 bp | ATCCTCGACCTCTGCCTGCCCATTCACCTTCGACACTaGGACAAAAGTGACCTCTGCCATTTGATTTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: ILDLCLPIHLRH*DKSDLCHLIFH Trigger: GTGGAAAATCAAATGGCAGAGGTCACTTTTGTCCCAGTGTCGAAGGTGAATGGGCAGGCAGAGGTCGAGGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| 3UTR TCA 72 bp | GAATATTCCTATTCCCCTGTGGCCTTTGTCAGAAGGTaGCAGGGAGAAGTCCTATGTGACATGGCTGTCCTG | + |
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Preference number: 3 (lower is better) Translates to: EYSYSPVAFVRR*QGEVLCDMAVL Trigger: CAGGACAGCCATGTCACATAGGACTTCTCCCTGTCACCTTCTGACAAAGGCCACAGGGGAATAGGAATATTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR GCA 72 bp | AGGAAGACATTCCTATATAAACCTTGGTGCGATGTGTaGCACACATCCTTAAGATGGCACAGCCTTTTGCAA | + |
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Preference number: 3 (lower is better) Translates to: RKTFLYKPWCDV*HTSLRWHSLLQ Trigger: TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTTATATAGGAATGTCTTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| 3UTR CCA 72 bp | TGGTCAACCATGTTCCCCTTCAGGGTCTGCTGTTCATaGAAGCATCTTACCATAGAGTGGATTACTAAATTA | + |
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Preference number: 3 (lower is better) Translates to: WSTMFPFRVCCS*KHLTIEWITKL Trigger: TAATTTAGTAATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAACATGGTTGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
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| CDS-3UTR CCA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCAGATCCACATCAGCCCTaGTGGTACCGCGGCCCACGC | + |
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Preference number: 4 (lower is better) Translates to: GDKAWDICGPSGQGGRWADPHQP*WYRGPR Trigger: GCGTGGGCCGCGGTACCACCAGGGCTGATGTGGATC...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | ATGGGTGCTGGGGTGGGATTCTGTGCGGTGGGCAGCCCCTCGTCACTCTGCACCTCACAAGGCATGTGGTaGGACGGACAGCCGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: MGAGVGFCAVGSPSSLCTSQGMW*DGQPPG Trigger: TCCTGGCGGCTGTCCGTCCCACCACATGCCTTGTGA...GGTGCAGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCACCCCAGCACCCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | ATGGGTGCTGGGGTGGGATTCTGTGCGGTGGGCAGCCCCTCGTCACTCTGCACCCCTGGTCCCCTCTTCTaGGCTGTGCTGGTCAACCAT | + |
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Preference number: 4 (lower is better) Translates to: MGAGVGFCAVGSPSSLCTPGPLF*AVLVNH Trigger: ATGGTTGACCAGCACAGCCCAGAAGAGGGGACCAGG...GGTGCAGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCACCCCAGCACCCAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR TCA 90 bp | TTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCCTCTTCCCCAGTGCCTaGGCAGCGTCTGTGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: FCLLTKVPSGVRRSWQAALFPSA*AASVCT Trigger: GGTGCACACAGACGCTGCTCAGGCACTGGGGAAGAG...GGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR TCA 90 bp | ATGGGTGCTGGGGTGGGATTCTGTGCGGTGGGCAGCCCCTCGTCACTCTGCACCTCTCGGTCCCTGGCCTaGAATTCCACTCTTGTCCAC | + |
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Preference number: 4 (lower is better) Translates to: MGAGVGFCAVGSPSSLCTSRSLA*NSTLVH Trigger: GTGGACAAGAGTGGAATTTCAGGCCAGGGACCGAGA...GGTGCAGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCACCCCAGCACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR GCA 90 bp | GGCTGCACTGGAGAAGGGTGTGTCTGTAGGTGCACAGGGGAAGCACGGGGGTGGAGTTGGGCCACGGCCTaGTTCAGGTCCTGTACGATG | + |
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Preference number: 4 (lower is better) Translates to: GCTGEGCVCRCTGEARGWSWATA*FRSCTM Trigger: CATCGTACAGGACCTGAAGCAGGCCGTGGCCCAACT...CCACCCCCGTGCTTCCCCTGTGCACCTACAGACACACCCTTCTCCAGTGCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | ATGGGTGCTGGGGTGGGATTCTGTGCGGTGGGCAGCCCCTCGTCACTCTGCACCTTCCACCTATCATCTTaGCCAGGCTCGCTCGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: MGAGVGFCAVGSPSSLCTFHLSS*PGSLEL Trigger: CAGCTCGAGCGAGCCTGGCCAAGATGATAGGTGGAA...GGTGCAGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCACCCCAGCACCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | GGCTGCACTGGAGAAGGGTGTGTCTGTAGGTGCACAGGGGAAGCACGGGGGTGGCAAGGCCAGCAATCATaGGCGTGTTCTCGGTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: GCTGEGCVCRCTGEARGWQGQQS*ACSRSL Trigger: CAGGGACCGAGAACACGCCCATGATTGCTGGCCTTG...CCACCCCCGTGCTTCCCCTGTGCACCTACAGACACACCCTTCTCCAGTGCAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR TCA 90 bp | TTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCAGGACCGTGTACCCTTaGAGCTGGGACCCCTGGATG | + |
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Preference number: 4 (lower is better) Translates to: FCLLTKVPSGVRRSWQAARTVYP*SWDPWM Trigger: CATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCT...GGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCACGTGTTCTCGGTCCCTaGCCTGAAATTCCACTCTTG | + |
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Preference number: 4 (lower is better) Translates to: GDKAWDICGPSGQGGRWARVLGP*PEIPLL Trigger: CAAGAGTGGAATTTCAGGCCAGGGACCGAGAACACG...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS-3UTR CCA 90 bp | GGCTGCACTGGAGAAGGGTGTGTCTGTAGGTGCACAGGGGAAGCACGGGGGTGGACTTATGTCCCACGATaGTCAGGAAGTCCACGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GCTGEGCVCRCTGEARGWTYVPR*SGSPRP Trigger: TGGGCGTGGACTTCCTGACCATCGTGGGACATAAGT...CCACCCCCGTGCTTCCCCTGTGCACCTACAGACACACCCTTCTCCAGTGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GGCTGCACTGGAGAAGGGTGTGTCTGTAGGTGCACAGGGGAAGCACGGGGGTGGGCTGGGACCCCTGGATaGAAAAGTTGCAGGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GCTGEGCVCRCTGEARGWAGTPG*KSCRCL Trigger: CAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGC...CCACCCCCGTGCTTCCCCTGTGCACCTACAGACACACCCTTCTCCAGTGCAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCTCTTCTGGGCTGTGCTaGTCAACCATGTTCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FCLLTKVPSGVRRSWQAASSGLC*STMFPF Trigger: GAAGGGGAACATGGTTGACCAGCACAGCCCAGAAGA...GGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCGCAGCTCAGCAGCACTaGGGATGGCCGGTCCTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPAAQQH*GWPVLV Trigger: CACGAGGACCGGCCATCCCCAGTGCTGCTGAGCTGC...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR TCA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCAACACTGGGACAAAAGTaGCCTCTGCCATTTGATTTT | + |
|
Preference number: 4 (lower is better) Translates to: GDKAWDICGPSGQGGRWATLGQK*PLPFDF Trigger: AAAATCAAATGGCAGAGGTCACTTTTGTCCCAGTGT...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | CACCGGACCAAGACTTGGGTTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGCCCAGGCTTCCTTCATaGCCTCTGTCACAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HRTKTWVLSSDQGAFWGQPRLPS*PLSQPG Trigger: TCCAGGCTGTGACAGAGGCCATGAAGGAAGCCTGGG...CTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAAGTCTTGGTCCGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | TTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCAAGCCTCTCCACTCCTaGAAACCGGCTGTTCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: FCLLTKVPSGVRRSWQAAKPLHS*KPAVQM Trigger: CATTTGAACAGCCGGTTTCCAGGAGTGGAGAGGCTT...GGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | ATGGGTGCTGGGGTGGGATTCTGTGCGGTGGGCAGCCCCTCGTCACTCTGCACCAACCGGCTGTTCAAATaGATTCTCTTACCAAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: MGAGVGFCAVGSPSSLCTNRLFK*ILLPNS Trigger: TGAGTTTGGTAAGAGAATCCATTTGAACAGCCGGTT...GGTGCAGAGTGACGAGGGGCTGCCCACCGCACAGAATCCCACCCCAGCACCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAAAGCCGCCCTTCCAGTTaGGCCACGGCCTGCTTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQSRPSS*ATACFR Trigger: CCTGAAGCAGGCCGTGGCCCAACTGGAAGGGCGGCT...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR TCA 90 bp | CACCGGACCAAGACTTGGGTTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGCATTATTGGCCAGCATaGTGGTCACAAGGCATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTKTWVLSSDQGAFWGQHYWPA*WSQGMW Trigger: CCACATGCCTTGTGACCATCATGCTGGCCAATAATG...CTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAAGTCTTGGTCCGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | CCATTTGATTTTCCACCAGGTGCTCCAGGGGCAGCCGGATGGAGTCGTGTTCCACGGGCTCTAGAGGTGTaGTGGCATTATAGTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: PFDFPPGAPGAAGWSRVPRALEV*WHYSPY Trigger: ATATGGACTATAATGCCACCACACCTCTAGAGCCCG...TGGAACACGACTCCATCCGGCTGCCCCTGGAGCACCTGGTGGAAAATCAAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
||
| CDS-3UTR TCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCGTGACCTCTGCCATTTaGTTTTCCACCAGGTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPVTSAI*FSTRCS Trigger: GGAGCACCTGGTGGAAAATCAAATGGCAGAGGTCAC...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR GCA 90 bp | CACCGGACCAAGACTTGGGTTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGCCTGGATGGAAAAGTTaGAGGTGTTTGGAAGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HRTKTWVLSSDQGAFWGQPGWKS*RCLEAS Trigger: AGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGG...CTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAAGTCTTGGTCCGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | TCCCACGATGGTCAGGAAGTCCACGCCCAGGTCTTCGACATCCACTCGCCTCTTGCTCTAGAGGTGTGGTaGCATTATAGTCCATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHDGQEVHAQVFDIHSPLALEVW*HYSPYR Trigger: TCTATATGGACTATAATGCCACCACACCTCTAGAGC...AAGAGGCGAGTGGATGTCGAAGACCTGGGCGTGGACTTCCTGACCATCGTGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
||
| CDS-3UTR CCA 90 bp | AAATTATTTGACTCGGTGCCCCCAGAAGTGAAGATGATGTCCTGGGGCTTTCCACCCAGGCTTCCTTCATaGCCTCTGTCACAGCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KLFDSVPPEVKMMSWGFPPRLPS*PLSQPG Trigger: TCCAGGCTGTGACAGAGGCCATGAAGGAAGCCTGGG...TGGAAAGCCCCAGGACATCATCTTCACTTCTGGGGGCACCGAGTCAAATAATTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000154045.8 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCACAGAGCACCGATCCTaGGGCCGTAGAACTTATGTC | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPTEHRS*GRRTYV Trigger: GACATAAGTTCTACGGCCCCAGGATCGGTGCTCTGT...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAAGCCTCTGTCACAGCCTaGATGACTTCGGGCTCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQASVTA*MTSGSR Trigger: TCTAGAGCCCGAAGTCATCCAGGCTGTGACAGAGGC...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCGTGCAAGTGATAAAATaGGGCCTGGTCCCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPVQVIK*GLVPSS Trigger: AGAAGAGGGGACCAGGCCCCATTTTATCACTTGCAC...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCAAAGTTGCAGGTGTTTaGAAGCCTCTCCACTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPKVAGV*KPLHSW Trigger: CCAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTT...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| 3UTR CAA 72 bp | GCTCTTGAGATGGGGCAGCTTAGGGACCAAGGGCTTTaGCAAGCGGTTTCCTATGGATCGAGTGGTAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: ALEMGQLRDQGL*QAVSYGSSGKS Trigger: ACTTTTACCACTCGATCCATAGGAAACCGCTTGCAAAAGCCCTTGGTCCCTAAGCTGCCCCATCTCAAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| 3UTR CAA 72 bp | ATGGAATCTGAGCGAGAAATGATCAGATTTCCCACTTaGGCAAAGACTGAGCTCAGGCACCAGCCTCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: MESEREMIRFPT*AKTELRHQPPG Trigger: ACCGGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTCTCGCTCAGATTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCCGGGCTCTAGAGGTGTaGTGGCATTATAGTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPRALEV*WHYSPY Trigger: ATATGGACTATAATGCCACCACACCTCTAGAGCCCG...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCATTTAATTTCTGACAACTGTTTTCACGGGTTGCGTCATCCTTTGGTCCCAGGGGCAGCCGGATaGAGTCGTGTTCCACTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLISDNCFHGLRHPLVPGAAG*SRVPLC Trigger: GCACAGTGGAACACGACTCCATCCGGCTGCCCCTGG...GACCAAAGGATGACGCAACCCGTGAAAACAGTTGTCAGAAATTAAATGAACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| 3UTR CAA 72 bp | CCCGATAACTGGAATATTCCTATTCCCCTGTGGCCTTaGTCAGAAGGTGACAGGGAGAAGTCCTATGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PDNWNIPIPLWP*SEGDREKSYVT Trigger: TGTCACATAGGACTTCTCCCTGTCACCTTCTGACAAAGGCCACAGGGGAATAGGAATATTCCAGTTATCGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCGCTCTAGAGGTGTGGTaGCATTATAGTCCATATAGA | + |
|
Preference number: 4 (lower is better) Translates to: EMIRFPTLAKTELRHQPPALEVW*HYSPYR Trigger: TCTATATGGACTATAATGCCACCACACCTCTAGAGC...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CCA 90 bp | TTAGTTCATTTAATTTCTGACAACTGTTTTCACGGGTTGCGTCATCCTTTGGTCGTGAAGATGATGTCCTaGGGCTTTCCACCTATCATC | + |
|
Preference number: 4 (lower is better) Translates to: LVHLISDNCFHGLRHPLVVKMMS*GFPPII Trigger: GATGATAGGTGGAAAGCCCCAGGACATCATCTTCAC...GACCAAAGGATGACGCAACCCGTGAAAACAGTTGTCAGAAATTAAATGAACTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| 3UTR CAA 72 bp | TTAGTTCATTTAATTTCTGACAACTGTTTTCACGGGTaGCGTCATCCTTTGGTCCACAGACCCAAAAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVHLISDNCFHG*RHPLVHRPKKQ Trigger: CTGCTTTTTGGGTCTGTGGACCAAAGGATGACGCAACCCGTGAAAACAGTTGTCAGAAATTAAATGAACTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS GCA 90 bp | ATCCACATCAGCCCTGGTGGTACCGCGGCCCACGCTGAGCCGGACTaGATTCCGGGCCACGTCCACAGGAATGCCGCAGCTCAGCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: IHISPGGTAAHAEPD*IPGHVHRNAAAQQH Trigger: GTGCTGCTGAGCTGCGGCATTCCTGTGGACGTGGCCCGGAATGCAGTCCGGCTCAGCGTGGGCCGCGGTACCACCAGGGCTGATGTGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 90 bp | ACAGGAATGCCGCAGCTCAGCAGCACTGGGGATGGCCGGTCCTCGTaGTTTGAGTGGCATGATGCTCCCACACTGGCCAGCAGTGTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGMPQLSSTGDGRSS*FEWHDAPTLASSVR Trigger: CCGGACACTGCTGGCCAGTGTGGGAGCATCATGCCACTCAAATCACGAGGACCGGCCATCCCCAGTGCTGCTGAGCTGCGGCATTCCTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | TTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCGCCGGTCCTCGTGATTaGAGTGGCATGATGCTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: FCLLTKVPSGVRRSWQAAAGPRD*SGMMLP Trigger: TGGGAGCATCATGCCACTCAAATCACGAGGACCGGC...GGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | GGGGACAAGGCATGGGACATCTGCGGACCATCAGGCCAGGGAGGCAGGTGGGCACCTGAAATTCCACTCTaGTCCACCTCCAAACAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GDKAWDICGPSGQGGRWAPEIPL*STSKQH Trigger: ATGCTGTTTGGAGGTGGACAAGAGTGGAATTTCAGG...TGCCCACCTGCCTCCCTGGCCTGATGGTCCGCAGATGTCCCATGCCTTGTCCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 90 bp | ACACTGGCCAGCAGTGTCCGGCACTGTGCAAGGACCGTGTACCCTTaGAGCTGGGACCCCTGGATGGAAAAGTTGCAGGTGTTTGGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLASSVRHCARTVYP*SWDPWMEKLQVFGS Trigger: GCTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTGCACAGTGCCGGACACTGCTGGCCAGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 90 bp | CGGGCTCTAGAGGTGTGGTGGCATTATAGTCCATATAGACCTTCCTaGCCACCCTGGGGCTGGAATTCCCATTGCCGCAGGCTTTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RALEVWWHYSPYRPS*PPWGWNSHCRRLCL Trigger: CAGGCAAAGCCTGCGGCAATGGGAATTCCAGCCCCAGGGTGGTCAGGAAGGTCTATATGGACTATAATGCCACCACACCTCTAGAGCCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142488.8 |
||
| CDS CCA 90 bp | GGCACTGTGCAAGGACCGTGTACCCTTGAAGCTGGGACCCCTGGATaGAAAAGTTGCAGGTGTTTGGAAGCCTCTCCACTCCTGGAAACC | + |
|
Preference number: 5 (lower is better) Translates to: GTVQGPCTLEAGTPG*KSCRCLEASPLLET Trigger: GGTTTCCAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTGCACAGTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | TGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGGCGGTCCTGGCAGGCTGCCCGAGCATTTATAATGTCCTaGGCCTTCCTACCTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: CLLTKVPSGVRRSWQAARAFIMS*AFLPDT Trigger: TGTGTCAGGTAGGAAGGCCAAGGACATTATAAATGC...TCGGGCAGCCTGCCAGGACCGCCTGACCCCAGAAGGCACCTTGGTCAGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | CACCGGACCAAGACTTGGGTTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGACGCCGGTCTCATTATaGGCCAGCATGATGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: HRTKTWVLSSDQGAFWGQTPVSL*ASMMVT Trigger: TGTGACCATCATGCTGGCCAATAATGAGACCGGCGT...CTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAAGTCTTGGTCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | CACCGGACCAAGACTTGGGTTTTGTCTTCTGACCAAGGTGCCTTCTGGGGTCAGCCCTGGATGGAAAAGTaGCAGGTGTTTGGAAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: HRTKTWVLSSDQGAFWGQPWMEK*QVFGSL Trigger: GAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGG...CTGACCCCAGAAGGCACCTTGGTCAGAAGACAAAACCCAAGTCTTGGTCCGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCAAGGACCGTGTACCCTaGAAGCTGGGACCCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: EMIRFPTLAKTELRHQPPKDRVP*KLGPLD Trigger: ATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTT...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 90 bp | TGGGGTTTCCCCAGGCTTCCTTCATGGCCTCTGTCACAGCCTGGATaGCTTCGGGCTCTAGAGGTGTGGTGGCATTATAGTCCATATAGA | + |
|
Preference number: 5 (lower is better) Translates to: WGFPRLPSWPLSQPG*LRALEVWWHYSPYR Trigger: TCTATATGGACTATAATGCCACCACACCTCTAGAGCCCGAAGTCATCCAGGCTGTGACAGAGGCCATGAAGGAAGCCTGGGGAAACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000027532.13 ENSMUST00000124832.8 ENSMUST00000142488.8 ENSMUST00000147523.8 ENSMUST00000154045.8 |
||
| CDS CCA 90 bp | CCCCTGGATGGAAAAGTTGCAGGTGTTTGGAAGCCTCTCCACTCCTaGAAACCGGCTGTTCAAATGGATTCTCTTACCAAACTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PLDGKVAGVWKPLHS*KPAVQMDSLTKLSL Trigger: GAGGCTGAGTTTGGTAAGAGAATCCATTTGAACAGCCGGTTTCCAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | GAAATGATCAGATTTCCCACTTTGGCAAAGACTGAGCTCAGGCACCAGCCTCCCAAAAGTTGCAGGTGTTaGGAAGCCTCTCCACTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EMIRFPTLAKTELRHQPPKSCRC*EASPLL Trigger: CAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTTT...GGGAGGCTGGTGCCTGAGCTCAGTCTTTGCCAAAGTGGGAAATCTGATCATTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS-3UTR CAA 90 bp | AAACCTTGGTGCGATGTGTGCCACACATCCTTAAGATGGCACAGCCTTTTGCAAAGTGACCTCTGCCATTaGATTTTCCACCAGGTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: KPWCDVCHTSLRWHSLLQSDLCH*IFHQVL Trigger: GAGCACCTGGTGGAAAATCAAATGGCAGAGGTCACT...TTGCAAAAGGCTGTGCCATCTTAAGGATGTGTGGCACACATCGCACCAAGGTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS CCA 90 bp | GGGCTGTGCTGGTCAACCATGTTCCCCTTCAGGGTCTGCTGTTCATaGAAGCATCTTACCATAGAGTGGATTACTAAATTATTTGACTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLCWSTMFPFRVCCS*KHLTIEWITKLFDF Trigger: AAAGTCAAATAATTTAGTAATCCACTCTATGGTAAGATGCTTCCATGAACAGCAGACCCTGAAGGGGAACATGGTTGACCAGCACAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137074.3 |
||
| CDS GCA 72 bp | AGCCCTGGTGGTACCGCGGCCCACGCTGAGCCGGACTaGATTCCGGGCCACGTCCACAGGAATGCCGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGGTAAHAEPD*IPGHVHRNAAA Trigger: AGCTGCGGCATTCCTGTGGACGTGGCCCGGAATGCAGTCCGGCTCAGCGTGGGCCGCGGTACCACCAGGGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 72 bp | GATCCACATCAGCCCTGGTGGTACCGCGGCCCACGCTaGGCCGGACTGCATTCCGGGCCACGTCCACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: DPHQPWWYRGPR*AGLHSGPRPQE Trigger: TTCCTGTGGACGTGGCCCGGAATGCAGTCCGGCTCAGCGTGGGCCGCGGTACCACCAGGGCTGATGTGGATC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS TCA 72 bp | CCAGTTGGGCCACGGCCTGCTTCAGGTCCTGTACGATaGGATCCACATCAGCCCTGGTGGTACCGCGGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: PVGPRPASGPVR*DPHQPWWYRGP Trigger: TGGGCCGCGGTACCACCAGGGCTGATGTGGATCTCATCGTACAGGACCTGAAGCAGGCCGTGGCCCAACTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
||
| CDS CAA 90 bp | GAATGCCGCAGCTCAGCAGCACTGGGGATGGCCGGTCCTCGTGATTaGAGTGGCATGATGCTCCCACACTGGCCAGCAGTGTCCGGCACT | + |
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Preference number: 6 (lower is better) Translates to: ECRSSAALGMAGPRD*SGMMLPHWPAVSGT Trigger: AGTGCCGGACACTGCTGGCCAGTGTGGGAGCATCATGCCACTCAAATCACGAGGACCGGCCATCCCCAGTGCTGCTGAGCTGCGGCATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CAA 72 bp | AGCTCAGCAGCACTGGGGATGGCCGGTCCTCGTGATTaGAGTGGCATGATGCTCCCACACTGGCCAGCAGTG | + |
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Preference number: 6 (lower is better) Translates to: SSAALGMAGPRD*SGMMLPHWPAV Trigger: CACTGCTGGCCAGTGTGGGAGCATCATGCCACTCAAATCACGAGGACCGGCCATCCCCAGTGCTGCTGAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CAA 90 bp | ACCTTCCTGACCACCCTGGGGCTGGAATTCCCATTGCCGCAGGCTTaGCCTGTGTCCCAAGTCTGTTCCTTCCTGTCGGGTAGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: TFLTTLGLEFPLPQA*PVSQVCSFLSGRLS Trigger: GGAGAGCCTACCCGACAGGAAGGAACAGACTTGGGACACAGGCAAAGCCTGCGGCAATGGGAATTCCAGCCCCAGGGTGGTCAGGAAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142488.8 |
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| CDS GCA 72 bp | CCACCCTGGGGCTGGAATTCCCATTGCCGCAGGCTTTaGCTGTGTCCCAAGTCTGTTCCTTCCTGTCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: PPWGWNSHCRRL*LCPKSVPSCRV Trigger: TACCCGACAGGAAGGAACAGACTTGGGACACAGGCAAAGCCTGCGGCAATGGGAATTCCAGCCCCAGGGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142488.8 |
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| CDS CAA 72 bp | ACCACCCTGGGGCTGGAATTCCCATTGCCGCAGGCTTaGCCTGTGTCCCAAGTCTGTTCCTTCCTGTCGGGT | + |
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Preference number: 6 (lower is better) Translates to: TTLGLEFPLPQA*PVSQVCSFLSG Trigger: ACCCGACAGGAAGGAACAGACTTGGGACACAGGCAAAGCCTGCGGCAATGGGAATTCCAGCCCCAGGGTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142488.8 |
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| CDS CAA 90 bp | CACACTGGCCAGCAGTGTCCGGCACTGTGCAAGGACCGTGTACCCTaGAAGCTGGGACCCCTGGATGGAAAAGTTGCAGGTGTTTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: HTGQQCPALCKDRVP*KLGPLDGKVAGVWK Trigger: CTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTGCACAGTGCCGGACACTGCTGGCCAGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS TCA 72 bp | AGCAGTGTCCGGCACTGTGCAAGGACCGTGTACCCTTaGAGCTGGGACCCCTGGATGGAAAAGTTGCAGGTG | + |
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Preference number: 6 (lower is better) Translates to: SSVRHCARTVYP*SWDPWMEKLQV Trigger: CACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTGCACAGTGCCGGACACTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CCA 72 bp | GAGACCTCGGTGCCCCCAGAAGTGAAGATGATGTCCTaGGGCTTTCCACCTATCATCTTGGCCAGGCTCGCT | + |
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Preference number: 6 (lower is better) Translates to: ETSVPPEVKMMS*GFPPIILARLA Trigger: AGCGAGCCTGGCCAAGATGATAGGTGGAAAGCCCCAGGACATCATCTTCACTTCTGGGGGCACCGAGGTCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000137074.3 |
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| CDS CAA 72 bp | CAGCAGTGTCCGGCACTGTGCAAGGACCGTGTACCCTaGAAGCTGGGACCCCTGGATGGAAAAGTTGCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QQCPALCKDRVP*KLGPLDGKVAG Trigger: ACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTGCACAGTGCCGGACACTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS TCA 72 bp | CCCAGGCTTCCTTCATGGCCTCTGTCACAGCCTGGATaGCTTCGGGCTCTAGAGGTGTGGTGGCATTATAGT | + |
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Preference number: 6 (lower is better) Translates to: PRLPSWPLSQPG*LRALEVWWHYS Trigger: ACTATAATGCCACCACACCTCTAGAGCCCGAAGTCATCCAGGCTGTGACAGAGGCCATGAAGGAAGCCTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000027532.13 ENSMUST00000124832.8 ENSMUST00000142488.8 ENSMUST00000145843.3 ENSMUST00000147523.8 ENSMUST00000154045.8 |
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| CDS TCA 72 bp | GAGGTGTGGTGGCATTATAGTCCATATAGACCTTCCTaGCCACCCTGGGGCTGGAATTCCCATTGCCGCAGG | + |
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Preference number: 6 (lower is better) Translates to: EVWWHYSPYRPS*PPWGWNSHCRR Trigger: CCTGCGGCAATGGGAATTCCAGCCCCAGGGTGGTCAGGAAGGTCTATATGGACTATAATGCCACCACACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142488.8 |
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| CDS CCA 72 bp | CAAGGACCGTGTACCCTTGAAGCTGGGACCCCTGGATaGAAAAGTTGCAGGTGTTTGGAAGCCTCTCCACTC | + |
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Preference number: 6 (lower is better) Translates to: QGPCTLEAGTPG*KSCRCLEASPL Trigger: GAGTGGAGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACACGGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CAA 72 bp | GAAGCTGGGACCCCTGGATGGAAAAGTTGCAGGTGTTaGGAAGCCTCTCCACTCCTGGAAACCGGCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: EAGTPGWKSCRC*EASPLLETGCS Trigger: TGAACAGCCGGTTTCCAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CCA 72 bp | GGAAGCCTCTCCACTCCTGGAAACCGGCTGTTCAAATaGATTCTCTTACCAAACTCAGCCTCCAGCCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSLSTPGNRLFK*ILLPNSASSLS Trigger: GGAGAGGCTGGAGGCTGAGTTTGGTAAGAGAATCCATTTGAACAGCCGGTTTCCAGGAGTGGAGAGGCTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS CAA 90 bp | TGTACCCTTGAAGCTGGGACCCCTGGATGGAAAAGTTGCAGGTGTTaGGAAGCCTCTCCACTCCTGGAAACCGGCTGTTCAAATGGATTC | + |
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Preference number: 6 (lower is better) Translates to: CTLEAGTPGWKSCRC*EASPLLETGCSNGF Trigger: GAATCCATTTGAACAGCCGGTTTCCAGGAGTGGAGAGGCTTCCAAACACCTGCAACTTTTCCATCCAGGGGTCCCAGCTTCAAGGGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027532.13 |
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| CDS TCA 72 bp | CTGCCTGCCCATTCACCTTCGACACTGGGACAAAAGTaGCCTCTGAGATACAAAACATATATACTGCCATTT | + |
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Preference number: 6 (lower is better) Translates to: LPAHSPSTLGQK*PLRYKTYILPF Trigger: AAATGGCAGTATATATGTTTTGTATCTCAGAGGTCACTTTTGTCCCAGTGTCGAAGGTGAATGGGCAGGCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000124832.8 |
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