Pregenerated sensors for SCLT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059834Ensembl transcript IDs: ENSMUST00000026866.15, ENSMUST00000146125.8, ENSMUST00000148769.8, ENSMUST00000154773.2
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTCTGAGATCCTCGGTCTCCTTCTGTAGTTGCTCGTTTTCCTGCTaGAGCTTCAGCCTCTGCTCGCTGACAAAGCCACAGTTCTCCCTC | + |
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Preference number: 1 (lower is better) Translates to: FLRSSVSFCSCSFSC*SFSLCSLTKPQFSL Trigger: GAGGGAGAACTGTGGCTTTGTCAGCGAGCAGAGGCTGAAGCTTCAGCAGGAAAACGAGCAACTACAGAAGGAGACCGAGGATCTCAGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 ENSMUST00000154773.2 |
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| 3UTR TCA 90 bp | TCGCTGACAAAGCCACAGTTCTCCCTCTCTGACTCCAATACAGTTTaGAGTTTCTGGATCATTTCATGGGAACGTGACATCTCTTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: SLTKPQFSLSDSNTV*SFWIISWERDISSE Trigger: CTCAGAAGAGATGTCACGTTCCCATGAAATGATCCAGAAACTTCAAACTGTATTGGAGTCAGAGAGGGAGAACTGTGGCTTTGTCAGCGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 ENSMUST00000154773.2 |
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| 3UTR CCA 90 bp | ACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTaGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACTAT | + |
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Preference number: 1 (lower is better) Translates to: TSLPHSQQASPCQYV*YNSFPNSTVLSVNY Trigger: ATAGTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026866.15 ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR CCA 90 bp | TGGCTGTCTTTTGTTGAGCTGCCAAAAGATGCCTCAGTTCAACAATaGAATTCCGATTACTGTCCTCCATTTCTCTCAGCTGAACTTCAA | + |
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Preference number: 1 (lower is better) Translates to: WLSFVELPKDASVQQ*NSDYCPPFLSAELQ Trigger: TTGAAGTTCAGCTGAGAGAAATGGAGGACAGTAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR TCA 90 bp | TCAGCTGCCTGTTTAGCTCTTCCAGATGTTTCTCATACTCAGCAATaGGAGGAGGTAAAGAACTTTGCTCATTTATTGAGTCTACTAGTG | + |
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Preference number: 1 (lower is better) Translates to: SAACLALPDVSHTQQ*EEVKNFAHLLSLLV Trigger: CACTAGTAGACTCAATAAATGAGCAAAGTTCTTTACCTCCTCTCATTGCTGAGTATGAGAAACATCTGGAAGAGCTAAACAGGCAGCTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR GCA 90 bp | GCTACACACAATCTTGACTCTAACTGTTTTATACTAGATTGTAACTaGTGTACTCGTCTATCCGACGCTTCTTCTTTTCCTTGTGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: ATHNLDSNCFILDCN*CTRLSDASSFPCAD Trigger: GTCTGCACAAGGAAAAGAAGAAGCGTCGGATAGACGAGTACAGCAGTTACAATCTAGTATAAAACAGTTAGAGTCAAGATTGTGTGTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR GCA 90 bp | TTTCTTGGTTTCTTCTTTCCACCTATTGGCTGTCTTTTGTTGAGCTaGCAAAAGATGCCTCAGTTCAACAATGGAATTCCGATTACTGTC | + |
|
Preference number: 1 (lower is better) Translates to: FLGFFFPPIGCLLLS*QKMPQFNNGIPITV Trigger: GACAGTAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAAACCAAGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR TCA 90 bp | GTAAGTTTCTTGGTTTCTTCTTTCCACCTATTGGCTGTCTTTTGTTaGGCTGCCAAAAGATGCCTCAGTTCAACAATGGAATTCCGATTA | + |
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Preference number: 1 (lower is better) Translates to: VSFLVSSFHLLAVFC*AAKRCLSSTMEFRL Trigger: TAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAAACCAAGAAACTTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR GCA 90 bp | AACTCTTCCACTTTCGATACTGCAACTCTCAGATCTAATCTGGCTTaGCTAAGATGTTTTCGAAGTTTCTCAATCTCCATGTTTTGTTCA | + |
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Preference number: 1 (lower is better) Translates to: NSSTFDTATLRSNLA*LRCFRSFSISMFCS Trigger: TGAACAAAACATGGAGATTGAGAAACTTCGAAAACATCTTAGGCAAGCCAGATTAGATCTGAGAGTTGCAGTATCGAAAGTGGAAGAGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR CAA 90 bp | AATCTGGGCTTCAGTCATATGCTCCTGATAGAGTTTCTGTACACTTaGCAACTCCTGAGAAGCAGTCTGCCAGAGTTCCAGAGCCCAAGT | + |
|
Preference number: 2 (lower is better) Translates to: NLGFSHMLLIEFLYT*QLLRSSLPEFQSPS Trigger: ACTTGGGCTCTGGAACTCTGGCAGACTGCTTCTCAGGAGTTGCAAAGTGTACAGAAACTCTATCAGGAGCATATGACTGAAGCCCAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR CAA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTaGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACTA | + |
|
Preference number: 2 (lower is better) Translates to: HKPSPFSAGFSMSIR*VQQLSQLYSSVSEL Trigger: TAGTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026866.15 ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAAAGTTGCAATTGTTCTTaGAGGATCCTCACGGTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQSCNCS*RILTVS Trigger: TGAGACCGTGAGGATCCTTCAAGAACAATTGCAACT...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCCATTTCCTATCCCTGTaGCAAAGGGAAGGGCTTCCA | + |
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Preference number: 2 (lower is better) Translates to: FSMSIRLVQQLSQLYSSVHFLSL*QREGLP Trigger: TGGAAGCCCTTCCCTTTGGCACAGGGATAGGAAATG...GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR TCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACGGTTTTCAAATTCATaGATCTGGGCTTCAGTCATA | + |
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Preference number: 2 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQRFSNS*IWASVI Trigger: TATGACTGAAGCCCAGATTCATGAATTTGAAAACCG...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR TCA 90 bp | ATCATGGAAGCTGCTTTTCTTCTCTGCACTGTAATCACACTGAGCTGCTGGGACCTCTTGAGTCTTAGCTaGAGATCATCTTTTGAACGT | + |
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Preference number: 2 (lower is better) Translates to: IMEAAFLLCTVITLSCWDLLSLS*RSSFER Trigger: ACGTTCAAAAGATGATCTTCAGCTAAGACTCAAGAG...GTCCCAGCAGCTCAGTGTGATTACAGTGCAGAGAAGAAAAGCAGCTTCCATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR CCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAATTTCCAGATTCATCATaGAAGCTGCTTTTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQFPDSS*KLLFFS Trigger: AGAGAAGAAAAGCAGCTTCCATGATGAATCTGGAAA...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR GCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGGGAGGTAAAGAACTTTaGTCATTTATTGAGTCTACT | + |
|
Preference number: 2 (lower is better) Translates to: NDTSLPHSQQASPCQYVWGGKEL*SFIEST Trigger: AGTAGACTCAATAAATGAGCAAAGTTCTTTACCTCC...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR GCA 90 bp | CCGATTACTGTCCTCCATTTCTCTCAGCTGAACTTCAAACCCATGCTCCTTAATCCTTGCTTTGATAGCTaGATCTTGTATAAGCTGAGA | + |
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Preference number: 2 (lower is better) Translates to: PITVLHFSQLNFKPMLLNPCFDS*ILYKLR Trigger: TCTCAGCTTATACAAGATGCAGCTATCAAAGCAAGG...ATTAAGGAGCATGGGTTTGAAGTTCAGCTGAGAGAAATGGAGGACAGTAATCGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR CAA 90 bp | TTCAGTAAGTTTCTTGGTTTCTTCTTTCCACCTATTGGCTGTCTTTaGTTGAGCTGCCAAAAGATGCCTCAGTTCAACAATGGAATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: FSKFLGFFFPPIGCL*LSCQKMPQFNNGIP Trigger: CGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAAACCAAGAAACTTACTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR TCA 90 bp | CCGATTACTGTCCTCCATTTCTCTCAGCTGAACTTCAAACCCATGCTCCTTAATGCAGCAAGACATCTTTaGTGCATTTCTTCCAATTTT | + |
|
Preference number: 2 (lower is better) Translates to: PITVLHFSQLNFKPMLLNAARHL*CISSNF Trigger: AAAATTGGAAGAAATGCATCAAAGATGTCTTGCTGC...ATTAAGGAGCATGGGTTTGAAGTTCAGCTGAGAGAAATGGAGGACAGTAATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR GCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTAGCCACCTTTTCATTTaGCATTTCCAGTTGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCSHLFI*HFQLRK Trigger: CTTTCTCAACTGGAAATGGCAAATGAAAAGGTGGCT...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR CAA 90 bp | AGTAAGTTTCTTGGTTTCTTCTTTCCACCTATTGGCTGTCTTTTGTaGAGCTGCCAAAAGATGCCTCAGTTCAACAATGGAATTCCGATT | + |
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Preference number: 2 (lower is better) Translates to: SKFLGFFFPPIGCLL*SCQKMPQFNNGIPI Trigger: AATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAAACCAAGAAACTTACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTGCAGCAAGACATCTTTaGTGCATTTCTTCCAATTTT | + |
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Preference number: 2 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCAARHL*CISSNF Trigger: AAAATTGGAAGAAATGCATCAAAGATGTCTTGCTGC...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTTATTTTCTGCACTCTTaGGTCTTAGCTGAAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCYFLHS*VLAEDH Trigger: ATGATCTTCAGCTAAGACTCAAGAGTGCAGAAAATA...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTTTTCCAAATTTGATTTCCCTGTTTTTAGTACATCGGCTTCTTCAATTGCTCCATGTCAATACGTTTaGTACAACAGCTTTCCCAAC | + |
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Preference number: 2 (lower is better) Translates to: CFSKFDFPVFSTSASSIAPCQYV*YNSFPN Trigger: GTTGGGAAAGCTGTTGTACCAAACGTATTGACATGG...AGCAATTGAAGAAGCCGATGTACTAAAAACAGGGAAATCAAATTTGGAAAAGCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR GCA 90 bp | ATATTTTCCAGATTCATCATGGAAGCTGCTTTTCTTCTCTGCACTGTAATCACATTCTTCTTTTCCTTGTaGAGACATAATATCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: IFSRFIMEAAFLLCTVITFFFSL*RHNIFL Trigger: GAGGAAGATATTATGTCTGCACAAGGAAAAGAAGAA...TGTGATTACAGTGCAGAGAAGAAAAGCAGCTTCCATGATGAATCTGGAAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR TCA 72 bp | TCCTCGGTCTCCTTCTGTAGTTGCTCGTTTTCCTGCTaGAGCTTCAGCCTCTGCTCGCTGACAAAGCCACAG | + |
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Preference number: 3 (lower is better) Translates to: SSVSFCSCSFSC*SFSLCSLTKPQ Trigger: CTGTGGCTTTGTCAGCGAGCAGAGGCTGAAGCTTCAGCAGGAAAACGAGCAACTACAGAAGGAGACCGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 ENSMUST00000154773.2 |
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| 3UTR TCA 72 bp | GTGTGGAGGCATGTTCCTGTAATCCCAGTTCTGGAGTaGCAGAGACTCATGTATTTCTGGGGCTGTTGGCCA | + |
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Preference number: 3 (lower is better) Translates to: VWRHVPVIPVLE*QRLMYFWGCWP Trigger: TGGCCAACAGCCCCAGAAATACATGAGTCTCTGTCACTCCAGAACTGGGATTACAGGAACATGCCTCCACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154773.2 |
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| 3UTR-3UTR CAA 90 bp | ATGGAAGCTGCTTTTCTTCTCTGCACTGTAATCACACTGAGCTGCTGGGACGCTGAGTTTCTGTACACTTaGCAACTCCTGAGAAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: MEAAFLLCTVITLSCWDAEFLYT*QLLRSS Trigger: ACTGCTTCTCAGGAGTTGCAAAGTGTACAGAAACTC...AGCGTCCCAGCAGCTCAGTGTGATTACAGTGCAGAGAAGAAAAGCAGCTTCCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR GCA 72 bp | CAATTGTTCTTGAAGGATCCTCACGGTCTCATCATCTaGACAGATGTCATTTCCTATCCCTGTGCCAAAGGG | + |
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Preference number: 3 (lower is better) Translates to: QLFLKDPHGLII*TDVISYPCAKG Trigger: CCCTTTGGCACAGGGATAGGAAATGACATCTGTGCAGATGATGAGACCGTGAGGATCCTTCAAGAACAATTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR CAA 90 bp | CCGATTACTGTCCTCCATTTCTCTCAGCTGAACTTCAAACCCATGCTCCTTAATGGGAAGGGCTTCCAATaGCTTTTCAACAGCATCTTT | + |
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Preference number: 3 (lower is better) Translates to: PITVLHFSQLNFKPMLLNGKGFQ*LFNSIF Trigger: AAAGATGCTGTTGAAAAGCAATTGGAAGCCCTTCCC...ATTAAGGAGCATGGGTTTGAAGTTCAGCTGAGAGAAATGGAGGACAGTAATCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR-3UTR CAA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAATCGATCAATTTGACCTaGCTTTTCATCACAGTCCAT | + |
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Preference number: 3 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQSINLT*LFITVH Trigger: ATGGACTGTGATGAAAAGCAAGGTCAAATTGATCGA...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR CCA 72 bp | TTTCATCCTGTTTGCCTTCACGGTAAATATAAAAGGTaGGTGTGGAGGCATGTTCCTGTAATCCCAGTTCTG | + |
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Preference number: 3 (lower is better) Translates to: FHPVCLHGKYKR*VWRHVPVIPVL Trigger: CAGAACTGGGATTACAGGAACATGCCTCCACACCCACCTTTTATATTTACCGTGAAGGCAAACAGGATGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000154773.2 |
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| 3UTR GCA 72 bp | TTCTTCTTTCCACCTATTGGCTGTCTTTTGTTGAGCTaGCAAAAGATGCCTCAGTTCAACAATGGAATTCCG | + |
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Preference number: 3 (lower is better) Translates to: FFFPPIGCLLLS*QKMPQFNNGIP Trigger: CGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR CCA 72 bp | TTTGTTGAGCTGCCAAAAGATGCCTCAGTTCAACAATaGAATTCCGATTACTGTCCTCCATTTCTCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: FVELPKDASVQQ*NSDYCPPFLSA Trigger: AGCTGAGAGAAATGGAGGACAGTAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR-3UTR CAA 90 bp | TTGTTGAGCTGCCAAAAGATGCCTCAGTTCAACAATGGAATTCCGATTACTGTCAGTCCATTTGAAGGGTaGAGAGTTCTTCCTTTAATT | + |
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Preference number: 3 (lower is better) Translates to: LLSCQKMPQFNNGIPITVSPFEG*RVLPLI Trigger: AATTAAAGGAAGAACTCTCAACCCTTCAAATGGACT...GACAGTAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| 3UTR GCA 72 bp | ACTTTCGATACTGCAACTCTCAGATCTAATCTGGCTTaGCTAAGATGTTTTCGAAGTTTCTCAATCTCCATG | + |
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Preference number: 3 (lower is better) Translates to: TFDTATLRSNLA*LRCFRSFSISM Trigger: CATGGAGATTGAGAAACTTCGAAAACATCTTAGGCAAGCCAGATTAGATCTGAGAGTTGCAGTATCGAAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR GCA 72 bp | AATCTTGACTCTAACTGTTTTATACTAGATTGTAACTaGTGTACTCGTCTATCCGACGCTTCTTCTTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: NLDSNCFILDCN*CTRLSDASSFP Trigger: AGGAAAAGAAGAAGCGTCGGATAGACGAGTACAGCAGTTACAATCTAGTATAAAACAGTTAGAGTCAAGATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| 3UTR GCA 72 bp | TTTTGTGCTTTCAACCTCTTTCCTTGCTTTGATAGCTaGATCTTGTATAAGCTGAGACATTGTTTTCTTCAT | + |
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Preference number: 3 (lower is better) Translates to: FCAFNLFPCFDS*ILYKLRHCFLH Trigger: ATGAAGAAAACAATGTCTCAGCTTATACAAGATGCAGCTATCAAAGCAAGGAAAGAGGTTGAAAGCACAAAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
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| CDS-3UTR TCA 90 bp | CAAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTGAGCTGCTGGGACGCTaGAGCAGCTCTCTCTTCTGC | + |
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Preference number: 4 (lower is better) Translates to: QNDTSLPHSQQASPCQYVELLGR*SSSLFC Trigger: GCAGAAGAGAGAGCTGCTTCAGCGTCCCAGCAGCTC...AACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR GCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGCTAGTGTGTCACCTCTaGCTCCTTTGGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWLVCHL*LLWTCC Trigger: ACAGCATGTCCAAAGGAGGCAGAGGTGACACACTAG...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR GCA 90 bp | ATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTCTAGTGTGTCACCTCTaGCTCCTTTGGACATGCTGT | + |
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Preference number: 4 (lower is better) Translates to: MTQAFPILSRLLHVNTFGLVCHL*LLWTCC Trigger: ACAGCATGTCCAAAGGAGGCAGAGGTGACACACTAG...ACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR GCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGCATTTCCTATCCCTGTaGCAAAGGGAAGGGCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWHFLSL*QREGLP Trigger: TGGAAGCCCTTCCCTTTGGCACAGGGATAGGAAATG...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR TCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTCCATTTCTCTCAGCTaGACTTCAAACCCATGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWSISLS*TSNPCS Trigger: GGAGCATGGGTTTGAAGTTCAGCTGAGAGAAATGGA...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CCA 90 bp | TTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCATCACACTGAGCTGCTaGGACGCTGAAGCAGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: FSMSIRLVQQLSQLYSSVITLSC*DAEAAL Trigger: GAGAGCTGCTTCAGCGTCCCAGCAGCTCAGTGTGAT...GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR TCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGAGTTGCAATTGTTCTTaGAGGATCCTCACGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWSCNCS*RILTVS Trigger: TGAGACCGTGAGGATCCTTCAAGAACAATTGCAACT...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGACACTTTGCAACTCCTaGGAAGCAGTCTGCCAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLTLCNS*EAVCQS Trigger: ACTCTGGCAGACTGCTTCTCAGGAGTTGCAAAGTGT...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | ATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTTCATCACAGTCCATTTaGAGGGTTGAGAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: MTQAFPILSRLLHVNTFGSSQSI*RVESSS Trigger: GGAAGAACTCTCAACCCTTCAAATGGACTGTGATGA...ACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAAACAGTTCTCCCTCTCTaGCTCCAATACAGTTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQTVLPL*LQYSLK Trigger: CTTCAAACTGTATTGGAGTCAGAGAGGGAGAACTGT...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| 3UTR CAA 72 bp | TCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTaGGTACAACAGCTTTCCCAACTCTACAGTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPFSAGFSMSIR*VQQLSQLYSSV Trigger: GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026866.15 ENSMUST00000146125.8 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAAGCTATCTCTGGCTCTTaGAATAGCCTCATATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQAISGS*NSLIFL Trigger: GAGAAATATGAGGCTATTTCAAGAGCCAGAGATAGC...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAATCCTTAATTGAGAACTaGTGCTCCATTGTACTGACC | + |
|
Preference number: 4 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQSLIEN*CSIVLT Trigger: GGTCAGTACAATGGAGCATCAGTTCTCAATTAAGGA...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTTGGCTGTCTTTTGTTaGGCTGCCAAAAGATGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLLAVFC*AAKRCL Trigger: GAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAA...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | AAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTCCCATGCTCCTTAATTaGGAACTGATGCTCCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: KMTQAFPILSRLLHVNTFPMLLN*ELMLHC Trigger: ACAATGGAGCATCAGTTCTCAATTAAGGAGCATGGG...AAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR GCA 90 bp | AAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGCTTCTTCTAAGAGCTaGATGCTATCTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: KMTQAFPILSRLLHVNTFASSKS*MLSLAL Trigger: AAGAGCCAGAGATAGCATGCAGCTCTTAGAAGAAGC...AAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | GGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGCTTCTTCTAAGAGCTaGATGCTATCTCTGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFSMSIRLVQQLSQLYSSASSKS*MLSLAL Trigger: AAGAGCCAGAGATAGCATGCAGCTCTTAGAAGAAGC...AGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACCTTGCTTTGATAGCTaGATCTTGTATAAGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQPCFDS*ILYKLR Trigger: TCTCAGCTTATACAAGATGCAGCTATCAAAGCAAGG...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| 3UTR CAA 72 bp | TTCCACGGCTCTTTTCCCTCTAATGGCTCGATCAATTaGACCTTGCTTTTCATCACAGTCCATTTGAAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: FHGSFPSNGSIN*TLLFITVHLKG Trigger: ACCCTTCAAATGGACTGTGATGAAAAGCAAGGTCAAATTGATCGAGCCATTAGAGGGAAAAGAGCCGTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | TGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACAGTTGCAATTGTTCTTaGAGGATCCTCACGGTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CQYVWYNSFPNSTVLSVNSCNCS*RILTVS Trigger: TGAGACCGTGAGGATCCTTCAAGAACAATTGCAACT...GTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | ATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTGCTATCTCTGGCTCTTaGAATAGCCTCATATTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILSRLLHVNTFGTTAFPTAISGS*NSLIFL Trigger: GAGAAATATGAGGCTATTTCAAGAGCCAGAGATAGC...AGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | AAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTATGGCTCGATCAATTTaGCCTTGCTTTTCATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KMTQAFPILSRLLHVNTFMARSI*PCFSSQ Trigger: CTGTGATGAAAAGCAAGGTCAAATTGATCGAGCCAT...AAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTATTTTCTGCACTCTTaGGTCTTAGCTGAAGATCAT | + |
|
Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWYFLHS*VLAEDH Trigger: ATGATCTTCAGCTAAGACTCAAGAGTGCAGAAAATA...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTTTTGCCATTTCCAGTTaGGAAAGTAGCTCCTGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCFAISS*ESSSWV Trigger: TACCCAGGAGCTACTTTCTCAACTGGAAATGGCAAA...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR GCA 90 bp | AAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTTGTCTTTTGTTGAGCTaGCAAAAGATGCCTCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KMTQAFPILSRLLHVNTFCLLLS*QKMPQF Trigger: GAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACA...AAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGGCCTCAGTTCAACAATaGAATTCCGATTACTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLASVQQ*NSDYCP Trigger: AGGACAGTAATCGGAATTCCATTGTTGAACTGAGGC...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGCTTCTTTCCACCTATTaGCTGTCTTTTGTTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLLLSTY*LSFVEL Trigger: CAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAG...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| 3UTR CAA 72 bp | CTTGGTTTCTTCTTTCCACCTATTGGCTGTCTTTTGTaGAGCTGCCAAAAGATGCCTCAGTTCAACAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFFFPPIGCLL*SCQKMPQFNNG Trigger: TCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAAAAGACAGCCAATAGGTGGAAAGAAGAAACCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000146125.8 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | GCCTCAGTTCAACAATGGAATTCCGATTACTGTCCTCCATTTCTCTCAGCTGAATCTCATACTCAGCAATaGGAGGAGGTAAAGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASVQQWNSDYCPPFLSAESHTQQ*EEVKNF Trigger: AAAGTTCTTTACCTCCTCTCATTGCTGAGTATGAGA...TTCAGCTGAGAGAAATGGAGGACAGTAATCGGAATTCCATTGTTGAACTGAGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGCGGTTTTCAAATTCATaGATCTGGGCTTCAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLRFSNS*IWASVI Trigger: TATGACTGAAGCCCAGATTCATGAATTTGAAAACCG...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGCTCTTGAGTCTTAGCTaGAGATCATCTTTTGAACGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLLLSLS*RSSFER Trigger: ACGTTCAAAAGATGATCTTCAGCTAAGACTCAAGAG...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCCACTCTTTAGACTGCTaGTCCTCATTTCTGCACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSMSIRLVQQLSQLYSSVHSLDC*SSFLHF Trigger: AAAGTGCAGAAATGAGGATCAGCAGTCTAAAGAGTG...GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR GCA 90 bp | TGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACTTGGACATGCTGTTCTaGATAGTTGGGTCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CQYVWYNSFPNSTVLSVNLDMLF*IVGSLK Trigger: TTTCAGAGACCCAACTATGCAGAACAGCATGTCCAA...GTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | TTGTTGAGCTGCCAAAAGATGCCTCAGTTCAACAATGGAATTCCGATTACTGTCTTGGACATGCTGTTCTaGATAGTTGGGTCTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLSCQKMPQFNNGIPITVLDMLF*IVGSLK Trigger: TTTCAGAGACCCAACTATGCAGAACAGCATGTCCAA...GACAGTAATCGGAATTCCATTGTTGAACTGAGGCATCTTTTGGCAGCTCAACAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTTCTTCTTTTCCTTGTaGAGACATAATATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NDTSLPHSQQASPCQYVWFFFSL*RHNIFL Trigger: GAGGAAGATATTATGTCTGCACAAGGAAAAGAAGAA...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | ATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTAGCCACCTTTTCATTTaGCATTTCCAGTTGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILSRLLHVNTFGTTAFPTSHLFI*HFQLRK Trigger: CTTTCTCAACTGGAAATGGCAAATGAAAAGGTGGCT...AGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTTCTGGATCATTTCATaGGAACGTGACATCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLFWIIS*ERDISS Trigger: AGAAGAGATGTCACGTTCCCATGAAATGATCCAGAA...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR CCA 90 bp | TGCTTTTCCAAATTTGATTTCCCTGTTTTTAGTACATCGGCTTCTTCAATTGCTCACCTCTGCCTCCTTTaGACATGCTGCATAGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: CFSKFDFPVFSTSASSIAHLCLL*TCCIVG Trigger: CCCAACTATGCAGCATGTCCAAAGGAGGCAGAGGTG...AGCAATTGAAGAAGCCGATGTACTAAAAACAGGGAAATCAAATTTGGAAAAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCTCTCATACTCAGCAATaGGAGGAGGTAAAGAACTTT | + |
|
Preference number: 4 (lower is better) Translates to: FSMSIRLVQQLSQLYSSVSHTQQ*EEVKNF Trigger: AAAGTTCTTTACCTCCTCTCATTGCTGAGTATGAGA...GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | TTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCCGGTTTTCAAATTCATaGATCTGGGCTTCAGTCATA | + |
|
Preference number: 4 (lower is better) Translates to: FSMSIRLVQQLSQLYSSVRFSNS*IWASVI Trigger: TATGACTGAAGCCCAGATTCATGAATTTGAAAACCG...GACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGGCAGCAAGACATCTTTaGTGCATTTCTTCCAATTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLAARHL*CISSNF Trigger: AAAATTGGAAGAAATGCATCAAAGATGTCTTGCTGC...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR CCA 90 bp | GCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGACTGTTTTCAGGAAGTaGTGGTTAGTCATTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: ASPCQYVWYNSFPNSTVLTVFRK*WLVISM Trigger: CATAGAAATGACTAACCACCACTTCCTGAAAACAGT...CAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR CCA 90 bp | CCGATTACTGTCCTCCATTTCTCTCAGCTGAACTTCAAACCCATGCTCCTTAATACTGTTTTCAGGAAGTaGTGGTTAGTCATTTCTATG | + |
|
Preference number: 4 (lower is better) Translates to: PITVLHFSQLNFKPMLLNTVFRK*WLVISM Trigger: CATAGAAATGACTAACCACCACTTCCTGAAAACAGT...ATTAAGGAGCATGGGTTTGAAGTTCAGCTGAGAGAAATGGAGGACAGTAATCGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTTTTCCAGATTCATCATaGAAGCTGCTTTTCTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: ILSRLLHVNTFGTTAFPTFPDSS*KLLFFS Trigger: AGAGAAGAAAAGCAGCTTCCATGATGAATCTGGAAA...AGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
||
| CDS-3UTR GCA 90 bp | ATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTGGAGGTAAAGAACTTTaGTCATTTATTGAGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: ILSRLLHVNTFGTTAFPTGGKEL*SFIEST Trigger: AGTAGACTCAATAAATGAGCAAAGTTCTTTACCTCC...AGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTAGATCTAATCTGGCTTaGCTAAGATGTTTTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCRSNLA*LRCFRS Trigger: ACTTCGAAAACATCTTAGGCAAGCCAGATTAGATCT...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | TGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACAGATCTAATCTGGCTTaGCTAAGATGTTTTCGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CQYVWYNSFPNSTVLSVNRSNLA*LRCFRS Trigger: ACTTCGAAAACATCTTAGGCAAGCCAGATTAGATCT...GTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTTTCTCATTAGCAACATaGAGTTTCTTGGTTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: GFSMSIRLVQQLSQLYSSFSLAT*SFLVSC Trigger: ACAACTAACCAAGAAACTCCATGTTGCTAATGAGAA...AGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTTTCTTCTTTTCCTTGTaGAGACATAATATCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLHVNTFGTTAFPTLQFCFFFSL*RHNIFL Trigger: GAGGAAGATATTATGTCTGCACAAGGAAAAGAAGAA...ACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
||
| CDS-3UTR CCA 90 bp | ATATTTTCCAGATTCATCATGGAAGCTGCTTTTCTTCTCTGCACTGTAATCACATTCTCATTAGCAACATaGAGTTTCTTGGTTAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFSRFIMEAAFLLCTVITFSLAT*SFLVSC Trigger: ACAACTAACCAAGAAACTCCATGTTGCTAATGAGAA...TGTGATTACAGTGCAGAGAAGAAAAGCAGCTTCCATGATGAATCTGGAAAATAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
||
| 3UTR CAA 72 bp | TTGATTTCCCTGTTTTTAGTACATCGGCTTCTTCAATaGCTACACACAATCTTGACTCTAACTGTTTTATAC | + |
|
Preference number: 4 (lower is better) Translates to: LISLFLVHRLLQ*LHTILTLTVLY Trigger: GTATAAAACAGTTAGAGTCAAGATTGTGTGTAGCAATTGAAGAAGCCGATGTACTAAAAACAGGGAAATCAA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| CDS-3UTR CAA 90 bp | CTTCTCCAGTTCTTCTTCCACGGCTCTTTTCCCTCTAATGGCTCGATCAATTTGTCACCTCTGCCTCCTTaGGACATGCTGCATAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: LLQFFFHGSFPSNGSINLSPLPP*DMLHSW Trigger: CCAACTATGCAGCATGTCCAAAGGAGGCAGAGGTGA...CAAATTGATCGAGCCATTAGAGGGAAAAGAGCCGTGGAAGAAGAACTGGAGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000146125.8 |
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| CDS-3UTR CAA 90 bp | AATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGGGGAAGGGCTTCCAATaGCTTTTCAACAGCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: NDTSLPHSQQASPCQYVWGKGFQ*LFNSIF Trigger: AAAGATGCTGTTGAAAAGCAATTGGAAGCCCTTCCC...CCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAAGAGTTTCTGTACACTTaGCAACTCCTGAGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQEFLYT*QLLRSS Trigger: ACTGCTTCTCAGGAGTTGCAAAGTGTACAGAAACTC...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | CAAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTCTTCAGCATCTGCTCTaGAAGACCTTCAGTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: QNDTSLPHSQQASPCQYVLQHLL*KTFSHF Trigger: AAAGTGACTGAAGGTCTTCAAGAGCAGATGCTGAAG...AACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | ATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTAATGGCTCGATCAATTaGACCTTGCTTTTCATCACA | + |
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Preference number: 5 (lower is better) Translates to: MTQAFPILSRLLHVNTFGNGSIN*TLLFIT Trigger: TGTGATGAAAAGCAAGGTCAAATTGATCGAGCCATT...ACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CAA 90 bp | AGCCACAGTTCTCCCTCTCTGACTCCAATACAGTTTGAAGTTTCTGGATCATTTCTTCAGCATCTGCTCTaGAAGACCTTCAGTCACTTT | + |
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Preference number: 5 (lower is better) Translates to: SHSSPSLTPIQFEVSGSFLQHLL*KTFSHF Trigger: AAAGTGACTGAAGGTCTTCAAGAGCAGATGCTGAAG...AAATGATCCAGAAACTTCAAACTGTATTGGAGTCAGAGAGGGAGAACTGTGGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | GGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTCATCGGCTTCTTCAATaGCTACACACAATCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: GFSMSIRLVQQLSQLYSSHRLLQ*LHTILT Trigger: AGTCAAGATTGTGTGTAGCAATTGAAGAAGCCGATG...AGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | CACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAATTTGATAGCTGCATCTaGTATAAGCTGAGACATTGT | + |
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Preference number: 5 (lower is better) Translates to: HKPSPFSAGFSMSIRLVQFDSCI*YKLRHC Trigger: ACAATGTCTCAGCTTATACAAGATGCAGCTATCAAA...TTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS GCA 90 bp | TCCAGATGTTTCTCATACTCAGCAATGAGAGGAGGTAAAGAACTTTaGTCATTTATTGAGTCTACTAGTGTGTCACCTCTGCCTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: SRCFSYSAMRGGKEL*SFIESTSVSPLPPL Trigger: CAAAGGAGGCAGAGGTGACACACTAGTAGACTCAATAAATGAGCAAAGTTCTTTACCTCCTCTCATTGCTGAGTATGAGAAACATCTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | AAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTTCGATCAATTTGACCTaGCTTTTCATCACAGTCCAT | + |
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Preference number: 5 (lower is better) Translates to: KMTQAFPILSRLLHVNTFSINLT*LFITVH Trigger: ATGGACTGTGATGAAAAGCAAGGTCAAATTGATCGA...AAACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CAA 90 bp | CAAAATGACACAAGCCTTCCCCATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGCAGCAAGACATCTTaGATGCATTTCTTCCAATTT | + |
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Preference number: 5 (lower is better) Translates to: QNDTSLPHSQQASPCQYVCSKTS*MHFFQF Trigger: AAATTGGAAGAAATGCATCAAAGATGTCTTGCTGCA...AACGTATTGACATGGAGAAGCCTGCTGAGAATGGGGAAGGCTTGTGTCATTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CAA 90 bp | ATTCTCAGCAGGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTGCCTTTGAAGTCTGTTaGCTTTTTCTTGATGTTCCA | + |
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Preference number: 5 (lower is better) Translates to: ILSRLLHVNTFGTTAFPTAFEVC*LFLDVP Trigger: TGGAACATCAAGAAAAAGCAAACAGACTTCAAAGGC...AGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCCTGCTGAGAAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CAA 90 bp | GATCAATTTGACCTTGCTTTTCATCACAGTCCATTTGAAGGGTTGAGAGTTCTTGGGAAGGGCTTCCAATaGCTTTTCAACAGCATCTTT | + |
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Preference number: 5 (lower is better) Translates to: DQFDLAFHHSPFEGLRVLGKGFQ*LFNSIF Trigger: AAAGATGCTGTTGAAAAGCAATTGGAAGCCCTTCCC...AAGAACTCTCAACCCTTCAAATGGACTGTGATGAAAAGCAAGGTCAAATTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | GATCAATTTGACCTTGCTTTTCATCACAGTCCATTTGAAGGGTTGAGAGTTCTTGAGTTTCTGTACACTTaGCAACTCCTGAGAAGCAGT | + |
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Preference number: 5 (lower is better) Translates to: DQFDLAFHHSPFEGLRVLEFLYT*QLLRSS Trigger: ACTGCTTCTCAGGAGTTGCAAAGTGTACAGAAACTC...AAGAACTCTCAACCCTTCAAATGGACTGTGATGAAAAGCAAGGTCAAATTGATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | GGCTTCTCCATGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTAGTCCATTTGAAGGGTaGAGAGTTCTTCCTTTAATT | + |
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Preference number: 5 (lower is better) Translates to: GFSMSIRLVQQLSQLYSSSPFEG*RVLPLI Trigger: AATTAAAGGAAGAACTCTCAACCCTTCAAATGGACT...AGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACATGGAGAAGCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026866.15 |
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| CDS-3UTR CAA 90 bp | TGTCAATACGTTTGGTACAACAGCTTTCCCAACTCTACAGTTCTGTCAGTGAACAACTTTGCTCATTTATaGAGTCTACTAGTGTGTCAC | + |
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Preference number: 5 (lower is better) Translates to: CQYVWYNSFPNSTVLSVNNFAHL*SLLVCH Trigger: GTGACACACTAGTAGACTCAATAAATGAGCAAAGTT...GTTCACTGACAGAACTGTAGAGTTGGGAAAGCTGTTGTACCAAACGTATTGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS-3UTR CAA 90 bp | ATATTTTCCAGATTCATCATGGAAGCTGCTTTTCTTCTCTGCACTGTAATCACACATCGGCTTCTTCAATaGCTACACACAATCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: IFSRFIMEAAFLLCTVITHRLLQ*LHTILT Trigger: AGTCAAGATTGTGTGTAGCAATTGAAGAAGCCGATG...TGTGATTACAGTGCAGAGAAGAAAAGCAGCTTCCATGATGAATCTGGAAAATAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148769.8 |
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| CDS TCA 90 bp | GACATGCTGTTCTGCATAGTTGGGTCTCTGAAAATATGTTCGATTTaGTGCTGCCTAAGAATATCATTTAGTTTATCTTTTTGGTCTCTC | + |
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Preference number: 5 (lower is better) Translates to: DMLFCIVGSLKICSI*CCLRISFSLSFWSL Trigger: GAGAGACCAAAAAGATAAACTAAATGATATTCTTAGGCAGCATCAAATCGAACATATTTTCAGAGACCCAACTATGCAGAACAGCATGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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| CDS GCA 72 bp | TTCTCATACTCAGCAATGAGAGGAGGTAAAGAACTTTaGTCATTTATTGAGTCTACTAGTGTGTCACCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FSYSAMRGGKEL*SFIESTSVSPL Trigger: CAGAGGTGACACACTAGTAGACTCAATAAATGAGCAAAGTTCTTTACCTCCTCTCATTGCTGAGTATGAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026866.15 ENSMUST00000148769.8 |
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