Pregenerated sensors for SCIN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002565Ensembl transcript IDs: ENSMUST00000002640.6, ENSMUST00000078481.14
Found 174 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTGCTTAGAAGCACTGTaGCTCTCCTTCCTCTCTATG | + |
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Preference number: 2 (lower is better) Translates to: SEWHPSGIDLRWETARHCCLEAL*LSFLSM Trigger: CATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR-3UTR GCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTCCCAGATTGCAAAATTaGTCGAAAACAAATGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: SEWHPSGIDLRWETARHCPRLQN*SKTNGC Trigger: GCAACCATTTGTTTTCGAGCAATTTTGCAATCTGGG...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCCCAGATTGCAAAATTaGTCGAAAACAAATGGTTGC | + |
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Preference number: 2 (lower is better) Translates to: MLRSTVALLPLYGKRQVWPRLQN*SKTNGC Trigger: GCAACCATTTGTTTTCGAGCAATTTTGCAATCTGGG...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATCTCCTTCCTCTCTATaGGAAAAGACAAGTTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: KQQGIVKAIHKVKLTANRSPSSL*EKTSLA Trigger: AGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR TCA 72 bp | CACTTGGGAGTGAATGGCATCCAAGTGGCATTGACTTaGGATGGGAAACAGCAAGGCATTGTTAAAGCCATA | + |
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Preference number: 3 (lower is better) Translates to: HLGVNGIQVALT*DGKQQGIVKAI Trigger: TATGGCTTTAACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACTCCCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR CCA 72 bp | AGAAGTTCATCCTATGTAAGGACACTTGGGAGTGAATaGCATCCAAGTGGCATTGACTTGAGATGGGAAACA | + |
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Preference number: 3 (lower is better) Translates to: RSSSYVRTLGSE*HPSGIDLRWET Trigger: TGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACTCCCAAGTGTCCTTACATAGGATGAACTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| 3UTR-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTATACAGCAATTCCCTTaGAAAGAGAAGGAAAAGAGG | + |
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Preference number: 3 (lower is better) Translates to: KCLEALWLSFLSMGKDKFIQQFP*KEKEKR Trigger: CCTCTTTTCCTTCTCTTTCAAAGGGAATTGCTGTAT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTGCAGCCCAGCCTGCTaGCCTGCGCGCGCGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWCSPAC*PARANS Trigger: CGAGTTCGCGCGCGCAGGCCAGCAGGCTGGGCTGCA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTCGACCCTCCACACCTaGAGCCCAGCCTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWSTLHT*SPACWP Trigger: AGGCCAGCAGGCTGGGCTGCAGGTGTGGAGGGTCGA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTGCAGCCCAGCCTGCTaGCCTGCGCGCGCGAACTCG | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFCSPAC*PARANS Trigger: CGAGTTCGCGCGCGCAGGCCAGCAGGCTGGGCTGCA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCGGACCTGCACAGCCTaGCCTCCAAGGGACCGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFRTCTA*PPRDRS Trigger: GGACCGGTCCCTTGGAGGGCAGGCTGTGCAGGTCCG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAAGCCCCTGCTGGACTTaGTGGTGTGCAGCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLASPCWT*WCAAPG Trigger: ACCTGGTGCTGCACACCACCAAGTCCAGCAGGGGCT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTCGACCCTCCACACCTaGAGCCCAGCCTGCTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFSTLHT*SPACWP Trigger: AGGCCAGCAGGCTGGGCTGCAGGTGTGGAGGGTCGA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGGGGGGAGCCGGTGCCTaGCCTTCTTTCTTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWGGAGA*PSFLDV Trigger: GACATCCAAGAAAGAAGGGCAGGCACCGGCTCCCCC...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAAGGTTCCTCCGGACTTaGAAAAGGCGTGTAGGGGGA | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLARFLRT*KRRVGG Trigger: TCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACCAGGTCATCCTGGGTaGACTCTCCCGGAACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAPGHPG*TLPELL Trigger: AAGAAGTTCCGGGAGAGTTCACCCAGGATGACCTGG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGGGTAGGAGAAGCCCCTaGTGGACTTGGTGGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWGRRSP*WTWWCA Trigger: TGCACACCACCAAGTCCAGCAGGGGCTTCTCCTACC...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTCGTCCACCATGTTGTaGTGGGCTGCCATCTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWSSTML*WAAICG Trigger: TCCGCAGATGGCAGCCCAGCACAACATGGTGGACGA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTGTAGGGGGAGCCGGTaGCTGCCCTTCTTTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCCRGSR*LPFFLG Trigger: TCCAAGAAAGAAGGGCAGGCACCGGCTCCCCCTACA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTAGGAGAAGCCCCTGCTaGACTTGGTGGTGTGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCRRSPC*TWWCAA Trigger: TGCTGCACACCACCAAGTCCAGCAGGGGCTTCTCCT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATCTGCCAGGTCATCCTaGGTGAACTCTCCCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLASARSS*VNSPGT Trigger: AGTTCCGGGAGAGTTCACCCAGGATGACCTGGCAGA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGAGATGGCAGCCGCTGTaGTCTCATCCTGGGAACACT | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWRWQPL*SHPGNT Trigger: AGTGTTCCCAGGATGAGAGCACAGCGGCTGCCATCT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGGGGAGCCGGTGCCTaGCCTTCTTTCTTGGATGTC | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFGGAGA*PSFLDV Trigger: GACATCCAAGAAAGAAGGGCAGGCACCGGCTCCCCC...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTAGCCCCTGCTGGACTTaGTGGTGTGCAGCACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFSPCWT*WCAAPG Trigger: ACCTGGTGCTGCACACCACCAAGTCCAGCAGGGGCT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTGTCCCGGATGCCAATaGCCACCTGGCTTGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWCPGCQ*PPGLLS Trigger: TGAAAGCAAGCCAGGTGGCCATTGGCATCCGGGACA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTCCACCATGTTGTGCTaGGCTGCCATCTGCGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCSTMLC*AAICGE Trigger: TTCTCCGCAGATGGCAGCCCAGCACAACATGGTGGA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTCTGCCAGGTCATCCTaGGTGAACTCTCCCGGAACT | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCSARSS*VNSPGT Trigger: AGTTCCGGGAGAGTTCACCCAGGATGACCTGGCAGA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGCAGGCTCTTTGCCTTaGGAGACACGGACCTGCACA | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFAGSLP*ETRTCT Trigger: TGTGCAGGTCCGTGTCTCTCAAGGCAAAGAGCCTGC...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTGCTCTGGACTGGCTTaGCACCCAAATAGTCGTCCA | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWCSGLA*HPNSRP Trigger: TGGACGACTATTTGGGTGGCAAGCCAGTCCAGAGCA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTGCTGGGCTGCCATCTaGGGAGAACTGTGCAGTTTT | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWCWAAI*GELCSF Trigger: AAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTCGTCCACCATGTTGTaGTGGGCTGCCATCTGCGGA | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFSSTML*WAAICG Trigger: TCCGCAGATGGCAGCCCAGCACAACATGGTGGACGA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAATCATTGTCCCCATCTaGAAGCTCAGGCTTTCTCCC | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAIIVPI*KLRLSP Trigger: GGGAGAAAGCCTGAGCTTCCAGATGGGGACAATGAT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTCGCCATAGGAGCTTaGGTCAATCTGGACTCTACC | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWLAIGA*VNLDST Trigger: GGTAGAGTCCAGATTGACCCAAGCTCCTATGGCGAG...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACAGTCAGATCATTGGTaGGGACATGGTTTAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAQSDHW*GHGLVQ Trigger: CTGGACTAAACCATGTCCTCACCAATGATCTGACTG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCCAGGTCATCCTGGGTaGACTCTCCCGGAACTTCTT | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFPGHPG*TLPELL Trigger: AAGAAGTTCCGGGAGAGTTCACCCAGGATGACCTGG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCATGTTGTGCTGGGCTaGCATCTGCGGAGAACTGTG | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFHVVLG*HLRRTV Trigger: CACAGTTCTCCGCAGATGGCAGCCCAGCACAACATG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAAATTCTGGTGATAGATaGCAGGTTCCTCCGGACTTG | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLANSGDR*QVPPDL Trigger: CAAGTCCGGAGGAACCTGGCATCTATCACCAGAATT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACATGACATCATCTTCTaGCAGGTCATCCTGGGTGAA | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAHDIIF*QVILGE Trigger: TTCACCCAGGATGACCTGGCAGAAGATGATGTCATG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTGTCCCGGATGCCAATaGCCACCTGGCTTGCTTTCA | + |
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Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFCPGCQ*PPGLLS Trigger: TGAAAGCAAGCCAGGTGGCCATTGGCATCCGGGACA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCAGTCAGATCATTGGTaGGGACATGGTTTAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWQSDHW*GHGLVQ Trigger: CTGGACTAAACCATGTCCTCACCAATGATCTGACTG...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTCTTGCCATGTGTAGATaGTCTGTCCTCTGGGATAAG | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCLAMCR*SVLWDK Trigger: CTTATCCCAGAGGACAGATCATCTACACATGGCAAG...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR TCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAGGTTCCTTGCCTTCTTaGATTCTTGAAGCTTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAGSLPS*ILEALH Trigger: GTGCAAAGCTTCAAGAATTCAAGAAGGCAAGGAACC...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
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| CDS-3UTR TCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTACGCATCAAGTAGCATaGCATCATCTTCTGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCTHQVA*HHLLPG Trigger: ACCTGGCAGAAGATGATGTCATGCTACTTGATGCGT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGGACGCTCATATTTGTTaGAGGAGGAACCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWDAHIC*RRNHTT Trigger: AGTGGTGTGGTTCCTCCTGCAACAAATATGAGCGTC...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTGCTGGGCTGCCATCTaGGGAGAACTGTGCAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFCWAAI*GELCSF Trigger: AAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCTCTCTGCTCTGGACTaGCTTGCCACCCAAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFLSALD*LATQIV Trigger: GACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAGAACTGTTTGAAAATTaGTGTTTCACCGCCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAELFEN*CFTAFR Trigger: CCGGAAGGCGGTGAAACACCAATTTTCAAACAGTTC...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTGAGCTTGGGTCAATCTaGACTCTACCACTGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCELGSI*TLPLFS Trigger: AGAGAACAGTGGTAGAGTCCAGATTGACCCAAGCTC...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCTCGCCATAGGAGCTTaGGTCAATCTGGACTCTACC | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFLAIGA*VNLDST Trigger: GGTAGAGTCCAGATTGACCCAAGCTCCTATGGCGAG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTACTTCAGACCGCCTTTaGAATAGCCCACAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCTSDRL*NSPQNQ Trigger: CTGATTTTGTGGGCTATTTCAAAGGCGGTCTGAAGT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTCCCTAAAACCTTCATaGGCTCTGATGGTTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWSLKPS*ALMVHF Trigger: GAAGTGAACCATCAGAGCTCATGAAGGTTTTAGGGA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTTGAAGCTTTGCACTTaGGGACATCAGCCACATACT | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWLKLCT*GHQPHT Trigger: AGTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR TCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGGCCTTCTTGAATTCTTaGAGCTTTGCACTTGAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWAFLNS*SFALED Trigger: GTCCTCAAGTGCAAAGCTTCAAGAATTCAAGAAGGC...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAGGTAGGAGAAGCCCCTaGTGGACTTGGTGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRGRRSP*WTWWCA Trigger: TGCACACCACCAAGTCCAGCAGGGGCTTCTCCTACC...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGATCTGCGGAGAACTGTaGAGTTTTGAGGCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWICGEL*SFEASN Trigger: GTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGAT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTATCTGCGGAGAACTGTaGAGTTTTGAGGCATCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCICGEL*SFEASN Trigger: GTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGAT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATGTAGGGGGAGCCGGTaGCTGCCCTTCTTTCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRCRGSR*LPFFLG Trigger: TCCAAGAAAGAAGGGCAGGCACCGGCTCCCCCTACA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTATCAGCCACATACTCTaGTCCTTTCTCCTCCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFISHIL*SFLLLL Trigger: CAGGAGGAGGAGAAAGGAGCAGAGTATGTGGCTGAT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACCAGTGTTACTTTCATaGACCCACTTGCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAPVLLS*THLHLK Trigger: TTTCAGATGCAAGTGGGTCCATGAAAGTAACACTGG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATCTCCAGGTACATTTTaGCAGACTTCACTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLASPGTF*QTSLIP Trigger: AGGAATCAGTGAAGTCTGCCAAAATGTACCTGGAGA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAGAACTTCAGTGGCTCTaGCCACTCTCCGACCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRELQWL*PLSDPS Trigger: TGAAGGGTCGGAGAGTGGTCAGAGCCACTGAAGTTC...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCTTGCCATGTGTAGATaGTCTGTCCTCTGGGATAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFLAMCR*SVLWDK Trigger: CTTATCCCAGAGGACAGATCATCTACACATGGCAAG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAAGGTTCCTCCGGACTTaGAAAAGGCGTGTAGGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRRFLRT*KRRVGG Trigger: TCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATTTGGCAGACTTCACTaGTTCCTTTTTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLAFGRLH*FLFLNF Trigger: GAAGTTGAGAAAAAGGAATCAGTGAAGTCTGCCAAA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAAGCCTTGAAGCTCTCTaGTCTGGACTGGCTTGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRSLEAL*SGLACH Trigger: GTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGACGCTCATATTTGTTaGAGGAGGAACCACACCACT | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFDAHIC*RRNHTT Trigger: AGTGGTGTGGTTCCTCCTGCAACAAATATGAGCGTC...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCATGACATCATCTTCTaGCAGGTCATCCTGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFHDIIF*QVILGE Trigger: TTCACCCAGGATGACCTGGCAGAAGATGATGTCATG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTCCAGTGTTACTTTCATaGACCCACTTGCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCPVLLS*THLHLK Trigger: TTTCAGATGCAAGTGGGTCCATGAAAGTAACACTGG...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGAAAGCAACATTCCCATaGAGAACGGGTTTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWKATFP*RTGFLQ Trigger: CTGAAGAAAACCCGTTCTCCATGGGAATGTTGCTTT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATGTTTTGCAGCACCATaGTCCAAAATGAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLACFAAP*SKMKHS Trigger: AGAATGCTTCATTTTGGACCATGGTGCTGCAAAACA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAAGTCTTCCTCTCCTGTaGGTTAGCATTTTTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RSTVALLPLYGKRQVWLASLPLL*VSIFTF Trigger: AAAGGTAAAAATGCTAACCCACAGGAGAGGAAGACT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTGTTCCAGAATTCCTCTaGTTCCTTGCCTTCTTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCVPEFL*FLAFLN Trigger: ATTCAAGAAGGCAAGGAACCAGAGGAATTCTGGAAC...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGATCTTCCAGTTTTGTTaGAGCAACCATAAAGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWIFQFC*SNHKAE Trigger: CTCGGCTTTATGGTTGCTCCAACAAAACTGGAAGAT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTCTCCAGGTACATTTTaGCAGACTTCACTGATTCCT | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWSPGTF*QTSLIP Trigger: AGGAATCAGTGAAGTCTGCCAAAATGTACCTGGAGA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTACTTCAGACCGCCTTTaGAATAGCCCACAAAATCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFTSDRL*NSPQNQ Trigger: CTGATTTTGTGGGCTATTTCAAAGGCGGTCTGAAGT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTAACCTTCATGAGCTCTaGTGGTTCACTTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFNLHEL*WFTSFF Trigger: GAAGAAGGAAGTGAACCATCAGAGCTCATGAAGGTT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTTTGGCAGACTTCACTaGTTCCTTTTTCTCAACTTC | + |
|
Preference number: 4 (lower is better) Translates to: SEWHPSGIDLRWETARHCFGRLH*FLFLNF Trigger: GAAGTTGAGAAAAAGGAATCAGTGAAGTCTGCCAAA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATGCTCTGGACTGGCTTaGCACCCAAATAGTCGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRCSGLA*HPNSRP Trigger: TGGACGACTATTTGGGTGGCAAGCCAGTCCAGAGCA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGACTCTCTGCTCTGGACTaGCTTGCCACCCAAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRLSALD*LATQIV Trigger: GACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAG...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGTGTTTTGCAGCACCATaGTCCAAAATGAAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: MLRSTVALLPLYGKRQVWCFAAP*SKMKHS Trigger: AGAATGCTTCATTTTGGACCATGGTGCTGCAAAACA...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAACCATAAAGCCGAGGTaGATGGTCTTCAGCCCGAGT | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRTIKPR*MVFSPS Trigger: ACTCGGGCTGAAGACCATCCACCTCGGCTTTATGGT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAATCATTGTCCCCATCTaGAAGCTCAGGCTTTCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRIIVPI*KLRLSP Trigger: GGGAGAAAGCCTGAGCTTCCAGATGGGGACAATGAT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTAAAGCAACATTCCCATaGAGAACGGGTTTTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFKATFP*RTGFLQ Trigger: CTGAAGAAAACCCGTTCTCCATGGGAATGTTGCTTT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAAATTCTGGTGATAGATaGCAGGTTCCTCCGGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRNSGDR*QVPPDL Trigger: CAAGTCCGGAGGAACCTGGCATCTATCACCAGAATT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTATTCCTCTGGTTCCTTaGCTTCTTGAATTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFIPLVP*LLEFLK Trigger: CTTCAAGAATTCAAGAAGGCAAGGAACCAGAGGAAT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CCA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTAGTCTTCCTCTCCTGTaGGTTAGCATTTTTACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KCLEALWLSFLSMGKDKFSLPLL*VSIFTF Trigger: AAAGGTAAAAATGCTAACCCACAGGAGAGGAAGACT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATCCACCACAATGAGTTaGGATCTTCCTTTCCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRSTTMS*DLPFLS Trigger: TGAGAGGAAAGGAAGATCTCAACTCATTGTGGTGGA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAAACCTTCATGAGCTCTaGTGGTTCACTTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRNLHEL*WFTSFF Trigger: GAAGAAGGAAGTGAACCATCAGAGCTCATGAAGGTT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR TCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATCCCTAAAACCTTCATaGGCTCTGATGGTTCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRSLKPS*ALMVHF Trigger: GAAGTGAACCATCAGAGCTCATGAAGGTTTTAGGGA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAGAACTGTTTGAAAATTaGTGTTTCACCGCCTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRELFEN*CFTAFR Trigger: CCGGAAGGCGGTGAAACACCAATTTTCAAACAGTTC...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR GCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAATCTCTGGTAGCATTTaGTCCTTGCCATGTGTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRISGSI*SLPCVD Trigger: ATCTACACATGGCAAGGAGCAAATGCTACCAGAGAT...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGACCTGCCCTTCTTTCTTaGATGTCCCATTCTTATAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRPALLS*MSHSYK Trigger: TTTATAAGAATGGGACATCCAAGAAAGAAGGGCAGG...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CCA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATTTTCTCAACTTCATTaGCATCTTTGCCAATCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: KQQGIVKAIHKVKLTANRFSQLH*HLCQSK Trigger: TTTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 90 bp | AACACTCCTTTCCCAGCCAGAAATGCAGGCGGTAGGAGAAGCCCCTaGTGGACTTGGTGGTGTGCAGCACCAGGTAGGCGTCTCCGACGT | + |
|
Preference number: 5 (lower is better) Translates to: NTPFPARNAGGRRSP*WTWWCAAPGRRLRR Trigger: ACGTCGGAGACGCCTACCTGGTGCTGCACACCACCAAGTCCAGCAGGGGCTTCTCCTACCGCCTGCATTTCTGGCTGGGAAAGGAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 90 bp | TCAACCTCCACAATTCTGGTGATAGATGCCAGGTTCCTCCGGACTTaGAAAAGGCGTGTAGGGGGAGCCGGTGCCTGCCCTTCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: STSTILVIDARFLRT*KRRVGGAGACPSFL Trigger: CAAGAAAGAAGGGCAGGCACCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGGTTGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAAAGCCCCTGCTGGACTaGGTGGTGTGCAGCACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLAKPLLD*VVCSTR Trigger: CCTGGTGCTGCACACCACCAAGTCCAGCAGGGGCTT...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 90 bp | TCAATCTCCACAATTCTGGTGATAGATGCCAGGTTCCTCCGGACTTaGAAAAGGCGTGTAGGGGGAGCCGGTGCCTGCCCTTCTTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SISTILVIDARFLRT*KRRVGGAGACPSFL Trigger: CAAGAAAGAAGGGCAGGCACCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGATTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000078481.14 |
||
| CDS GCA 90 bp | GAACTCTCCCGGAACTTCTTCAATCTCCACAATTCTGGTGATAGATaGCAGGTTCCTCCGGACTTGAAAAAGGCGTGTAGGGGGAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: ELSRNFFNLHNSGDR*QVPPDLKKACRGSR Trigger: CCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGATTGAAGAAGTTCCGGGAGAGTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078481.14 |
||
| CDS GCA 90 bp | CTGAGGGGAACTTCAGTGGCTCTGACCACTCTCCGACCCTTCACGTaGAGAAGTCTTTTCGCAGTCAGATCATTGGTGAGGACATGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LRGTSVALTTLRPFT*RSLFAVRSLVRTWF Trigger: AAACCATGTCCTCACCAATGATCTGACTGCGAAAAGACTTCTGCACGTGAAGGGTCGGAGAGTGGTCAGAGCCACTGAAGTTCCCCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCCATCGTCCACCATGTaGTGCTGGGCTGCCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MLRSTVALLPLYGKRQVWPSSTM*CWAAIC Trigger: GCAGATGGCAGCCCAGCACAACATGGTGGACGATGG...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 90 bp | CACCATGTTGTGCTGGGCTGCCATCTGCGGAGAACTGTGCAGTTTTaGGGCATCAAACGGAATCTGCTTTATCTGAGCCACTTTCTCCGT | + |
|
Preference number: 5 (lower is better) Translates to: HHVVLGCHLRRTVQF*GIKRNLLYLSHFLR Trigger: ACGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCACAACATGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CCA 90 bp | CACAAAATCAGTCGACTCATAGCCTTGAAGCTCTCTGCTCTGGACTaGCTTGCCACCCAAATAGTCGTCCATCTGGACCGTAAAGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: HKISRLIALKLSALD*LATQIVVHLDRKDG Trigger: GCCATCTTTACGGTCCAGATGGACGACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCTATGAGTCGACTGATTTTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS CCA 90 bp | GAGGATAATGTAGCAGTCACCGCCATAGAACTCGCCATAGGAGCTTaGGTCAATCTGGACTCTACCACTGTTCTCTACACGCCAGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: EDNVAVTAIELAIGA*VNLDSTTVLYTPDL Trigger: GAGATCTGGCGTGTAGAGAACAGTGGTAGAGTCCAGATTGACCCAAGCTCCTATGGCGAGTTCTATGGCGGTGACTGCTACATTATCCTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTAAGCAGTCGCCCTTGTaGAAGCTCTCCCAGCTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCKQSPL*KLSQLR Trigger: CCTCAGCTGGGAGAGCTTCAACAAGGGCGACTGCTT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CAA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGAGCAGGCTCTTTGCCTaGAGAGACACGGACCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: MLRSTVALLPLYGKRQVWSRLFA*RDTDLH Trigger: GTGCAGGTCCGTGTCTCTCAAGGCAAAGAGCCTGCT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTAGCAGGCTCTTTGCCTaGAGAGACACGGACCTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCSRLFA*RDTDLH Trigger: GTGCAGGTCCGTGTCTCTCAAGGCAAAGAGCCTGCT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTCAGGTTCCTCCGGACTaGAAAAAGGCGTGTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCQVPPD*KKACRG Trigger: CCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTG...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS CCA 90 bp | TCCCACGCATCAAGTAGCATGACATCATCTTCTGCCAGGTCATCCTaGGTGAACTCTCCCGGAACTTCTTCAATCTCCACAATTCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SHASSSMTSSSARSS*VNSPGTSSISTILV Trigger: CACCAGAATTGTGGAGATTGAAGAAGTTCCGGGAGAGTTCACCCAGGATGACCTGGCAGAAGATGATGTCATGCTACTTGATGCGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000078481.14 |
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| CDS-3UTR CAA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTTCCTTTCCTCTCATaGTCCCGGATGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: MLRSTVALLPLYGKRQVWLPFLS*SRMPMA Trigger: GGCCATTGGCATCCGGGACAATGAGAGGAAAGGAAG...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS TCA 90 bp | TTAGTCCAGAAGCCACACCTCCAGCCTTGTACTTCAGACCGCCTTTaGAATAGCCCACAAAATCAGTCGACTCATAGCCTTGAAGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: LVQKPHLQPCTSDRL*NSPQNQSTHSLEAL Trigger: GAGAGCTTCAAGGCTATGAGTCGACTGATTTTGTGGGCTATTTCAAAGGCGGTCTGAAGTACAAGGCTGGAGGTGTGGCTTCTGGACTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS TCA 90 bp | TTCATGAGCTCTGATGGTTCACTTCCTTCTTCCACCACAATGAGTTaGGATCTTCCTTTCCTCTCATTGTCCCGGATGCCAATGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: FMSSDGSLPSSTTMS*DLPFLSLSRMPMAT Trigger: GGTGGCCATTGGCATCCGGGACAATGAGAGGAAAGGAAGATCTCAACTCATTGTGGTGGAAGAAGGAAGTGAACCATCAGAGCTCATGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS TCA 90 bp | ATTCCTCTGGTTCCTTGCCTTCTTGAATTCTTGAAGCTTTGCACTTaGGGACATCAGCCACATACTCTGCTCCTTTCTCCTCCTCCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: IPLVPCLLEFLKLCT*GHQPHTLLLSPPPG Trigger: GCCAGGAGGAGGAGAAAGGAGCAGAGTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAAGAATTCAAGAAGGCAAGGAACCAGAGGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
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| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCAGGTTCCTCCGGACTaGAAAAAGGCGTGTAGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFQVPPD*KKACRG Trigger: CCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS TCA 90 bp | GGAGAACTGTGCAGTTTTGAGGCATCAAACGGAATCTGCTTTATCTaGGCCACTTTCTCCGTGATGTACACCTTCCCAAAGCCATCACTC | + |
|
Preference number: 5 (lower is better) Translates to: GELCSFEASNGICFI*ATFSVMYTFPKPSL Trigger: GAGTGATGGCTTTGGGAAGGTGTACATCACGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS GCA 90 bp | GACAGTCAGAAACGCGGACATGGTCAGTTCATCTCTGGTAGCATTTaGTCCTTGCCATGTGTAGATGATCTGTCCTCTGGGATAAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DSQKRGHGQFISGSI*SLPCVDDLSSGISV Trigger: TACACTTATCCCAGAGGACAGATCATCTACACATGGCAAGGAGCAAATGCTACCAGAGATGAACTGACCATGTCCGCGTTTCTGACTGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
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| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTAGACGCTCATATTTGTaGCAGGAGGAACCACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCRRSYL*QEEPHH Trigger: GTGGTGTGGTTCCTCCTGCAACAAATATGAGCGTCT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATTCAGACGCTCATATTaGTTGCAGGAGGAACCACAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLAFRRSY*LQEEPH Trigger: GTGTGGTTCCTCCTGCAACAAATATGAGCGTCTGAA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCTTCCTTTCCTCTCATaGTCCCGGATGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFLPFLS*SRMPMA Trigger: GGCCATTGGCATCCGGGACAATGAGAGGAAAGGAAG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTACGACATCGTCATCATaGTCCCCATCTGGAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCTTSSS*SPSGSS Trigger: TGAGCTTCCAGATGGGGACAATGATGACGATGTCGT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | ATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGACGACATCGTCATCATaGTCCCCATCTGGAAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MLRSTVALLPLYGKRQVWTTSSS*SPSGSS Trigger: TGAGCTTCCAGATGGGGACAATGATGACGATGTCGT...CCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACTTGAAGCTTTGCACTaGAGGACATCAGCCACATAC | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLALEALH*RTSATY Trigger: GTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAAG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTACAATCGGTGTCCTCTaGTCTCTTCCAGAAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCTIGVL*SLPEGS Trigger: AGACCCTTCTGGAAGAGACAAGAGGACACCGATTGT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 90 bp | TTGAGGCATCAAACGGAATCTGCTTTATCTGAGCCACTTTCTCCGTaGTGTACACCTTCCCAAAGCCATCACTCTGGTCTTTATCCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRHQTESALSEPLSP*CTPSQSHHSGLYPS Trigger: GGAAGGATAAAGACCAGAGTGATGGCTTTGGGAAGGTGTACATCACGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 90 bp | CTCCCTCCAAGAGAGTTCCAGAATTCCTCTGGTTCCTTGCCTTCTTaGATTCTTGAAGCTTTGCACTTGAGGACATCAGCCACATACTCT | + |
|
Preference number: 5 (lower is better) Translates to: LPPREFQNSSGSLPS*ILEALHLRTSATYS Trigger: AGAGTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAAGAATTCAAGAAGGCAAGGAACCAGAGGAATTCTGGAACTCTCTTGGAGGGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS CCA 90 bp | TCCCACGCATCAAGTAGCATGACATCATCTTCTGCCAGGTCATCCTaGGTGAACTCTCCCGGAACTTCTTCAATAATGAATCTTCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: SHASSSMTSSSARSS*VNSPGTSSIMNLPV Trigger: AACTGGAAGATTCATTATTGAAGAAGTTCCGGGAGAGTTCACCCAGGATGACCTGGCAGAAGATGATGTCATGCTACTTGATGCGTGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCACTTTCATGGACCCACTaGCATCTGAAACCATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLALSWTH*HLKPCR Trigger: TCTACATGGTTTCAGATGCAAGTGGGTCCATGAAAG...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCAGAGAACTGTGCAGTTTaGAGGCATCAAACGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLAENCAV*RHQTES Trigger: AGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTC...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGACCATCGTCCACCATGTaGTGCTGGGCTGCCATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQQGIVKAIHKVKLTANRPSSTM*CWAAIC Trigger: GCAGATGGCAGCCCAGCACAACATGGTGGACGATGG...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTAGACGCTCATATTTGTaGCAGGAGGAACCACACCAC | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFRRSYL*QEEPHH Trigger: GTGGTGTGGTTCCTCCTGCAACAAATATGAGCGTCT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTTTCCACCACAATGAGTaGAGATCTTCCTTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCFHHNE*RSSFPL Trigger: GAGAGGAAAGGAAGATCTCAACTCATTGTGGTGGAA...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTACAATCGGTGTCCTCTaGTCTCTTCCAGAAGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFTIGVL*SLPEGS Trigger: AGACCCTTCTGGAAGAGACAAGAGGACACCGATTGT...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTCTTTCATGGACCCACTaGCATCTGAAACCATGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFLSWTH*HLKPCR Trigger: TCTACATGGTTTCAGATGCAAGTGGGTCCATGAAAG...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATTTCCATACAAAAATTaGTTTTGCAGCACCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLAFPYKN*FCSTMV Trigger: GACCATGGTGCTGCAAAACAAATTTTTGTATGGAAA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTGGCTAGCATTTTTCTCAACTTCATaGGCATCTTTGCCAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: RSTVALLPLYGKRQVWLAFFSTS*ASLPIQ Trigger: TTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAAA...TGCTAGCCAAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AGTGAATGGCATCCAAGTGGCATTGACTTGAGATGGGAAACAGCAAGGCATTGTACTTCATTGGCATCTTaGCCAATCCAAATAAAGATC | + |
|
Preference number: 5 (lower is better) Translates to: SEWHPSGIDLRWETARHCTSLAS*PIQIKI Trigger: GATCTTTATTTGGATTGGCAAAGATGCCAATGAAGT...ACAATGCCTTGCTGTTTCCCATCTCAAGTCAATGCCACTTGGATGCCATTCACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAGTCTCCAGGTACATTTaGGCAGACTTCACTGATTCC | + |
|
Preference number: 5 (lower is better) Translates to: KQQGIVKAIHKVKLTANRVSRYI*ADFTDS Trigger: GGAATCAGTGAAGTCTGCCAAAATGTACCTGGAGAC...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CCA 90 bp | ACTCTGGTCTTTATCCTTCCAGTCCTTAAAGAACTGTTTGAAAATTaGTGTTTCACCGCCTTCCGGAAGAACCTGAATTTGAGTATTAGT | + |
|
Preference number: 5 (lower is better) Translates to: TLVFILPVLKELFEN*CFTAFRKNLNLSIS Trigger: ACTAATACTCAAATTCAGGTTCTTCCGGAAGGCGGTGAAACACCAATTTTCAAACAGTTCTTTAAGGACTGGAAGGATAAAGACCAGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATTCCACCACAATGAGTaGAGATCTTCCTTTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KQQGIVKAIHKVKLTANRFHHNE*RSSFPL Trigger: GAGAGGAAAGGAAGATCTCAACTCATTGTGGTGGAA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAATGCTTAGAAGCACTGTGGCTCTCCTTCCTCTCTATGGGAAAAGACAAGTTTTTTCCATACAAAAATTaGTTTTGCAGCACCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: KCLEALWLSFLSMGKDKFFPYKN*FCSTMV Trigger: GACCATGGTGCTGCAAAACAAATTTTTGTATGGAAA...AAACTTGTCTTTTCCCATAGAGAGGAAGGAGAGCCACAGTGCTTCTAAGCATTT 40% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGAGAGAACTGTGCAGTTTaGAGGCATCAAACGGAATCT | + |
|
Preference number: 5 (lower is better) Translates to: KQQGIVKAIHKVKLTANRENCAV*RHQTES Trigger: AGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTC...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS-3UTR CAA 90 bp | AAACAGCAAGGCATTGTTAAAGCCATACATAAAGTAAAGCTCACTGCAAACAGATTTTTCTCAACTTCATaGGCATCTTTGCCAATCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KQQGIVKAIHKVKLTANRFFSTS*ASLPIQ Trigger: TTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAAA...TCTGTTTGCAGTGAGCTTTACTTTATGTATGGCTTTAACAATGCCTTGCTGTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | TTCCCAGCCAGAAATGCAGGCGGTAGGAGAAGCCCCTaGTGGACTTGGTGGTGTGCAGCACCAGGTAGGCGT | + |
|
Preference number: 6 (lower is better) Translates to: FPARNAGGRRSP*WTWWCAAPGRR Trigger: ACGCCTACCTGGTGCTGCACACCACCAAGTCCAGCAGGGGCTTCTCCTACCGCCTGCATTTCTGGCTGGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CCA 72 bp | ACCTGCACAGCCTGCCCTCCAAGGGACCGGTCCAACTaGACAGTCAGAAACGCGGACATGGTCAGTTCATCT | + |
|
Preference number: 6 (lower is better) Translates to: TCTACPPRDRSN*TVRNADMVSSS Trigger: AGATGAACTGACCATGTCCGCGTTTCTGACTGTCCAGTTGGACCGGTCCCTTGGAGGGCAGGCTGTGCAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | ACAATTCTGGTGATAGATGCCAGGTTCCTCCGGACTTaGAAAAGGCGTGTAGGGGGAGCCGGTGCCTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: TILVIDARFLRT*KRRVGGAGACP Trigger: AGGGCAGGCACCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | GAGCCATCGTCCACCATGTTGTGCTGGGCTGCCATCTaGGGAGAACTGTGCAGTTTTGAGGCATCAAACGGA | + |
|
Preference number: 6 (lower is better) Translates to: EPSSTMLCWAAI*GELCSFEASNG Trigger: TCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCACAACATGGTGGACGATGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TTTGAACAAACTCAGCAGGTGAGCAGGCTCTTTGCCTaGAGAGACACGGACCTGCACAGCCTGCCCTCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: FEQTQQVSRLFA*RDTDLHSLPSK Trigger: CTTGGAGGGCAGGCTGTGCAGGTCCGTGTCTCTCAAGGCAAAGAGCCTGCTCACCTGCTGAGTTTGTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | GTCAACCTCCACAATTCTGGTGATAGATGCCAGGTTCCTCCGGACTaGAAAAAGGCGTGTAGGGGGAGCCGGTGCCTGCCCTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: VNLHNSGDRCQVPPD*KKACRGSRCLPFFL Trigger: AAGAAAGAAGGGCAGGCACCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGGTTGAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS CCA 72 bp | AGTCGACTCATAGCCTTGAAGCTCTCTGCTCTGGACTaGCTTGCCACCCAAATAGTCGTCCATCTGGACCGT | + |
|
Preference number: 6 (lower is better) Translates to: SRLIALKLSALD*LATQIVVHLDR Trigger: ACGGTCCAGATGGACGACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCTATGAGTCGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | GTGCTGGGCTGCCATCTGCGGAGAACTGTGCAGTTTTaGGGCATCAAACGGAATCTGCTTTATCTGAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: VLGCHLRRTVQF*GIKRNLLYLSH Trigger: GTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | ACTTCAGTGGCTCTGACCACTCTCCGACCCTTCACGTaGAGAAGTCTTTTCGCAGTCAGATCATTGGTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSVALTTLRPFT*RSLFAVRSLVR Trigger: CCTCACCAATGATCTGACTGCGAAAAGACTTCTGCACGTGAAGGGTCGGAGAGTGGTCAGAGCCACTGAAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CCA 72 bp | GTAGCAGTCACCGCCATAGAACTCGCCATAGGAGCTTaGGTCAATCTGGACTCTACCACTGTTCTCTACACG | + |
|
Preference number: 6 (lower is better) Translates to: VAVTAIELAIGA*VNLDSTTVLYT Trigger: CGTGTAGAGAACAGTGGTAGAGTCCAGATTGACCCAAGCTCCTATGGCGAGTTCTATGGCGGTGACTGCTAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | ACTCTCCGACCCTTCACGTGCAGAAGTCTTTTCGCAGTCAGATCATaGGTGAGGACATGGTTTAGTCCAGAAGCCACACCTCCAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: TLRPFTCRSLFAVRS*VRTWFSPEATPPAL Trigger: CAAGGCTGGAGGTGTGGCTTCTGGACTAAACCATGTCCTCACCAATGATCTGACTGCGAAAAGACTTCTGCACGTGAAGGGTCGGAGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | CCACCATGTTGTGCTGGGCTGCCATCTGCGGAGAACTGTGCAGTTTaGAGGCATCAAACGGAATCTGCTTTATCTGAGCCACTTTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: PPCCAGLPSAENCAV*RHQTESALSEPLSP Trigger: CGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCACAACATGGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | TTCAATCTCCACAATTCTGGTGATAGATGCCAGGTTCCTCCGGACTaGAAAAAGGCGTGTAGGGGGAGCCGGTGCCTGCCCTTCTTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: FNLHNSGDRCQVPPD*KKACRGSRCLPFFL Trigger: AAGAAAGAAGGGCAGGCACCGGCTCCCCCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGATTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | CAGACCGCCTTTGAAATAGCCCACAAAATCAGTCGACTCATAGCCTaGAAGCTCTCTGCTCTGGACTGGCTTGCCACCCAAATAGTCGTC | + |
|
Preference number: 6 (lower is better) Translates to: QTAFEIAHKISRLIA*KLSALDWLATQIVV Trigger: GACGACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCTATGAGTCGACTGATTTTGTGGGCTATTTCAAAGGCGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | CCACAAAATCAGTCGACTCATAGCCTTGAAGCTCTCTaGTCTGGACTGGCTTGCCACCCAAATAGTCGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: PQNQSTHSLEAL*SGLACHPNSRP Trigger: TGGACGACTATTTGGGTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCTATGAGTCGACTGATTTTGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TGTGCTGGGCTGCCATCTGCGGAGAACTGTGCAGTTTaGAGGCATCAAACGGAATCTGCTTTATCTGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: CAGLPSAENCAV*RHQTESALSEP Trigger: TGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TGTAGCAGTCACCGCCATAGAACTCGCCATAGGAGCTaGGGTCAATCTGGACTCTACCACTGTTCTCTACAC | + |
|
Preference number: 6 (lower is better) Translates to: CSSHRHRTRHRS*GQSGLYHCSLH Trigger: GTGTAGAGAACAGTGGTAGAGTCCAGATTGACCCAAGCTCCTATGGCGAGTTCTATGGCGGTGACTGCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | TCACGTGCAGAAGTCTTTTCGCAGTCAGATCATTGGTaGGGACATGGTTTAGTCCAGAAGCCACACCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: SRAEVFSQSDHW*GHGLVQKPHLQ Trigger: CTGGAGGTGTGGCTTCTGGACTAAACCATGTCCTCACCAATGATCTGACTGCGAAAAGACTTCTGCACGTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | ACCATGTTGTGCTGGGCTGCCATCTGCGGAGAACTGTaGAGTTTTGAGGCATCAAACGGAATCTGCTTTATC | + |
|
Preference number: 6 (lower is better) Translates to: TMLCWAAICGEL*SFEASNGICFI Trigger: GATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCACAGTTCTCCGCAGATGGCAGCCCAGCACAACATGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS GCA 72 bp | TGCATCAACGTCAACCTCCACAATTCTGGTGATAGATaGCAGGTTCCTCCGGACTTGAAAAAGGCGTGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CINVNLHNSGDR*QVPPDLKKACR Trigger: CCTACACGCCTTTTTCAAGTCCGGAGGAACCTGGCATCTATCACCAGAATTGTGGAGGTTGACGTTGATGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS TCA 72 bp | AAGCCACACCTCCAGCCTTGTACTTCAGACCGCCTTTaGAATAGCCCACAAAATCAGTCGACTCATAGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KPHLQPCTSDRL*NSPQNQSTHSL Trigger: AAGGCTATGAGTCGACTGATTTTGTGGGCTATTTCAAAGGCGGTCTGAAGTACAAGGCTGGAGGTGTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TTTGAAATAGCCCACAAAATCAGTCGACTCATAGCCTaGAAGCTCTCTGCTCTGGACTGGCTTGCCACCCAA | + |
|
Preference number: 6 (lower is better) Translates to: FEIAHKISRLIA*KLSALDWLATQ Trigger: TTGGGTGGCAAGCCAGTCCAGAGCAGAGAGCTTCAAGGCTATGAGTCGACTGATTTTGTGGGCTATTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | TTCGCCATCTTCCTGTTACTTATGTCTGCTACGACATCGTCATCATaGTCCCCATCTGGAAGCTCAGGCTTTCTCCCTAAAACCTTCATG | + |
|
Preference number: 6 (lower is better) Translates to: FAIFLLLMSATTSSS*SPSGSSGFLPKTFM Trigger: CATGAAGGTTTTAGGGAGAAAGCCTGAGCTTCCAGATGGGGACAATGATGACGATGTCGTAGCAGACATAAGTAACAGGAAGATGGCGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | TCTGATGGTTCACTTCCTTCTTCCACCACAATGAGTTaGGATCTTCCTTTCCTCTCATTGTCCCGGATGCCA | + |
|
Preference number: 6 (lower is better) Translates to: SDGSLPSSTTMS*DLPFLSLSRMP Trigger: TGGCATCCGGGACAATGAGAGGAAAGGAAGATCTCAACTCATTGTGGTGGAAGAAGGAAGTGAACCATCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | CAAACGGAATCTGCTTTATCTGAGCCACTTTCTCCGTaGTGTACACCTTCCCAAAGCCATCACTCTGGTCTT | + |
|
Preference number: 6 (lower is better) Translates to: QTESALSEPLSP*CTPSQSHHSGL Trigger: AAGACCAGAGTGATGGCTTTGGGAAGGTGTACATCACGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TTTCTTCAGCCACCAGTGTTACTTTCATGGACCCACTaGCATCTGAAACCATGTAGAGCTTCGCCATCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: FLQPPVLLSWTH*HLKPCRASPSS Trigger: GGAAGATGGCGAAGCTCTACATGGTTTCAGATGCAAGTGGGTCCATGAAAGTAACACTGGTGGCTGAAGAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | TGCAGTTTTGAGGCATCAAACGGAATCTGCTTTATCTaGGCCACTTTCTCCGTGATGTACACCTTCCCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: CSFEASNGICFI*ATFSVMYTFPK Trigger: CTTTGGGAAGGTGTACATCACGGAGAAAGTGGCTCAGATAAAGCAGATTCCGTTTGATGCCTCAAAACTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS TCA 72 bp | GTTCCTTGCCTTCTTGAATTCTTGAAGCTTTGCACTTaGGGACATCAGCCACATACTCTGCTCCTTTCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: VPCLLEFLKLCT*GHQPHTLLLSP Trigger: AGGAGAAAGGAGCAGAGTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAAGAATTCAAGAAGGCAAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS TCA 72 bp | CCAGAATTCCTCTGGTTCCTTGCCTTCTTGAATTCTTaGAGCTTTGCACTTGAGGACATCAGCCACATACTC | + |
|
Preference number: 6 (lower is better) Translates to: PEFLWFLAFLNS*SFALEDISHIL Trigger: GAGTATGTGGCTGATGTCCTCAAGTGCAAAGCTTCAAGAATTCAAGAAGGCAAGGAACCAGAGGAATTCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002640.6 |
||
| CDS CAA 72 bp | TTCCTGTTACTTATGTCTGCTACGACATCGTCATCATaGTCCCCATCTGGAAGCTCAGGCTTTCTCCCTAAA | + |
|
Preference number: 6 (lower is better) Translates to: FLLLMSATTSSS*SPSGSSGFLPK Trigger: TTTAGGGAGAAAGCCTGAGCTTCCAGATGGGGACAATGATGACGATGTCGTAGCAGACATAAGTAACAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | TTGGCAGACTTCACTGATTCCTTTTTCTCAACTTCATTGGCATCTTaGCCAATCCAAATAAAGATCTGTTCCCACGCATCAAGTAGCATG | + |
|
Preference number: 6 (lower is better) Translates to: LADFTDSFFSTSLAS*PIQIKICSHASSSM Trigger: CATGCTACTTGATGCGTGGGAACAGATCTTTATTTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAAAGGAATCAGTGAAGTCTGCCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 90 bp | AGGTACATTTTGGCAGACTTCACTGATTCCTTTTTCTCAACTTCATaGGCATCTTTGCCAATCCAAATAAAGATCTGTTCCCACGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: RYILADFTDSFFSTS*ASLPIQIKICSHAS Trigger: TGATGCGTGGGAACAGATCTTTATTTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAAAGGAATCAGTGAAGTCTGCCAAAATGTACCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||
| CDS CAA 72 bp | TTCACTGATTCCTTTTTCTCAACTTCATTGGCATCTTaGCCAATCCAAATAAAGATCTGTTCCCACGCATCA | + |
|
Preference number: 6 (lower is better) Translates to: FTDSFFSTSLAS*PIQIKICSHAS Trigger: TGATGCGTGGGAACAGATCTTTATTTGGATTGGCAAAGATGCCAATGAAGTTGAGAAAAAGGAATCAGTGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000002640.6 ENSMUST00000078481.14 |
||