Pregenerated sensors for SCGB2B12 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000097982

Ensembl transcript IDs: ENSMUST00000183195.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR CCA 90 bp	ATCAGGAATCCAACTTCAGGAGAGAAAGAGGACAGGTCAGCAAGATaGCACTTGGATCAGACATGTTGCAAAGATGGGTGCCCAAAACAC	+
Preference number: 1 (lower is better) Translates to: IRNPTSGEKEDRSAR*HLDQTCCKDGCPKH Trigger: GTGTTTTGGGCACCCATCTTTGCAACATGTCTGATCCAAGTGCCATCTTGCTGACCTGTCCTCTTTCTCTCCTGAAGTTGGATTCCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183195.2
3UTR CCA 90 bp	ATCCAACTTCAGGAGAGAAAGAGGACAGGTCAGCAAGATGGCACTTaGATCAGACATGTTGCAAAGATGGGTGCCCAAAACACATTAACA	+
Preference number: 1 (lower is better) Translates to: IQLQERKRTGQQDGT*IRHVAKMGAQNTLT Trigger: TGTTAATGTGTTTTGGGCACCCATCTTTGCAACATGTCTGATCCAAGTGCCATCTTGCTGACCTGTCCTCTTTCTCTCCTGAAGTTGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183195.2
3UTR CCA 72 bp	CCAACTTCAGGAGAGAAAGAGGACAGGTCAGCAAGATaGCACTTGGATCAGACATGTTGCAAAGATGGGTGC	+
Preference number: 3 (lower is better) Translates to: PTSGEKEDRSAR*HLDQTCCKDGC Trigger: GCACCCATCTTTGCAACATGTCTGATCCAAGTGCCATCTTGCTGACCTGTCCTCTTTCTCTCCTGAAGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183195.2
CDS CAA 90 bp	AGAGAACACTTGCATAGACTTCGAAGAAAGGAACACATGCTTCTGTaGTCTGGAAGCTCAGCTCTCCAGTTATCAGCAAGCCCAGCAGAA	+
Preference number: 6 (lower is better) Translates to: REHLHRLRRKEHMLL*SGSSALQLSASPAE Trigger: TTCTGCTGGGCTTGCTGATAACTGGAGAGCTGAGCTTCCAGACAACAGAAGCATGTGTTCCTTTCTTCGAAGTCTATGCAAGTGTTCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183195.2
CDS CAA 72 bp	TTGCATAGACTTCGAAGAAAGGAACACATGCTTCTGTaGTCTGGAAGCTCAGCTCTCCAGTTATCAGCAAGC	+
Preference number: 6 (lower is better) Translates to: LHRLRRKEHMLL*SGSSALQLSAS Trigger: GCTTGCTGATAACTGGAGAGCTGAGCTTCCAGACAACAGAAGCATGTGTTCCTTTCTTCGAAGTCTATGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183195.2
CDS GCA 72 bp	GAGAACACTTGCATAGACTTCGAAGAAAGGAACACATaGTTCTGTTGTCTGGAAGCTCAGCTCTCCAGTTAT	+
Preference number: 6 (lower is better) Translates to: ENTCIDFEERNT*FCCLEAQLSSY Trigger: ATAACTGGAGAGCTGAGCTTCCAGACAACAGAAGCATGTGTTCCTTTCTTCGAAGTCTATGCAAGTGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183195.2

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