Pregenerated sensors for SCGB2B11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000099729Ensembl transcript IDs: ENSMUST00000188293.2
Found 2 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
---|---|---|
3UTR TCA 90 bp | CACAGAACAGAGTTGCAAGCTTTTAATAGATTTAGTCTAAGAGACTaGATGATGAAGGAACAGTATCAGGAATCCTACTTCAGGAGAGAA | + |
Preference number: 1 (lower is better) Translates to: HRTELQAFNRFSLRD*MMKEQYQESYFRRE Trigger: TTCTCTCCTGAAGTAGGATTCCTGATACTGTTCCTTCATCATTCAGTCTCTTAGACTAAATCTATTAAAAGCTTGCAACTCTGTTCTGTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188293.2 |
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3UTR TCA 72 bp | GAGTTGCAAGCTTTTAATAGATTTAGTCTAAGAGACTaGATGATGAAGGAACAGTATCAGGAATCCTACTTC | + |
Preference number: 3 (lower is better) Translates to: ELQAFNRFSLRD*MMKEQYQESYF Trigger: GAAGTAGGATTCCTGATACTGTTCCTTCATCATTCAGTCTCTTAGACTAAATCTATTAAAAGCTTGCAACTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000188293.2 |