Pregenerated sensors for SCGB1B30 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000078752

Ensembl transcript IDs: ENSMUST00000108083.2

Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS GCA 90 bp	CTTGTCTTCCTCGGCCAACATCCTATCGGAACATTTCTTGATATTTaGAGCATTTTCCAGTACGAGAGGGTCATTATTGTATTGTTTCAG	+
Preference number: 5 (lower is better) Translates to: LVFLGQHPIGTFLDI*SIFQYERVIIVLFQ Trigger: CTGAAACAATACAATAATGACCCTCTCGTACTGGAAAATGCTGCAAATATCAAGAAATGTTCCGATAGGATGTTGGCCGAGGAAGACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108083.2
CDS CAA 90 bp	GCCTGCGTCTTGTCTTCCTCGGCCAACATCCTATCGGAACATTTCTaGATATTTGCAGCATTTTCCAGTACGAGAGGGTCATTATTGTAT	+
Preference number: 6 (lower is better) Translates to: ACVLSSSANILSEHF*IFAAFSSTRGSLLY Trigger: ATACAATAATGACCCTCTCGTACTGGAAAATGCTGCAAATATCAAGAAATGTTCCGATAGGATGTTGGCCGAGGAAGACAAGACGCAGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108083.2
CDS TCA 72 bp	TGTCTTCCTCGGCCAACATCCTATCGGAACATTTCTTaGTATTTGCAGCATTTTCCAGTACGAGAGGGTCAT	+
Preference number: 6 (lower is better) Translates to: CLPRPTSYRNIS*YLQHFPVREGH Trigger: ATGACCCTCTCGTACTGGAAAATGCTGCAAATATCAAGAAATGTTCCGATAGGATGTTGGCCGAGGAAGACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108083.2
CDS CAA 72 bp	TTGTCTTCCTCGGCCAACATCCTATCGGAACATTTCTaGATATTTGCAGCATTTTCCAGTACGAGAGGGTCA	+
Preference number: 6 (lower is better) Translates to: LSSSANILSEHF*IFAAFSSTRGS Trigger: TGACCCTCTCGTACTGGAAAATGCTGCAAATATCAAGAAATGTTCCGATAGGATGTTGGCCGAGGAAGACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108083.2
CDS GCA 72 bp	CTCGGCCAACATCCTATCGGAACATTTCTTGATATTTaGAGCATTTTCCAGTACGAGAGGGTCATTATTGTA	+
Preference number: 6 (lower is better) Translates to: LGQHPIGTFLDI*SIFQYERVIIV Trigger: TACAATAATGACCCTCTCGTACTGGAAAATGCTGCAAATATCAAGAAATGTTCCGATAGGATGTTGGCCGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108083.2

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