Pregenerated sensors for SCGB1B24 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000078753Ensembl transcript IDs: ENSMUST00000108087.4
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 72 bp | TTTATAGCTGGGCAAATGCCACAATATACCCCTGAATaGAGGAGCAGGGCAGCCCTGAGCAGCAAGAGAGCA | + |
Preference number: 6 (lower is better) Translates to: FIAGQMPQYTPE*RSRAALSSKRA Trigger: TGCTCTCTTGCTGCTCAGGGCTGCCCTGCTCCTGCATTCAGGGGTATATTGTGGCATTTGCCCAGCTATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000108087.4 |
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CDS CAA 90 bp | GCATGTGTCTTGTCTTCGTCTGTCAATGTGCTATCGACACATTTCTaGATCTTTTCAGTATTTTCCAGTATTTCAGGATCGTCTTTGTAT | + |
Preference number: 6 (lower is better) Translates to: ACVLSSSVNVLSTHF*IFSVFSSISGSSLY Trigger: ATACAAAGACGATCCTGAAATACTGGAAAATACTGAAAAGATCAAGAAATGTGTCGATAGCACATTGACAGACGAAGACAAGACACATGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108087.4 |
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CDS CAA 72 bp | TTGTCTTCGTCTGTCAATGTGCTATCGACACATTTCTaGATCTTTTCAGTATTTTCCAGTATTTCAGGATCG | + |
Preference number: 6 (lower is better) Translates to: LSSSVNVLSTHF*IFSVFSSISGS Trigger: CGATCCTGAAATACTGGAAAATACTGAAAAGATCAAGAAATGTGTCGATAGCACATTGACAGACGAAGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000108087.4 |