Pregenerated sensors for SCGB1B11 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000101638

Ensembl transcript IDs: ENSMUST00000186031.2

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 90 bp	TGTTGGATTCCTGTTCTTAGACACCTGGAGAGAAGGACTGTAATCTaGTGCATCTATGCAGGTGAGCAGGCAAGTGGCTTCCTTGAGACC	+
Preference number: 1 (lower is better) Translates to: CWIPVLRHLERRTVI*CIYAGEQASGFLET Trigger: GGTCTCAAGGAAGCCACTTGCCTGCTCACCTGCATAGATGCAGCAGATTACAGTCCTTCTCTCCAGGTGTCTAAGAACAGGAATCCAACA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186031.2
CDS-3UTR CCA 90 bp	TATTGTTGGATTCCTGTTCTTAGACACCTGGAGAGAAGGACTGTAATCTGCTGCGTGCTATCGACACATTaGTTGATTTTTGCAGTATTT	+
Preference number: 4 (lower is better) Translates to: YCWIPVLRHLERRTVICCVLSTH*LIFAVF Trigger: AAATACTGCAAAAATCAACCAATGTGTCGATAGCAC...GCAGCAGATTACAGTCCTTCTCTCCAGGTGTCTAAGAACAGGAATCCAACAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000186031.2
CDS GCA 90 bp	CATATCTTTCTCTGTCAAAGTGCTATCGACACATTGGTTGATTTTTaGAGTATTTTCCAGTATTACAGGGTCATCTTTGTATTGTTTCAC	+
Preference number: 5 (lower is better) Translates to: HIFLCQSAIDTLVDF*SIFQYYRVIFVLFH Trigger: GTGAAACAATACAAAGATGACCCTGTAATACTGGAAAATACTGCAAAAATCAACCAATGTGTCGATAGCACTTTGACAGAGAAAGATATG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186031.2
CDS CAA 72 bp	ATTTTTGCAGTATTTTCCAGTATTACAGGGTCATCTTaGTATTGTTTCACGTACTCAACATACTCCTCTGAG	+
Preference number: 6 (lower is better) Translates to: IFAVFSSITGSS*YCFTYSTYSSE Trigger: CTCAGAGGAGTATGTTGAGTACGTGAAACAATACAAAGATGACCCTGTAATACTGGAAAATACTGCAAAAAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186031.2
CDS CAA 72 bp	ATATCTTTCTCTGTCAAAGTGCTATCGACACATTGGTaGATTTTTGCAGTATTTTCCAGTATTACAGGGTCA	+
Preference number: 6 (lower is better) Translates to: ISFSVKVLSTHW*IFAVFSSITGS Trigger: TGACCCTGTAATACTGGAAAATACTGCAAAAATCAACCAATGTGTCGATAGCACTTTGACAGAGAAAGATAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186031.2
CDS CAA 72 bp	TGTCATATCTTTCTCTGTCAAAGTGCTATCGACACATaGGTTGATTTTTGCAGTATTTTCCAGTATTACAGG	+
Preference number: 6 (lower is better) Translates to: CHIFLCQSAIDT*VDFCSIFQYYR Trigger: CCTGTAATACTGGAAAATACTGCAAAAATCAACCAATGTGTCGATAGCACTTTGACAGAGAAAGATATGACA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000186031.2

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