Pregenerated sensors for SCGB1B10 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000099581

Ensembl transcript IDs: ENSMUST00000187257.2

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
3UTR GCA 72 bp	CCTGTTCTTAGACACCTGAAGGGAAGGGCTATAGCCTaGTGCATCTATGCAGGTGAGCAGGCAAATGGCTTC	+
Preference number: 3 (lower is better) Translates to: PVLRHLKGRAIA*CIYAGEQANGF Trigger: GAAGCCATTTGCCTGCTCACCTGCATAGATGCAGCAGGCTATAGCCCTTCCCTTCAGGTGTCTAAGAACAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS-3UTR TCA 90 bp	CCTGCTGCATCTATGCAGGTGAGCAGGCAAATGGCTTCCTTGAGAGCAGAGTTGGCCACAATCTCCCCATaGAGAGAGGAGGAGCAGGGC	+
Preference number: 4 (lower is better) Translates to: PAASMQVSRQMASLRAELATISP*REEEQG Trigger: GCCCTGCTCCTCCTCTCTTCATGGGGAGATTGTGGC...CAACTCTGCTCTCAAGGAAGCCATTTGCCTGCTCACCTGCATAGATGCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS-3UTR GCA 90 bp	CCTGCTGCATCTATGCAGGTGAGCAGGCAAATGGCTTCCTTGAGAGCAGAGTTGTTCAATGAAACCATTTaGATGTGCCTTGTCTTCCTC	+
Preference number: 4 (lower is better) Translates to: PAASMQVSRQMASLRAELFNETI*MCLVFL Trigger: GAGGAAGACAAGGCACATGCAAATGGTTTCATTGAA...CAACTCTGCTCTCAAGGAAGCCATTTGCCTGCTCACCTGCATAGATGCAGCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS TCA 90 bp	ATGAACATCCTCTTTCATAGCTGGGCAAATGCCACAATCTCCCCATaGAGAGAGGAGGAGCAGGGCAACCCCAAAGATCACCACAGCACC	+
Preference number: 5 (lower is better) Translates to: MNILFHSWANATISP*REEEQGNPKDHHST Trigger: GGTGCTGTGGTGATCTTTGGGGTTGCCCTGCTCCTCCTCTCTTCATGGGGAGATTGTGGCATTTGCCCAGCTATGAAAGAGGATGTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS TCA 90 bp	TTCACATACTCAGCATACTCTTCTGAGGTTCCGTTTAAAAATAGATaGACATCCTCTTTCATAGCTGGGCAAATGCCACAATCTCCCCAT	+
Preference number: 5 (lower is better) Translates to: FTYSAYSSEVPFKNR*TSSFIAGQMPQSPH Trigger: ATGGGGAGATTGTGGCATTTGCCCAGCTATGAAAGAGGATGTTCATCTATTTTTAAACGGAACCTCAGAAGAGTATGCTGAGTATGTGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS TCA 72 bp	CTCTTTCATAGCTGGGCAAATGCCACAATCTCCCCATaGAGAGAGGAGGAGCAGGGCAACCCCAAAGATCAC	+
Preference number: 6 (lower is better) Translates to: LFHSWANATISP*REEEQGNPKDH Trigger: GTGATCTTTGGGGTTGCCCTGCTCCTCCTCTCTTCATGGGGAGATTGTGGCATTTGCCCAGCTATGAAAGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000187257.2
CDS TCA 72 bp	TCAGCATACTCTTCTGAGGTTCCGTTTAAAAATAGATaGACATCCTCTTTCATAGCTGGGCAAATGCCACAA	+
Preference number: 6 (lower is better) Translates to: SAYSSEVPFKNR*TSSFIAGQMPQ Trigger: TTGTGGCATTTGCCCAGCTATGAAAGAGGATGTTCATCTATTTTTAAACGGAACCTCAGAAGAGTATGCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000187257.2