Pregenerated sensors for SCG3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032181Ensembl transcript IDs: ENSMUST00000034699.8, ENSMUST00000213324.2, ENSMUST00000214244.2, ENSMUST00000215603.2
Found 127 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACCGTCTCATCGTTTTCACGGTTAGTGAAGCCATCTTGGACTGCTaGCACCGGAGTCACTTTCTCTGGTATTTTCCCATCCTGATTCTC | + |
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Preference number: 1 (lower is better) Translates to: HRLIVFTVSEAILDC*HRSHFLWYFPILIL Trigger: GAGAATCAGGATGGGAAAATACCAGAGAAAGTGACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAACCGTGAAAACGATGAGACGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | GTGTTAGACACCGTCTCATCGTTTTCACGGTTAGTGAAGCCATCTTaGACTGCTGCCACCGGAGTCACTTTCTCTGGTATTTTCCCATCC | + |
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Preference number: 1 (lower is better) Translates to: VLDTVSSFSRLVKPS*TAATGVTFSGIFPS Trigger: GGATGGGAAAATACCAGAGAAAGTGACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAACCGTGAAAACGATGAGACGGTGTCTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | GGCCGTCTGGGTCATCTTGAAACTTGTGGTCCAGTCCACTCTTGGTaGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTTGAATCAG | + |
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Preference number: 1 (lower is better) Translates to: GRLGHLETCGPVHSW*NRTHRSVSDFWLNQ Trigger: CTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACTGGACCACAAGTTTCAAGATGACCCAGACGGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | GTCCACTCTTGGTGGAATCGTACTCATCGATCAGTTTCCGATTTTTaGTTGAATCAGCGTCTTCCACGTTCAGTTGGTTATCAAACGGGG | + |
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Preference number: 1 (lower is better) Translates to: VHSWWNRTHRSVSDF*LNQRLPRSVGYQTG Trigger: CCCCGTTTGATAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | GAAGGCCGTCTGGGTCATCTTGAAACTTGTGGTCCAGTCCACTCTTaGTGGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTTGAAT | + |
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Preference number: 1 (lower is better) Translates to: EGRLGHLETCGPVHS*WNRTHRSVSDFWLN Trigger: ATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACTGGACCACAAGTTTCAAGATGACCCAGACGGCCTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | TTGCTTCTTTTTCTGAGTCGATGCTTGTCAGTAGTGCATAGAAGTTaGGGAAATACTGGAGTTCCTCAAAGTCGTCTTCCCTGTGGGGGT | + |
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Preference number: 1 (lower is better) Translates to: LLLFLSRCLSVVHRS*GNTGVPQSRLPCGG Trigger: ACCCCCACAGGGAAGACGACTTTGAGGAACTCCAGTATTTCCCCAACTTCTATGCACTACTGACAAGCATCGACTCAGAAAAAGAAGCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 90 bp | TTTAAAAGCAGCTGTTTCTCAGAGCGTCAAGGATATGAAGAGACGTaGGTTTATTTCCGTGCCCAACAGAGATCGACTAGTGGAAACGAC | + |
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Preference number: 1 (lower is better) Translates to: FKSSCFSERQGYEET*VYFRAQQRSTSGND Trigger: GTCGTTTCCACTAGTCGATCTCTGTTGGGCACGGAAATAAACCCACGTCTCTTCATATCCTTGACGCTCTGAGAAACAGCTGCTTTTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034699.8 |
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| 3UTR CCA 90 bp | AAACAATTTTGTCAAACACTCCTCTGTCGTTCTCCTCATAAATCCTaGTGGCAATCTTATGGACGATGTCTTCAGCAGTTAAAGGAGTTC | + |
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Preference number: 1 (lower is better) Translates to: KQFCQTLLCRSPHKS*WQSYGRCLQQLKEF Trigger: GAACTCCTTTAACTGCTGAAGACATCGTCCATAAGATTGCCACCAGGATTTATGAGGAGAACGACAGAGGAGTGTTTGACAAAATTGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCCTTTCCAAGCCATTGGACAAGGTCAAGGTGTTAGACACCGTCTCATCGCCTGATTCTCGGTCCTaGTTGTGGGTTTATCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: VLLSKPLDKVKVLDTVSSPDSRS*LWVYPG Trigger: CCCTGGATAAACCCACAAGCAGGACCGAGAATCAGG...CGATGAGACGGTGTCTAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CAA 90 bp | GGTGTTAGACACCGTCTCATCGTTTTCACGGTTAGTGAAGCCATCTaGGACTGCTGCCACCGGAGTCACTTTCTCTGGTATTTTCCCATC | + |
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Preference number: 2 (lower is better) Translates to: GVRHRLIVFTVSEAI*DCCHRSHFLWYFPI Trigger: GATGGGAAAATACCAGAGAAAGTGACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAACCGTGAAAACGATGAGACGGTGTCTAACACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CAA 90 bp | TCAAAGTCGTCTTCCCTGTGGGGGTTAGTTCTCCTTTCCAAGCCATaGGACAAGGTCAAGGTGTTAGACACCGTCTCATCGTTTTCACGG | + |
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Preference number: 2 (lower is better) Translates to: SKSSSLWGLVLLSKP*DKVKVLDTVSSFSR Trigger: CCGTGAAAACGATGAGACGGTGTCTAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAGAACTAACCCCCACAGGGAAGACGACTTTGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR-3UTR GCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGAAGCTATATTGTTTTTaGTGGAACAACAGGAAGGCT | + |
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Preference number: 2 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMKLYCF*WNNRKA Trigger: AGCCTTCCTGTTGTTCCAGCAAAAACAATATAGCTT...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| 3UTR-3UTR CCA 90 bp | TGCATAGAAGTTGGGGAAATACTGGAGTTCCTCAAAGTCGTCTTCCCTGTGGGGCCTCATAAATCCTGGTaGCAATCTTATGGACGATGT | + |
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Preference number: 2 (lower is better) Translates to: CIEVGEILEFLKVVFPVGPHKSW*QSYGRC Trigger: ACATCGTCCATAAGATTGCCACCAGGATTTATGAGG...CCCCACAGGGAAGACGACTTTGAGGAACTCCAGTATTTCCCCAACTTCTATGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CAA 90 bp | AGTCCACTCTTGGTGGAATCGTACTCATCGATCAGTTTCCGATTTTaGGTTGAATCAGCGTCTTCCACGTTCAGTTGGTTATCAAACGGG | + |
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Preference number: 2 (lower is better) Translates to: SPLLVESYSSISFRF*VESASSTFSWLSNG Trigger: CCCGTTTGATAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTCTATATTGTTTTTGCTaGAACAACAGGAAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: GLRTVGSRFRLMFNPLESLYCFC*NNRKAQ Trigger: TTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAG...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| 3UTR-3UTR CCA 90 bp | AGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTTTTCCACTATATTGTTTTTGCTaGAACAACAGGAAGGCTCAA | + |
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Preference number: 2 (lower is better) Translates to: RTVGSRFRLMFNPLESFPLYCFC*NNRKAQ Trigger: TTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAG...TGGAAAAGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| 3UTR TCA 72 bp | GCCACCGGAGTCACTTTCTCTGGTATTTTCCCATCCTaGTTCTCGGTCCTGCTTGTGGGTTTATCCAGGGTC | + |
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Preference number: 3 (lower is better) Translates to: ATGVTFSGIFPS*FSVLLVGLSRV Trigger: GACCCTGGATAAACCCACAAGCAGGACCGAGAATCAGGATGGGAAAATACCAGAGAAAGTGACTCCGGTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCTCCTTTCCAAGCCATTGGACAAGGTCAAGGTGTTAGACACCGTCTCATCGGCCGTCTGGGTCATCTaGAAACTTGTGGTCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: VLLSKPLDKVKVLDTVSSAVWVI*KLVVQS Trigger: GGACTGGACCACAAGTTTCAAGATGACCCAGACGGC...CGATGAGACGGTGTCTAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAGAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | ACCGTCTCATCGTTTTCACGGTTAGTGAAGCCATCTTaGACTGCTGCCACCGGAGTCACTTTCTCTGGTATT | + |
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Preference number: 3 (lower is better) Translates to: TVSSFSRLVKPS*TAATGVTFSGI Trigger: AATACCAGAGAAAGTGACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAACCGTGAAAACGATGAGACGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR-3UTR CAA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGGGCTTCTCTACAGCTTaGCTTTTCATAAGGTATTTA | + |
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Preference number: 3 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMGFSTA*LFIRYL Trigger: TAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCC...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| 3UTR-3UTR CAA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGGGCTTCTCTACAGCTTaGCTTTTCATAAGGTATTTA | + |
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Preference number: 3 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEGFSTA*LFIRYL Trigger: TAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCC...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| 3UTR-3UTR CAA 90 bp | TGTAAAGCTTCTGCTACTTCATCTTCCAGAGTATGTGCCTGGCTTTCAGTGATCGGGGCTTCTTATGGATaGTCTCTCTTTCTCAACGGT | + |
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Preference number: 3 (lower is better) Translates to: CKASATSSSRVCAWLSVIGASYG*SLFLNG Trigger: ACCGTTGAGAAAGAGAGACAATCCATAAGAAGCCCC...GATCACTGAAAGCCAGGCACATACTCTGGAAGATGAAGTAGCAGAAGCTTTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | GGTCATCTTGAAACTTGTGGTCCAGTCCACTCTTGGTaGAATCGTACTCATCGATCAGTTTCCGATTTTTGG | + |
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Preference number: 3 (lower is better) Translates to: GHLETCGPVHSW*NRTHRSVSDFW Trigger: CCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACTGGACCACAAGTTTCAAGATGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | CTGGGTCATCTTGAAACTTGTGGTCCAGTCCACTCTTaGTGGAATCGTACTCATCGATCAGTTTCCGATTTT | + |
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Preference number: 3 (lower is better) Translates to: LGHLETCGPVHS*WNRTHRSVSDF Trigger: AAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACTGGACCACAAGTTTCAAGATGACCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | TTTCTGAGTCGATGCTTGTCAGTAGTGCATAGAAGTTaGGGAAATACTGGAGTTCCTCAAAGTCGTCTTCCC | + |
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Preference number: 3 (lower is better) Translates to: FLSRCLSVVHRS*GNTGVPQSRLP Trigger: GGGAAGACGACTTTGAGGAACTCCAGTATTTCCCCAACTTCTATGCACTACTGACAAGCATCGACTCAGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | TGTCAAACACTCCTCTGTCGTTCTCCTCATAAATCCTaGTGGCAATCTTATGGACGATGTCTTCAGCAGTTA | + |
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Preference number: 3 (lower is better) Translates to: CQTLLCRSPHKS*WQSYGRCLQQL Trigger: TAACTGCTGAAGACATCGTCCATAAGATTGCCACCAGGATTTATGAGGAGAACGACAGAGGAGTGTTTGACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | AAAGCTTCTGCTACTTCATCTTCCAGAGTATGTGCCTaGCTTTCAGTGATCAGGCCAAGATTCAGCAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: KASATSSSRVCA*LSVIRPRFSSL Trigger: TAAACTGCTGAATCTTGGCCTGATCACTGAAAGCCAGGCACATACTCTGGAAGATGAAGTAGCAGAAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | TGGTGGAATCGTACTCATCGATCAGTTTCCGATTTTTaGTTGAATCAGCGTCTTCCACGTTCAGTTGGTTAT | + |
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Preference number: 3 (lower is better) Translates to: WWNRTHRSVSDF*LNQRLPRSVGY Trigger: ATAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR TCA 72 bp | GGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTTaGATCAGCGTCTTCCACGTTCAGTTGGTTATCAAA | + |
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Preference number: 3 (lower is better) Translates to: GIVLIDQFPIFG*ISVFHVQLVIK Trigger: TTTGATAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| 3UTR CCA 72 bp | GGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATaGCAAGAGAGCTCTATTTTACTCATTTCTAAGGGA | + |
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Preference number: 3 (lower is better) Translates to: GFSTALLFIRYL*QESSILLISKG Trigger: TCCCTTAGAAATGAGTAAAATAGAGCTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTGGCTGCCTTCGGGTTTaGGGAAAGCTTGAATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGAGCLRV*GKLELG Trigger: GCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCC...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTTCTCGGTCCTGCTTGTaGGTTTATCCAGGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGASRSCL*VYPGSP Trigger: AGGAGACCCTGGATAAACCCACAAGCAGGACCGAGA...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR TCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTTGCTGTAGATGCGTTTaGTGGCGTTGGCTTCTTCCT | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGACCRCV*WRWLLP Trigger: AGGAAGAAGCCAACGCCATCAAACGCATCTACAGCA...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGGGGATTTGTCTTGGCTaGCTTCGGGTTTGGGGAAAG | + |
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Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMGICLG*LRVWGK Trigger: CTTTCCCCAAACCCGAAGGCAGCCAAGACAAATCCC...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTATTCCTTTTCCATCTTaGCGGCTTCTTCCTTGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGAIPFPS*RLLPWY Trigger: GTACCAAGGAAGAAGCCGCCAAGATGGAAAAGGAAT...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGCTTCCTTGTCGAGGATaGCCTTCTCCACATAAGCGT | + |
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Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMLPCRG*PSPHKR Trigger: ACGCTTATGTGGAGAAGGGCATCCTCGACAAGGAAG...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTTCTCCTCATAAATCCTaGTGGCAATCTTATGGACGA | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGASPHKS*WQSYGR Trigger: TCGTCCATAAGATTGCCACCAGGATTTATGAGGAGA...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTGCTTTCACTCGGCTTaGTTTCTGAAGGGAATGCCT | + |
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Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMCFHSA*FLKGMP Trigger: AGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCA...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTCTTTTTCTGAGTCGATaGTTGTCAGTAGTGCATAGA | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGALFLSR*LSVVHR Trigger: TCTATGCACTACTGACAAGCATCGACTCAGAAAAAG...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTTTCCTTTTCTGTTATTaGCCTCAGCAGATTCAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GAQVSSMPRQGLSELQGAFLFCY*PQQIQV Trigger: AACTTGAATCTGCTGAGGGCAATAACAGAAAAGGAA...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGGCTGCCTTCGGGTTTaGGGAAAGCTTGAATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLGCLRV*GKLELG Trigger: GCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCC...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | TGCATAGAAGTTGGGGAAATACTGGAGTTCCTCAAAGTCGTCTTCCCTGTGGGGGGCTGCCTTCGGGTTTaGGGAAAGCTTGAATTGGGC | + |
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Preference number: 4 (lower is better) Translates to: CIEVGEILEFLKVVFPVGGCLRV*GKLELG Trigger: GCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCC...CCCCACAGGGAAGACGACTTTGAGGAACTCCAGTATTTCCCCAACTTCTATGCA 52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTATGCAGGGATTTGTCTTaGCTGCCTTCGGGTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLCRDLS*LPSGLG Trigger: CCCCAAACCCGAAGGCAGCCAAGACAAATCCCTGCA...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTCGGTCCTGCTTGTaGGTTTATCCAGGGTCTCCT | + |
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Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLESRSCL*VYPGSP Trigger: AGGAGACCCTGGATAAACCCACAAGCAGGACCGAGA...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR GCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTCCTGATTCTCGGTCCTaGTTGTGGGTTTATCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESPDSRS*LWVYPG Trigger: CCCTGGATAAACCCACAAGCAGGACCGAGAATCAGG...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGCCTCATAAATCCTGGTaGCAATCTTATGGACGATGT | + |
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Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMPHKSW*QSYGRC Trigger: ACATCGTCCATAAGATTGCCACCAGGATTTATGAGG...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTCTCCTCATAAATCCTaGTGGCAATCTTATGGACGA | + |
|
Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMSPHKS*WQSYGR Trigger: TCGTCCATAAGATTGCCACCAGGATTTATGAGGAGA...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| 3UTR CAA 72 bp | TCTTCCCTGTGGGGGTTAGTTCTCCTTTCCAAGCCATaGGACAAGGTCAAGGTGTTAGACACCGTCTCATCG | + |
|
Preference number: 4 (lower is better) Translates to: SSLWGLVLLSKP*DKVKVLDTVSS Trigger: CGATGAGACGGTGTCTAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAGAACTAACCCCCACAGGGAAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTAGACACCGTCTCATCGTTTTCACGGTTAGTGAAGCCATCTTGGACTGCTGGGATTTGTCTTGGCTaGCTTCGGGTTTGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VLDTVSSFSRLVKPSWTAGICLG*LRVWGK Trigger: CTTTCCCCAAACCCGAAGGCAGCCAAGACAAATCCC...AGCAGTCCAAGATGGCTTCACTAACCGTGAAAACGATGAGACGGTGTCTAACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTGGTCCAGTCCACTCTTaGTGGAATCGTACTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESGPVHS*WNRTHR Trigger: TCGATGAGTACGATTCCACCAAGAGTGGACTGGACC...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGGTCCAGTCCACTCTTaGTGGAATCGTACTCATCGA | + |
|
Preference number: 4 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLGPVHS*WNRTHR Trigger: TCGATGAGTACGATTCCACCAAGAGTGGACTGGACC...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| 3UTR CAA 72 bp | AGTTCCATCCAGTTGATGAAGGCCGTCTGGGTCATCTaGAAACTTGTGGTCCAGTCCACTCTTGGTGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SSIQLMKAVWVI*KLVVQSTLGGI Trigger: GATTCCACCAAGAGTGGACTGGACCACAAGTTTCAAGATGACCCAGACGGCCTTCATCAACTGGATGGAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR GCA 90 bp | GTAAGCTATATTGTTTTTGCTGGAACAACAGGAAGGCTCAAGCTGCCCGCCATTGGGATTTGTCTTGGCTaGCTTCGGGTTTGGGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: VSYIVFAGTTGRLKLPAIGICLG*LRVWGK Trigger: CTTTCCCCAAACCCGAAGGCAGCCAAGACAAATCCC...AATGGCGGGCAGCTTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAGCTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGCTTTTTAATCTTGTCTaGCTCTGCCTCAGCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLELFNLV*LCLSDL Trigger: CAGATCGCTGAGGCAGAGGCAGACAAGATTAAAAAG...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTTGCTTTCACTCGGCTTaGTTTCTGAAGGGAATGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESCFHSA*FLKGMP Trigger: AGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCA...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGCTATATTGTTTTTGCTGGAACAACAGGAAGGCTCAAGCTGCCCGCCATTTTAGTGAAGCCATCTTaGACTGCTGCCACCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: VSYIVFAGTTGRLKLPAILVKPS*TAATGV Trigger: GACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAA...AATGGCGGGCAGCTTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAGCTTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | GCCTCTCAGAGCTTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTTCTAGCTTGTTCTTaGTCTGCAGAGCAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASQSFRGLRTVGSRFRLMFLACS*SAEQLF Trigger: AAACAATTGCTCTGCAGACCAAGAACAAGCTAGAAA...CATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAAGCTCTGAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTACTTTTTAATCTTGTCTaGCTCTGCCTCAGCGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLLFNLV*LCLSDL Trigger: CAGATCGCTGAGGCAGAGGCAGACAAGATTAAAAAG...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTTTTCCATTAGTGAAGCCATCTTaGACTGCTGCCACCGGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVGSRFRLMFNPLESFPLVKPS*TAATGV Trigger: GACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAA...TGGAAAAGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGGTAGTGCATAGAAGTTaGGGAAATACTGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEVVHRS*GNTGVP Trigger: AGGAACTCCAGTATTTCCCCAACTTCTATGCACTAC...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTTCCTGACTCTTCTCTaGTGGAGTTTTGCTATCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEFLTLL*WSFAIS Trigger: ACTGATAGCAAAACTCCACCAGAGAAGAGTCAGGAA...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGTGCAGGGATTTGTCTTaGCTGCCTTCGGGTTTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARECRDLS*LPSGLG Trigger: CCCCAAACCCGAAGGCAGCCAAGACAAATCCCTGCA...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTGTAGTGCATAGAAGTTaGGGAAATACTGGAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESVVHRS*GNTGVP Trigger: AGGAACTCCAGTATTTCCCCAACTTCTATGCACTAC...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTCGACAGAAGAATAATTaGTTTCACTCGGCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESRQKNN*FHSACF Trigger: AAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCG...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTTCCTTTTCTGTTATTaGCCTCAGCAGATTCAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEFLFCY*PQQIQV Trigger: AACTTGAATCTGCTGAGGGCAATAACAGAAAAGGAA...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCCTGATTCTCGGTCCTaGTTGTGGGTTTATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMAREPDSRS*LWVYPG Trigger: CCCTGGATAAACCCACAAGCAGGACCGAGAATCAGG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | GGTCCAGTCCACTCTTGGTGGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTGCTTTCACTCGGCTTaGTTTCTGTTCATTCAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPVHSWWNRTHRSVSDFWCFHSA*FLFIQR Trigger: CCTTTGAATGAACAGAAAGCAAGCCGAGTGAAAGCA...CCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAAGAGTGGACTGGACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR CCA 90 bp | GTAAGCTATATTGTTTTTGCTGGAACAACAGGAAGGCTCAAGCTGCCCGCCATTCTGGTGGCAATCTTATaGACGATGTCTTCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSYIVFAGTTGRLKLPAILVAIL*TMSSAV Trigger: AACTGCTGAAGACATCGTCCATAAGATTGCCACCAG...AATGGCGGGCAGCTTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAGCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR TCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGTGCTGTAGATGCGTTTaGTGGCGTTGGCTTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARECCRCV*WRWLLP Trigger: AGGAAGAAGCCAACGCCATCAAACGCATCTACAGCA...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTCTTAATTCTCTATTATaGAGGGATTTGTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRTVGSRFRLMFNPLESLNSLL*RDLSWL Trigger: CAGCCAAGACAAATCCCTGCATAATAGAGAATTAAG...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGCGTAATCTTCTTTGTTaGCCTTCTTGTTATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGLRTVGSRFRLMFNPLERNLLC*PSCYVS Trigger: AGAAACATAACAAGAAGGGCAACAAAGAAGATTACG...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGAAGTCGTCTTCCCTGTaGGGGTTAGTTCTCCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMAREKSSSL*GLVLLS Trigger: GGAAAGGAGAACTAACCCCCACAGGGAAGACGACTT...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTACGTAATCTTCTTTGTTaGCCTTCTTGTTATGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLRNLLC*PSCYVS Trigger: AGAAACATAACAAGAAGGGCAACAAAGAAGATTACG...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGCTTCCTTGTCGAGGATaGCCTTCTCCACATAAGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KNLGFSTALLFIRYLWQELPCRG*PSPHKR Trigger: ACGCTTATGTGGAGAAGGGCATCCTCGACAAGGAAG...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| 3UTR CAA 72 bp | TTGGTGGAATCGTACTCATCGATCAGTTTCCGATTTTaGGTTGAATCAGCGTCTTCCACGTTCAGTTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: LVESYSSISFRF*VESASSTFSWL Trigger: TAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCACCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR GCA 90 bp | TGTAAAGCTTCTGCTACTTCATCTTCCAGAGTATGTGCCTGGCTTTCAGTGATCCGACAGAAGAATAATTaGTTTCACTCGGCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: CKASATSSSRVCAWLSVIRQKNN*FHSACF Trigger: AAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCG...GATCACTGAAAGCCAGGCACATACTCTGGAAGATGAAGTAGCAGAAGCTTTACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGTTGATGAAGGCCGTCTaGGTCATCTTGAAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARELMKAV*VILKLV Trigger: CACAAGTTTCAAGATGACCCAGACGGCCTTCATCAA...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCTGGTGGCAATCTTATaGACGATGTCTTCAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARELVAIL*TMSSAV Trigger: AACTGCTGAAGACATCGTCCATAAGATTGCCACCAG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGATTCCTTTTCCATCTTaGCGGCTTCTTCCTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMAREIPFPS*RLLPWY Trigger: GTACCAAGGAAGAAGCCGCCAAGATGGAAAAGGAAT...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| 3UTR CAA 72 bp | TGGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTaGAATCAGCGTCTTCCACGTTCAGTTGGTTATCAA | + |
|
Preference number: 4 (lower is better) Translates to: WNRTHRSVSDFW*NQRLPRSVGYQ Trigger: TTGATAACCAACTGAACGTGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGTTGATGAAGGCCGTCTaGGTCATCTTGAAACTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGFSTALLFIRYLWQELMKAV*VILKLV Trigger: CACAAGTTTCAAGATGACCCAGACGGCCTTCATCAA...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCCTCATAAATCCTGGTaGCAATCTTATGGACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMAREPHKSW*QSYGRC Trigger: ACATCGTCCATAAGATTGCCACCAGGATTTATGAGG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCTGACTCTTCTCTGGTaGAGTTTTGCTATCAGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARELTLLW*SFAISS Trigger: ACTACTGATAGCAAAACTCCACCAGAGAAGAGTCAG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCTTTTTCTGAGTCGATaGTTGTCAGTAGTGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARELFLSR*LSVVHR Trigger: TCTATGCACTACTGACAAGCATCGACTCAGAAAAAG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGCGACAGAAGAATAATTaGTTTCACTCGGCTTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNLGFSTALLFIRYLWQERQKNN*FHSACF Trigger: AAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCG...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR GCA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGCTTAATTCTCTATTATaGAGGGATTTGTCTTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNLGFSTALLFIRYLWQELNSLL*RDLSWL Trigger: CAGCCAAGACAAATCCCTGCATAATAGAGAATTAAG...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGTCTCCTCATAATTGTTaGCCTCTTTTGAAATCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: KPRLLYSFAFHKVFMARESPHNC*PLLKSV Trigger: AACTGATTTCAAAAGAGGCCAACAATTATGAGGAGA...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CCA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGTTTCTAGCTTGTTCTTaGTCTGCAGAGCAATTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KNLGFSTALLFIRYLWQEFLACS*SAEQLF Trigger: AAACAATTGCTCTGCAGACCAAGAACAAGCTAGAAA...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS TCA 90 bp | CTTGGCTGCCTTCGGGTTTGGGGAAAGCTTGAATTGGGCCGCTGTTaGGCACCAACACCAGTATCCAAGAGCCGGTCCAAAGGAACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LGCLRVWGKLELGRC*APTPVSKSRSKGTP Trigger: TGGGGTTCCTTTGGACCGGCTCTTGGATACTGGTGTTGGTGCTCAACAGCGGCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 ENSMUST00000214244.2 |
||
| CDS-3UTR CAA 90 bp | GGTGCTCAGGTGTCTAGCATGCCGAGACAGGGCCTCTCAGAGCTTCAGGGGGCTTATTCCTTTTCCATCTaGGCGGCTTCTTCCTTGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GAQVSSMPRQGLSELQGAYSFSI*AASSLV Trigger: TACCAAGGAAGAAGCCGCCAAGATGGAAAAGGAATA...AGCCCCCTGAAGCTCTGAGAGGCCCTGTCTCGGCATGCTAGACACCTGAGCACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
||
| CDS-3UTR CAA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGGTTAGTGAAGCCATCTaGGACTGCTGCCACCGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEVSEAI*DCCHRS Trigger: ACTCCGGTGGCAGCAGTCCAAGATGGCTTCACTAAC...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAATGCGTTTGATGGCGTaGGCTTCTTCCTTGTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLMRLMA*ASSLSR Trigger: CCTCGACAAGGAAGAAGCCAACGCCATCAAACGCAT...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGGGGGCTTCTTATGGATaGTCTCTCTTTCTCAACGGT | + |
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Preference number: 5 (lower is better) Translates to: RGLRTVGSRFRLMFNPLEGASYG*SLFLNG Trigger: ACCGTTGAGAAAGAGAGACAATCCATAAGAAGCCCC...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | TTCAGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTATTGGCGGCTTCTTCCTaGGTACTGTCTGTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FRGLRTVGSRFRLMFNPLLAASS*VLSVSS Trigger: GGAAGAAACAGACAGTACCAAGGAAGAAGCCGCCAA...TAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCTGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTAATGCCTTTTTAATCTaGTCTGCCTCTGCCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: GLRTVGSRFRLMFNPLESNAFLI*SASASA Trigger: CGCTGAGGCAGAGGCAGACAAGATTAAAAAGGCATT...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | TGGAATCGTACTCATCGATCAGTTTCCGATTTTTGGTTGAATCAGCGTCTTCCAGGGTTTGGGGAAAGCTaGAATTGGGCCGCTGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: WNRTHRSVSDFWLNQRLPGFGES*NWAAVE Trigger: CTCAACAGCGGCCCAATTCAAGCTTTCCCCAAACCC...TGGAAGACGCTGATTCAACCAAAAATCGGAAACTGATCGATGAGTACGATTCCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000215603.2 |
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| CDS-3UTR CAA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGGGGTTTGGGGAAAGCTaGAATTGGGCCGCTGTTGAG | + |
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Preference number: 5 (lower is better) Translates to: KPRLLYSFAFHKVFMAREGFGES*NWAAVE Trigger: CTCAACAGCGGCCCAATTCAAGCTTTCCCCAAACCC...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGGCCGTCTGGGTCATCTaGAAACTTGTGGTCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KPRLLYSFAFHKVFMAREAVWVI*KLVVQS Trigger: GGACTGGACCACAAGTTTCAAGATGACCCAGACGGC...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AGGGGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTTTGTTGCCCTTCTaGTTATGTTTCTTCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RGLRTVGSRFRLMFNPLESLLPF*LCFFSH Trigger: ATGGCTGAAGAAACATAACAAGAAGGGCAACAAAGA...CTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | GGGCTGAGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTATAAGCGTCAGCTTGTaGGTTGATAAAGTCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: GLRTVGSRFRLMFNPLESISVSL*VDKVPH Trigger: ATGAGGGACTTTATCAACCAACAAGCTGACGCTTAT...AGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCTCAGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGGCCGTCTGGGTCATCTaGAAACTTGTGGTCCAGTCC | + |
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Preference number: 5 (lower is better) Translates to: KNLGFSTALLFIRYLWQEAVWVI*KLVVQS Trigger: GGACTGGACCACAAGTTTCAAGATGACCCAGACGGC...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | GTAAGCTATATTGTTTTTGCTGGAACAACAGGAAGGCTCAAGCTGCCCGCCATTTATTCCTTTTCCATCTaGGCGGCTTCTTCCTTGGTA | + |
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Preference number: 5 (lower is better) Translates to: VSYIVFAGTTGRLKLPAIYSFSI*AASSLV Trigger: TACCAAGGAAGAAGCCGCCAAGATGGAAAAGGAATA...AATGGCGGGCAGCTTGAGCCTTCCTGTTGTTCCAGCAAAAACAATATAGCTTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGATGCGTTTGATGGCGTaGGCTTCTTCCTTGTCGAGG | + |
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Preference number: 5 (lower is better) Translates to: KNLGFSTALLFIRYLWQEMRLMA*ASSLSR Trigger: CCTCGACAAGGAAGAAGCCAACGCCATCAAACGCAT...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS TCA 90 bp | CAAGTTATCGACAGAAGAATAATTGCTTTCACTCGGCTTGCTTTCTaGAGGGAATGCCTTTTTAATCTTGTCTGCCTCTGCCTCAGCGAT | + |
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Preference number: 5 (lower is better) Translates to: QVIDRRIIAFTRLAF*RECLFNLVCLCLSD Trigger: ATCGCTGAGGCAGAGGCAGACAAGATTAAAAAGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCGATAACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGCTCCTTTCCAAGCCATaGGACAAGGTCAAGGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: KPRLLYSFAFHKVFMARELLSKP*DKVKVL Trigger: TAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAG...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGTTGGCGGCTTCTTCCTaGGTACTGTCTGTTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: KNLGFSTALLFIRYLWQELAASS*VLSVSS Trigger: GGAAGAAACAGACAGTACCAAGGAAGAAGCCGCCAA...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAATGCCTTTTTAATCTaGTCTGCCTCTGCCTCAGCG | + |
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Preference number: 5 (lower is better) Translates to: KNLGFSTALLFIRYLWQENAFLI*SASASA Trigger: CGCTGAGGCAGAGGCAGACAAGATTAAAAAGGCATT...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAAAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGCTCCTTTCCAAGCCATaGGACAAGGTCAAGGTGTTA | + |
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Preference number: 5 (lower is better) Translates to: KNLGFSTALLFIRYLWQELLSKP*DKVKVL Trigger: TAACACCTTGACCTTGTCCAATGGCTTGGAAAGGAG...CTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AGGACAGTGGGGAGTAGGTTCAGACTTATGTTCAACCCATTAGAGTCTTTTCCATCTTTGTTGCCCTTCTaGTTATGTTTCTTCAGCCAT | + |
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Preference number: 5 (lower is better) Translates to: RTVGSRFRLMFNPLESFPSLLPF*LCFFSH Trigger: ATGGCTGAAGAAACATAACAAGAAGGGCAACAAAGA...TGGAAAAGACTCTAATGGGTTGAACATAAGTCTGAACCTACTCCCCACTGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS CCA 90 bp | AGCAATTGTTTCATCCAAGTTTTCAAGGTAGGACACGCCTTCCTCTaGAGATATCGTACCGTATTTCACCATCATTTTCACGAAGTCAAT | + |
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Preference number: 5 (lower is better) Translates to: SNCFIQVFKVGHAFL*RYRTVFHHHFHEVN Trigger: ATTGACTTCGTGAAAATGATGGTGAAATACGGTACGATATCTCCAGAGGAAGGCGTGTCCTACCTTGAAAACTTGGATGAAACAATTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS-3UTR CAA 90 bp | AAACCTCGGCTTCTCTACAGCTTTGCTTTTCATAAGGTATTTATGGCAAGAGAGATAAGCGTCAGCTTGTaGGTTGATAAAGTCCCTCAT | + |
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Preference number: 5 (lower is better) Translates to: KPRLLYSFAFHKVFMAREISVSL*VDKVPH Trigger: ATGAGGGACTTTATCAACCAACAAGCTGACGCTTAT...CTCTCTTGCCATAAATACCTTATGAAAAGCAAAGCTGTAGAGAAGCCGAGGTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS GCA 90 bp | TCTTATGGATTGTCTCTCTTTCTCAACGGTTTCCTTTTCTGTTATTaGCCTCAGCAGATTCAAGTTATCGACAGAAGAATAATTGCTTTC | + |
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Preference number: 5 (lower is better) Translates to: SYGLSLFLNGFLFCY*PQQIQVIDRRIIAF Trigger: GAAAGCAATTATTCTTCTGTCGATAACTTGAATCTGCTGAGGGCAATAACAGAAAAGGAAACCGTTGAGAAAGAGAGACAATCCATAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 ENSMUST00000214244.2 |
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| CDS TCA 72 bp | CTTCGGGTTTGGGGAAAGCTTGAATTGGGCCGCTGTTaGGCACCAACACCAGTATCCAAGAGCCGGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: LRVWGKLELGRC*APTPVSKSRSK Trigger: TTTGGACCGGCTCTTGGATACTGGTGTTGGTGCTCAACAGCGGCCCAATTCAAGCTTTCCCCAAACCCGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 ENSMUST00000214244.2 |
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| CDS TCA 72 bp | TTGCTTTCTTGGCTGCCTTCGGGTTTGGGGAAAGCTTaGATTGGGCCGCTGTTGAGCACCAACACCAGTATC | + |
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Preference number: 6 (lower is better) Translates to: LLSWLPSGLGKA*IGPLLSTNTSI Trigger: GATACTGGTGTTGGTGCTCAACAGCGGCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCCAAGAAAGCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS GCA 72 bp | AAGAATAATTGCTTTCACTCGGCTTGCTTTCTTGGCTaGCTTCGGGTTTGGGGAAAGCTTGAATTGGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: KNNCFHSACFLG*LRVWGKLELGR Trigger: GCGGCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCCAAGAAAGCAAGCCGAGTGAAAGCAATTATTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS CAA 90 bp | CAAGTTATCGACAGAAGAATAATTGCTTTCACTCGGCTTGCTTTCTaGGCTGCCTTCGGGTTTGGGGAAAGCTTGAATTGGGCCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: QVIDRRIIAFTRLAF*AAFGFGESLNWAAV Trigger: AACAGCGGCCCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCCAAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCGATAACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS GCA 72 bp | CCCTCAGCAGATTCAAGTTATCGACAGAAGAATAATTaGTTTCACTCGGCTTGCTTTCTTGGCTGCCTTCGG | + |
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Preference number: 6 (lower is better) Translates to: PSADSSYRQKNN*FHSACFLGCLR Trigger: CCGAAGGCAGCCAAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCGATAACTTGAATCTGCTGAGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS CAA 72 bp | GACAGAAGAATAATTGCTTTCACTCGGCTTGCTTTCTaGGCTGCCTTCGGGTTTGGGGAAAGCTTGAATTGG | + |
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Preference number: 6 (lower is better) Translates to: DRRIIAFTRLAF*AAFGFGESLNW Trigger: CCAATTCAAGCTTTCCCCAAACCCGAAGGCAGCCAAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS GCA 72 bp | AGTTATCGACAGAAGAATAATTGCTTTCACTCGGCTTaGTTTCTTGGCTGCCTTCGGGTTTGGGGAAAGCTT | + |
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Preference number: 6 (lower is better) Translates to: SYRQKNNCFHSA*FLGCLRVWGKL Trigger: AAGCTTTCCCCAAACCCGAAGGCAGCCAAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCGATAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000214244.2 |
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| CDS CAA 72 bp | CTCGGCTTGCTTTCTGAAGGGAATGCCTTTTTAATCTaGTCTGCCTCTGCCTCAGCGATCTGTTCATTCAAA | + |
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Preference number: 6 (lower is better) Translates to: LGLLSEGNAFLI*SASASAICSFK Trigger: TTTGAATGAACAGATCGCTGAGGCAGAGGCAGACAAGATTAAAAAGGCATTCCCTTCAGAAAGCAAGCCGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS CAA 90 bp | TTGCTTTCACTCGGCTTGCTTTCTGAAGGGAATGCCTTTTTAATCTaGTCTGCCTCTGCCTCAGCGATCTGTTCATTCAAAGGTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: LLSLGLLSEGNAFLI*SASASAICSFKGLS Trigger: AGAAAGACCTTTGAATGAACAGATCGCTGAGGCAGAGGCAGACAAGATTAAAAAGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS GCA 72 bp | CCCTCAGCAGATTCAAGTTATCGACAGAAGAATAATTaGTTTCACTCGGCTTGCTTTCTGAAGGGAATGCCT | + |
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Preference number: 6 (lower is better) Translates to: PSADSSYRQKNN*FHSACFLKGMP Trigger: AGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTCGATAACTTGAATCTGCTGAGGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS TCA 72 bp | GACAGAAGAATAATTGCTTTCACTCGGCTTGCTTTCTaGAGGGAATGCCTTTTTAATCTTGTCTGCCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: DRRIIAFTRLAF*RECLFNLVCLC Trigger: GCAGAGGCAGACAAGATTAAAAAGGCATTCCCTTCAGAAAGCAAGCCGAGTGAAAGCAATTATTCTTCTGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS CCA 72 bp | TTCATCCAAGTTTTCAAGGTAGGACACGCCTTCCTCTaGAGATATCGTACCGTATTTCACCATCATTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: FIQVFKVGHAFL*RYRTVFHHHFH Trigger: GTGAAAATGATGGTGAAATACGGTACGATATCTCCAGAGGAAGGCGTGTCCTACCTTGAAAACTTGGATGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS TCA 72 bp | AGCGTCAGCTTGTTGGTTGATAAAGTCCCTCATCTTTaGAAGGTCGTAATCTTCTTTGTTGCCCTTCTTGTT | + |
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Preference number: 6 (lower is better) Translates to: SVSLLVDKVPHL*KVVIFFVALLV Trigger: AACAAGAAGGGCAACAAAGAAGATTACGACCTTTCAAAGATGAGGGACTTTATCAACCAACAAGCTGACGCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 |
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| CDS CAA 72 bp | ATTGTCTCTCTTTCTCAACGGTTTCCTTTTCTGTTATaGCCCTCAGCAGATTCAAGTTATCGACAGAAGAAT | + |
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Preference number: 6 (lower is better) Translates to: IVSLSQRFPFLL*PSADSSYRQKN Trigger: ATTCTTCTGTCGATAACTTGAATCTGCTGAGGGCAATAACAGAAAAGGAAACCGTTGAGAAAGAGAGACAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 ENSMUST00000214244.2 |
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| CDS CAA 90 bp | TTCTTATGGATTGTCTCTCTTTCTCAACGGTTTCCTTTTCTGTTATaGCCCTCAGCAGATTCAAGTTATCGACAGAAGAATAATTGCTTT | + |
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Preference number: 6 (lower is better) Translates to: FLWIVSLSQRFPFLL*PSADSSYRQKNNCF Trigger: AAAGCAATTATTCTTCTGTCGATAACTTGAATCTGCTGAGGGCAATAACAGAAAAGGAAACCGTTGAGAAAGAGAGACAATCCATAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000034699.8 ENSMUST00000213324.2 ENSMUST00000214244.2 |
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