Pregenerated sensors for SCG2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050711Ensembl transcript IDs: ENSMUST00000049972.6, ENSMUST00000185234.2
Found 179 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACATGTAGGGGGCTTACTTaGGGGAAAGAAGGGAAATTG | + |
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Preference number: 2 (lower is better) Translates to: SPKMTWSHLPIHHFKDITCRGLT*GKEGKL Trigger: CAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACA...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| 3UTR TCA 72 bp | CACACATCCACACACAACGTAACAGCTCAGAATAAGTaGAGCAGATCCCCCAAAATGACCTGGAGTCATCTG | + |
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Preference number: 3 (lower is better) Translates to: HTSTHNVTAQNK*SRSPKMTWSHL Trigger: CAGATGACTCCAGGTCATTTTGGGGGATCTGCTTCACTTATTCTGAGCTGTTACGTTGTGTGTGGATGTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGCCCGCTTGGCAAGATaGTCCCTCCCCTGCTCTGCC | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLARLAR*SLPCSA Trigger: GGCAGAGCAGGGGAGGGAGCATCTTGCCAAGCGGGC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGAATCAAGGGGCTTCTaGAGAAGCCGGGCTGCCCTG | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLESRGF*RSRAAL Trigger: CAGGGCAGCCCGGCTTCTTCAGAAGCCCCTTGATTC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000049972.6 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGCCCCAGATGTTCCTTaGTGGCCTGCTCGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLAPDVP*WPARAA Trigger: AGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGCAAGCTCCAGATCCTaGTCTGGCTCCACCAACCCA | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLASSRS*SGSTNP Trigger: TGGGTTGGTGGAGCCAGAGCAGGATCTGGAGCTTGC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGCTCCCCTGCTCTGCCTaGTCTTGGTTGAGGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLLPCSA*SWLRYS Trigger: GGAGTACCTCAACCAAGAGCAGGCAGAGCAGGGGAG...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGCACGACCAGGTGCCTTaGGATACCCACCCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLHDQVP*DTHPWR Trigger: TCTCCAAGGGTGGGTATCCCAAGGCACCTGGTCGTG...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGAGATGCTCCCTCCCCTaGTCTGCCTGCTCTTGGTTG | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWRCSLP*SACSWL Trigger: CAACCAAGAGCAGGCAGAGCAGGGGAGGGAGCATCT...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTATTTGGCCCACTCTGTaGCCTCCCACTGCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLIWPTL*PPTAHS Trigger: GCTGTGGGCAGTGGGAGGTCACAGAGTGGGCCAAAT...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049972.6 |
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| CDS-3UTR GCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGTCTCACGCTTCTGGTTaGTTGGCCCTGTCAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLSHASG*LALSVS Trigger: GGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGA...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGACCCTCTCACGCTTCTaGTTGCTTGGCCCTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWTLSRF*LLGPVS Trigger: ACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGT...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGAGCCCCAACTGCCCTaGACGTTTCATCTCTTCATT | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLEPQLP*TFHLFI Trigger: AATGAAGAGATGAAACGTTCAGGGCAGTTGGGGCTC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTTGGAGGTCATCCTCTaGGGAGACTGGACTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLEVIL*GDWTGH Trigger: GTGCCCAGTCCAGTCTCCTCAGAGGATGACCTCCAA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGCCCCAGATGTTCCTTaGTGGCCTGCTCGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITAPDVP*WPARAA Trigger: AGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGCTATTTTCTCCTCTATaGGGCTCCAGTCTTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLLFSPL*GSSLLP Trigger: GGGGAGAAGACTGGAGCCCCATAGAGGAGAAAATAG...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGAGCTGCTCTTCTTCTTaGAGGTCATCCTCTGAGGAG | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLSCSSS*RSSSEE Trigger: CTCCTCAGAGGATGACCTCCAAGAAGAAGAGCAGCT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGTTTGGAGGCATCCTCTaGGAGTTGGTCTTTACTCTC | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLFGGIL*ELVFTL Trigger: GAGAGTAAAGACCAACTCTCAGAGGATGCCTCCAAA...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACTCCCCTGCTCTGCCTaGTCTTGGTTGAGGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITLPCSA*SWLRYS Trigger: GGAGTACCTCAACCAAGAGCAGGCAGAGCAGGGGAG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR GCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAGATGCTCCCTCCCCTaGTCTGCCTGCTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITRCSLP*SACSWL Trigger: CAACCAAGAGCAGGCAGAGCAGGGGAGGGAGCATCT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTAGCAGCTGGTTTCGCTaGAAGGAAGCTGCTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSSWFR*KEAASA Trigger: AGCCGAAGCAGCTTCCTTCCAGCGAAACCAGCTGCT...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGTAGGGATTGTAGTCTaGGCTGCTTTCTTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLVGIVV*AAFFSV Trigger: CACAGAGAAGAAAGCAGCCCAGACTACAATCCCTAC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGAGCTCTCTGCCAAGTaGCTTTCTTCTCCGTTTTCT | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLELSAK*LSSPFS Trigger: AGAAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGAGGGTAGCAAGACTTTaGGGTGTGTATTGTTCCTCG | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLRVARL*GVYCSS Trigger: CGAGGAACAATACACACCCCAAAGTCTTGCTACCCT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGAGTTTCCCAAGCTCTTaGAACACAGACTCCAGGGTA | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLSFPSS*NTDSRV Trigger: TACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTACCCTCTCACGCTTCTaGTTGCTTGGCCCTGTCAGT | + |
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Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLTLSRF*LLGPVS Trigger: ACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGT...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACACGACCAGGTGCCTTaGGATACCCACCCTTGGAGA | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITHDQVP*DTHPWR Trigger: TCTCCAAGGGTGGGTATCCCAAGGCACCTGGTCGTG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGCTCTCTTCAGCTGGTTaGTATTCAGGAGCTCAGGGT | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWLSSAG*YSGAQG Trigger: ACCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAG...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGGACATTCTCCAATCTaGGGTCTGGTTCTTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLGHSPI*GLVLSE Trigger: TTCAGAAAGAACCAGACCTCAGATTGGAGAATGTCC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGTGTGAGCTTGCTGCCTaGGCTTTTCTATGTACTCCA | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWCELAA*AFLCTP Trigger: TGGAGTACATAGAAAAGCTCAGGCAGCAAGCTCACA...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGCCGTTTTCTTTGAGTTaGAGAGGAACAGAGACGCCT | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWPFSLS*RGTETP Trigger: AGGCGTCTCTGTTCCTCTTCAACTCAAAGAAAACGG...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAACTCAGTGCATCCCTTaGGCTCTCTGCCAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITTQCIP*ALCQVA Trigger: AGCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGACCTCTTCCTGGGTTTaGGTCTCTATTTTCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLTSSWV*VSIFSS Trigger: AGAGGAGAAAATAGAGACTCAAACCCAGGAAGAGGT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGTTGGAGGTCATCCTCTaGGGAGACTGGACTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGLEVIL*GDWTGH Trigger: GTGCCCAGTCCAGTCTCCTCAGAGGATGACCTCCAA...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCTGCCTGCTCTTGGTTaGGGTACTCCAGCACTTTCA | + |
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Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLPALG*GTPALS Trigger: TGAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAGCAGCTGGTTTCGCTaGAAGGAAGCTGCTTCGGCT | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSSWFR*KEAASA Trigger: AGCCGAAGCAGCTTCCTTCCAGCGAAACCAGCTGCT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGTAGGGATTGTAGTCTaGGCTGCTTTCTTCTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWVGIVV*AAFFSV Trigger: CACAGAGAAGAAAGCAGCCCAGACTACAATCCCTAC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACTCTTTGGGGGCAGATaGCGGCTCATTTTCAGCCTG | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITLFGGR*RLIFSL Trigger: CAGGCTGAAAATGAGCCGCCATCTGCCCCCAAAGAG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAGGGCTTGTTCTCTTTaGGGGCAGATGGCGGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITRACSL*GQMAAH Trigger: ATGAGCCGCCATCTGCCCCCAAAGAGAACAAGCCCT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGCTACTTTGGGAATCTaGTTGGCTCTAGATTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLATLGI*LALDFP Trigger: TGGGAAATCTAGAGCCAACCAGATTCCCAAAGTAGC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGGACATTCTCCAATCTaGGGTCTGGTTCTTTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWGHSPI*GLVLSE Trigger: TTCAGAAAGAACCAGACCTCAGATTGGAGAATGTCC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGACTCAGTGCATCCCTTaGGCTCTCTGCCAAGTGGCT | + |
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Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGTQCIP*ALCQVA Trigger: AGCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGAGAGCATCTTACTTTaGAACATGTCTGGACGGTCT | + |
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Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWESILL*NMSGRS Trigger: AGACCGTCCAGACATGTTTCAAAGTAAGATGCTCTC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACTGCCTGCTCTTGGTTaGGGTACTCCAGCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITLPALG*GTPALS Trigger: TGAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGATTGTAGTCTGGGCTaGTTTCTTCTCTGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWDCSLG*FLLCEL Trigger: AAGCTCACAGAGAAGAAAGCAGCCCAGACTACAATC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTGGCTCATTTTCAGCCTaGCTCAGAGCCTCGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLGSFSA*LRASSI Trigger: AATACTCGAGGCTCTGAGGCAGGCTGAAAATGAGCC...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCTCTTTGGGGGCAGATaGCGGCTCATTTTCAGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGLFGGR*RLIFSL Trigger: CAGGCTGAAAATGAGCCGCCATCTGCCCCCAAAGAG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGAGGGCTTGTTCTCTTTaGGGGCAGATGGCGGCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGRACSL*GQMAAH Trigger: ATGAGCCGCCATCTGCCCCCAAAGAGAACAAGCCCT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCTATTTTCTCCTCTATaGGGCTCCAGTCTTCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLFSPL*GSSLLP Trigger: GGGGAGAAGACTGGAGCCCCATAGAGGAGAAAATAG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTGTGAGCTTGCTGCCTaGGCTTTTCTATGTACTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLCELAA*AFLCTP Trigger: TGGAGTACATAGAAAAGCTCAGGCAGCAAGCTCACA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGAGCCCCAACTGCCCTaGACGTTTCATCTCTTCATT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITEPQLP*TFHLFI Trigger: AATGAAGAGATGAAACGTTCAGGGCAGTTGGGGCTC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTTTGGAGGCATCCTCTaGGAGTTGGTCTTTACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLFGGIL*ELVFTL Trigger: GAGAGTAAAGACCAACTCTCAGAGGATGCCTCCAAA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGGCTCATTTTCAGCCTaGCTCAGAGCCTCGAGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITGSFSA*LRASSI Trigger: AATACTCGAGGCTCTGAGGCAGGCTGAAAATGAGCC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGTTTCTGTGTTCTCTTTaGTGTCTCTCACCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWFLCSL*CLSPLP Trigger: AGGAAGAGGTGAGAGACAGCAAAGAGAACACAGAAA...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTAGTTTCCCAAGCTCTTaGAACACAGACTCCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSFPSS*NTDSRV Trigger: TACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACT...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGTTGTCTTGGCTATATTaGTTGGGAAAATATGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLLSWLY*LGKYGD Trigger: GTCCCCATATTTTCCCAACCAATATAGCCAAGACAA...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAGCTGCTCTTCTTCTTaGAGGTCATCCTCTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSCSSS*RSSSEE Trigger: CTCCTCAGAGGATGACCTCCAAGAAGAAGAGCAGCT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTCCTTTTGCTCACCTTaGCCAGTCTCTCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSFCSP*PVSPFP Trigger: AGGAAATGGAGAGACTGGCCAAGGTGAGCAAAAGGA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCAGGTACTGTCTGTTTaGGGTGTCCTCATTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLQVLSV*GVLILQ Trigger: CTGAAGAATGAGGACACCCCAAACAGACAGTACCTG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCTGCTTTCTTCTCTGTaGGCTTGCTGCCTGAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGLLSSL*ACCLSF Trigger: AAAGCTCAGGCAGCAAGCTCACAGAGAAGAAAGCAG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTGAGAGCATCTTACTTTaGAACATGTCTGGACGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLESILL*NMSGRS Trigger: AGACCGTCCAGACATGTTTCAAAGTAAGATGCTCTC...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGAAATATGGGGACTTCTaGTTTACTACATTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLKYGDF*FTTFSI Trigger: GATGGAGAATGTAGTAAATCAGAAGTCCCCATATTT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGTATCTGCAAATTCCTaGAGATTTCAATCAGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLVSANS*RFQSAD Trigger: ATCAGCTGATTGAAATCTCCAGGAATTTGCAGATAC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049972.6 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACATCCTTTTGCTCACCTTaGCCAGTCTCTCCATTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSFCSP*PVSPFP Trigger: AGGAAATGGAGAGACTGGCCAAGGTGAGCAAAAGGA...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAATTCTCTTCATACATaGGAGGGAACCGCATGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITNSLHT*EGTACA Trigger: AGCACATGCGGTTCCCTCTCATGTATGAAGAGAATT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAACCTCTTCCTGGGTTTaGGTCTCTATTTTCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITTSSWV*VSIFSS Trigger: AGAGGAGAAAATAGAGACTCAAACCCAGGAAGAGGT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTTTCTGTGTTCTCTTTaGTGTCTCTCACCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLFLCSL*CLSPLP Trigger: AGGAAGAGGTGAGAGACAGCAAAGAGAACACAGAAA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGATGAGGAAAATTAAGTaGATAAGAAGCAGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RNVGGLLGGKKGNWALKLMRKIK*IRSRTA Trigger: AGCAGTTCTGCTTCTTATCCACTTAATTTTCCTCAT...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGAGCTCTCTGCCAAGTaGCTTTCTTCTCCGTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGELSAK*LSSPFS Trigger: AGAAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGAGGGTAGCAAGACTTTaGGGTGTGTATTGTTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGRVARL*GVYCSS Trigger: CGAGGAACAATACACACCCCAAAGTCTTGCTACCCT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR GCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGATTGTAGTCTGGGCTaGTTTCTTCTCTGTGAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGDCSLG*FLLCEL Trigger: AAGCTCACAGAGAAGAAAGCAGCCCAGACTACAATC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAAGCCCTGATCATTTCTaGACTAGGAAACTTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSPDHF*TRKLLD Trigger: GTCCAAAAGTTTCCTAGTCCAGAAATGATCAGGGCT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACATAGGCAATGTTGTTaGTCTTGTACACGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITHRQCC*SCTRRL Trigger: AAGACGACGTGTACAAGACCAACAACATTGCCTATG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTTGTCTTGGCTATATTaGTTGGGAAAATATGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLSWLY*LGKYGD Trigger: GTCCCCATATTTTCCCAACCAATATAGCCAAGACAA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGCTACTTTGGGAATCTaGTTGGCTCTAGATTTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGATLGI*LALDFP Trigger: TGGGAAATCTAGAGCCAACCAGATTCCCAAAGTAGC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGCTTCTCTCCAGCTTTaGGCATCTCAATTAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITASLQL*ASQLNL Trigger: AAGATTTAATTGAGATGCTCAAAGCTGGAGAGAAGC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGACTAGGAAACTTTTaGACATTCTCCAATCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGGLGNF*TFSNLR Trigger: CCTCAGATTGGAGAATGTCCAAAAGTTTCCTAGTCC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGAGCCCTGATCATTTCTaGACTAGGAAACTTTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGSPDHF*TRKLLD Trigger: GTCCAAAAGTTTCCTAGTCCAGAAATGATCAGGGCT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCATAGGCAATGTTGTTaGTCTTGTACACGTCGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGHRQCC*SCTRRL Trigger: AAGACGACGTGTACAAGACCAACAACATTGCCTATG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTTGGTTGGGAAAATATaGGGACTTCTGATTTACTAC | + |
|
Preference number: 4 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLVGKI*GLLIYY Trigger: GTAGTAAATCAGAAGTCCCCATATTTTCCCAACCAA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGCTTCTCTCCAGCTTTaGGCATCTCAATTAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGASLQL*ASQLNL Trigger: AAGATTTAATTGAGATGCTCAAAGCTGGAGAGAAGC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR TCA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGAAATATGGGGACTTCTaGTTTACTACATTCTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: RYYTVNRIEINTLKRNVGKYGDF*FTTFSI Trigger: GATGGAGAATGTAGTAAATCAGAAGTCCCCATATTT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAATGAGGAAAATTAAGTaGATAAGAAGCAGAACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SPKMTWSHLPIHHFKDITMRKIK*IRSRTA Trigger: AGCAGTTCTGCTTCTTATCCACTTAATTTTCCTCAT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | CCAGTCTCTCCATTTCCTGGGAGCTTCCTGGCCCCAGATGTTCCTTaGTGGCCTGCTCGAGCTGCTCTTCTTCTTGGAGGTCATCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PVSPFPGSFLAPDVP*WPARAALLLGGHPL Trigger: CAGAGGATGACCTCCAAGAAGAAGAGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCCAGGAAGCTCCCAGGAAATGGAGAGACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CCTTTTGCTCACCTTGGCCAGTCTCTCCATTTCCTGGGAGCTTCCTaGCCCCAGATGTTCCTTGATGGCCTGCTCGAGCTGCTCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: PFAHLGQSLHFLGAS*PQMFLDGLLELLFF Trigger: GAAGAAGAGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCCAGGAAGCTCCCAGGAAATGGAGAGACTGGCCAAGGTGAGCAAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 90 bp | TCCATTTCCTGGGAGCTTCCTGGCCCCAGATGTTCCTTGATGGCCTaGTCGAGCTGCTCTTCTTCTTGGAGGTCATCCTCTGAGGAGACT | + |
|
Preference number: 5 (lower is better) Translates to: SISWELPGPRCSLMA*SSCSSSWRSSSEET Trigger: AGTCTCCTCAGAGGATGACCTCCAAGAAGAAGAGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCCAGGAAGCTCCCAGGAAATGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 90 bp | CATGTTTTCCATGGCCCGCTTGGCAAGATGCTCCCTCCCCTGCTCTaGCTGCTCTTGGTTGAGGTACTCCAGCACTTTCAGGAGCATATC | + |
|
Preference number: 5 (lower is better) Translates to: HVFHGPLGKMLPPLL*LLLVEVLQHFQEHI Trigger: GATATGCTCCTGAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAGAGCAGGGGAGGGAGCATCTTGCCAAGCGGGCCATGGAAAACATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 90 bp | TCAGCCTCTGGGATGTCATCTAGGTCAACAGCAAGCTCCAGATCCTaGTCTGGCTCCACCAACCCATTTGGCTTCTCTCCAGCTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: SASGMSSRSTASSRS*SGSTNPFGFSPALS Trigger: GCTCAAAGCTGGAGAGAAGCCAAATGGGTTGGTGGAGCCAGAGCAGGATCTGGAGCTTGCTGTTGACCTAGATGACATCCCAGAGGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CTTCTCCAGATTCAAGGCATAGGGCTTGTTCTCTTTGGGGGCAGATaGCGGCTCATTTTCAGCCTGCCTCAGAGCCTCGAGTATTATCCG | + |
|
Preference number: 5 (lower is better) Translates to: LLQIQGIGLVLFGGR*RLIFSLPQSLEYYP Trigger: CGGATAATACTCGAGGCTCTGAGGCAGGCTGAAAATGAGCCGCCATCTGCCCCCAAAGAGAACAAGCCCTATGCCTTGAATCTGGAGAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | GTACAGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTGGTTGCTTaGCCCTGTCAGTTTCCCAAGCTCTTGGAACACAGACTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: VQLLFLVNPLTLLVA*PCQFPKLLEHRLQG Trigger: ACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | AGGCCTCTACCATACCACGACCAGGTGCCTTGGGATACCCACCCTTaGAGAGCATCTTACTTTGAAACATGTCTGGACGGTCTAGGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPLPYHDQVPWDTHP*RASYFETCLDGLGQ Trigger: CTGACCTAGACCGTCCAGACATGTTTCAAAGTAAGATGCTCTCCAAGGGTGGGTATCCCAAGGCACCTGGTCGTGGTATGGTAGAGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | TGGAGGTCATCCTCTGAGGAGACTGGACTGGGCACTCTCTTCAGCTaGTTGGTATTCAGGAGCTCAGGGTACTTAACTAGCATCCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WRSSSEETGLGTLFS*LVFRSSGYLTSILA Trigger: AGCCAGGATGCTAGTTAAGTACCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGTGCCCAGTCCAGTCTCCTCAGAGGATGACCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 90 bp | CTGTGTACAGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTGGTTaGTTGGCCCTGTCAGTTTCCCAAGCTCTTGGAACACAGACTCCA | + |
|
Preference number: 5 (lower is better) Translates to: LCTAFVPRQPSHASG*LALSVSQALGTQTP Trigger: TGGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTACACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CTCTCACGCTTCTGGTTGCTTGGCCCTGTCAGTTTCCCAAGCTCTTaGAACACAGACTCCAGGGTAGCAAGACTTTGGGGTGTGTATTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSRFWLLGPVSFPSS*NTDSRVARLWGVYC Trigger: ACAATACACACCCCAAAGTCTTGCTACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | TCATCTGTGTACAGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTaGTTGCTTGGCCCTGTCAGTTTCCCAAGCTCTTGGAACACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SSVYSFCSSSTLSRF*LLGPVSFPSSWNTD Trigger: GTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTACACAGATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CCTCTCAGGCCACTGTTGAGTCTCATAGTCATCAGGCGTGTCCACTaGGAAGTTCTTCTCCAGATTCAAGGCATAGGGCTTGTTCTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PLRPLLSLIVIRRVH*EVLLQIQGIGLVLF Trigger: AAAGAGAACAAGCCCTATGCCTTGAATCTGGAGAAGAACTTCCCAGTGGACACGCCTGATGACTATGAGACTCAACAGTGGCCTGAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CTCCAGCACTTTCAGGAGCATATCTTCATCCAGGTACTGTCTGTTTaGGGTGTCCTCATTCTTCAGGGATCCTACGGGGATCCTTTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LQHFQEHIFIQVLSV*GVLILQGSYGDPFA Trigger: AGCAAAAGGATCCCCGTAGGATCCCTGAAGAATGAGGACACCCCAAACAGACAGTACCTGGATGAAGATATGCTCCTGAAAGTGCTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGCTGCTCTGCCTGCTCTaGGTTGAGGTACTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWLLCLL*VEVLQH Trigger: GTGCTGGAGTACCTCAACCAAGAGCAGGCAGAGCAG...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | CATCCCTTGAGCTCTCTGCCAAGTGGCTTTCTTCTCCGTTTTCTTTaGGTTGAAGAGGAACAGAGACGCCTTGGTAGGGATTGTAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: HPLSSLPSGFLLRFL*VEEEQRRLGRDCSL Trigger: CAGACTACAATCCCTACCAAGGCGTCTCTGTTCCTCTTCAACTCAAAGAAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTCAAGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | CTCGAGTATTATCCGCATCCACTCGTCTTCACTCAGTGCATCCCTTaGGCTCTCTGCCAAGTGGCTTTCTTCTCCGTTTTCTTTGAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: LEYYPHPLVFTQCIP*ALCQVAFFSVFFEL Trigger: CAACTCAAAGAAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGTGAAGACGAGTGGATGCGGATAATACTCGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | GATCCTGCTCTGGCTCCACCAACCCATTTGGCTTCTCTCCAGCTTTaGGCATCTCAATTAAATCTTCAGGGGGTATCTGCAAATTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: DPALAPPTHLASLQL*ASQLNLQGVSANSW Trigger: CCAGGAATTTGCAGATACCCCCTGAAGATTTAATTGAGATGCTCAAAGCTGGAGAGAAGCCAAATGGGTTGGTGGAGCCAGAGCAGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049972.6 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGGGATCCAGGCTACTTaGGGAATCTGGTTGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RNVGGLLGGKKGNWALKLGIQAT*GIWLAL Trigger: TAGAGCCAACCAGATTCCCAAAGTAGCCTGGATCCC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGTCTGCCTGCTCTTGGTaGAGGTACTCCAGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: RNVGGLLGGKKGNWALKLSACSW*RYSSTF Trigger: GAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAGA...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | GATCCTGCTCTGGCTCCACCAACCCATTTGGCTTCTCTCCAGCTTTaGGCATCTCAATTAAATCTTCAGGGGGTATCTGCAAATTCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DPALAPPTHLASLQL*ASQLNLQGVSANSF Trigger: GAAGGAATTTGCAGATACCCCCTGAAGATTTAATTGAGATGCTCAAAGCTGGAGAGAAGCCAAATGGGTTGGTGGAGCCAGAGCAGGATC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | TTTGAGTTGAAGAGGAACAGAGACGCCTTGGTAGGGATTGTAGTCTaGGCTGCTTTCTTCTCTGTGAGCTTGCTGCCTGAGCTTTTCTAT | + |
|
Preference number: 5 (lower is better) Translates to: FELKRNRDALVGIVV*AAFFSVSLLPELFY Trigger: ATAGAAAAGCTCAGGCAGCAAGCTCACAGAGAAGAAAGCAGCCCAGACTACAATCCCTACCAAGGCGTCTCTGTTCCTCTTCAACTCAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGCAGGGTAGCAAGACTTaGGGGTGTGTATTGTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: RNVGGLLGGKKGNWALKLQGSKT*GCVLFL Trigger: GAGGAACAATACACACCCCAAAGTCTTGCTACCCTG...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCTGCCCTGTCCCCATTaGGCCCACTCTGTGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGLPCPH*AHSVTS Trigger: GGAGGTCACAGAGTGGGCCAAATGGGGACAGGGCAG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049972.6 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGACTCTCTTCAGCTGGTaGGTATTCAGGAGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWTLFSW*VFRSSG Trigger: CCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGT...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCCCCAGATGTTCCTaGATGGCCTGCTCGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGGPRCS*MACSSC Trigger: GCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 90 bp | CTGCAAATTCCTTCTCAGGTAGGTGATAACTTTGGAGGCATCCTCTaGGAGTTGGTCTTTACTCTCTCTCCGGTTTTCTTCATCTGGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LQIPSQVGDNFGGIL*ELVFTLSPVFFIWE Trigger: CTCCCAGATGAAGAAAACCGGAGAGAGAGTAAAGACCAACTCTCAGAGGATGCCTCCAAAGTTATCACCTACCTGAGAAGGAATTTGCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | CATTTCTGGACTAGGAAACTTTTGGACATTCTCCAATCTGAGGTCTaGTTCTTTCTGAAGCAGCTGGTTTCGCTGGAAGGAAGCTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: HFWTRKLLDILQSEV*FFLKQLVSLEGSCF Trigger: GAAGCAGCTTCCTTCCAGCGAAACCAGCTGCTTCAGAAAGAACCAGACCTCAGATTGGAGAATGTCCAAAAGTTTCCTAGTCCAGAAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACACTCAGTGCATCCCTaGAGCTCTCTGCCAAGTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITHSVHP*SSLPSG Trigger: GCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGTG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCTCTCACGCTTCTGGTaGCTTGGCCCTGTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLLSRFW*LGPVSF Trigger: GAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGCCAGGTACTGTCTGTTaGGGGTGTCCTCATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWPGTVC*GCPHSS Trigger: TGAAGAATGAGGACACCCCAAACAGACAGTACCTGG...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 90 bp | AGTTTCCCAAGCTCTTGGAACACAGACTCCAGGGTAGCAAGACTTTaGGGTGTGTATTGTTCCTCGACTATTTCATTTGTGCGTTTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: SFPSSWNTDSRVARL*GVYCSSTISFVRLK Trigger: CTTCAAACGCACAAATGAAATAGTCGAGGAACAATACACACCCCAAAGTCTTGCTACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGTCCGTTTTCTTTGAGTaGAAGAGGAACAGAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWSVFFE*KRNRDA Trigger: GGCGTCTCTGTTCCTCTTCAACTCAAAGAAAACGGA...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCAGTTTCCCAAGCTCTaGGAACACAGACTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLQFPKL*EHRLQG Trigger: ACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACTCTCACGCTTCTGGTaGCTTGGCCCTGTCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITLSRFW*LGPVSF Trigger: GAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGGCAATGTTGTTGGTCTaGTACACGTCGTCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: RNVGGLLGGKKGNWALKLAMLLV*YTSSSS Trigger: TGATGAAGACGACGTGTACAAGACCAACAACATTGC...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGGAGAGCATCTTACTTaGAAACATGTCTGGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWGEHLT*KHVWTV Trigger: GACCGTCCAGACATGTTTCAAAGTAAGATGCTCTCC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGAGCCTCATCAGAGCCTaGTCTTGGCTATATTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWSLIRA*SWLYWL Trigger: CAACCAATATAGCCAAGACAAGGCTCTGATGAGGCT...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTCTGCCTGCTCTTGGTaGAGGTACTCCAGCACTTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSACSW*RYSSTF Trigger: GAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAGA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCTGCTCTGCCTGCTCTaGGTTGAGGTACTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGLLCLL*VEVLQH Trigger: GTGCTGGAGTACCTCAACCAAGAGCAGGCAGAGCAG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 90 bp | ACTCTCCCAATTCTTGGTCATTCAGATTTTCATAAGGTGCTTGTCTaGTTTCAACATCAGGGATCCAGGCTACTTTGGGAATCTGGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TLPILGHSDFHKVLV*FQHQGSRLLWESGW Trigger: CCAACCAGATTCCCAAAGTAGCCTGGATCCCTGATGTTGAAAGCAGACAAGCACCTTATGAAAATCTGAATGACCAAGAATTGGGAGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGCATTAAAGCTGTGGACTAGGAAACTTTaGGACATTCTCCAATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RNVGGLLGGKKGNWALKLWTRKL*DILQSE Trigger: CTCAGATTGGAGAATGTCCAAAAGTTTCCTAGTCCA...CAGCTTTAATGCCCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGCATCAGAGCCTTGTCTaGGCTATATTGGTTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWHQSLV*AILVGK Trigger: TTTCCCAACCAATATAGCCAAGACAAGGCTCTGATG...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGGGATCCAGGCTACTTaGGGAATCTGGTTGGCTCTA | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITGIQAT*GIWLAL Trigger: TAGAGCCAACCAGATTCCCAAAGTAGCCTGGATCCC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCCAGGTACTGTCTGTTaGGGGTGTCCTCATTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLPGTVC*GCPHSS Trigger: TGAAGAATGAGGACACCCCAAACAGACAGTACCTGG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGCAGTTTCCCAAGCTCTaGGAACACAGACTCCAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGQFPKL*EHRLQG Trigger: ACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTG...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTCACCTCTTCCTGGGTTaGAGTCTCTATTTTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLHLFLG*SLYFLL Trigger: GAGGAGAAAATAGAGACTCAAACCCAGGAAGAGGTG...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTAGCCTCATCAGAGCCTaGTCTTGGCTATATTGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSLIRA*SWLYWL Trigger: CAACCAATATAGCCAAGACAAGGCTCTGATGAGGCT...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGACTCTCTTCAGCTGGTaGGTATTCAGGAGCTCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGTLFSW*VFRSSG Trigger: CCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAATCCTTTTGCTCACCTaGGCCAGTCTCTCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITILLLT*ASLSIS Trigger: GGAAATGGAGAGACTGGCCAAGGTGAGCAAAAGGAT...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACATCCGTTTTCTTTGAGTaGAAGAGGAACAGAGACGCC | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSVFFE*KRNRDA Trigger: GGCGTCTCTGTTCCTCTTCAACTCAAAGAAAACGGA...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGATCCTTTTGCTCACCTaGGCCAGTCTCTCCATTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGILLLT*ASLSIS Trigger: GGAAATGGAGAGACTGGCCAAGGTGAGCAAAAGGAT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGCAATGTTGTTGGTCTaGTACACGTCGTCTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITAMLLV*YTSSSS Trigger: TGATGAAGACGACGTGTACAAGACCAACAACATTGC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGAGAGCATCTTACTTaGAAACATGTCTGGACGGTC | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGGEHLT*KHVWTV Trigger: GACCGTCCAGACATGTTTCAAAGTAAGATGCTCTCC...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | ACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGGGCTTACTTTCTTGGCTATATTGGTaGGGAAAATATGGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: TVNRIEINTLKRNVGGLLSWLYW*GKYGDF Trigger: GAAGTCCCCATATTTTCCCAACCAATATAGCCAAGA...AAGTAAGCCCCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACACATCAGAGCCTTGTCTaGGCTATATTGGTTGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITHQSLV*AILVGK Trigger: TTTCCCAACCAATATAGCCAAGACAAGGCTCTGATG...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGACTTTGGGAATCTGGTaGGCTCTAGATTTCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGTLGIW*ALDFPG Trigger: TCCTGGGAAATCTAGAGCCAACCAGATTCCCAAAGT...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AACACACTTAAGAGAAATGTAGGGGGCTTACTTGGGGGAAAGAAGGGAAATTGGGTACTCTCCCAATTCTaGGTCATTCAGATTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: NTLKRNVGGLLGGKKGNWVLSQF*VIQIFI Trigger: TATGAAAATCTGAATGACCAAGAATTGGGAGAGTAC...CCAATTTCCCTTCTTTCCCCCAAGTAAGCCCCCTACATTTCTCTTAAGTGTGTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACATCTTGGCTATATTGGTaGGGAAAATATGGGGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITSWLYW*GKYGDF Trigger: GAAGTCCCCATATTTTCCCAACCAATATAGCCAAGA...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | AGATATTACACTGTCAACAGGATAGAGATCAACACACTTAAGAGAAATGTAGGGTGGACTAGGAAACTTTaGGACATTCTCCAATCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RYYTVNRIEINTLKRNVGWTRKL*DILQSE Trigger: CTCAGATTGGAGAATGTCCAAAAGTTTCCTAGTCCA...CCCTACATTTCTCTTAAGTGTGTTGATCTCTATCCTGTTGACAGTGTAATATCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS-3UTR CAA 90 bp | TCCCCCAAAATGACCTGGAGTCATCTGCCTATACATCACTTTAAAGATATTACAGTACTCTCCCAATTCTaGGTCATTCAGATTTTCATA | + |
|
Preference number: 5 (lower is better) Translates to: SPKMTWSHLPIHHFKDITVLSQF*VIQIFI Trigger: TATGAAAATCTGAATGACCAAGAATTGGGAGAGTAC...TGTAATATCTTTAAAGTGATGTATAGGCAGATGACTCCAGGTCATTTTGGGGGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | CATGGCCCGCTTGGCAAGATGCTCCCTCCCCTGCTCTaGCTGCTCTTGGTTGAGGTACTCCAGCACTTTCAG | + |
|
Preference number: 6 (lower is better) Translates to: HGPLGKMLPPLL*LLLVEVLQHFQ Trigger: CTGAAAGTGCTGGAGTACCTCAACCAAGAGCAGGCAGAGCAGGGGAGGGAGCATCTTGCCAAGCGGGCCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 72 bp | CACCTTGGCCAGTCTCTCCATTTCCTGGGAGCTTCCTaGCCCCAGATGTTCCTTGATGGCCTGCTCGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLGQSLHFLGAS*PQMFLDGLLEL Trigger: CAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCCAGGAAGCTCCCAGGAAATGGAGAGACTGGCCAAGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | CCTGGCCCCAGATGTTCCTTGATGGCCTGCTCGAGCTaGTCTTCTTCTTGGAGGTCATCCTCTGAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: PGPRCSLMACSS*SSSWRSSSEET Trigger: AGTCTCCTCAGAGGATGACCTCCAAGAAGAAGAGCAGCTCGAGCAGGCCATCAAGGAACATCTGGGGCCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | TTCTCTTTGGGGGCAGATGGCGGCTCATTTTCAGCCTaGCTCAGAGCCTCGAGTATTATCCGCATCCACTCG | + |
|
Preference number: 6 (lower is better) Translates to: FSLGADGGSFSA*LRASSIIRIHS Trigger: CGAGTGGATGCGGATAATACTCGAGGCTCTGAGGCAGGCTGAAAATGAGCCGCCATCTGCCCCCAAAGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 72 bp | ATTCAAGGCATAGGGCTTGTTCTCTTTGGGGGCAGATaGCGGCTCATTTTCAGCCTGCCTCAGAGCCTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: IQGIGLVLFGGR*RLIFSLPQSLE Trigger: CTCGAGGCTCTGAGGCAGGCTGAAAATGAGCCGCCATCTGCCCCCAAAGAGAACAAGCCCTATGCCTTGAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | GGGATGTCATCTAGGTCAACAGCAAGCTCCAGATCCTaGTCTGGCTCCACCAACCCATTTGGCTTCTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GMSSRSTASSRS*SGSTNPFGFSP Trigger: TGGAGAGAAGCCAAATGGGTTGGTGGAGCCAGAGCAGGATCTGGAGCTTGCTGTTGACCTAGATGACATCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 72 bp | CTTCTGGTTGCTTGGCCCTGTCAGTTTCCCAAGCTCTaGGAACACAGACTCCAGGGTAGCAAGACTTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLVAWPCQFPKL*EHRLQGSKTLG Trigger: CCCCAAAGTCTTGCTACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 90 bp | CCTCTCACGCTTCTGGTTGCTTGGCCCTGTCAGTTTCCCAAGCTCTaGGAACACAGACTCCAGGGTAGCAAGACTTTGGGGTGTGTATTG | + |
|
Preference number: 6 (lower is better) Translates to: PLTLLVAWPCQFPKL*EHRLQGSKTLGCVL Trigger: CAATACACACCCCAAAGTCTTGCTACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | GCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTGGTTaGTTGGCCCTGTCAGTTTCCCAAGCTCTTGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: AFVPRQPSHASG*LALSVSQALGT Trigger: TGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CCA 72 bp | TACAGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTaGTTGCTTGGCCCTGTCAGTTTCCCAAGCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: YSFCSSSTLSRF*LLGPVSFPSSW Trigger: CCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CCA 72 bp | CCATACCACGACCAGGTGCCTTGGGATACCCACCCTTaGAGAGCATCTTACTTTGAAACATGTCTGGACGGT | + |
|
Preference number: 6 (lower is better) Translates to: PYHDQVPWDTHP*RASYFETCLDG Trigger: ACCGTCCAGACATGTTTCAAAGTAAGATGCTCTCCAAGGGTGGGTATCCCAAGGCACCTGGTCGTGGTATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CCA 72 bp | TCCTCTGAGGAGACTGGACTGGGCACTCTCTTCAGCTaGTTGGTATTCAGGAGCTCAGGGTACTTAACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: SSEETGLGTLFS*LVFRSSGYLTS Trigger: GCTAGTTAAGTACCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGTGCCCAGTCCAGTCTCCTCAGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CCA 72 bp | CTTCTTCTTGGAGGTCATCCTCTGAGGAGACTGGACTaGGCACTCTCTTCAGCTGGTTGGTATTCAGGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLLGGHPLRRLD*ALSSAGWYSGA Trigger: AGCTCCTGAATACCAACCAGCTGAAGAGAGTGCCCAGTCCAGTCTCCTCAGAGGATGACCTCCAAGAAGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | GAACCGCATGTGCTTGAGTTTCCTCTCAGGCCACTGTaGAGTCTCATAGTCATCAGGCGTGTCCACTGGGAA | + |
|
Preference number: 6 (lower is better) Translates to: EPHVLEFPLRPL*SLIVIRRVHWE Trigger: TTCCCAGTGGACACGCCTGATGACTATGAGACTCAACAGTGGCCTGAGAGGAAACTCAAGCACATGCGGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | AGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTGGTaGCTTGGCCCTGTCAGTTTCCCAAGCTCTTGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SFCSSSTLSRFW*LGPVSFPSSWN Trigger: GTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 90 bp | TCTGTGTACAGCTTTTGTTCCTCGTCAACCCTCTCACGCTTCTGGTaGCTTGGCCCTGTCAGTTTCCCAAGCTCTTGGAACACAGACTCC | + |
|
Preference number: 6 (lower is better) Translates to: SVYSFCSSSTLSRFW*LGPVSFPSSWNTDS Trigger: GGAGTCTGTGTTCCAAGAGCTTGGGAAACTGACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTACACAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 90 bp | AGGTCATCCTCTGAGGAGACTGGACTGGGCACTCTCTTCAGCTGGTaGGTATTCAGGAGCTCAGGGTACTTAACTAGCATCCTGGCTAAG | + |
|
Preference number: 6 (lower is better) Translates to: RSSSEETGLGTLFSW*VFRSSGYLTSILAK Trigger: CTTAGCCAGGATGCTAGTTAAGTACCCTGAGCTCCTGAATACCAACCAGCTGAAGAGAGTGCCCAGTCCAGTCTCCTCAGAGGATGACCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS TCA 72 bp | TATCCGCATCCACTCGTCTTCACTCAGTGCATCCCTTaGGCTCTCTGCCAAGTGGCTTTCTTCTCCGTTTTC | + |
|
Preference number: 6 (lower is better) Translates to: YPHPLVFTQCIP*ALCQVAFFSVF Trigger: GAAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGTGAAGACGAGTGGATGCGGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 90 bp | GTTGTTGGTCTTGTACACGTCGTCTTCATCATCTGTGTACAGCTTTaGTTCCTCGTCAACCCTCTCACGCTTCTGGTTGCTTGGCCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: VVGLVHVVFIICVQL*FLVNPLTLLVAWPC Trigger: ACAGGGCCAAGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTACACAGATGATGAAGACGACGTGTACAAGACCAACAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CCA 72 bp | CCACTGTTGAGTCTCATAGTCATCAGGCGTGTCCACTaGGAAGTTCTTCTCCAGATTCAAGGCATAGGGCTT | + |
|
Preference number: 6 (lower is better) Translates to: PLLSLIVIRRVH*EVLLQIQGIGL Trigger: AAGCCCTATGCCTTGAATCTGGAGAAGAACTTCCCAGTGGACACGCCTGATGACTATGAGACTCAACAGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | TTATCCGCATCCACTCGTCTTCACTCAGTGCATCCCTaGAGCTCTCTGCCAAGTGGCTTTCTTCTCCGTTTT | + |
|
Preference number: 6 (lower is better) Translates to: LSASTRLHSVHP*SSLPSGFLLRF Trigger: AAAACGGAGAAGAAAGCCACTTGGCAGAGAGCTCAAGGGATGCACTGAGTGAAGACGAGTGGATGCGGATAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | GCTTGTCTGCTTTCAACATCAGGGATCCAGGCTACTTaGGGAATCTGGTTGGCTCTAGATTTCCCAGGACCA | + |
|
Preference number: 6 (lower is better) Translates to: ACLLSTSGIQAT*GIWLALDFPGP Trigger: TGGTCCTGGGAAATCTAGAGCCAACCAGATTCCCAAAGTAGCCTGGATCCCTGATGTTGAAAGCAGACAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 72 bp | CTTTCAGGAGCATATCTTCATCCAGGTACTGTCTGTTaGGGGTGTCCTCATTCTTCAGGGATCCTACGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: LSGAYLHPGTVC*GCPHSSGILRG Trigger: TCCCCGTAGGATCCCTGAAGAATGAGGACACCCCAAACAGACAGTACCTGGATGAAGATATGCTCCTGAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 90 bp | GCCTTGGTAGGGATTGTAGTCTGGGCTGCTTTCTTCTCTGTGAGCTaGCTGCCTGAGCTTTTCTATGTACTCCAAAGCCCTGATCATTTC | + |
|
Preference number: 6 (lower is better) Translates to: ALVGIVVWAAFFSVS*LPELFYVLQSPDHF Trigger: GAAATGATCAGGGCTTTGGAGTACATAGAAAAGCTCAGGCAGCAAGCTCACAGAGAAGAAAGCAGCCCAGACTACAATCCCTACCAAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS TCA 72 bp | CTGGCTCCACCAACCCATTTGGCTTCTCTCCAGCTTTaGGCATCTCAATTAAATCTTCAGGGGGTATCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LAPPTHLASLQL*ASQLNLQGVSA Trigger: TGCAGATACCCCCTGAAGATTTAATTGAGATGCTCAAAGCTGGAGAGAAGCCAAATGGGTTGGTGGAGCCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 72 bp | CTTGTACACGTCGTCTTCATCATCTGTGTACAGCTTTaGTTCCTCGTCAACCCTCTCACGCTTCTGGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVHVVFIICVQL*FLVNPLTLLVA Trigger: AGCAACCAGAAGCGTGAGAGGGTTGACGAGGAACAAAAGCTGTACACAGATGATGAAGACGACGTGTACAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | CTCTCTCTCCGGTTTTCTTCATCTGGGAGCCCCAACTaGCCTGAACGTTTCATCTCTTCATTGATTTGTTCA | + |
|
Preference number: 6 (lower is better) Translates to: LSLRFSSSGSPN*PERFISSLICS Trigger: TGAACAAATCAATGAAGAGATGAAACGTTCAGGGCAGTTGGGGCTCCCAGATGAAGAAAACCGGAGAGAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 90 bp | CAGTTTCCCAAGCTCTTGGAACACAGACTCCAGGGTAGCAAGACTTaGGGGTGTGTATTGTTCCTCGACTATTTCATTTGTGCGTTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: QFPKLLEHRLQGSKT*GCVLFLDYFICAFE Trigger: TTCAAACGCACAAATGAAATAGTCGAGGAACAATACACACCCCAAAGTCTTGCTACCCTGGAGTCTGTGTTCCAAGAGCTTGGGAAACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 90 bp | CCCAGGACCATAAGGGAGCCTCATCAGAGCCTTGTCTTGGCTATATaGGTTGGGAAAATATGGGGACTTCTGATTTACTACATTCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: PRTIREPHQSLVLAI*VGKIWGLLIYYILH Trigger: ATGGAGAATGTAGTAAATCAGAAGTCCCCATATTTTCCCAACCAATATAGCCAAGACAAGGCTCTGATGAGGCTCCCTTATGGTCCTGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 72 bp | ACTAGGAAACTTTTGGACATTCTCCAATCTGAGGTCTaGTTCTTTCTGAAGCAGCTGGTTTCGCTGGAAGGA | + |
|
Preference number: 6 (lower is better) Translates to: TRKLLDILQSEV*FFLKQLVSLEG Trigger: TCCTTCCAGCGAAACCAGCTGCTTCAGAAAGAACCAGACCTCAGATTGGAGAATGTCCAAAAGTTTCCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CAA 90 bp | TCTAGATTTCCCAGGACCATAAGGGAGCCTCATCAGAGCCTTGTCTaGGCTATATTGGTTGGGAAAATATGGGGACTTCTGATTTACTAC | + |
|
Preference number: 6 (lower is better) Translates to: SRFPRTIREPHQSLV*AILVGKIWGLLIYY Trigger: GTAGTAAATCAGAAGTCCCCATATTTTCCCAACCAATATAGCCAAGACAAGGCTCTGATGAGGCTCCCTTATGGTCCTGGGAAATCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS GCA 72 bp | CTCTCCCAATTCTTGGTCATTCAGATTTTCATAAGGTaGTTGTCTGCTTTCAACATCAGGGATCCAGGCTAC | + |
|
Preference number: 6 (lower is better) Translates to: LSQFLVIQIFIR*LSAFNIRDPGY Trigger: GTAGCCTGGATCCCTGATGTTGAAAGCAGACAAGCACCTTATGAAAATCTGAATGACCAAGAATTGGGAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
||
| CDS CCA 72 bp | GGAGCCTCATCAGAGCCTTGTCTTGGCTATATTGGTTaGGAAAATATGGGGACTTCTGATTTACTACATTCT | + |
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Preference number: 6 (lower is better) Translates to: GASSEPCLGYIG*ENMGTSDLLHS Trigger: AGAATGTAGTAAATCAGAAGTCCCCATATTTTCCCAACCAATATAGCCAAGACAAGGCTCTGATGAGGCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | ATAAGGGAGCCTCATCAGAGCCTTGTCTTGGCTATATaGGTTGGGAAAATATGGGGACTTCTGATTTACTAC | + |
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Preference number: 6 (lower is better) Translates to: IREPHQSLVLAI*VGKIWGLLIYY Trigger: GTAGTAAATCAGAAGTCCCCATATTTTCCCAACCAATATAGCCAAGACAAGGCTCTGATGAGGCTCCCTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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| CDS CAA 72 bp | TCCCAATTCTTGGTCATTCAGATTTTCATAAGGTGCTaGTCTGCTTTCAACATCAGGGATCCAGGCTACTTT | + |
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Preference number: 6 (lower is better) Translates to: SQFLVIQIFIRC*SAFNIRDPGYF Trigger: AAAGTAGCCTGGATCCCTGATGTTGAAAGCAGACAAGCACCTTATGAAAATCTGAATGACCAAGAATTGGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049972.6 ENSMUST00000185234.2 |
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