Pregenerated sensors for SCFD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000062110Ensembl transcript IDs: ENSMUST00000072857.13, ENSMUST00000075848.13, ENSMUST00000113542.9, ENSMUST00000148994.3, ENSMUST00000151474.3
Found 340 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTGTCCCTCCCACTGCTGTTCCAAGTAGCGGGCTGCCCCAGTCCTTaGACCAGCTGGAACAAAGCAGCCCTTTGTCACTCGTGGGGTGAT | + |
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Preference number: 1 (lower is better) Translates to: LSLPLLFQVAGCPSP*TSWNKAALCHSWGD Trigger: ATCACCCCACGAGTGACAAAGGGCTGCTTTGTTCCAGCTGGTTCAAGGACTGGGGCAGCCCGCTACTTGGAACAGCAGTGGGAGGGACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR TCA 90 bp | GGCTCAGCAGCTGAGTGCACTGGCGACTCGCACATGACCTGGGTGTaGTCCCCAGCACCAACACAATGGCTCACAAATGTGTGCAACTTC | + |
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Preference number: 1 (lower is better) Translates to: GSAAECTGDSHMTWV*SPAPTQWLTNVCNF Trigger: GAAGTTGCACACATTTGTGAGCCATTGTGTTGGTGCTGGGGATCACACCCAGGTCATGTGCGAGTCGCCAGTGCACTCAGCTGCTGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR TCA 90 bp | GTAGCTTTGTATTCCAGAGCCTGGGCTGAGGTTTTCAGAAGACTGTaGGTCAGAGCAGTAGACAGAGTGGGTGCCATGTGCCACTTTTCC | + |
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Preference number: 1 (lower is better) Translates to: VALYSRAWAEVFRRL*VRAVDRVGAMCHFS Trigger: GGAAAAGTGGCACATGGCACCCACTCTGTCTACTGCTCTGACTCACAGTCTTCTGAAAACCTCAGCCCAGGCTCTGGAATACAAAGCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR TCA 90 bp | CCAAGTGCGTATAAAAGTCTAGATGCGGCTGTCCCAGGCATAAGCTaGGGGAGATCAGTGAAGAGAGAACTCAAGCTCAGCAGCCATTGT | + |
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Preference number: 1 (lower is better) Translates to: PSAYKSLDAAVPGIS*GRSVKRELKLSSHC Trigger: ACAATGGCTGCTGAGCTTGAGTTCTCTCTTCACTGATCTCCCTCAGCTTATGCCTGGGACAGCCGCATCTAGACTTTTATACGCACTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR TCA 90 bp | ACACATGGTGGATGGTTCCTACTAACGGAGTGCTTGCTACCTACCTaGAGTGTGCCTATAGTTTCCTTCAGTACCAAAGCATCACAAGAC | + |
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Preference number: 1 (lower is better) Translates to: THGGWFLLTECLLPT*SVPIVSFSTKASQD Trigger: GTCTTGTGATGCTTTGGTACTGAAGGAAACTATAGGCACACTTCAGGTAGGTAGCAAGCACTCCGTTAGTAGGAACCATCCACCATGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR TCA 90 bp | GAAGGCAAAGAAGGACTTGGGCATGAACAAGAACATCTGGTCTCATaGAACTCAGCTTCAGCATGTGAAAGTGACTCCAAGTTCAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: EGKEGLGHEQEHLVS*NSASACESDSKFSF Trigger: AAAGCTGAACTTGGAGTCACTTTCACATGCTGAAGCTGAGTTTCATGAGACCAGATGTTCTTGTTCATGCCCAAGTCCTTCTTTGCCTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CCA 90 bp | CTTGCCAACAGGCTTTTATCTAGAGCTAGAACTTCCAGGGATCTCTaGGAAGAGTACAATAAGTGGCTAAGGGTAAATGAACATGACAGC | + |
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Preference number: 1 (lower is better) Translates to: LANRLLSRARTSRDL*EEYNKWLRVNEHDS Trigger: GCTGTCATGTTCATTTACCCTTAGCCACTTATTGTACTCTTCCCAGAGATCCCTGGAAGTTCTAGCTCTAGATAAAAGCCTGTTGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR TCA 90 bp | TTGACACCTTTAGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTaGAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAT | + |
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Preference number: 1 (lower is better) Translates to: LTPLEERECKSLFCC*RPSPVQTNCLPCSH Trigger: ATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAAGGTGTCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAAGCGCAGGGGTCACAGTaGAGGAGGCCCAGCGGCAGT | + |
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Preference number: 2 (lower is better) Translates to: SRGSNTLFWTPWENVCKQAQGSQ*RRPSGS Trigger: ACTGCCGCTGGGCCTCCTCCACTGTGACCCCTGCGC...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR CAA 90 bp | AGGAGATCTCTTCTACACGGGCTTCCTCTGCACAGGATGAAACCATaGCTAGCAAAGACAGCTCTCCAGTCACCCTGCTTTGTCCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: RRSLLHGLPLHRMKP*LAKTALQSPCFVPP Trigger: GGGAGGGACAAAGCAGGGTGACTGGAGAGCTGTCTTTGCTAGCAATGGTTTCATCCTGTGCAGAGGAAGCCCGTGTAGAAGAGATCTCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR TCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCACAACTGGGGTCAGAGTaGAAAAGGCTCAGCAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPQLGSE*KRLSSS Trigger: GCTGCTGCTGAGCCTTTTTCACTCTGACCCCAGTTG...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAATTCCAGAGCCTGGGCTaGGGTTTTCAGAAGACTGTG | + |
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Preference number: 2 (lower is better) Translates to: SRGSNTLFWTPWENVCKQFQSLG*GFQKTV Trigger: CACAGTCTTCTGAAAACCTCAGCCCAGGCTCTGGAA...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAAGAGAGGGAGCCCAGTaGCTTAGAGCTAGTAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPREGAQ*LRASSY Trigger: ATAACTACTAGCTCTAAGCCACTGGGCTCCCTCTCT...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR TCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTAGTCCCAGGCATAAGCTaGGGGAGATCAGTGAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KALFSLYEADIQRQPKCVVPGIS*GRSVKR Trigger: TCTCTTCACTGATCTCCCTCAGCTTATGCCTGGGAC...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR-3UTR CCA 90 bp | AAACCCCCTGGAGATGTGCCGAGCCAAAGTAAAAACTCCAAAGCCTTAGCAGATAGAGAGGGAGCCCAGTaGCTTAGAGCTAGTAGTTAT | + |
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Preference number: 2 (lower is better) Translates to: KPPGDVPSQSKNSKALADREGAQ*LRASSY Trigger: ATAACTACTAGCTCTAAGCCACTGGGCTCCCTCTCT...ATCTGCTAAGGCTTTGGAGTTTTTACTTTGGCTCGGCACATCTCCAGGGGGTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCATTGTATTCCAGAGCCTaGGCTGAGGTTTTCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPLYSRA*AEVFRR Trigger: TCTTCTGAAAACCTCAGCCCAGGCTCTGGAATACAA...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR CAA 90 bp | TTACAGTTCAGCACCATCAGAGAATCGGTGAAGGCAAAGAAGGACTaGGGCATGAACAAGAACATCTGGTCTCATGAAACTCAGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: LQFSTIRESVKAKKD*GMNKNIWSHETQLQ Trigger: CTGAAGCTGAGTTTCATGAGACCAGATGTTCTTGTTCATGCCCAAGTCCTTCTTTGCCTTCACCGATTCTCTGATGGTGCTGAACTGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR GCA 90 bp | ACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCTCTCTTTCCACAACGCTCATATCTaGCACCACTTGCCAACAGGC | + |
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Preference number: 2 (lower is better) Translates to: TGHTWMSNQFVFLFFLSFHNAHI*HHLPTG Trigger: GCCTGTTGGCAAGTGGTGGCAGATATGAGCGTTGTG...GAAAGAGAGAAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAATTTAAAACACTGCTGTaGACTCTGGGGATGAGAAGG | + |
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Preference number: 2 (lower is better) Translates to: SRGSNTLFWTPWENVCKQFKTLL*TLGMRR Trigger: CCTTCTCATCCCCAGAGTCCACAGCAGTGTTTTAAA...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR CAA 90 bp | CGACAGCTTGACACCTTTAGAAGAACGAGAATGCAAGTCTTTATTTaGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: RQLDTFRRTRMQVFI*LLKTQSSPNKLPSM Trigger: CATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAAGGTGTCAAGCTGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR TCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAACGGCAGTGGTATAAATaGGACCATAAAGAAGTAACC | + |
|
Preference number: 2 (lower is better) Translates to: SRGSNTLFWTPWENVCKQRQWYK*DHKEVT Trigger: GGTTACTTCTTTATGGTCTCATTTATACCACTGCCG...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR TCA 90 bp | TATTTAGTAGGCTTTGTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCGCTGAGGGAGATCAGTaGAGAGAGAACTCAAGCTCA | + |
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Preference number: 2 (lower is better) Translates to: YLVGFVQKALFSLYEADIAEGDQ*RENSSS Trigger: TGAGCTTGAGTTCTCTCTTCACTGATCTCCCTCAGC...GATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCACAAAGCCTACTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR-3UTR TCA 90 bp | TCTCCCCAGAGTTCTCATATAATTTCACTAGGTGCATCTGGGTTTTTCTGCTCTTCTTTATTTTGCTGTTaGAGACCCAGTCCAGTCCAA | + |
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Preference number: 2 (lower is better) Translates to: SPQSSHIISLGASGFFCSSLFCC*RPSPVQ Trigger: TTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGA...AGAGCAGAAAAACCCAGATGCACCTAGTGAAATTATATGAGAACTCTGGGGAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR CCA 90 bp | GGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGCTGGGAACTTCCAGGGATCTCTaGGAAGAGTACAATAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: GNYSSAFSHFRHSLLRLGTSRDL*EEYNKW Trigger: CCACTTATTGTACTCTTCCCAGAGATCCCTGGAAGT...TCCCAGCCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR TCA 90 bp | TTCCTGTTAAATCCACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACAATTTCAGTAGGAATTTaGAATCACAAAGGCCATCGA | + |
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Preference number: 2 (lower is better) Translates to: FLLNPLWKLFFSFFPFQTISVGI*NHKGHR Trigger: TCGATGGCCTTTGTGATTTCAAATTCCTACTGAAAT...TGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTGGATTTAACAGGAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR GCA 72 bp | GGGGTGATTTACCACTCACGAAGGCCACCAGCCCAGTaGTACCCAGGCCATGCCTCCCCCTCCTTGTCTTTC | + |
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Preference number: 3 (lower is better) Translates to: GVIYHSRRPPAQ*YPGHASPSLSF Trigger: GAAAGACAAGGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGGTGGCCTTCGTGAGTGGTAAATCACCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR CAA 90 bp | TACCACTCACGAAGGCCACCAGCCCAGTGCTACCCAGGCCATGCCTCCCCCTCCCATATCTGCCACCACTaGCCAACAGGCTTTTATCTA | + |
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Preference number: 3 (lower is better) Translates to: YHSRRPPAQCYPGHASPSHICHH*PTGFYL Trigger: TAGATAAAAGCCTGTTGGCAAGTGGTGGCAGATATG...GGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGGTGGCCTTCGTGAGTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR TCA 72 bp | CCACTGCTGTTCCAAGTAGCGGGCTGCCCCAGTCCTTaGACCAGCTGGAACAAAGCAGCCCTTTGTCACTCG | + |
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Preference number: 3 (lower is better) Translates to: PLLFQVAGCPSP*TSWNKAALCHS Trigger: CGAGTGACAAAGGGCTGCTTTGTTCCAGCTGGTTCAAGGACTGGGGCAGCCCGCTACTTGGAACAGCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CCA 72 bp | AGTGAAAAAGGCTCAGCAGCAGCGCAGGGGTCACAGTaGAGGAGGCCCAGCGGCAGTGGTATAAATGAGACC | + |
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Preference number: 3 (lower is better) Translates to: SEKGSAAAQGSQ*RRPSGSGINET Trigger: GGTCTCATTTATACCACTGCCGCTGGGCCTCCTCCACTGTGACCCCTGCGCTGCTGCTGAGCCTTTTTCACT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR CCA 72 bp | CTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTaGGGGGCACGAGAGAGGGAGCCCAGTGGCTTAGAG | + |
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Preference number: 3 (lower is better) Translates to: LVCRTESVLMLQ*GAREREPSGLE Trigger: CTCTAAGCCACTGGGCTCCCTCTCTCGTGCCCCCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
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| 3UTR TCA 72 bp | TCCAGATACAGAGTGATGGAATGGCTGGGCACGGCATaGAGACTGTGGGTGAGCAAGTCTAAGCTACAGCAG | + |
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Preference number: 3 (lower is better) Translates to: SRYRVMEWLGTA*RLWVSKSKLQQ Trigger: CTGCTGTAGCTTAGACTTGCTCACCCACAGTCTTCATGCCGTGCCCAGCCATTCCATCACTCTGTATCTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
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| 3UTR TCA 72 bp | TATTCCAGAGCCTGGGCTGAGGTTTTCAGAAGACTGTaGGTCAGAGCAGTAGACAGAGTGGGTGCCATGTGC | + |
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Preference number: 3 (lower is better) Translates to: YSRAWAEVFRRL*VRAVDRVGAMC Trigger: GCACATGGCACCCACTCTGTCTACTGCTCTGACTCACAGTCTTCTGAAAACCTCAGCCCAGGCTCTGGAATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR CAA 90 bp | AAAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTCAAGCTCAGCAGCCATaGTGTTTTACTGCTGCAGGT | + |
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Preference number: 3 (lower is better) Translates to: KVHLVQVHRWPRQACRLCQAQQP*CFTAAG Trigger: ACCTGCAGCAGTAAAACACAATGGCTGCTGAGCTTG...ACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR-3UTR CAA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAATGGGGACACTGGCTTaGGAGGCATATCTGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSMGTLA*EAYLEW Trigger: CCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCAT...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| 3UTR TCA 72 bp | GCCTGGTTCAGTAGCTTTGTATTCCAGAGCCTGGGCTaGGGTTTTCAGAAGACTGTGAGTCAGAGCAGTAGA | + |
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Preference number: 3 (lower is better) Translates to: AWFSSFVFQSLG*GFQKTVSQSSR Trigger: TCTACTGCTCTGACTCACAGTCTTCTGAAAACCTCAGCCCAGGCTCTGGAATACAAAGCTACTGAACCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR-3UTR CAA 90 bp | ATCTGGTCTCATGAAACTCAGCTTCAGCATGTGAAAGTGACTCCAAGTTCAGCTAAGGCCATCGAGGGGTaGTGGTTACAACCCAGAGTC | + |
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Preference number: 3 (lower is better) Translates to: IWSHETQLQHVKVTPSSAKAIEG*WLQPRV Trigger: GACTCTGGGTTGTAACCACAACCCCTCGATGGCCTT...AGCTGAACTTGGAGTCACTTTCACATGCTGAAGCTGAGTTTCATGAGACCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR TCA 72 bp | TATAAAAGTCTAGATGCGGCTGTCCCAGGCATAAGCTaGGGGAGATCAGTGAAGAGAGAACTCAAGCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: YKSLDAAVPGIS*GRSVKRELKLS Trigger: GCTGAGCTTGAGTTCTCTCTTCACTGATCTCCCTCAGCTTATGCCTGGGACAGCCGCATCTAGACTTTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR CCA 72 bp | CACTGGCTTTGGAGGCATATCTGGAGTGGTGACCAATaGGCATTGGTATTTCCAGCTCAAACAGGTCTTATC | + |
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Preference number: 3 (lower is better) Translates to: HWLWRHIWSGDQ*ALVFPAQTGLI Trigger: GATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCAGATATGCCTCCAAAGCCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| 3UTR-3UTR CAA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTATGGGGACACTGGCTTaGGAGGCATATCTGGAGTGG | + |
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Preference number: 3 (lower is better) Translates to: ENASLYFAVEDPVQSKQTMGTLA*EAYLEW Trigger: CCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCAT...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| 3UTR TCA 72 bp | GGTGTCAAAGAGAAACAAAGTCTCAGGCTCTGTCTGTaGCATCCCCGCCCCACTCCTATAATCACAAAGAAA | + |
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Preference number: 3 (lower is better) Translates to: GVKEKQSLRLCL*HPRPTPIITKK Trigger: TTTCTTTGTGATTATAGGAGTGGGGCGGGGATGTCACAGACAGAGCCTGAGACTTTGTTTCTCTTTGACACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR TCA 72 bp | GGATGGTTCCTACTAACGGAGTGCTTGCTACCTACCTaGAGTGTGCCTATAGTTTCCTTCAGTACCAAAGCA | + |
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Preference number: 3 (lower is better) Translates to: GWFLLTECLLPT*SVPIVSFSTKA Trigger: TGCTTTGGTACTGAAGGAAACTATAGGCACACTTCAGGTAGGTAGCAAGCACTCCGTTAGTAGGAACCATCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR GCA 72 bp | AGAAAACGTAGCCTTCCTCTAGCTGGGGATTCTAAGTaGACTGAACTTTCCATGGCTAACTTCACCACAACG | + |
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Preference number: 3 (lower is better) Translates to: RKRSLPLAGDSK*TELSMANFTTT Trigger: CGTTGTGGTGAAGTTAGCCATGGAAAGTTCAGTGCACTTAGAATCCCCAGCTAGAGGAAGGCTACGTTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR GCA 72 bp | AACAATTCTACACAGAGAAGATTAAAGTTCACTTGGTaGAGGTACACAGGTGGCCAAGGCAAGCATGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: NNSTQRRLKFTW*RYTGGQGKHAG Trigger: GCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTTAATCTTCTCTGTGTAGAATTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| 3UTR-3UTR CAA 90 bp | CATATCTGCCACCACTTGCCAACAGGCTTTTATCTAGAGCTAGAACTTCCAGGGATGCAAGTCTTTATTTaGCTGTTGAAGACCCAGTCC | + |
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Preference number: 3 (lower is better) Translates to: HICHHLPTGFYLELELPGMQVFI*LLKTQS Trigger: GGACTGGGTCTTCAACAGCAAAATAAAGACTTGCAT...CCCTGGAAGTTCTAGCTCTAGATAAAAGCCTGTTGGCAAGTGGTGGCAGATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR-3UTR CAA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAAAGGTTTCTCAAGCCCTaGGGAAAAGCTAAATGTTGC | + |
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Preference number: 3 (lower is better) Translates to: SRGSNTLFWTPWENVCKQRFLKP*GKAKCC Trigger: GCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCT...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| 3UTR TCA 72 bp | GAAGGACTTGGGCATGAACAAGAACATCTGGTCTCATaGAACTCAGCTTCAGCATGTGAAAGTGACTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: EGLGHEQEHLVS*NSASACESDSK Trigger: CTTGGAGTCACTTTCACATGCTGAAGCTGAGTTTCATGAGACCAGATGTTCTTGTTCATGCCCAAGTCCTTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CCA 72 bp | TCATTACTTAGGCTGGGAACGGCCACCGGCCACACATaGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: SLLRLGTATGHT*MSNQFVFLFFL Trigger: GAGAAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCCCAGCCTAAGTAATGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CCA 72 bp | CAAAACAATTCTACACAGAGAAGATTAAAGTTCACTTaGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: QNNSTQRRLKFT*CRYTGGQGKHA Trigger: TGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTTAATCTTCTCTGTGTAGAATTGTTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| 3UTR CCA 72 bp | ATTTTGACGCCAGAGGCTAACCTTAGCAGATATGACTaGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGT | + |
|
Preference number: 3 (lower is better) Translates to: ILTPEANLSRYD*FVEQSLSSCYS Trigger: ACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAGGTTAGCCTCTGGCGTCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| 3UTR TCA 72 bp | TTAGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTaGAGACCCAGTCCAGTCCAAACAAACTGCCTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: LEERECKSLFCC*RPSPVQTNCLP Trigger: TGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| 3UTR-3UTR CAA 90 bp | AATAGTAAGCACAAGATGAGTTTTTCTCTCCAGATACAGAGTGATGGAATGGCTTGCTTGAAGCAGGTTTaGCATCTCAGGTCTAAAGAC | + |
|
Preference number: 3 (lower is better) Translates to: NSKHKMSFSLQIQSDGMACLKQV*HLRSKD Trigger: GTCTTTAGACCTGAGATGCAAAACCTGCTTCAAGCA...AGCCATTCCATCACTCTGTATCTGGAGAGAAAAACTCATCTTGTGCTTACTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
||
| 3UTR TCA 72 bp | CTATCAAATCTTACTTTGAGATGCTTTGACTCATTTTaGCGCCAGAGGCTAACCTTAGCAGATATGACTGGT | + |
|
Preference number: 3 (lower is better) Translates to: LSNLTLRCFDSF*RQRLTLADMTG Trigger: ACCAGTCATATCTGCTAAGGTTAGCCTCTGGCGTCAAAATGAGTCAAAGCATCTCAAAGTAAGATTTGATAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | TACCACTCACGAAGGCCACCAGCCCAGTGCTACCCAGGCCATGCCTCCCCCTCCAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: YHSRRPPAQCYPGHASPSSSEVD*VAHGCD Trigger: GTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCT...GGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGGTGGCCTTCGTGAGTGGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | TACCACTCACGAAGGCCACCAGCCCAGTGCTACCCAGGCCATGCCTCCCCCTCCGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: YHSRRPPAQCYPGHASPSAAAGT*LAVRWT Trigger: AGTCCACCTCACTGCTAACCACGTACCGGCCGCTGC...GGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGGTGGCCTTCGTGAGTGGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVSNTGC*PSSSAA Trigger: AGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGA...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | GTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATAGATCCGCAGCTCCAGTaGAGGCTCTCGGCGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLVQVHRWPRQACRLCIDPQLQ*RLSAQA Trigger: TGCCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATC...TATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAAC 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGATGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGCSNTG*CPSSSA Trigger: GGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACA...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | TACCACTCACGAAGGCCACCAGCCCAGTGCTACCCAGGCCATGCCTCCCCCTCCGAGGACATGGGCCAATaGTTTCTTCACCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YHSRRPPAQCYPGHASPSEDMGQ*FLHLFF Trigger: GAAGAAAAGGTGAAGAAAGCATTGGCCCATGTCCTC...GGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGGTGGCCTTCGTGAGTGGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTACCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVPPEAG*IRSSSA Trigger: TGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGG...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTCCACGGAGGCTGGCGTaGCACCGGTGGAAGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: SLGAGTQVAKASMQAVYIPRRLA*HRWKHG Trigger: ACCATGCTTCCACCGGTGCCACGCCAGCCTCCGTGG...AATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACCACGGAGGCTGGCGTaGCACCGGTGGAAGCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGPRRLA*HRWKHG Trigger: ACCATGCTTCCACCGGTGCCACGCCAGCCTCCGTGG...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTGTGAGGTGGACTGCGTaGCTCACGGCTGTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: SLGAGTQVAKASMQAVYIVRWTA*LTAVTT Trigger: GGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCAC...AATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTCATCCATGTGGAGGATaGACCCACGGAGGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: KVHLVQVHRWPRQACRLCHPCGG*THGGWR Trigger: ACGCCAGCCTCCGTGGGTCCATCCTCCACATGGATG...ACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAATCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQSNTGC*PSSSAA Trigger: AGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGA...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTACCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVPPEAG*IRSSSA Trigger: TGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGG...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGATGGCTCCCCCGCCAATaGCCTGGGGTTCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGWLPRQ*PGVQIP Trigger: GGGAATTTGAACCCCAGGCCATTGGCGGGGGAGCCA...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | AAAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTTGGTTAGCAGTGAGGTaGACTGCGTGGCTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVHLVQVHRWPRQACRLCWLAVR*TAWLTA Trigger: AGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCA...ACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGAAAGT*LAVRWT Trigger: AGTCCACCTCACTGCTAACCACGTACCGGCCGCTGC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTAGTTCACACAGAGAACTaGGGCCTGACACGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVVHTEN*GLTRGI Trigger: GATGCCTCGTGTCAGGCCTCAGTTCTCTGTGTGAAC...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATACCTGCTCCCAGCCTTaGTGGGCAAAGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYTCSQP*WAKASM Trigger: CATACTGGCCTTTGCCCAGCAAGGCTGGGAGCAGGT...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGTCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPIISNGDTGFGGISGVVSNTGC*PSSSAA Trigger: AGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGA...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTATGGCTCCCCCGCCAATaGCCTGGGGTTCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVWLPRQ*PGVQIP Trigger: GGGAATTTGAACCCCAGGCCATTGGCGGGGGAGCCA...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTATCACGTCGTGGGTGTaGCCTGGAAGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGAGTQVAKASMQAVYIITSWV*PGSCGS Trigger: GCTTCCACAGCTTCCAGGCCACACCCACGACGTGAT...AATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYLPTGP*LRPHWM Trigger: CATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAG...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | TCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTGGGTGCTTCAGAGTTTaGACTGTGGCCATCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGAGTQVAKASMQAVYIGCFRV*TVAIPS Trigger: GCTTGGGATGGCCACAGTTCAAACTCTGAAGCACCC...AATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGGGTGCTTCAGAGTTTaGACTGTGGCCATCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGGCFRV*TVAIPS Trigger: GCTTGGGATGGCCACAGTTCAAACTCTGAAGCACCC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAACCTGCTCCCAGCCTTaGTGGGCAAAGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPTCSQP*WAKASM Trigger: CATACTGGCCTTTGCCCAGCAAGGCTGGGAGCAGGT...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGGATCCGCAGCTCCAGTaGAGGCTCTCGGCGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGDPQLQ*RLSAQA Trigger: TGCCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATC...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | ATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: MQVFILLLKTQSSPNKLPSNTGC*PSSSAA Trigger: AGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGA...AGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTATGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELCSNTG*CPSSSA Trigger: GGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACA...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | GTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQKALFSLYEADIQRQPKCSNTG*CPSSSA Trigger: GGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACA...CTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | GGCCATGCCTCCCCCTCCTTGTCTTTCAGAAATGTTTTGGTGTCAAAGAGAAACCCACCTCACCCAAGCTaGTCAGCCTCCTCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GHASPSLSFRNVLVSKRNPPHPS*SASSCR Trigger: CCGACAAGAGGAGGCTGAGCAGCTTGGGTGAGGTGG...GTTTCTCTTTGACACCAAAACATTTCTGAAAGACAAGGAGGGGGAGGCATGGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | AAACCCCCTGGAGATGTGCCGAGCCAAAGTAAAAACTCCAAAGCCTTAGCAGATCCACCTCACCCAAGCTaGTCAGCCTCCTCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KPPGDVPSQSKNSKALADPPHPS*SASSCR Trigger: CCGACAAGAGGAGGCTGAGCAGCTTGGGTGAGGTGG...ATCTGCTAAGGCTTTGGAGTTTTTACTTTGGCTCGGCACATCTCCAGGGGGTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATGGGCAGGTTCTCTCTaGTGGCTGCTTCCACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVWAGSL*WLLPLD Trigger: ATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGCCCA...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAACCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQPPEAG*IRSSSA Trigger: TGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGG...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGTGGCTCCCCCGCCAATaGCCTGGGGTTCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FAVEDPVQSKQTAFHAVMWLPRQ*PGVQIP Trigger: GGGAATTTGAACCCCAGGCCATTGGCGGGGGAGCCA...CATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCGTGAGGTGGACTGCGTaGCTCACGGCTGTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: WSGDQWALVFPAQTGLIFVRWTA*LTAVTT Trigger: GGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCAC...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGTTAGCAGTGAGGTaGACTGCGTGGCTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPWLAVR*TAWLTA Trigger: AGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCA...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATGGAGTAAAAGCGAGATaGGAGGCAACAGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYGVKAR*EATGAR Trigger: TCTCGCCCCTGTTGCCTCCCATCTCGCTTTTACTCC...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATGAAAGGACATCCATGTaGAGGATGGACCCACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYERTSM*RMDPRR Trigger: CCTCCGTGGGTCCATCCTCCACATGGATGTCCTTTC...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGAAAGGACATCCATGTaGAGGATGGACCCACGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGERTSM*RMDPRR Trigger: CCTCCGTGGGTCCATCCTCCACATGGATGTCCTTTC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| 3UTR CAA 72 bp | CCAGCCCAGTGCTACCCAGGCCATGCCTCCCCCTCCTaGTCTTTCAGAAATGTTTTGGTGTCAAAGAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PAQCYPGHASPS*SFRNVLVSKRN Trigger: GTTTCTCTTTGACACCAAAACATTTCTGAAAGACAAGGAGGGGGAGGCATGGCCTGGGTAGCACTGGGCTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCCGTGGCTCACGGCTGTaGCCACCACACAGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVRGSRL*PPHSAE Trigger: TTCAGCACTGTGTGGTGGTCACAGCCGTGAGCCACG...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACAGAGAACTGAGGCCTaGCACGAGGCATCTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGQRTEA*HEASDV Trigger: TACATCAGATGCCTCGTGTCAGGCCTCAGTTCTCTG...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAGTTCACACAGAGAACTaGGGCCTGACACGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPVHTEN*GLTRGI Trigger: GATGCCTCGTGTCAGGCCTCAGTTCTCTGTGTGAAC...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTGATCCGCAGCTCCAGTaGAGGCTCTCGGCGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSDPQLQ*RLSAQA Trigger: TGCCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATC...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACTGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TNCLPCSHEDLSGRIKSYCSNTG*CPSSSA Trigger: GGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACA...GTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAACCACCTCACCCAAGCTaGTCAGCCTCCTCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQPPHPS*SASSCR Trigger: CCGACAAGAGGAGGCTGAGCAGCTTGGGTGAGGTGG...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGGCGGGGGCATAATTTaGCAGATCTGTAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGGGGII*QICSDD Trigger: GTCATCGCTACAGATCTGGCAAATTATGCCCCCGCC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTACCCCCGCCAATGGCCTaGGGTTCAAATTCCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELPPPMA*GSNSRR Trigger: CCTGCGGGAATTTGAACCCCAGGCCATTGGCGGGGG...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CATATCTGCCACCACTTGCCAACAGGCTTTTATCTAGAGCTAGAACTTCCAGGGTGGTTAGCAGTGAGGTaGACTGCGTGGCTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HICHHLPTGFYLELELPGWLAVR*TAWLTA Trigger: AGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCA...CCCTGGAAGTTCTAGCTCTAGATAAAAGCCTGTTGGCAAGTGGTGGCAGATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSAAAGT*LAVRWT Trigger: AGTCCACCTCACTGCTAACCACGTACCGGCCGCTGC...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAGGAGTAAAAGCGAGATaGGAGGCAACAGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPGVKAR*EATGAR Trigger: TCTCGCCCCTGTTGCCTCCCATCTCGCTTTTACTCC...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATACTAAGTTGTCTCCGTaGTGTCCAACCGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYTKLSP*CPTAPV Trigger: CACAGGAGCGGTTGGACACCACGGAGACAACTTAGT...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAACATCCATGTGGAGGATaGACCCACGGAGGCTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQHPCGG*THGGWR Trigger: ACGCCAGCCTCCGTGGGTCCATCCTCCACATGGATG...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTACGTGGCTCACGGCTGTaGCCACCACACAGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVRGSRL*PPHSAE Trigger: TTCAGCACTGTGTGGTGGTCACAGCCGTGAGCCACG...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGCGTGGCTCACGGCTGTaGCCACCACACAGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGRGSRL*PPHSAE Trigger: TTCAGCACTGTGTGGTGGTCACAGCCGTGAGCCACG...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTTCCCATACTCATCTTaGTGGGCAGGTTCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYFPYSS*WAGSLC Trigger: GCAGAGAGAACCTGCCCATCAAGATGAGTATGGGAA...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | CATATCTGCCACCACTTGCCAACAGGCTTTTATCTAGAGCTAGAACTTCCAGGGGCAGTTCCTCAGGGTTaGGGTCGTCACTGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HICHHLPTGFYLELELPGAVPQG*GRHWFS Trigger: AGAGAACCAGTGACGACCTCAACCCTGAGGAACTGC...CCCTGGAAGTTCTAGCTCTAGATAAAAGCCTGTTGGCAAGTGGTGGCAGATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAACCTGCTCCCAGCCTTaGTGGGCAAAGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSTCSQP*WAKASM Trigger: CATACTGGCCTTTGCCCAGCAAGGCTGGGAGCAGGT...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCTCTCTTTCGATCCGCAGCTCCAGTaGAGGCTCTCGGCGCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: TGHTWMSNQFVFLFFLSFDPQLQ*RLSAQA Trigger: TGCCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATC...GAAAGAGAGAAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTAAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVSSEVD*VAHGCD Trigger: GTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCT...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGSSEVD*VAHGCD Trigger: GTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCT...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTATGGGCAGGTTCTCTCTaGTGGCTGCTTCCACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVWAGSL*WLLPLD Trigger: ATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGCCCA...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATGTGAGGTGGACTGCGTaGCTCACGGCTGTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNVRWTA*LTAVTT Trigger: GGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCAC...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | GTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: VQKALFSLYEADIQRQPKAAAGT*LAVRWT Trigger: AGTCCACCTCACTGCTAACCACGTACCGGCCGCTGC...CTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAACTAAGTTGTCTCCGTaGTGTCCAACCGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVTKLSP*CPTAPV Trigger: CACAGGAGCGGTTGGACACCACGGAGACAACTTAGT...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAAATCACGTCGTGGGTGTaGCCTGGAAGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQITSWV*PGSCGS Trigger: GCTTCCACAGCTTCCAGGCCACACCCACGACGTGAT...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: GTATGHTWMSNQFVFLFFLPTGP*LRPHWM Trigger: CATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAG...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATCTGCCTCTTTGTGCTTaGAGTTCAGTAAGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYLPLCA*SSVRLP Trigger: GGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAG...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAGCAGGTTCTCTCTGCTaGCTGCTTCCACTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPAGSLC*LLPLDV Trigger: GACATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGC...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATCCACTTGGCAGTCTGTaGGTGCTTCAGAGTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYPLGSL*VLQSLN Trigger: GTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGG...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GSQMCATSAPEDPTPSSGGSYPT*QSVGAS Trigger: TGAAGCACCCACAGACTGCCAAGTGGGATAACTTCC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| 3UTR CAA 72 bp | CTTCTACACGGGCTTCCTCTGCACAGGATGAAACCATaGCTAGCAAAGACAGCTCTCCAGTCACCCTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LLHGLPLHRMKP*LAKTALQSPCF Trigger: AAAGCAGGGTGACTGGAGAGCTGTCTTTGCTAGCAATGGTTTCATCCTGTGCAGAGGAAGCCCGTGTAGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAGAGTTCTCATATAATTTCACTAGGTGCATCTGGGTTTTTCTGCTCTCGTGGCTCACGGCTGTaGCCACCACACAGTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPQSSHIISLGASGFFCSRGSRL*PPHSAE Trigger: TTCAGCACTGTGTGGTGGTCACAGCCGTGAGCCACG...AGAGCAGAAAAACCCAGATGCACCTAGTGAAATTATATGAGAACTCTGGGGAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | AAACCCCCTGGAGATGTGCCGAGCCAAAGTAAAAACTCCAAAGCCTTAGCAGATCAGAGAACTGAGGCCTaGCACGAGGCATCTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: KPPGDVPSQSKNSKALADQRTEA*HEASDV Trigger: TACATCAGATGCCTCGTGTCAGGCCTCAGTTCTCTG...ATCTGCTAAGGCTTTGGAGTTTTTACTTTGGCTCGGCACATCTCCAGGGGGTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAGTTCACACAGAGAACTaGGGCCTGACACGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSVHTEN*GLTRGI Trigger: GATGCCTCGTGTCAGGCCTCAGTTCTCTGTGTGAAC...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCATTCCCATACTCATCTTaGTGGGCAGGTTCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPFPYSS*WAGSLC Trigger: GCAGAGAGAACCTGCCCATCAAGATGAGTATGGGAA...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCGCAGTTCCTCAGGGTTaGGGTCGTCACTGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVAVPQG*GRHWFS Trigger: AGAGAACCAGTGACGACCTCAACCCTGAGGAACTGC...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | GGCCATGCCTCCCCCTCCTTGTCTTTCAGAAATGTTTTGGTGTCAAAGAGAAACCAGAGTCACAGCCTGTaGTTTTCTGCAGCAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHASPSLSFRNVLVSKRNQSHSL*FSAAKG Trigger: CCCCTTTGCTGCAGAAAATCACAGGCTGTGACTCTG...GTTTCTCTTTGACACCAAAACATTTCTGAAAGACAAGGAGGGGGAGGCATGGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTCCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: ENASLYFAVEDPVQSKQTPPEAG*IRSSSA Trigger: TGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGG...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGTGAGGTGGACTGCGTaGCTCACGGCTGTGACCACC | + |
|
Preference number: 4 (lower is better) Translates to: ENASLYFAVEDPVQSKQTVRWTA*LTAVTT Trigger: GGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCAC...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTGGAGTAAAAGCGAGATaGGAGGCAACAGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GTATGHTWMSNQFVFLFFGVKAR*EATGAR Trigger: TCTCGCCCCTGTTGCCTCCCATCTCGCTTTTACTCC...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCGGAGTAAAAGCGAGATaGGAGGCAACAGGGGCGAGA | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVGVKAR*EATGAR Trigger: TCTCGCCCCTGTTGCCTCCCATCTCGCTTTTACTCC...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAGGGTAGCAAAGGCTaGAGTAAAAGCGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVEGSKG*SKSEMG Trigger: TCCCATCTCGCTTTTACTCCAGCCTTTGCTACCCTC...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAGAGGGTAGCAAAGGCTaGAGTAAAAGCGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPEGSKG*SKSEMG Trigger: TCCCATCTCGCTTTTACTCCAGCCTTTGCTACCCTC...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATCTTTTTCCTGTTCTTaGCGGGGGCATAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVSFSCS*RGHNLP Trigger: TGGCAAATTATGCCCCCGCCAAGAACAGGAAAAAGA...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTATCCTCAGAGAGGACATaGGCCAATGCTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVSSERT*ANAFFT Trigger: GGTGAAGAAAGCATTGGCCCATGTCCTCTCTGAGGA...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | GACACCTTTAGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGAGAGGGGATGGTCACTaGGATGGGGCCGGCTCACCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFRRTRMQVFILLLKTQRGDGH*DGAGSP Trigger: AGGTGAGCCGGCCCCATCCCAGTGACCATCCCCTCT...CTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAAGGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTAGAGCGTGGACATCCTaGGGTAGCAGTGGGAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSRAWTS*GSSGKR Trigger: CCTCTTCCCACTGCTACCTCAGGATGTCCACGCTCT...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCCAGAGAACTGAGGCCTaGCACGAGGCATCTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVQRTEA*HEASDV Trigger: TACATCAGATGCCTCGTGTCAGGCCTCAGTTCTCTG...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | AAAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KVHLVQVHRWPRQACRLCVEALT*SSLLSC Trigger: ACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCAC...ACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGTTCCCATACTCATCTTaGTGGGCAGGTTCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: FAVEDPVQSKQTAFHAVMFPYSS*WAGSLC Trigger: GCAGAGAGAACCTGCCCATCAAGATGAGTATGGGAA...CATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCATGTAGAAGCCCACAGTaGTTTCTAAGAGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPCRSPQ*FLRALR Trigger: CCTCAGAGCTCTTAGAAATCACTGTGGGCTTCTACA...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAGGGTGCTTCAGAGTTTaGACTGTGGCCATCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELGCFRV*TVAIPS Trigger: GCTTGGGATGGCCACAGTTCAAACTCTGAAGCACCC...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGTCTCCCGGAGAGCCATaGAGACATCATTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: FAVEDPVQSKQTAFHAVMSPGEP*RHHSQQ Trigger: TTGCTGTGAATGATGTCTTCATGGCTCTCCGGGAGA...CATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: ENASLYFAVEDPVQSKQTSSEVD*VAHGCD Trigger: GTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCT...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | TTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGCCGTATAGTTCTCGTTaGCCATCCACTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FAVEDPVQSKQTAFHAVMPYSSR*PSTHRA Trigger: AGCTCTGTGAGTGGATGGGCAACGAGAACTATACGG...CATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACCACCTCACCCAAGCTaGTCAGCCTCCTCTTGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKPPHPS*SASSCR Trigger: CCGACAAGAGGAGGCTGAGCAGCTTGGGTGAGGTGG...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | CCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTACCGAACTTCCATCACTaGCTCTTTGTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PVQSKQTAFHAVMKTSLVPNFHH*LFVLGV Trigger: AACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGG...TACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCTGGGCAGGTTCTCTCTaGTGGCTGCTTCCACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVWAGSL*WLLPLD Trigger: ATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGCCCA...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAATGGGCAGGTTCTCTCTaGTGGCTGCTTCCACTAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQWAGSL*WLLPLD Trigger: ATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGCCCA...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTTGGTTAGCAGTGAGGTaGACTGCGTGGCTCACGGCT | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSWLAVR*TAWLTA Trigger: AGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCA...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACATCACGTCGTGGGTGTaGCCTGGAAGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: TNCLPCSHEDLSGRIKSYITSWV*PGSCGS Trigger: GCTTCCACAGCTTCCAGGCCACACCCACGACGTGAT...GTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAATCACGTCGTGGGTGTaGCCTGGAAGCTGTGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPITSWV*PGSCGS Trigger: GCTTCCACAGCTTCCAGGCCACACCCACGACGTGAT...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNLPTGP*LRPHWM Trigger: CATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAG...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | ATGAGTTTTTCTCTCCAGATACAGAGTGATGGAATGGCTGGGCACGGCATGAAGTCCTCAGAGAGGACATaGGCCAATGCTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: MSFSLQIQSDGMAGHGMKSSERT*ANAFFT Trigger: GGTGAAGAAAGCATTGGCCCATGTCCTCTCTGAGGA...CTTCATGCCGTGCCCAGCCATTCCATCACTCTGTATCTGGAGAGAAAAACTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
||
| CDS-3UTR CCA 90 bp | GACACCTTTAGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGGGATGGTCACTGGGATaGGGCCGGCTCACCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: DTFRRTRMQVFILLLKTQGWSLG*GRLTFM Trigger: CATGAAGGTGAGCCGGCCCCATCCCAGTGACCATCC...CTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAAGGTGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGGCACCGGTGGAAGCATaGTCCCATGGCAGGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGAPVEA*SHGRNV Trigger: TACATTCCTGCCATGGGACCATGCTTCCACCGGTGC...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAGTTCACACAGAGAACTaGGGCCTGACACGAGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSVHTEN*GLTRGI Trigger: GATGCCTCGTGTCAGGCCTCAGTTCTCTGTGTGAAC...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCTTCCCATACTCATCTTaGTGGGCAGGTTCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YFAVEDPVQSKQTAFHAVFPYSS*WAGSLC Trigger: GCAGAGAGAACCTGCCCATCAAGATGAGTATGGGAA...GACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAGGGTGCTTCAGAGTTTaGACTGTGGCCATCCCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSGCFRV*TVAIPS Trigger: GCTTGGGATGGCCACAGTTCAAACTCTGAAGCACCC...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGGGCGGGGGCATAATTTaGCAGATCTGTAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: IPIISNGDTGFGGISGVVGGGII*QICSDD Trigger: GTCATCGCTACAGATCTGGCAAATTATGCCCCCGCC...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTAGGCGGGGGCATAATTTaGCAGATCTGTAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVGGGII*QICSDD Trigger: GTCATCGCTACAGATCTGGCAAATTATGCCCCCGCC...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | TGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTATTGTATCACTGCCTCTTTGTaGTTGGAGTTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WCRYTGGQGKHAGCVYYCITASL*LEFSKA Trigger: AGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGAT...ACAATAATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAATCACTGCCTCTTTGTaGTTGGAGTTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPITASL*LEFSKA Trigger: AGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGAT...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | AGCTACAGCAGGCAGCAGTTACGTTGCTTGAAGCAGGTTTTGCATCTCAGGTCTGAGGACATGGGCCAATaGTTTCTTCACCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SYSRQQLRCLKQVLHLRSEDMGQ*FLHLFF Trigger: GAAGAAAAGGTGAAGAAAGCATTGGCCCATGTCCTC...AGACCTGAGATGCAAAACCTGCTTCAAGCAACGTAACTGCTGCCTGCTGTAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
||
| CDS-3UTR GCA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCAACGTCAGGTCAACTaGAGAGTCACAGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GTATGHTWMSNQFVFLFFQRQVN*RVTACD Trigger: ATCACAGGCTGTGACTCTGCAGTTGACCTGACGTTG...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTTTTCTCTCCAGATACAGAGTGATGGAATGGCTGGGCACGGCATGAAGAGTCCTGTGATTTTCTaGAGCAAAGGGGACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MSFSLQIQSDGMAGHGMKSPVIF*SKGDSS Trigger: TGAGCTGTCCCCTTTGCTGCAGAAAATCACAGGACT...CTTCATGCCGTGCCCAGCCATTCCATCACTCTGTATCTGGAGAGAAAAACTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
||
| CDS-3UTR CCA 90 bp | TATTTAGTAGGCTTTGTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCTGGCTCCCCCGCCAATaGCCTGGGGTTCAAATTCCC | + |
|
Preference number: 4 (lower is better) Translates to: YLVGFVQKALFSLYEADIWLPRQ*PGVQIP Trigger: GGGAATTTGAACCCCAGGCCATTGGCGGGGGAGCCA...GATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCACAAAGCCTACTAAATA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: ENASLYFAVEDPVQSKQTLPTGP*LRPHWM Trigger: CATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAG...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAACTGCCTCTTTGTGCTTaGAGTTCAGTAAGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQLPLCA*SSVRLP Trigger: GGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAG...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGGCAGGTTCTCTCTGCTaGCTGCTTCCACTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGAGSLC*LLPLDV Trigger: GACATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGC...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GTATGHTWMSNQFVFLFFGSYPT*QSVGAS Trigger: TGAAGCACCCACAGACTGCCAAGTGGGATAACTTCC...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTTCCTCAGAGAGGACATaGGCCAATGCTTTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GTATGHTWMSNQFVFLFFSSERT*ANAFFT Trigger: GGTGAAGAAAGCATTGGCCCATGTCCTCTCTGAGGA...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | ACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACCAGAGAACTGAGGCCTaGCACGAGGCATCTGATGTA | + |
|
Preference number: 4 (lower is better) Translates to: TNCLPCSHEDLSGRIKSYQRTEA*HEASDV Trigger: TACATCAGATGCCTCGTGTCAGGCCTCAGTTCTCTG...GTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPVEALT*SSLLSC Trigger: ACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCAC...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCACTGGTTCTCTGGCTTaGGGACTTAATCATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSGDQWALVFPAQTGLIFTGSLA*GLNHWQ Trigger: CTGCCAATGATTAAGTCCTCAAGCCAGAGAACCAGT...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAGAGTCACAGCCTGTaGTTTTCTGCAGCAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSQSHSL*FSAAKG Trigger: CCCCTTTGCTGCAGAAAATCACAGGCTGTGACTCTG...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTATCTCCCGGAGAGCCATaGAGACATCATTCACAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELSPGEP*RHHSQQ Trigger: TTGCTGTGAATGATGTCTTCATGGCTCTCCGGGAGA...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTACAGGAATGTAGTAGGTaGCCACATGCTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVQECSR*PHALRT Trigger: TGTCCTCAGAGCATGTGGTCACCTACTACATTCCTG...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | CACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGACTTTGGCCAGCACCTaGTCCCAGCCTTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGNYSSAFSHFRHSLLRTLAST*SQPCWA Trigger: TGCCCAGCAAGGCTGGGAGCAGGTGCTGGCCAAAGT...CCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTACCGTATAGTTCTCGTTaGCCATCCACTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVPYSSR*PSTHRA Trigger: AGCTCTGTGAGTGGATGGGCAACGAGAACTATACGG...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAGGCGGGGGCATAATTTaGCAGATCTGTAGCGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSGGGII*QICSDD Trigger: GTCATCGCTACAGATCTGGCAAATTATGCCCCCGCC...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTCCAAAGGAGCCTTTCAAATaGCAGGAAGTTATCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: TNVCNFSSRGSNTLFWTPKEPFK*QEVIPL Trigger: AAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTT...TGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTACAGCCTGTGATTTTCTaGAGCAAAGGGGACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELQPVIF*SKGDSS Trigger: TGAGCTGTCCCCTTTGCTGCAGAAAATCACAGGCTG...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGCAACGTCAGGTCAACTaGAGAGTCACAGCCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: IPIISNGDTGFGGISGVVQRQVN*RVTACD Trigger: ATCACAGGCTGTGACTCTGCAGTTGACCTGACGTTG...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATACTAAGTTGTCTCCGTaGTGTCCAACCGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNTKLSP*CPTAPV Trigger: CACAGGAGCGGTTGGACACCACGGAGACAACTTAGT...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTACCACTTGGCAGTCTGTaGGTGCTTCAGAGTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELPLGSL*VLQSLN Trigger: GTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGG...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTATTAGCACACCAGCCATaGTTGAATCCCCAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELLAHQP*LNPQGS Trigger: AGAGCCTTGGGGATTCAACCATGGCTGGTGTGCTAA...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGAGGATCAAGAGGGGATaGTCACTGGGATGGGGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGNYSSAFSHFRHSLLRRIKRG*SLGWGR Trigger: CCGGCCCCATCCCAGTGACCATCCCCTCTTGATCCT...CCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| 3UTR CAA 72 bp | GCAAGTCTAAGCTACAGCAGGCAGCAGTTACGTTGCTaGAAGCAGGTTTTGCATCTCAGGTCTAAAGACATG | + |
|
Preference number: 4 (lower is better) Translates to: ASLSYSRQQLRC*KQVLHLRSKDM Trigger: CATGTCTTTAGACCTGAGATGCAAAACCTGCTTCAAGCAACGTAACTGCTGCCTGCTGTAGCTTAGACTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
||
| CDS-3UTR TCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTATGTAGAAGCCCACAGTaGTTTCTAAGAGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELCRSPQ*FLRALR Trigger: CCTCAGAGCTCTTAGAAATCACTGTGGGCTTCTACA...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTATGTAGAAGCCCACAGTaGTTTCTAAGAGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: KALFSLYEADIQRQPKCVCRSPQ*FLRALR Trigger: CCTCAGAGCTCTTAGAAATCACTGTGGGCTTCTACA...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR TCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAATCATTGGCAGCAGCTaGTTTAGCACACCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSIIGSS*FSTPAM Trigger: CATGGCTGGTGTGCTAAATCAGCTGCTGCCAATGAT...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCAATGCTACAAGGTCTTTaGCCATTTTGGCTTCAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSMLQGL*PFWLQR Trigger: TCGCTGAAGCCAAAATGGTCAAAGACCTTGTAGCAT...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATCAGGAATGTAGTAGGTaGCCACATGCTCTGAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNQECSR*PHALRT Trigger: TGTCCTCAGAGCATGTGGTCACCTACTACATTCCTG...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTGTTAAATCCACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACAACCTGCTCCCAGCCTTaGTGGGCAAAGGCCAGTATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLNPLWKLFFSFFPFQTTCSQP*WAKASM Trigger: CATACTGGCCTTTGCCCAGCAAGGCTGGGAGCAGGT...TGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTGGATTTAACAGGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATCCGTATAGTTCTCGTTaGCCATCCACTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNPYSSR*PSTHRA Trigger: AGCTCTGTGAGTGGATGGGCAACGAGAACTATACGG...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | GTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGCCGAACTTCCATCACTaGCTCTTTGTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VQKALFSLYEADIQRQPKPNFHH*LFVLGV Trigger: AACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGG...CTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR GCA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGCCGAACTTCCATCACTaGCTCTTTGTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGPNFHH*LFVLGV Trigger: AACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGG...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR GCA 90 bp | AAACCCCCTGGAGATGTGCCGAGCCAAAGTAAAAACTCCAAAGCCTTAGCAGATAAGGAGCCTTTCAAATaGCAGGAAGTTATCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: KPPGDVPSQSKNSKALADKEPFK*QEVIPL Trigger: AAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTT...ATCTGCTAAGGCTTTGGAGTTTTTACTTTGGCTCGGCACATCTCCAGGGGGTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | AACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACCTAGAGGGTAGCAAAGGCTaGAGTAAAAGCGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: NCLPCSHEDLSGRIKSYLEGSKG*SKSEMG Trigger: TCCCATCTCGCTTTTACTCCAGCCTTTGCTACCCTC...TAGGTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAAACTAAGTTGTCTCCGTaGTGTCCAACCGCTCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKTKLSP*CPTAPV Trigger: CACAGGAGCGGTTGGACACCACGGAGACAACTTAGT...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCACTGCCTCTTTGTGCTTaGAGTTCAGTAAGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSLPLCA*SSVRLP Trigger: GGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAG...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCTGCCTCTTTGTGCTTaGAGTTCAGTAAGGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSLPLCA*SSVRLP Trigger: GGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAG...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAAGCAGGTTCTCTCTGCTaGCTGCTTCCACTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKAGSLC*LLPLDV Trigger: GACATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGC...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAATCAGAGTTTGAACTGTaGCCATCCCAAGCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRGSNTLFWTPWENVCKQSEFEL*PSQAVE Trigger: TTCTACAGCTTGGGATGGCCACAGTTCAAACTCTGA...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | TCTCCCCAGAGTTCTCATATAATTTCACTAGGTGCATCTGGGTTTTTCTGCTCTCCACTTGGCAGTCTGTaGGTGCTTCAGAGTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSSHIISLGASGFFCSPLGSL*VLQSLN Trigger: GTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGG...AGAGCAGAAAAACCCAGATGCACCTAGTGAAATTATATGAGAACTCTGGGGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATCCACTTGGCAGTCTGTaGGTGCTTCAGAGTTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNPLGSL*VLQSLN Trigger: GTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGG...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPGSYPT*QSVGAS Trigger: TGAAGCACCCACAGACTGCCAAGTGGGATAACTTCC...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAAGACAGCACCATCACCTaGGTTCCTGGCTTCAGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKDSTIT*VPGFRD Trigger: ATCTCTGAAGCCAGGAACCCAGGTGATGGTGCTGTC...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | TATTTAGTAGGCTTTGTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCGCACCGGTGGAAGCATaGTCCCATGGCAGGAATGTA | + |
|
Preference number: 4 (lower is better) Translates to: YLVGFVQKALFSLYEADIAPVEA*SHGRNV Trigger: TACATTCCTGCCATGGGACCATGCTTCCACCGGTGC...GATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCACAAAGCCTACTAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTGCTTCAGGAGTCTTGTaGACAGCACCATCACCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSASGVL*TAPSPS Trigger: TGAAGGTGATGGTGCTGTCCACAAGACTCCTGAAGC...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WSGDQWALVFPAQTGLIFVEALT*SSLLSC Trigger: ACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCAC...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTGTAGAAGCCCACAGTaGTTTCTAAGAGCTCTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MQVFILLLKTQSSPNKLPCRSPQ*FLRALR Trigger: CCTCAGAGCTCTTAGAAATCACTGTGGGCTTCTACA...AGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | TCTCCCCAGAGTTCTCATATAATTTCACTAGGTGCATCTGGGTTTTTCTGCTCTGAGATCAGTGAGGCCTaGGGACATATGTTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQSSHIISLGASGFFCSEISEA*GHMFNV Trigger: GACATTGAACATATGTCCTCAGGCCTCACTGATCTC...AGAGCAGAAAAACCCAGATGCACCTAGTGAAATTATATGAGAACTCTGGGGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR TCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAGAGATCAGTGAGGCCTaGGGACATATGTTCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPEISEA*GHMFNV Trigger: GACATTGAACATATGTCCTCAGGCCTCACTGATCTC...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACCGTATAGTTCTCGTTaGCCATCCACTCACAGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKPYSSR*PSTHRA Trigger: AGCTCTGTGAGTGGATGGGCAACGAGAACTATACGG...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR GCA 90 bp | ATCTGGTCTCATGAAACTCAGCTTCAGCATGTGAAAGTGACTCCAAGTTCAGCTATCACTGCCTCTTTGTaGTTGGAGTTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IWSHETQLQHVKVTPSSAITASL*LEFSKA Trigger: AGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGAT...AGCTGAACTTGGAGTCACTTTCACATGCTGAAGCTGAGTTTCATGAGACCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR GCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCCGAACTTCCATCACTaGCTCTTTGTGCTTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSPNFHH*LFVLGV Trigger: AACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGG...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CCA 90 bp | GTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTCAGAGTTTGAACTGTaGCCATCCCAAGCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VQKALFSLYEADIQRQPKSEFEL*PSQAVE Trigger: TTCTACAGCTTGGGATGGCCACAGTTCAAACTCTGA...CTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CCA 90 bp | ATCTGGTCTCATGAAACTCAGCTTCAGCATGTGAAAGTGACTCCAAGTTCAGCTTCATTCACAGCAATTTaGGATTTGGGCAACGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IWSHETQLQHVKVTPSSASFTAI*DLGNVR Trigger: CCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGA...AGCTGAACTTGGAGTCACTTTCACATGCTGAAGCTGAGTTTCATGAGACCAGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CCA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGTCATTCACAGCAATTTaGGATTTGGGCAACGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPIISNGDTGFGGISGVVSFTAI*DLGNVR Trigger: CCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGA...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR TCA 90 bp | ACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTCTCTCTTTCACTGGTTCTCTGGCTTaGGGACTTAATCATTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TGHTWMSNQFVFLFFLSFTGSLA*GLNHWQ Trigger: CTGCCAATGATTAAGTCCTCAAGCCAGAGAACCAGT...GAAAGAGAGAAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR TCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCATTTTCAGGAGATCAGTaGGGCCTGAGGACATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPFSGDQ*GLRTYV Trigger: AACATATGTCCTCAGGCCTCACTGATCTCCTGAAAA...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR TCA 90 bp | AATAGTAAGCACAAGATGAGTTTTTCTCTCCAGATACAGAGTGATGGAATGGCTCTTGGTGAAGTCCTGTaGTTTTCTGCAGCAAAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: NSKHKMSFSLQIQSDGMALGEVL*FSAAKG Trigger: CCCCTTTGCTGCAGAAAATCACAGGACTTCACCAAG...AGCCATTCCATCACTCTGTATCTGGAGAGAAAAACTCATCTTGTGCTTACTATT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000148994.3 |
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| CDS-3UTR GCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAATCACTGCCTCTTTGTaGTTGGAGTTCAGTAAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSITASL*LEFSKA Trigger: AGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGAT...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR GCA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAAGGAGCCTTTCAAATaGCAGGAAGTTATCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKQTAFHAVMKTSLVELKEPFK*QEVIPL Trigger: AAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTT...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR GCA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTGAGGACATGGGCCAATaGTTTCTTCACCTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SKQTAFHAVMKTSLVELSEDMGQ*FLHLFF Trigger: GAAGAAAAGGTGAAGAAAGCATTGGCCCATGTCCTC...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR GCA 90 bp | GGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGCTGGGACAGCCTGTGATTTTCTaGAGCAAAGGGGACAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GNYSSAFSHFRHSLLRLGQPVIF*SKGDSS Trigger: TGAGCTGTCCCCTTTGCTGCAGAAAATCACAGGCTG...TCCCAGCCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR CCA 90 bp | TATTTAGTAGGCTTTGTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCGAGGGTAGCAAAGGCTaGAGTAAAAGCGAGATGGGA | + |
|
Preference number: 4 (lower is better) Translates to: YLVGFVQKALFSLYEADIEGSKG*SKSEMG Trigger: TCCCATCTCGCTTTTACTCCAGCCTTTGCTACCCTC...GATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCACAAAGCCTACTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| CDS-3UTR CCA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATCTTTTTCCTGTTCTTaGCGGGGGCATAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSSFSCS*RGHNLP Trigger: TGGCAAATTATGCCCCCGCCAAGAACAGGAAAAAGA...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR CCA 90 bp | ACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACTCTTTTTCCTGTTCTTaGCGGGGGCATAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNCLPCSHEDLSGRIKSYSFSCS*RGHNLP Trigger: TGGCAAATTATGCCCCCGCCAAGAACAGGAAAAAGA...GTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR CCA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATTCTTTTTCCTGTTCTTaGCGGGGGCATAATTTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNSFSCS*RGHNLP Trigger: TGGCAAATTATGCCCCCGCCAAGAACAGGAAAAAGA...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| CDS-3UTR CCA 90 bp | CACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGGCAGGTTCTCTCTGCTaGCTGCTTCCACTAGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: HSGNYSSAFSHFRHSLLRAGSLC*LLPLDV Trigger: GACATCTAGTGGAAGCAGCCAGCAGAGAGAACCTGC...CCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR CCA 90 bp | TATTTAGTAGGCTTTGTGCAAAAGGCACTCTTTTCCCTTTATGAAGCTGACATCGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YLVGFVQKALFSLYEADIGSYPT*QSVGAS Trigger: TGAAGCACCCACAGACTGCCAAGTGGGATAACTTCC...GATGTCAGCTTCATAAAGGGAAAAGAGTGCCTTTTGCACAAAGCCTACTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| CDS-3UTR TCA 90 bp | AACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACCTAGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCLPCSHEDLSGRIKSYLVEALT*SSLLSC Trigger: ACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCAC...TAGGTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR TCA 90 bp | TTCCTGTTAAATCCACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACAATCATTGGCAGCAGCTaGTTTAGCACACCAGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLLNPLWKLFFSFFPFQTIIGSS*FSTPAM Trigger: CATGGCTGGTGTGCTAAATCAGCTGCTGCCAATGAT...TGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTGGATTTAACAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR TCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCACAGAGTAAATGTATATaGGCAGGATCAGCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPQSKCI*AGSAVP Trigger: AGGAACTGCTGATCCTGCTCATATACATTTACTCTG...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR TCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAATTTTCAGGAGATCAGTaGGGCCTGAGGACATATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKFSGDQ*GLRTYV Trigger: AACATATGTCCTCAGGCCTCACTGATCTCCTGAAAA...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR GCA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAAGGAGCCTTTCAAATaGCAGGAAGTTATCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: RRTRMQVFILLLKTQSSPKEPFK*QEVIPL Trigger: AAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTT...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR CCA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTTCAGAGTTTGAACTGTaGCCATCCCAAGCTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENASLYFAVEDPVQSKQTSEFEL*PSQAVE Trigger: TTCTACAGCTTGGGATGGCCACAGTTCAAACTCTGA...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR CCA 90 bp | CACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGTTAGCACACCAGCCATaGTTGAATCCCCAAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSGNYSSAFSHFRHSLLRLAHQP*LNPQGS Trigger: AGAGCCTTGGGGATTCAACCATGGCTGGTGTGCTAA...CCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CAA 72 bp | TTTAGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTaGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: FRRTRMQVFILL*KTQSSPNKLPS Trigger: GGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| 3UTR CAA 72 bp | GACACCTTTAGAAGAACGAGAATGCAAGTCTTTATTTaGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DTFRRTRMQVFI*LLKTQSSPNKL Trigger: CAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCTAAAGGTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR TCA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACAGAGTAAATGTATATaGGCAGGATCAGCAGTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TRMQVFILLLKTQSSPNKQSKCI*AGSAVP Trigger: AGGAACTGCTGATCCTGCTCATATACATTTACTCTG...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CCA 90 bp | CCCGCAGGTGACACGCAGGACCCTTCACCGCCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCAGGCTCTCGGCGCAGGCAGCGTCCA | + |
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Preference number: 5 (lower is better) Translates to: PAGDTQDPSPPPEAG*IRSSSAGSRRRQRP Trigger: TGGACGCTGCCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGGCGGTGAAGGGTCCTGCGTGTCACCTGCGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 90 bp | ACCGGCTGCTGCCCCTCGAGCTCGGCCGCTGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACTGCGTGGCTCACGGCTGTGACCACC | + |
|
Preference number: 5 (lower is better) Translates to: TGCCPSSSAAAAAGT*LAVRWTAWLTAVTT Trigger: GGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCACGTACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCAGCAGCCGGT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS TCA 90 bp | TGCTTGGCTCCCCCGCCAATGGCCTGGGGTTCAAATTCCCGCAGGTaGCACGCAGGACCCTTCACCGCCTCCAGAAGCCGGCTGGATCCG | + |
|
Preference number: 5 (lower is better) Translates to: CLAPPPMAWGSNSRR*HAGPFTASRSRLDP Trigger: CGGATCCAGCCGGCTTCTGGAGGCGGTGAAGGGTCCTGCGTGTCACCTGCGGGAATTTGAACCCCAGGCCATTGGCGGGGGAGCCAAGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS GCA 90 bp | CCCATCCACTCACAGAGCTTCTCCTCCAGCTGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCCGCTGCAGCGGCCGGTACGTGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: PIHSQSFSSSCSNTG*CPSSSAAAAAGTWL Trigger: TAACCACGTACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACAGCTGGAGGAGAAGCTCTGTGAGTGGATGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS GCA 90 bp | ATCCACTCACAGAGCTTCTCCTCCAGCTGTTCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCTGCAGCGGCCGGTACGTGGTTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHSQSFSSSCSNTGC*PSSSAAAAAGTWLA Trigger: TGCTAACCACGTACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACAGCTGGAGGAGAAGCTCTGTGAGTGGAT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS GCA 90 bp | CTCGGCCGCTGCAGCGGCCGGTACGTGGTTAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGACCACCACACAGTGCTGAAAGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LGRCSGRYVVSSEVD*VAHGCDHHTVLKVT Trigger: AGTCACTTTCAGCACTGTGTGGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCACGTACCGGCCGCTGCAGCGGCCGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS-3UTR CAA 90 bp | GTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATAACCGCCCGGGGCTGCTaGGCTCCCCCGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHLVQVHRWPRQACRLCITARGC*APPPMA Trigger: GGCCATTGGCGGGGGAGCCAAGCAGCCCCGGGCGGT...TATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| CDS CCA 90 bp | GCAAGGCAGCCTGGTGCAATCACGTTCTGGTTTTCCTCCACAGCCTaGACAGCAGTGAGCTCGGCCATGTTGACCATCACGTCGTGGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARQPGAITFWFSSTA*TAVSSAMLTITSWV Trigger: CACCCACGACGTGATGGTCAACATGGCCGAGCTCACTGCTGTCCAGGCTGTGGAGGAAAACCAGAACGTGATTGCACCAGGCTGCCTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 90 bp | GAGGCCTCATTGGATGGGGCAAGGCAGCCTGGTGCAATCACGTTCTaGTTTTCCTCCACAGCCTGGACAGCAGTGAGCTCGGCCATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EASLDGARQPGAITF*FSSTAWTAVSSAML Trigger: CAACATGGCCGAGCTCACTGCTGTCCAGGCTGTGGAGGAAAACCAGAACGTGATTGCACCAGGCTGCCTTGCCCCATCCAATGAGGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS-3UTR CAA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAAACCGCCCGGGGCTGCTaGGCTCCCCCGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: SRGSNTLFWTPWENVCKQTARGC*APPPMA Trigger: GGCCATTGGCGGGGGAGCCAAGCAGCCCCGGGCGGT...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
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| CDS GCA 90 bp | CGAGAAACAACGGGACGTGGAGCACCTCGGCCGTATAGTTCTCGTTaGCCATCCACTCACAGAGCTTCTCCTCCAGCTGTTCGAACACCG | + |
|
Preference number: 5 (lower is better) Translates to: RETTGRGAPRPYSSR*PSTHRASPPAVRTP Trigger: CGGTGTTCGAACAGCTGGAGGAGAAGCTCTGTGAGTGGATGGGCAACGAGAACTATACGGCCGAGGTGCTCCACGTCCCGTTGTTTCTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 90 bp | CTGCCTCTTTGTGCTTGGAGTTCAGTAAGGCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATGGGGCAAGGCAGCCTGGTGCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LPLCAWSSVRLPTGP*LRPHWMGQGSLVQS Trigger: TGATTGCACCAGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 90 bp | TCAGCGACTGTGACGCCGCCCACCACAAAGAGGATCAAGAGGGGATaGTCACTGGGATGGGGCCGGCTCACCTTCATGAACATGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: SATVTPPTTKRIKRG*SLGWGRLTFMNMLN Trigger: ATTCAGCATGTTCATGAAGGTGAGCCGGCCCCATCCCAGTGACCATCCCCTCTTGATCCTCTTTGTGGTGGGCGGCGTCACAGTCGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS-3UTR CAA 90 bp | CAGTCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAACCGCCCGGGGCTGCTaGGCTCCCCCGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QSKQTAFHAVMKTSLVELTARGC*APPPMA Trigger: GGCCATTGGCGGGGGAGCCAAGCAGCCCCGGGCGGT...TAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGACTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS-3UTR CAA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGACCGCCCGGGGCTGCTaGGCTCCCCCGCCAATGGCC | + |
|
Preference number: 5 (lower is better) Translates to: IPIISNGDTGFGGISGVVTARGC*APPPMA Trigger: GGCCATTGGCGGGGGAGCCAAGCAGCCCCGGGCGGT...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CCA 90 bp | ACAGCCTGGACAGCAGTGAGCTCGGCCATGTTGACCATCACGTCGTaGGTGTGGCCTGGAAGCTGTGGAAGCACTGACATGATCTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TAWTAVSSAMLTITS*VWPGSCGSTDMIFS Trigger: AGAGAAGATCATGTCAGTGCTTCCACAGCTTCCAGGCCACACCCACGACGTGATGGTCAACATGGCCGAGCTCACTGCTGTCCAGGCTGT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 90 bp | TGGAGTTCAGTAAGGCTTCCCACAGGGCCTTGGCTGAGGCCTCATTaGATGGGGCAAGGCAGCCTGGTGCAATCACGTTCTGGTTTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: WSSVRLPTGPWLRPH*MGQGSLVQSRSGFP Trigger: AGGAAAACCAGAACGTGATTGCACCAGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS-3UTR CAA 90 bp | GTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTGGCTGAGGCCTCATaGGATGGGGCAAGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VHLVQVHRWPRQACRLCILAEAS*DGARQP Trigger: AGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAA...TATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
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| CDS TCA 90 bp | CCATCACGTCGTGGGTGTGGCCTGGAAGCTGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGTCTCCGTGGTGTCCAACCGCTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSRRGCGLEAVEALT*SSLLSCLRGVQPLL Trigger: CAGGAGCGGTTGGACACCACGGAGACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCACAGCTTCCAGGCCACACCCACGACGTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS GCA 90 bp | GCTGCTTCCACTAGATGTCTCCGAACTTCCATCACTGCCTCTTTGTaGTTGGAGTTCAGTAAGGCTTCCCACAGGGCCTTGGCTGAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AASTRCLRTSITASL*LEFSKASHRALAEA Trigger: GGCCTCAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGAAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS GCA 90 bp | TTGGGCAACGTCAGGTCAACTGCAGAGTCACAGCCTGTGATTTTCTaGAGCAAAGGGGACAGCTCAGACTCCTCAGAGAGGACATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGNVRSTAESQPVIF*SKGDSSDSSERTWA Trigger: GGCCCATGTCCTCTCTGAGGAGTCTGAGCTGTCCCCTTTGCTGCAGAAAATCACAGGCTGTGACTCTGCAGTTGACCTGACGTTGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATGCTTCCCACAGGGCCTaGGCTGAGGCCTCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYASHRA*AEASLD Trigger: ATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGC...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CAA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGAGCTTCCCACAGGGCCTaGGCTGAGGCCTCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GSQMCATSAPEDPTPSSGASHRA*AEASLD Trigger: ATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGC...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS CCA 90 bp | TGGACAGCAGTGAGCTCGGCCATGTTGACCATCACGTCGTGGGTGTaGCCTGGAAGCTGTGGAAGCACTGACATGATCTTCTCTACTAAG | + |
|
Preference number: 5 (lower is better) Translates to: WTAVSSAMLTITSWV*PGSCGSTDMIFSTK Trigger: CTTAGTAGAGAAGATCATGTCAGTGCTTCCACAGCTTCCAGGCCACACCCACGACGTGATGGTCAACATGGCCGAGCTCACTGCTGTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS CCA 90 bp | CCAGCGATCTCCCGGAGAGCCATGAAGACATCATTCACAGCAATTTaGGATTTGGGCAACGTCAGGTCAACTGCAGAGTCACAGCCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: PAISRRAMKTSFTAI*DLGNVRSTAESQPV Trigger: CACAGGCTGTGACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGATGTCTTCATGGCTCTCCGGGAGATCGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | CATATCTGCCACCACTTGCCAACAGGCTTTTATCTAGAGCTAGAACTTCCAGGGTTGGCTGAGGCCTCATaGGATGGGGCAAGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: HICHHLPTGFYLELELPGLAEAS*DGARQP Trigger: AGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAA...CCCTGGAAGTTCTAGCTCTAGATAAAAGCCTGTTGGCAAGTGGTGGCAGATATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CAA 90 bp | AAGTTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTACTTCCCATACTCATCTaGATGGGCAGGTTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KFTWCRYTGGQGKHAGCVLPILI*MGRFSL Trigger: CAGAGAGAACCTGCCCATCAAGATGAGTATGGGAAG...TACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAACTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CAA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATAGGAAGTTATCCCACTaGGCAGTCTGTGGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYRKLSH*AVCGCF Trigger: GAAGCACCCACAGACTGCCAAGTGGGATAACTTCCT...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS TCA 90 bp | GAAGCATGGTCCCATGGCAGGAATGTAGTAGGTGACCACATGCTCTaGGGACAAAGGAGCACTGTAGAAGGAGCCTTTCAAATGCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: EAWSHGRNVVGDHML*GQRSTVEGAFQMPG Trigger: TCCTGGCATTTGAAAGGCTCCTTCTACAGTGCTCCTTTGTCCTCAGAGCATGTGGTCACCTACTACATTCCTGCCATGGGACCATGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS CCA 90 bp | GGCTCTGTAGAAGGAGCCTTTCAAATGCCAGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCAGAGTTTGAACTGTGGCCATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: GSVEGAFQMPGSYPT*QSVGASEFELWPSQ Trigger: TTGGGATGGCCACAGTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTTCTACAGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | GGCTCACAAATGTGTGCAACTTCAGCTCCAGAGGATCCAACACCCTCTTCTGGACTTCCCATACTCATCTaGATGGGCAGGTTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: GSQMCATSAPEDPTPSSGLPILI*MGRFSL Trigger: CAGAGAGAACCTGCCCATCAAGATGAGTATGGGAAG...TCCAGAAGAGGGTGTTGGATCCTCTGGAGCTGAAGTTGCACACATTTGTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS TCA 90 bp | TCGTCACTGGTTCTCTGGCTTGAGGACTTAATCATTGGCAGCAGCTaGTTTAGCACACCAGCCATGGTTGAATCCCCAAGGCTCTGTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SSLVLWLEDLIIGSS*FSTPAMVESPRLCR Trigger: TCTACAGAGCCTTGGGGATTCAACCATGGCTGGTGTGCTAAATCAGCTGCTGCCAATGATTAAGTCCTCAAGCCAGAGAACCAGTGACGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS GCA 90 bp | GACATCATTCACAGCAATTTGGGATTTGGGCAACGTCAGGTCAACTaGAGAGTCACAGCCTGTGATTTTCTGCAGCAAAGGGGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: DIIHSNLGFGQRQVN*RVTACDFLQQRGQL Trigger: GAGCTGTCCCCTTTGCTGCAGAAAATCACAGGCTGTGACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGATGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS CCA 90 bp | AGCACTGTAGAAGGAGCCTTTCAAATGCCAGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCAGAGTTTGAACTGTGGCCATCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: STVEGAFQMPGSYPT*QSVGASEFELWPSQ Trigger: TTGGGATGGCCACAGTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTTCTACAGTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR CAA 90 bp | ATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTTGGCTGAGGCCTCATaGGATGGGGCAAGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MQVFILLLKTQSSPNKLPLAEAS*DGARQP Trigger: AGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAA...AGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATTTGGCTGAGGCCTCATaGGATGGGGCAAGGCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNLAEAS*DGARQP Trigger: AGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAA...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CAA 90 bp | CAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCAGCTTCCCACAGGGCCTaGGCTGAGGCCTCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QTNCLPCSHEDLSGRIKSASHRA*AEASLD Trigger: ATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGC...TGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TTCACTTGGTGCAGGTACACAGGTGGCCAAGGCAAGCATGCAGGCTGTGTATATTCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: FTWCRYTGGQGKHAGCVYSITAS*CLEFSK Trigger: CTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGA...ATATACACAGCCTGCATGCTTGCCTTGGCCACCTGTGTACCTGCACCAAGTGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCAGCAGTTCCTCAGGGTaGAGGTCGTCACTGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WSGDQWALVFPAQTGLIFSSSSG*RSSLVL Trigger: GAGAACCAGTGACGACCTCAACCCTGAGGAACTGCT...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAAGCTTCCCACAGGGCCTaGGCTGAGGCCTCATTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TRMQVFILLLKTQSSPNKASHRA*AEASLD Trigger: ATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGC...TTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCAGGAAGTTATCCCACTaGGCAGTCTGTGGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: WSGDQWALVFPAQTGLIFRKLSH*AVCGCF Trigger: GAAGCACCCACAGACTGCCAAGTGGGATAACTTCCT...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TCCAGAGGATCCAACACCCTCTTCTGGACTCCATGGGAAAATGTATGTAAGCAAAGGAAGTTATCCCACTaGGCAGTCTGTGGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SRGSNTLFWTPWENVCKQRKLSH*AVCGCF Trigger: GAAGCACCCACAGACTGCCAAGTGGGATAACTTCCT...TTGCTTACATACATTTTCCCATGGAGTCCAGAAGAGGGTGTTGGATCCTCTGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CAA 90 bp | TCCAAACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTGCGGCTTCAGGAGTCTaGTGGACAGCACCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: SKQTAFHAVMKTSLVELSAASGV*WTAPSP Trigger: AGGTGATGGTGCTGTCCACAAGACTCCTGAAGCCGC...ACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGTTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ACAAACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACGCGGCTTCAGGAGTCTaGTGGACAGCACCATCACCT | + |
|
Preference number: 5 (lower is better) Translates to: TNCLPCSHEDLSGRIKSYAASGV*WTAPSP Trigger: AGGTGATGGTGCTGTCCACAAGACTCCTGAAGCCGC...GTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTTTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATGATCTTCTCTACTAAGTaGTCTCCGTGGTGTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: FAVEDPVQSKQTAFHAVMIFSTK*SPWCPT Trigger: GGTTGGACACCACGGAGACAACTTAGTAGAGAAGAT...CATGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGTGGTGACCAATGGGCATTGGTATTTCCAGCTCAAACAGGTCTTATCTTCACTGCCTCTTTGTGCTaGGAGTTCAGTAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: WSGDQWALVFPAQTGLIFTASLC*EFSKAS Trigger: GGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGT...GAAGATAAGACCTGTTTGAGCTGGAAATACCAATGCCCATTGGTCACCACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCACTTCCCATACTCATCTaGATGGGCAGGTTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSLPILI*MGRFSL Trigger: CAGAGAGAACCTGCCCATCAAGATGAGTATGGGAAG...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGAGGAAGTTATCCCACTaGGCAGTCTGTGGGTGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: IPIISNGDTGFGGISGVVRKLSH*AVCGCF Trigger: GAAGCACCCACAGACTGCCAAGTGGGATAACTTCCT...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | AAGGCACTCTTTTCCCTTTATGAAGCTGACATCCAAAGACAACCCAAGTGCGTAACTGCCTCTTTGTGCTaGGAGTTCAGTAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KALFSLYEADIQRQPKCVTASLC*EFSKAS Trigger: GGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGT...TACGCACTTGGGTTGTCTTTGGATGTCAGCTTCATAAAGGGAAAAGAGTGCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075848.13 |
||
| CDS-3UTR CAA 90 bp | CTTAGCAGATATGACTGGTTTGTAGAACAGAGTCTGTCCTCATGTTACAGTGGGACTGCCTCTTTGTGCTaGGAGTTCAGTAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: LSRYDWFVEQSLSSCYSGTASLC*EFSKAS Trigger: GGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGT...CCCACTGTAACATGAGGACAGACTCTGTTCTACAAACCAGTCATATCTGCTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTGCCTTCCATGCAGTCATCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: ILLLKTQSSPNKLPSMQSSITAS*CLEFSK Trigger: CTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGA...TGACTGCATGGAAGGCAGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ATACCTATAATTAGTAATGGGGACACTGGCTTTGGAGGCATATCTGGAGTGGTGCTTCCCATACTCATCTaGATGGGCAGGTTCTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: IPIISNGDTGFGGISGVVLPILI*MGRFSL Trigger: CAGAGAGAACCTGCCCATCAAGATGAGTATGGGAAG...CACCACTCCAGATATGCCTCCAAAGCCAGTGTCCCCATTACTAATTATAGGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | GAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAACAAACTAGCAGTTCCTCAGGGTaGAGGTCGTCACTGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ENASLYFAVEDPVQSKQTSSSSG*RSSLVL Trigger: GAGAACCAGTGACGACCTCAACCCTGAGGAACTGCT...AGTTTGTTTGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | GGAACGGCCACCGGCCACACATGGATGTCTAACCAGTTTGTTTTTCTTTTCTTTGATGCTACAAGGTCTTaGACCATTTTGGCTTCAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTATGHTWMSNQFVFLFFDATRS*TILASA Trigger: CGCTGAAGCCAAAATGGTCAAAGACCTTGTAGCATC...AAAGAAAAGAAAAACAAACTGGTTAGACATCCATGTGTGGCCGGTGGCCGTTCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CAA 90 bp | AGAAGAACGAGAATGCAAGTCTTTATTTTGCTGTTGAAGACCCAGTCCAGTCCAAGGTCTTTGACCATTTaGGCTTCAGCGACTGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: RRTRMQVFILLLKTQSSPRSLTI*ASATVT Trigger: CGTCACAGTCGCTGAAGCCAAAATGGTCAAAGACCT...TGGACTGGACTGGGTCTTCAACAGCAAAATAAAGACTTGCATTCTCGTTCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS-3UTR CAA 90 bp | AACTGCCTTCCATGCAGTCATGAAGACCTCTCTGGTAGAATTAAGTCATACCTATCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: NCLPCSHEDLSGRIKSYLSITAS*CLEFSK Trigger: CTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGA...TAGGTATGACTTAATTCTACCAGAGAGGTCTTCATGACTGCATGGAAGGCAGTT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
||
| CDS-3UTR CAA 90 bp | ATGAGGTTTCTCAAGCCCTTGGGAAAAGCTAAATGTTGCCCTTGTGCTCAAAATTCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: MRFLKPLGKAKCCPCAQNSITAS*CLEFSK Trigger: CTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGA...ATTTTGAGCACAAGGGCAACATTTAGCTTTTCCCAAGGGCTTGAGAAACCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151474.3 |
||
| CDS-3UTR CAA 90 bp | CACTCTGGAAACTATTCTTCAGCTTTTTCCCATTTCAGACATTCATTACTTAGGACTGCCTCTTTGTGCTaGGAGTTCAGTAAGGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSGNYSSAFSHFRHSLLRTASLC*EFSKAS Trigger: GGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGT...CCTAAGTAATGAATGTCTGAAATGGGAAAAAGCTGAAGAATAGTTTCCAGAGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
||
| CDS GCA 72 bp | CAGAGCTTCTCCTCCAGCTGTTCGAACACCGGCTGCTaGCCCTCGAGCTCGGCCGCTGCAGCGGCCGGTACG | + |
|
Preference number: 6 (lower is better) Translates to: QSFSSSCSNTGC*PSSSAAAAAGT Trigger: CGTACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACAGCTGGAGGAGAAGCTCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS CCA 72 bp | GACACGCAGGACCCTTCACCGCCTCCAGAAGCCGGCTaGATCCGCAGCTCCAGTGCAGGCTCTCGGCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: DTQDPSPPPEAG*IRSSSAGSRRR Trigger: CCTGCGCCGAGAGCCTGCACTGGAGCTGCGGATCCAGCCGGCTTCTGGAGGCGGTGAAGGGTCCTGCGTGTC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS CCA 72 bp | TGCCCCTCGAGCTCGGCCGCTGCAGCGGCCGGTACGTaGTTAGCAGTGAGGTGGACTGCGTGGCTCACGGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPSSSAAAAAGT*LAVRWTAWLTA Trigger: AGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCACGTACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS GCA 72 bp | TCACAGAGCTTCTCCTCCAGCTGTTCGAACACCGGCTaGTGCCCCTCGAGCTCGGCCGCTGCAGCGGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SQSFSSSCSNTG*CPSSSAAAAAG Trigger: ACCGGCCGCTGCAGCGGCCGAGCTCGAGGGGCAGCAGCCGGTGTTCGAACAGCTGGAGGAGAAGCTCTGTGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS TCA 72 bp | CCCCCGCCAATGGCCTGGGGTTCAAATTCCCGCAGGTaGCACGCAGGACCCTTCACCGCCTCCAGAAGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PPPMAWGSNSRR*HAGPFTASRSR Trigger: CCGGCTTCTGGAGGCGGTGAAGGGTCCTGCGTGTCACCTGCGGGAATTTGAACCCCAGGCCATTGGCGGGGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS GCA 72 bp | TGCAGCGGCCGGTACGTGGTTAGCAGTGAGGTGGACTaGGTGGCTCACGGCTGTGACCACCACACAGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: CSGRYVVSSEVD*VAHGCDHHTVL Trigger: CAGCACTGTGTGGTGGTCACAGCCGTGAGCCACGCAGTCCACCTCACTGCTAACCACGTACCGGCCGCTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
||
| CDS CCA 72 bp | GGACCCACGGAGGCTGGCGTGGCACCGGTGGAAGCATaGTCCCATGGCAGGAATGTAGTAGGTGACCACATG | + |
|
Preference number: 6 (lower is better) Translates to: GPTEAGVAPVEA*SHGRNVVGDHM Trigger: CATGTGGTCACCTACTACATTCCTGCCATGGGACCATGCTTCCACCGGTGCCACGCCAGCCTCCGTGGGTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | ACATCCATGTGGAGGATGGACCCACGGAGGCTGGCGTaGCACCGGTGGAAGCATGGTCCCATGGCAGGAATG | + |
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Preference number: 6 (lower is better) Translates to: TSMWRMDPRRLA*HRWKHGPMAGM Trigger: CATTCCTGCCATGGGACCATGCTTCCACCGGTGCCACGCCAGCCTCCGTGGGTCCATCCTCCACATGGATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | AAAGGACATCCATGTGGAGGATGGACCCACGGAGGCTaGCGTGGCACCGGTGGAAGCATGGTCCCATGGCAG | + |
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Preference number: 6 (lower is better) Translates to: KGHPCGGWTHGG*RGTGGSMVPWQ Trigger: CTGCCATGGGACCATGCTTCCACCGGTGCCACGCCAGCCTCCGTGGGTCCATCCTCCACATGGATGTCCTTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075848.13 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | GTAAGGCTTCCCACAGGGCCTTGGCTGAGGCCTCATTaGATGGGGCAAGGCAGCCTGGTGCAATCACGTTCT | + |
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Preference number: 6 (lower is better) Translates to: VRLPTGPWLRPH*MGQGSLVQSRS Trigger: AGAACGTGATTGCACCAGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | TGTGCTTGGAGTTCAGTAAGGCTTCCCACAGGGCCTTaGCTGAGGCCTCATTGGATGGGGCAAGGCAGCCTG | + |
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Preference number: 6 (lower is better) Translates to: CAWSSVRLPTGP*LRPHWMGQGSL Trigger: CAGGCTGCCTTGCCCCATCCAATGAGGCCTCAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | GTGGCATCCACCTCACCCAAGCTGCTCAGCCTCCTCTaGTCGGGTCTGGCACTGTTAAGAGCGTGGACATCC | + |
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Preference number: 6 (lower is better) Translates to: VASTSPKLLSLL*SGLALLRAWTS Trigger: GGATGTCCACGCTCTTAACAGTGCCAGACCCGACAAGAGGAGGCTGAGCAGCTTGGGTGAGGTGGATGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | TTGGATGGGGCAAGGCAGCCTGGTGCAATCACGTTCTaGTTTTCCTCCACAGCCTGGACAGCAGTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: LDGARQPGAITF*FSSTAWTAVSS Trigger: CGAGCTCACTGCTGTCCAGGCTGTGGAGGAAAACCAGAACGTGATTGCACCAGGCTGCCTTGCCCCATCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 90 bp | CTGGCTGCTTCCACTAGATGTCTCCGAACTTCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAGGCTTCCCACAGGGCCTTGGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: LAASTRCLRTSITAS*CLEFSKASHRALAE Trigger: CTCAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGAAGCAGCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 90 bp | AGCACCATCACCTGGGTTCCTGGCTTCAGAGATGCTACAAGGTCTTaGACCATTTTGGCTTCAGCGACTGTGACGCCGCCCACCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: STITWVPGFRDATRS*TILASATVTPPTTK Trigger: CTTTGTGGTGGGCGGCGTCACAGTCGCTGAAGCCAAAATGGTCAAAGACCTTGTAGCATCTCTGAAGCCAGGAACCCAGGTGATGGTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS GCA 72 bp | GTCAGGTCAACTGCAGAGTCACAGCCTGTGATTTTCTaGAGCAAAGGGGACAGCTCAGACTCCTCAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: VRSTAESQPVIF*SKGDSSDSSER Trigger: CCTCTCTGAGGAGTCTGAGCTGTCCCCTTTGCTGCAGAAAATCACAGGCTGTGACTCTGCAGTTGACCTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CCA 72 bp | GATGTCTCCGAACTTCCATCACTGCCTCTTTGTGCTTaGAGTTCAGTAAGGCTTCCCACAGGGCCTTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DVSELPSLPLCA*SSVRLPTGPWL Trigger: CAGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | ATGAGCTGCCCTGGAGTGACTCTTCCCATACTCATCTaGATGGGCAGGTTCTCTCTGCTGGCTGCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: MSCPGVTLPILI*MGRFSLLAAST Trigger: AGTGGAAGCAGCCAGCAGAGAGAACCTGCCCATCAAGATGAGTATGGGAAGAGTCACTCCAGGGCAGCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | CCTGGCTTCAGAGATGCTACAAGGTCTTTGACCATTTaGGCTTCAGCGACTGTGACGCCGCCCACCACAAAG | + |
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Preference number: 6 (lower is better) Translates to: PGFRDATRSLTI*ASATVTPPTTK Trigger: CTTTGTGGTGGGCGGCGTCACAGTCGCTGAAGCCAAAATGGTCAAAGACCTTGTAGCATCTCTGAAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS CAA 90 bp | ACCTGGGTTCCTGGCTTCAGAGATGCTACAAGGTCTTTGACCATTTaGGCTTCAGCGACTGTGACGCCGCCCACCACAAAGAGGATCAAG | + |
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Preference number: 6 (lower is better) Translates to: TWVPGFRDATRSLTI*ASATVTPPTTKRIK Trigger: CTTGATCCTCTTTGTGGTGGGCGGCGTCACAGTCGCTGAAGCCAAAATGGTCAAAGACCTTGTAGCATCTCTGAAGCCAGGAACCCAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072857.13 |
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| CDS TCA 72 bp | CGTGGGTGTGGCCTGGAAGCTGTGGAAGCACTGACATaGTCTTCTCTACTAAGTTGTCTCCGTGGTGTCCAA | + |
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Preference number: 6 (lower is better) Translates to: RGCGLEAVEALT*SSLLSCLRGVQ Trigger: TTGGACACCACGGAGACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCACAGCTTCCAGGCCACACCCACG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | AGATGTCTCCGAACTTCCATCACTGCCTCTTTGTGCTaGGAGTTCAGTAAGGCTTCCCACAGGGCCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: RCLRTSITASLC*EFSKASHRALA Trigger: AGCCAAGGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | TCCACTAGATGTCTCCGAACTTCCATCACTGCCTCTTaGTGCTTGGAGTTCAGTAAGGCTTCCCACAGGGCC | + |
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Preference number: 6 (lower is better) Translates to: STRCLRTSITAS*CLEFSKASHRA Trigger: GGCCCTGTGGGAAGCCTTACTGAACTCCAAGCACAAAGAGGCAGTGATGGAAGTTCGGAGACATCTAGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 90 bp | TCCAGCGATCTCCCGGAGAGCCATGAAGACATCATTCACAGCAATTaGGGATTTGGGCAACGTCAGGTCAACTGCAGAGTCACAGCCTGT | + |
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Preference number: 6 (lower is better) Translates to: SSDLPESHEDIIHSN*GFGQRQVNCRVTAC Trigger: ACAGGCTGTGACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGATGTCTTCATGGCTCTCCGGGAGATCGCTGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CAA 90 bp | TGGCCTGGAAGCTGTGGAAGCACTGACATGATCTTCTCTACTAAGTaGTCTCCGTGGTGTCCAACCGCTCCTGTGAGATCCAGAGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: WPGSCGSTDMIFSTK*SPWCPTAPVRSRVL Trigger: TAGAACTCTGGATCTCACAGGAGCGGTTGGACACCACGGAGACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCACAGCTTCCAGGCCA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | AGCTGTGGAAGCACTGACATGATCTTCTCTACTAAGTaGTCTCCGTGGTGTCCAACCGCTCCTGTGAGATCC | + |
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Preference number: 6 (lower is better) Translates to: SCGSTDMIFSTK*SPWCPTAPVRS Trigger: GGATCTCACAGGAGCGGTTGGACACCACGGAGACAACTTAGTAGAGAAGATCATGTCAGTGCTTCCACAGCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 72 bp | CTCCCGGAGAGCCATGAAGACATCATTCACAGCAATTaGGGATTTGGGCAACGTCAGGTCAACTGCAGAGTC | + |
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Preference number: 6 (lower is better) Translates to: LPESHEDIIHSN*GFGQRQVNCRV Trigger: GACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGATGTCTTCATGGCTCTCCGGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS TCA 72 bp | CTACTAAGTTGTCTCCGTGGTGTCCAACCGCTCCTGTaGGATCCAGAGTTCTATCCACAAAGACCACAGAAG | + |
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Preference number: 6 (lower is better) Translates to: LLSCLRGVQPLL*DPEFYPQRPQK Trigger: CTTCTGTGGTCTTTGTGGATAGAACTCTGGATCTCACAGGAGCGGTTGGACACCACGGAGACAACTTAGTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS TCA 72 bp | GTTCTCTGGCTTGAGGACTTAATCATTGGCAGCAGCTaGTTTAGCACACCAGCCATGGTTGAATCCCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: VLWLEDLIIGSS*FSTPAMVESPR Trigger: CCTTGGGGATTCAACCATGGCTGGTGTGCTAAATCAGCTGCTGCCAATGATTAAGTCCTCAAGCCAGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS GCA 72 bp | CACAGCAATTTGGGATTTGGGCAACGTCAGGTCAACTaGAGAGTCACAGCCTGTGATTTTCTGCAGCAAAGG | + |
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Preference number: 6 (lower is better) Translates to: HSNLGFGQRQVN*RVTACDFLQQR Trigger: CCTTTGCTGCAGAAAATCACAGGCTGTGACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CCA 72 bp | TTCAAATGCCAGGAAGTTATCCCACTTGGCAGTCTGTaGGTGCTTCAGAGTTTGAACTGTGGCCATCCCAAG | + |
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Preference number: 6 (lower is better) Translates to: FKCQEVIPLGSL*VLQSLNCGHPK Trigger: CTTGGGATGGCCACAGTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGGGATAACTTCCTGGCATTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | GAAGGAGCCTTTCAAATGCCAGGAAGTTATCCCACTTaGCAGTCTGTGGGTGCTTCAGAGTTTGAACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: EGAFQMPGSYPT*QSVGASEFELW Trigger: CCACAGTTCAAACTCTGAAGCACCCACAGACTGCCAAGTGGGATAACTTCCTGGCATTTGAAAGGCTCCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CCA 72 bp | TCCCGGAGAGCCATGAAGACATCATTCACAGCAATTTaGGATTTGGGCAACGTCAGGTCAACTGCAGAGTCA | + |
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Preference number: 6 (lower is better) Translates to: SRRAMKTSFTAI*DLGNVRSTAES Trigger: TGACTCTGCAGTTGACCTGACGTTGCCCAAATCCCAAATTGCTGTGAATGATGTCTTCATGGCTCTCCGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072857.13 ENSMUST00000113542.9 |
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| CDS CCA 72 bp | AGCACTGACATGATCTTCTCTACTAAGTTGTCTCCGTaGTGTCCAACCGCTCCTGTGAGATCCAGAGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: STDMIFSTKLSP*CPTAPVRSRVL Trigger: TAGAACTCTGGATCTCACAGGAGCGGTTGGACACCACGGAGACAACTTAGTAGAGAAGATCATGTCAGTGCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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| CDS CAA 90 bp | AAGCCCACAGTGATTTCTAAGAGCTCTGAGGTTGTTCTTGAAGAGTaGAATATAGGACATGAGCTGCCCTGGAGTGACTCTTCCCATACT | + |
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Preference number: 6 (lower is better) Translates to: KPTVISKSSEVVLEE*NIGHELPWSDSSHT Trigger: AGTATGGGAAGAGTCACTCCAGGGCAGCTCATGTCCTATATTCAACTCTTCAAGAACAACCTCAGAGCTCTTAGAAATCACTGTGGGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072857.13 ENSMUST00000075848.13 ENSMUST00000113542.9 ENSMUST00000151474.3 |
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