Pregenerated sensors for SCART2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000054672Ensembl transcript IDs: ENSMUST00000093984.3, ENSMUST00000164583.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CGACCCCACGTGCCATCCAGGAAGACCTCCACTCGGCCATCACAGTaGCTCTGTCCCTCCCTCAGCCGAAGGGCATCCTGGAGACCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RPHVPSRKTSTRPSQ*LCPSLSRRASWRPE Trigger: CTCAGGTCTCCAGGATGCCCTTCGGCTGAGGGAGGGACAGAGTCACTGTGATGGCCGAGTGGAGGTCTTCCTGGATGGCACGTGGGGTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | GTCTCAATCGTAGACGAGCCCCTTGGCCTGGCCAGCAGTTGCCCTTaGGACCCACAGCCCAGGTGTTCACACAGAACCCTCAGGGAGGCA | + |
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Preference number: 5 (lower is better) Translates to: VSIVDEPLGLASSCP*DPQPRCSHRTLREA Trigger: TGCCTCCCTGAGGGTTCTGTGTGAACACCTGGGCTGTGGGTCCCAAGGGCAACTGCTGGCCAGGCCAAGGGGCTCGTCTACGATTGAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | GCGCACACCAGCATCCTCCTTGTGGGAGCAGTCTCCATATCCCCATaGTTCTGCCTGGCAGGCTCCCAGAGACAGCTCACTGCCTCGGCA | + |
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Preference number: 5 (lower is better) Translates to: AHTSILLVGAVSISP*FCLAGSQRQLTASA Trigger: TGCCGAGGCAGTGAGCTGTCTCTGGGAGCCTGCCAGGCAGAACCATGGGGATATGGAGACTGCTCCCACAAGGAGGATGCTGGTGTGCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CCCAGCCTCCTGACTGGCACTCCCATAGAGCAGCCTCCTCACCCATaGAGCCCAGTTCATCCATCCAGATGCGCCCAGTTCCTGCTCCAA | + |
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Preference number: 5 (lower is better) Translates to: PSLLTGTPIEQPPHP*SPVHPSRCAQFLLQ Trigger: TTGGAGCAGGAACTGGGCGCATCTGGATGGATGAACTGGGCTGCATGGGTGAGGAGGCTGCTCTATGGGAGTGCCAGTCAGGAGGCTGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CAGACAGTCTCAATCGTAGACGAGCCCCTTGGCCTGGCCAGCAGTTaGCCTTGGGACCCACAGCCCAGGTGTTCACACAGAACCCTCAGG | + |
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Preference number: 5 (lower is better) Translates to: QTVSIVDEPLGLASS*PWDPQPRCSHRTLR Trigger: CCTGAGGGTTCTGTGTGAACACCTGGGCTGTGGGTCCCAAGGGCAACTGCTGGCCAGGCCAAGGGGCTCGTCTACGATTGAGACTGTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | AGTATGGATACAGCAGTGCCACACCCCAGCTCCCTACAAACCACGTaGGCCATGGGCAGGTCCAGGTCATCATGGCAGACAGTGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SMDTAVPHPSSLQTT*AMGRSRSSWQTVPQ Trigger: CTGGGGCACTGTCTGCCATGATGACCTGGACCTGCCCATGGCCCACGTGGTTTGTAGGGAGCTGGGGTGTGGCACTGCTGTATCCATACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | TTCCAAAGTGGCCTCCTTGCGGTGTGGCCACTGCATAGCCACAGTTaGGCTGGTGGCAGAGCACAGTGGCATCTGCTAAGTCCCAGTTGG | + |
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Preference number: 5 (lower is better) Translates to: FQSGLLAVWPLHSHS*AGGRAQWHLLSPSW Trigger: CCAACTGGGACTTAGCAGATGCCACTGTGCTCTGCCACCAGCTCAACTGTGGCTATGCAGTGGCCACACCGCAAGGAGGCCACTTTGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | AAGCTCCCCGAGCACACCACTCCTGCATCCCGCAAAGTCCCTGCATaGACCAGCAGAGAAGCAGATACATTGCACTGGGTCAGGTGGGTC | + |
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Preference number: 5 (lower is better) Translates to: KLPEHTTPASRKVPA*TSREADTLHWVRWV Trigger: GACCCACCTGACCCAGTGCAATGTATCTGCTTCTCTGCTGGTTCATGCAGGGACTTTGCGGGATGCAGGAGTGGTGTGCTCGGGGAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | GAACAGTCCCATGCCAGATCTCCTTGGGGGTGCAGTTCCCCAGGCTaGCACGATCAGAGCAGGTACCTGTCTCTGTCTCCAGGCTTCTTG | + |
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Preference number: 5 (lower is better) Translates to: EQSHARSPWGCSSPG*HDQSRYLSLSPGFL Trigger: CAAGAAGCCTGGAGACAGAGACAGGTACCTGCTCTGATCGTGTCAGCCTGGGGAACTGCACCCCCAAGGAGATCTGGCATGGGACTGTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 90 bp | GCAGATACATTGCACTGGGTCAGGTGGGTCTCAGAGCCCAAGCAGTaGACCAGACTCAGCCCCACAGGAATGGTCTTATGGCCTGGTGCT | + |
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Preference number: 5 (lower is better) Translates to: ADTLHWVRWVSEPKQ*TRLSPTGMVLWPGA Trigger: AGCACCAGGCCATAAGACCATTCCTGTGGGGCTGAGTCTGGTGCACTGCTTGGGCTCTGAGACCCACCTGACCCAGTGCAATGTATCTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | GTGCAAGCTCCCCGAGCACACCACTCCTGCATCCCGCAAAGTCCCTaGATGAACCAGCAGAGAAGCAGATACATTGCACTGGGTCAGGTG | + |
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Preference number: 5 (lower is better) Translates to: VQAPRAHHSCIPQSP*MNQQRSRYIALGQV Trigger: CACCTGACCCAGTGCAATGTATCTGCTTCTCTGCTGGTTCATGCAGGGACTTTGCGGGATGCAGGAGTGGTGTGCTCGGGGAGCTTGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CAGGCATGGTCCAGAACTCAGGAACAGGTGGAGGAGCTGAAGAATTaGCGGATGCCATGGTTCCAGGGATACCTAGGCAGCGCACACCAG | + |
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Preference number: 5 (lower is better) Translates to: QAWSRTQEQVEELKN*RMPWFQGYLGSAHQ Trigger: CTGGTGTGCGCTGCCTAGGTATCCCTGGAACCATGGCATCCGGCAATTCTTCAGCTCCTCCACCTGTTCCTGAGTTCTGGACCATGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | CAACGCCAGCCTCCTTCTCATGCAAGTCACATCTCAGGGCAAAATTaGAAGCCCCAGTGGCCTGTGCAGTCCCAGCACAAGGACTGCCAC | + |
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Preference number: 5 (lower is better) Translates to: QRQPPSHASHISGQN*KPQWPVQSQHKDCH Trigger: GTGGCAGTCCTTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGCATGAGAAGGAGGCTGGCGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | AGCTCCCTACAAACCACGTGGGCCATGGGCAGGTCCAGGTCATCATaGCAGACAGTGCCCCAGGTAAGTCCTCTAAGAACCTCTAGGCGT | + |
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Preference number: 5 (lower is better) Translates to: SSLQTTWAMGRSRSS*QTVPQVSPLRTSRR Trigger: ACGCCTAGAGGTTCTTAGAGGACTTACCTGGGGCACTGTCTGCCATGATGACCTGGACCTGCCCATGGCCCACGTGGTTTGTAGGGAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CGTGGGCTCTGGACCATTGCAGAGCAGTGCCACATTCCAACTGTCTaGAGACAACGCCAGCCTCCTTCTCATGCAAGTCACATCTCAGGG | + |
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Preference number: 5 (lower is better) Translates to: RGLWTIAEQCHIPTV*RQRQPPSHASHISG Trigger: CCCTGAGATGTGACTTGCATGAGAAGGAGGCTGGCGTTGTCTGCAGACAGTTGGAATGTGGCACTGCTCTGCAATGGTCCAGAGCCCACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | TCCACAAAGGCCCTGATCCATAGCCAAAGTGGGAACTCCCGAGTATaGATACAGCAGTGCCACACCCCAGCTCCCTACAAACCACGTGGG | + |
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Preference number: 5 (lower is better) Translates to: STKALIHSQSGNSRV*IQQCHTPAPYKPRG Trigger: CCCACGTGGTTTGTAGGGAGCTGGGGTGTGGCACTGCTGTATCCATACTCGGGAGTTCCCACTTTGGCTATGGATCAGGGCCTTTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | ATGGCCACACTGGTGTCCAGGTTCCCTCAGACAATGGAACAGCAGTaGTTCGTTGCCCATACAGCGAAAGGCCTCTGTCCACAAAGGCCC | + |
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Preference number: 5 (lower is better) Translates to: MATLVSRFPQTMEQQ*FVAHTAKGLCPQRP Trigger: GGGCCTTTGTGGACAGAGGCCTTTCGCTGTATGGGCAACGAATCACTGCTGTTCCATTGTCTGAGGGAACCTGGACACCAGTGTGGCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | TGGCTCTGCTATGACACCACTGAACAGCCAGGACCAGAAAGACTATaGCCAAGAGGCAGCCAAGGACCAGACAGGCAATCTCAGGCATGG | + |
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Preference number: 5 (lower is better) Translates to: WLCYDTTEQPGPERL*PRGSQGPDRQSQAW Trigger: CCATGCCTGAGATTGCCTGTCTGGTCCTTGGCTGCCTCTTGGGCATAGTCTTTCTGGTCCTGGCTGTTCAGTGGTGTCATAGCAGAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | CCTTCTCATGCAAGTCACATCTCAGGGCAAAATTGGAAGCCCCAGTaGCCTGTGCAGTCCCAGCACAAGGACTGCCACCATCAACTAGCC | + |
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Preference number: 5 (lower is better) Translates to: PSHASHISGQNWKPQ*PVQSQHKDCHHQLA Trigger: GGCTAGTTGATGGTGGCAGTCCTTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGCATGAGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | ACTGGTGTCCAGGTTCCCTCAGACAATGGAACAGCAGTGATTCGTTaGCCATACAGCGAAAGGCCTCTGTCCACAAAGGCCCTGATCCAT | + |
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Preference number: 5 (lower is better) Translates to: TGVQVPSDNGTAVIR*PYSERPLSTKALIH Trigger: ATGGATCAGGGCCTTTGTGGACAGAGGCCTTTCGCTGTATGGGCAACGAATCACTGCTGTTCCATTGTCTGAGGGAACCTGGACACCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | GTGCTTGTTGGGCAGCTCAGTAAGTGGGGCTCTGTTCCCACACAGTaGAACACATCTGTCCTGATGGGACCTTCCACATTTCCAAAGTGG | + |
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Preference number: 5 (lower is better) Translates to: VLVGQLSKWGSVPTQ*NTSVLMGPSTFPKW Trigger: CCACTTTGGAAATGTGGAAGGTCCCATCAGGACAGATGTGTTTCACTGTGTGGGAACAGAGCCCCACTTACTGAGCTGCCCAACAAGCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | TCTGAGGGGCACTGCCATAAGGACATGTCATGCTTGTCCCTGCACTaGATGGACTTCAACCAGACAGTCTCAATCGTAGACGAGCCCCTT | + |
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Preference number: 5 (lower is better) Translates to: SEGHCHKDMSCLSLH*MDFNQTVSIVDEPL Trigger: AAGGGGCTCGTCTACGATTGAGACTGTCTGGTTGAAGTCCATTCAGTGCAGGGACAAGCATGACATGTCCTTATGGCAGTGCCCCTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CTCACATCAATAAATTCTGAACAGATGACGCCTGCATCCTCCTTGTaGCCACAATCTTGTTGGCCCCAGCCTCCTGACTGGCACTCCCAT | + |
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Preference number: 5 (lower is better) Translates to: LTSINSEQMTPASSL*PQSCWPQPPDWHSH Trigger: ATGGGAGTGCCAGTCAGGAGGCTGGGGCCAACAAGATTGTGGGCACAAGGAGGATGCAGGCGTCATCTGTTCAGAATTTATTGATGTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CAGAGCAGGTACCTGTCTCTGTCTCCAGGCTTCTTGTGGATTCTGTaGATACAACCTGGGTGTAGGTCAGAAGGTCACATTGCTCCAGGA | + |
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Preference number: 5 (lower is better) Translates to: QSRYLSLSPGFLWIL*IQPGCRSEGHIAPG Trigger: TCCTGGAGCAATGTGACCTTCTGACCTACACCCAGGTTGTATGCACAGAATCCACAAGAAGCCTGGAGACAGAGACAGGTACCTGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 90 bp | GACTTCCCTGGTGAGTTTTGGACCATTCCTCATCTTGAAGTAGCATaGAAAGGACTCCTGGTGCTGACACCACCCTTTGCTGTTCCCAGG | + |
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Preference number: 5 (lower is better) Translates to: DFPGEFWTIPHLEVA*KGLLVLTPPFAVPR Trigger: CCTGGGAACAGCAAAGGGTGGTGTCAGCACCAGGAGTCCTTTGCATGCTACTTCAAGATGAGGAATGGTCCAAAACTCACCAGGGAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CATTGTAAAATGTTGGTCTCTGTTCCCTGGCATGTAAGGTACTTCTaGTCCTGGTTCCCGTTAGTTCCATCGTGGGCTCTGGACCATTGC | + |
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Preference number: 5 (lower is better) Translates to: HCKMLVSVPWHVRYF*SWFPLVPSWALDHC Trigger: GCAATGGTCCAGAGCCCACGATGGAACTAACGGGAACCAGGAGCAGAAGTACCTTACATGCCAGGGAACAGAGACCAACATTTTACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 90 bp | CTCTTCTGCATCATCATAATCCTCATCCTGCACTGGACTCTGGGATaGTGCTGGCTCCTCTTTCTCATCCATAGGGACTGTTTCAATGCA | + |
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Preference number: 5 (lower is better) Translates to: LFCIIIILILHWTLG*CWLLFLIHRDCFNA Trigger: TGCATTGAAACAGTCCCTATGGATGAGAAAGAGGAGCCAGCAGCATCCCAGAGTCCAGTGCAGGATGAGGATTATGATGATGCAGAAGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 90 bp | CCTGGGTGTAAGATTGAAGGTCGCACTGCTCTGCAAAGTTCACATTaGTCTTGCAGTAGAAAATGTCAGCCTCTGTTCCTTGGCAAGACA | + |
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Preference number: 5 (lower is better) Translates to: PGCKIEGRTALQSSH*SCSRKCQPLFLGKT Trigger: TGTCTTGCCAAGGAACAGAGGCTGACATTTTCTACTGCAAGATCAATGTGAACTTTGCAGAGCAGTGCGACCTTCAATCTTACACCCAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 90 bp | GCAGTTGGCAATCTGCTCCATATCCTGAGAAACTTCTGTCTTTTCTaGACATGCCAACCAAGCTTCCTCGCCTCTAAGACAAGAATGTCT | + |
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Preference number: 5 (lower is better) Translates to: AVGNLLHILRNFCLF*TCQPSFLASKTRMS Trigger: AGACATTCTTGTCTTAGAGGCGAGGAAGCTTGGTTGGCATGTGCAGAAAAGACAGAAGTTTCTCAGGATATGGAGCAGATTGCCAACTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 90 bp | CTTGGCAAGACACGAATTTCTGTTCTTGACTTCCCTGGTGAGTTTTaGACCATTCCTCATCTTGAAGTAGCATGCAAAGGACTCCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: LGKTRISVLDFPGEF*TIPHLEVACKGLLV Trigger: CACCAGGAGTCCTTTGCATGCTACTTCAAGATGAGGAATGGTCCAAAACTCACCAGGGAAGTCAAGAACAGAAATTCGTGTCTTGCCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CCACAGCCGAGCTCTCTGCAGATCACTGAGGCCTCCTaGATGCCCAGGCCGTCTGCACACATAAGGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: PQPSSLQITEAS*MPRPSAHIRPH Trigger: GTGGGGCCTTATGTGTGCAGACGGCCTGGGCATGCAGGAGGCCTCAGTGATCTGCAGAGAGCTCGGCTGTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | GCAGCCCAGTTCATCCATCCAGATGCGCCCAGTTCCTaGTCCAAAGTGGGCAGCCCTAGGGGCACTGAGGGC | + |
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Preference number: 6 (lower is better) Translates to: AAQFIHPDAPSS*SKVGSPRGTEG Trigger: GCCCTCAGTGCCCCTAGGGCTGCCCACTTTGGAGCAGGAACTGGGCGCATCTGGATGGATGAACTGGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | GTGCCATCCAGGAAGACCTCCACTCGGCCATCACAGTaGCTCTGTCCCTCCCTCAGCCGAAGGGCATCCTGG | + |
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Preference number: 6 (lower is better) Translates to: VPSRKTSTRPSQ*LCPSLSRRASW Trigger: CCAGGATGCCCTTCGGCTGAGGGAGGGACAGAGTCACTGTGATGGCCGAGTGGAGGTCTTCCTGGATGGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | GCAGGTCCCATGCACTGTCCAGCACACGACCCCACGTaGCATCCAGGAAGACCTCCACTCGGCCATCACAGT | + |
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Preference number: 6 (lower is better) Translates to: AGPMHCPAHDPT*HPGRPPLGHHS Trigger: ACTGTGATGGCCGAGTGGAGGTCTTCCTGGATGGCACGTGGGGTCGTGTGCTGGACAGTGCATGGGACCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | CCAGACAGTCTCAATCGTAGACGAGCCCCTTGGCCTGGCCAGCAGTaGCCCTTGGGACCCACAGCCCAGGTGTTCACACAGAACCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: PDSLNRRRAPWPGQQ*PLGPTAQVFTQNPQ Trigger: CTGAGGGTTCTGTGTGAACACCTGGGCTGTGGGTCCCAAGGGCAACTGCTGGCCAGGCCAAGGGGCTCGTCTACGATTGAGACTGTCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | CTTCACAGAGCCACAGCCGAGCTCTCTGCAGATCACTaGGGCCTCCTGCATGCCCAGGCCGTCTGCACACAT | + |
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Preference number: 6 (lower is better) Translates to: LHRATAELSADH*GLLHAQAVCTH Trigger: ATGTGTGCAGACGGCCTGGGCATGCAGGAGGCCTCAGTGATCTGCAGAGAGCTCGGCTGTGGCTCTGTGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | ATGGTTCTGCCTGGCAGGCTCCCAGAGACAGCTCACTaGCTCGGCATCCCACTTCATCCAGCCATACAGGCC | + |
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Preference number: 6 (lower is better) Translates to: MVLPGRLPETAH*LGIPLHPAIQA Trigger: GGCCTGTATGGCTGGATGAAGTGGGATGCCGAGGCAGTGAGCTGTCTCTGGGAGCCTGCCAGGCAGAACCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CTCCTTGTGGGAGCAGTCTCCATATCCCCATGGTTCTaGCTGGCAGGCTCCCAGAGACAGCTCACTGCCTCG | + |
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Preference number: 6 (lower is better) Translates to: LLVGAVSISPWF*LAGSQRQLTAS Trigger: CGAGGCAGTGAGCTGTCTCTGGGAGCCTGCCAGGCAGAACCATGGGGATATGGAGACTGCTCCCACAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | ACAGCAGTGCCACACCCCAGCTCCCTACAAACCACGTaGGCCATGGGCAGGTCCAGGTCATCATGGCAGACA | + |
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Preference number: 6 (lower is better) Translates to: TAVPHPSSLQTT*AMGRSRSSWQT Trigger: TGTCTGCCATGATGACCTGGACCTGCCCATGGCCCACGTGGTTTGTAGGGAGCTGGGGTGTGGCACTGCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | GCCATGGTTCCAGGGATACCTAGGCAGCGCACACCAGCATCCTCCTaGTGGGAGCAGTCTCCATATCCCCATGGTTCTGCCTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: AMVPGIPRQRTPASS*WEQSPYPHGSAWQA Trigger: AGCCTGCCAGGCAGAACCATGGGGATATGGAGACTGCTCCCACAAGGAGGATGCTGGTGTGCGCTGCCTAGGTATCCCTGGAACCATGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CTGACTGGCACTCCCATAGAGCAGCCTCCTCACCCATaGAGCCCAGTTCATCCATCCAGATGCGCCCAGTTC | + |
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Preference number: 6 (lower is better) Translates to: LTGTPIEQPPHP*SPVHPSRCAQF Trigger: GAACTGGGCGCATCTGGATGGATGAACTGGGCTGCATGGGTGAGGAGGCTGCTCTATGGGAGTGCCAGTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | TTGTGCCCACAATCTTGTTGGCCCCAGCCTCCTGACTaGCACTCCCATAGAGCAGCCTCCTCACCCATGCAG | + |
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Preference number: 6 (lower is better) Translates to: LCPQSCWPQPPD*HSHRAASSPMQ Trigger: CTGCATGGGTGAGGAGGCTGCTCTATGGGAGTGCCAGTCAGGAGGCTGGGGCCAACAAGATTGTGGGCACAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | GGGATACCTAGGCAGCGCACACCAGCATCCTCCTTGTaGGAGCAGTCTCCATATCCCCATGGTTCTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: GIPRQRTPASSL*EQSPYPHGSAW Trigger: CCAGGCAGAACCATGGGGATATGGAGACTGCTCCCACAAGGAGGATGCTGGTGTGCGCTGCCTAGGTATCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | TCAAAGGCCACAGCCCAAGAGAGAACAGTCCCATGCCAGATCTCCTaGGGGGTGCAGTTCCCCAGGCTGACACGATCAGAGCAGGTACCT | + |
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Preference number: 6 (lower is better) Translates to: SKATAQERTVPCQIS*GVQFPRLTRSEQVP Trigger: AGGTACCTGCTCTGATCGTGTCAGCCTGGGGAACTGCACCCCCAAGGAGATCTGGCATGGGACTGTTCTCTCTTGGGCTGTGGCCTTTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS TCA 72 bp | AAAGCTCCACGCGGCCCTCACAGCGGCTGCTGCCATTaGCCAGTCGGAACTTTTCCCCTGAGCAGATTAGTG | + |
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Preference number: 6 (lower is better) Translates to: KAPRGPHSGCCH*PVGTFPLSRLV Trigger: CACTAATCTGCTCAGGGGAAAAGTTCCGACTGGTCAATGGCAGCAGCCGCTGTGAGGGCCGCGTGGAGCTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | CATGCCAGATCTCCTTGGGGGTGCAGTTCCCCAGGCTaGCACGATCAGAGCAGGTACCTGTCTCTGTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: HARSPWGCSSPG*HDQSRYLSLSP Trigger: TGGAGACAGAGACAGGTACCTGCTCTGATCGTGTCAGCCTGGGGAACTGCACCCCCAAGGAGATCTGGCATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 72 bp | TTGCACTGGGTCAGGTGGGTCTCAGAGCCCAAGCAGTaGACCAGACTCAGCCCCACAGGAATGGTCTTATGG | + |
|
Preference number: 6 (lower is better) Translates to: LHWVRWVSEPKQ*TRLSPTGMVLW Trigger: CCATAAGACCATTCCTGTGGGGCTGAGTCTGGTGCACTGCTTGGGCTCTGAGACCCACCTGACCCAGTGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | GTACACCACCTAGCAGCCGGGCTTCCACGTGACCTGTaGACACCACCTGGGTGTAAGATTGAAGGTCGCACT | + |
|
Preference number: 6 (lower is better) Translates to: VHHLAAGLPRDL*TPPGCKIEGRT Trigger: AGTGCGACCTTCAATCTTACACCCAGGTGGTGTGCACAGGTCACGTGGAAGCCCGGCTGCTAGGTGGTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS CCA 72 bp | TGGTCCCCCAGGACCCCAGACGGCACTCCAAGAAGGTaGATTCATTGCCATGGCACTGGGCATCATATAGCC | + |
|
Preference number: 6 (lower is better) Translates to: WSPRTPDGTPRR*IHCHGTGHHIA Trigger: GGCTATATGATGCCCAGTGCCATGGCAATGAATCCACCTTCTTGGAGTGCCGTCTGGGGTCCTGGGGGACCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | CAAACCACGTGGGCCATGGGCAGGTCCAGGTCATCATaGCAGACAGTGCCCCAGGTAAGTCCTCTAAGAACC | + |
|
Preference number: 6 (lower is better) Translates to: QTTWAMGRSRSS*QTVPQVSPLRT Trigger: GGTTCTTAGAGGACTTACCTGGGGCACTGTCTGCCATGATGACCTGGACCTGCCCATGGCCCACGTGGTTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | AGCCCAAGCAGTGCACCAGACTCAGCCCCACAGGAATaGTCTTATGGCCTGGTGCTGGCGCATCATAGGCTA | + |
|
Preference number: 6 (lower is better) Translates to: SPSSAPDSAPQE*SYGLVLAHHRL Trigger: TAGCCTATGATGCGCCAGCACCAGGCCATAAGACCATTCCTGTGGGGCTGAGTCTGGTGCACTGCTTGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | AGCATCCTCCTTGTGGGAGCAGTCTCCATATCCCCATaGTTCTGCCTGGCAGGCTCCCAGAGACAGCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: SILLVGAVSISP*FCLAGSQRQLT Trigger: AGTGAGCTGTCTCTGGGAGCCTGCCAGGCAGAACCATGGGGATATGGAGACTGCTCCCACAAGGAGGATGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | ACAACGCCAGCCTCCTTCTCATGCAAGTCACATCTCAGGGCAAAATaGGAAGCCCCAGTGGCCTGTGCAGTCCCAGCACAAGGACTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TTPASFSCKSHLRAK*EAPVACAVPAQGLP Trigger: TGGCAGTCCTTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGCATGAGAAGGAGGCTGGCGTTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | CACATCTGTCCTGATGGGACCTTCCACATTTCCAAAGTGGCCTCCTaGCGGTGTGGCCACTGCATAGCCACAGTTGAGCTGGTGGCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: HICPDGTFHISKVAS*RCGHCIATVELVAE Trigger: CTCTGCCACCAGCTCAACTGTGGCTATGCAGTGGCCACACCGCAAGGAGGCCACTTTGGAAATGTGGAAGGTCCCATCAGGACAGATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | AAGCCCCAGTGGCCTGTGCAGTCCCAGCACAAGGACTaGCACCATCAACTAGCCCCATTTGTAGTGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: KPQWPVQSQHKD*HHQLAPFVVWY Trigger: GTACCACACTACAAATGGGGCTAGTTGATGGTGGCAGTCCTTGTGCTGGGACTGCACAGGCCACTGGGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CCCCGAGCACACCACTCCTGCATCCCGCAAAGTCCCTaGATGAACCAGCAGAGAAGCAGATACATTGCACTG | + |
|
Preference number: 6 (lower is better) Translates to: PRAHHSCIPQSP*MNQQRSRYIAL Trigger: CAGTGCAATGTATCTGCTTCTCTGCTGGTTCATGCAGGGACTTTGCGGGATGCAGGAGTGGTGTGCTCGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | GCAAGTCACATCTCAGGGCAAAATTGGAAGCCCCAGTaGCCTGTGCAGTCCCAGCACAAGGACTGCCACCAT | + |
|
Preference number: 6 (lower is better) Translates to: ASHISGQNWKPQ*PVQSQHKDCHH Trigger: ATGGTGGCAGTCCTTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | ACCAGCAGAGAAGCAGATACATTGCACTGGGTCAGGTaGGTCTCAGAGCCCAAGCAGTGCACCAGACTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TSREADTLHWVR*VSEPKQCTRLS Trigger: GCTGAGTCTGGTGCACTGCTTGGGCTCTGAGACCCACCTGACCCAGTGCAATGTATCTGCTTCTCTGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | AGAGGCAGCCAAGGACCAGACAGGCAATCTCAGGCATaGTCCAGAACTCAGGAACAGGTGGAGGAGCTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RGSQGPDRQSQA*SRTQEQVEELK Trigger: CTTCAGCTCCTCCACCTGTTCCTGAGTTCTGGACCATGCCTGAGATTGCCTGTCTGGTCCTTGGCTGCCTCT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | GGTGCCCAGCCTCCATATCTTCCCCCGGGCTGTCCTTaGGCTCTTCTGCATCATCATAATCCTCATCCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: GAQPPYLPPGCP*ALLHHHNPHPA Trigger: TGCAGGATGAGGATTATGATGATGCAGAAGAGCCCAAGGACAGCCCGGGGGAAGATATGGAGGCTGGGCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 72 bp | CCTGATGGGACCTTCCACATTTCCAAAGTGGCCTCCTaGCGGTGTGGCCACTGCATAGCCACAGTTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PDGTFHISKVAS*RCGHCIATVEL Trigger: CAGCTCAACTGTGGCTATGCAGTGGCCACACCGCAAGGAGGCCACTTTGGAAATGTGGAAGGTCCCATCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | GCCCATACAGCGAAAGGCCTCTGTCCACAAAGGCCCTaGTCCATAGCCAAAGTGGGAACTCCCGAGTATGGA | + |
|
Preference number: 6 (lower is better) Translates to: AHTAKGLCPQRP*SIAKVGTPEYG Trigger: TCCATACTCGGGAGTTCCCACTTTGGCTATGGATCAGGGCCTTTGTGGACAGAGGCCTTTCGCTGTATGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | GAGCACACCACTCCTGCATCCCGCAAAGTCCCTGCATaGACCAGCAGAGAAGCAGATACATTGCACTGGGTC | + |
|
Preference number: 6 (lower is better) Translates to: EHTTPASRKVPA*TSREADTLHWV Trigger: GACCCAGTGCAATGTATCTGCTTCTCTGCTGGTTCATGCAGGGACTTTGCGGGATGCAGGAGTGGTGTGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | AGGACCCCAGACGGCACTCCAAGAAGGTGGATTCATTaGCATGGCACTGGGCATCATATAGCCAAGGTTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RTPDGTPRRWIH*HGTGHHIAKVA Trigger: GGCAACCTTGGCTATATGATGCCCAGTGCCATGGCAATGAATCCACCTTCTTGGAGTGCCGTCTGGGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | GTACACCACCTAGCAGCCGGGCTTCCACGTGACCTGTaGATACAACCTGGGTGTAGGTCAGAAGGTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: VHHLAAGLPRDL*IQPGCRSEGHI Trigger: AATGTGACCTTCTGACCTACACCCAGGTTGTATGCACAGGTCACGTGGAAGCCCGGCTGCTAGGTGGTGTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000093984.3 |
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| CDS CCA 72 bp | CCTCCTTCTCATGCAAGTCACATCTCAGGGCAAAATTaGAAGCCCCAGTGGCCTGTGCAGTCCCAGCACAAG | + |
|
Preference number: 6 (lower is better) Translates to: PPSHASHISGQN*KPQWPVQSQHK Trigger: CTTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGCATGAGAAGGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | AGGTACTTCTGCTCCTGGTTCCCGTTAGTTCCATCGTaGGCTCTGGACCATTGCAGAGCAGTGCCACATTCC | + |
|
Preference number: 6 (lower is better) Translates to: RYFCSWFPLVPS*ALDHCRAVPHS Trigger: GGAATGTGGCACTGCTCTGCAATGGTCCAGAGCCCACGATGGAACTAACGGGAACCAGGAGCAGAAGTACCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 72 bp | CAGGACCCCAGACGGCACTCCAAGAAGGTGGATTCATaGCCATGGCACTGGGCATCATATAGCCAAGGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: QDPRRHSKKVDS*PWHWASYSQGC Trigger: GCAACCTTGGCTATATGATGCCCAGTGCCATGGCAATGAATCCACCTTCTTGGAGTGCCGTCTGGGGTCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 72 bp | GCCTCCTTCTCATGCAAGTCACATCTCAGGGCAAAATaGGAAGCCCCAGTGGCCTGTGCAGTCCCAGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: ASFSCKSHLRAK*EAPVACAVPAQ Trigger: TTGTGCTGGGACTGCACAGGCCACTGGGGCTTCCAATTTTGCCCTGAGATGTGACTTGCATGAGAAGGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 72 bp | CTGGTTCCCGTTAGTTCCATCGTGGGCTCTGGACCATaGCAGAGCAGTGCCACATTCCAACTGTCTGCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LVPVSSIVGSGP*QSSATFQLSAD Trigger: GTCTGCAGACAGTTGGAATGTGGCACTGCTCTGCAATGGTCCAGAGCCCACGATGGAACTAACGGGAACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS TCA 72 bp | CTGGTGTCCAGGTTCCCTCAGACAATGGAACAGCAGTaGTTCGTTGCCCATACAGCGAAAGGCCTCTGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LVSRFPQTMEQQ*FVAHTAKGLCP Trigger: TGGACAGAGGCCTTTCGCTGTATGGGCAACGAATCACTGCTGTTCCATTGTCTGAGGGAACCTGGACACCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | TGGACCATTGCAGAGCAGTGCCACATTCCAACTGTCTaGAGACAACGCCAGCCTCCTTCTCATGCAAGTCAC | + |
|
Preference number: 6 (lower is better) Translates to: WTIAEQCHIPTV*RQRQPPSHASH Trigger: GTGACTTGCATGAGAAGGAGGCTGGCGTTGTCTGCAGACAGTTGGAATGTGGCACTGCTCTGCAATGGTCCA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CAGGTTCCCTCAGACAATGGAACAGCAGTGATTCGTTaGCCATACAGCGAAAGGCCTCTGTCCACAAAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QVPSDNGTAVIR*PYSERPLSTKA Trigger: GGCCTTTGTGGACAGAGGCCTTTCGCTGTATGGGCAACGAATCACTGCTGTTCCATTGTCTGAGGGAACCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | CTCCATATCTTCCCCCGGGCTGTCCTTGGGCTCTTCTaGATCATCATAATCCTCATCCTGCACTGGACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LHIFPRAVLGLF*IIIILILHWTL Trigger: CAGAGTCCAGTGCAGGATGAGGATTATGATGATGCAGAAGAGCCCAAGGACAGCCCGGGGGAAGATATGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | CCCAGACGGCACTCCAAGAAGGTGGATTCATTGCCATaGCACTGGGCATCATATAGCCAAGGTTGCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: PRRHSKKVDSLP*HWASYSQGCLI Trigger: GATGAGGCAACCTTGGCTATATGATGCCCAGTGCCATGGCAATGAATCCACCTTCTTGGAGTGCCGTCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 90 bp | CAGCCGGGCTTCCACGTGACCTGTGCACACCACCTGGGTGTAAGATaGAAGGTCGCACTGCTCTGCAAAGTTCACATTGATCTTGCAGTA | + |
|
Preference number: 6 (lower is better) Translates to: QPGFHVTCAHHLGVR*KVALLCKVHIDLAV Trigger: TACTGCAAGATCAATGTGAACTTTGCAGAGCAGTGCGACCTTCAATCTTACACCCAGGTGGTGTGCACAGGTCACGTGGAAGCCCGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS TCA 72 bp | GGGCAGCTCAGTAAGTGGGGCTCTGTTCCCACACAGTaGAACACATCTGTCCTGATGGGACCTTCCACATTT | + |
|
Preference number: 6 (lower is better) Translates to: GQLSKWGSVPTQ*NTSVLMGPSTF Trigger: AAATGTGGAAGGTCCCATCAGGACAGATGTGTTTCACTGTGTGGGAACAGAGCCCCACTTACTGAGCTGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | ATGTTGGTCTCTGTTCCCTGGCATGTAAGGTACTTCTaGTCCTGGTTCCCGTTAGTTCCATCGTGGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: MLVSVPWHVRYF*SWFPLVPSWAL Trigger: CAGAGCCCACGATGGAACTAACGGGAACCAGGAGCAGAAGTACCTTACATGCCAGGGAACAGAGACCAACAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | ATAAATTCTGAACAGATGACGCCTGCATCCTCCTTGTaGCCACAATCTTGTTGGCCCCAGCCTCCTGACTGG | + |
|
Preference number: 6 (lower is better) Translates to: INSEQMTPASSL*PQSCWPQPPDW Trigger: CCAGTCAGGAGGCTGGGGCCAACAAGATTGTGGGCACAAGGAGGATGCAGGCGTCATCTGTTCAGAATTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | TATGACACCACTGAACAGCCAGGACCAGAAAGACTATaGCCAAGAGGCAGCCAAGGACCAGACAGGCAATCT | + |
|
Preference number: 6 (lower is better) Translates to: YDTTEQPGPERL*PRGSQGPDRQS Trigger: AGATTGCCTGTCTGGTCCTTGGCTGCCTCTTGGGCATAGTCTTTCTGGTCCTGGCTGTTCAGTGGTGTCATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | TCATGGCCACACTGGTGTCCAGGTTCCCTCAGACAATaGAACAGCAGTGATTCGTTGCCCATACAGCGAAAG | + |
|
Preference number: 6 (lower is better) Translates to: SWPHWCPGSLRQ*NSSDSLPIQRK Trigger: CTTTCGCTGTATGGGCAACGAATCACTGCTGTTCCATTGTCTGAGGGAACCTGGACACCAGTGTGGCCATGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CCA 72 bp | CAGAGCAGGTACCTGTCTCTGTCTCCAGGCTTCTTGTaGATTCTGTGCATACAACCTGGGTGTAGGTCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QSRYLSLSPGFL*ILCIQPGCRSE Trigger: TTCTGACCTACACCCAGGTTGTATGCACAGAATCCACAAGAAGCCTGGAGACAGAGACAGGTACCTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 72 bp | GGTGAGTTTTGGACCATTCCTCATCTTGAAGTAGCATaGAAAGGACTCCTGGTGCTGACACCACCCTTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: GEFWTIPHLEVA*KGLLVLTPPFA Trigger: AGCAAAGGGTGGTGTCAGCACCAGGAGTCCTTTGCATGCTACTTCAAGATGAGGAATGGTCCAAAACTCACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS CAA 72 bp | TTCCACGTGACCTGTGCACACCACCTGGGTGTAAGATaGAAGGTCGCACTGCTCTGCAAAGTTCACATTGAT | + |
|
Preference number: 6 (lower is better) Translates to: FHVTCAHHLGVR*KVALLCKVHID Trigger: ATCAATGTGAACTTTGCAGAGCAGTGCGACCTTCAATCTTACACCCAGGTGGTGTGCACAGGTCACGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS TCA 72 bp | CACTGCCATAAGGACATGTCATGCTTGTCCCTGCACTaGATGGACTTCAACCAGACAGTCTCAATCGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: HCHKDMSCLSLH*MDFNQTVSIVD Trigger: GTCTACGATTGAGACTGTCTGGTTGAAGTCCATTCAGTGCAGGGACAAGCATGACATGTCCTTATGGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS GCA 72 bp | TACCTGTCTCTGTCTCCAGGCTTCTTGTGGATTCTGTaGATACAACCTGGGTGTAGGTCAGAAGGTCACATT | + |
|
Preference number: 6 (lower is better) Translates to: YLSLSPGFLWIL*IQPGCRSEGHI Trigger: AATGTGACCTTCTGACCTACACCCAGGTTGTATGCACAGAATCCACAAGAAGCCTGGAGACAGAGACAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS CCA 72 bp | ATAATCCTCATCCTGCACTGGACTCTGGGATGCTGCTaGCTCCTCTTTCTCATCCATAGGGACTGTTTCAAT | + |
|
Preference number: 6 (lower is better) Translates to: IILILHWTLGCC*LLFLIHRDCFN Trigger: ATTGAAACAGTCCCTATGGATGAGAAAGAGGAGCCAGCAGCATCCCAGAGTCCAGTGCAGGATGAGGATTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
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| CDS CAA 72 bp | AGCCTCTGTTCCTTGGCAAGACACGAATTTCTGTTCTaGACTTCCCTGGTGAGTTTTGGACCATTCCTCATC | + |
|
Preference number: 6 (lower is better) Translates to: SLCSLARHEFLF*TSLVSFGPFLI Trigger: GATGAGGAATGGTCCAAAACTCACCAGGGAAGTCAAGAACAGAAATTCGTGTCTTGCCAAGGAACAGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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| CDS GCA 72 bp | AATCTGCTCCATATCCTGAGAAACTTCTGTCTTTTCTaGACATGCCAACCAAGCTTCCTCGCCTCTAAGACA | + |
|
Preference number: 6 (lower is better) Translates to: NLLHILRNFCLF*TCQPSFLASKT Trigger: TGTCTTAGAGGCGAGGAAGCTTGGTTGGCATGTGCAGAAAAGACAGAAGTTTCTCAGGATATGGAGCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
||
| CDS CCA 72 bp | TTGATCAGGCATTGTAAAATGTTGGTCTCTGTTCCCTaGCATGTAAGGTACTTCTGCTCCTGGTTCCCGTTA | + |
|
Preference number: 6 (lower is better) Translates to: LIRHCKMLVSVP*HVRYFCSWFPL Trigger: TAACGGGAACCAGGAGCAGAAGTACCTTACATGCCAGGGAACAGAGACCAACATTTTACAATGCCTGATCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
||
| CDS CAA 72 bp | TCCAGGACGTTCACATTGATCAGGCATTGTAAAATGTaGGTCTCTGTTCCCTGGCATGTAAGGTACTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SRTFTLIRHCKM*VSVPWHVRYFC Trigger: GCAGAAGTACCTTACATGCCAGGGAACAGAGACCAACATTTTACAATGCCTGATCAATGTGAACGTCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
||
| CDS CCA 72 bp | GGTCCCATTGTAGAAAACTTCCAGTCGTCCTGTGCATaGCTGACTATGTTCTTGCAACCTCACATCAATAAA | + |
|
Preference number: 6 (lower is better) Translates to: GPIVENFQSSCA*LTMFLQPHINK Trigger: TTTATTGATGTGAGGTTGCAAGAACATAGTCAGCCATGCACAGGACGACTGGAAGTTTTCTACAATGGGACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000093984.3 ENSMUST00000164583.8 |
||
| CDS TCA 72 bp | AAGATTGAAGGTCGCACTGCTCTGCAAAGTTCACATTaGTCTTGCAGTAGAAAATGTCAGCCTCTGTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: KIEGRTALQSSH*SCSRKCQPLFL Trigger: AAGGAACAGAGGCTGACATTTTCTACTGCAAGATCAATGTGAACTTTGCAGAGCAGTGCGACCTTCAATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000164583.8 |
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