Pregenerated sensors for SCART1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025461Ensembl transcript IDs: ENSMUST00000084460.7, ENSMUST00000209398.2, ENSMUST00000209637.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | GCCCGCAGCCAGCCTCACGCGCAGGCTCCCGGAGCACACCACTCCTaGGTCACGCAAGGTCCCAGCAGGCACCAGCAGGGACGTAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: ARSQPHAQAPGAHHS*VTQGPSRHQQGRRN Trigger: GTTTCTACGTCCCTGCTGGTGCCTGCTGGGACCTTGCGTGACGCAGGAGTGGTGTGCTCCGGGAGCCTGCGCGTGAGGCTGGCTGCGGGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | TCGTGGAGACACCCGCACAGCGAACACCTGCATCCTCCTTGTGCGTaGAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: SWRHPHSEHLHPPCA*SLHVPRAQPGRPPG Trigger: CCCTGGAGGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GTGGTCGTGGAGACACCCGCACAGCGAACACCTGCATCCTCCTTGTaGGTGCAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: VVVETPAQRTPASSL*VQSPCPQGSAWQAS Trigger: GGAGGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GCTGTGCCTTCACCGCACAGCGAACACCTGCATCCTCCTTGTGCGTaGAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCCTCCAGGG | + |
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Preference number: 5 (lower is better) Translates to: AVPSPHSEHLHPPCA*SLHVPRAQPGRPPG Trigger: CCCTGGAGGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGTGAAGGCACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209398.2 |
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| CDS GCA 90 bp | GACGGCTGTGCCTTCACCGCACAGCGAACACCTGCATCCTCCTTGTaGGTGCAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCCTCC | + |
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Preference number: 5 (lower is better) Translates to: DGCAFTAQRTPASSL*VQSPCPQGSAWQAS Trigger: GGAGGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGTGAAGGCACAGCCGTC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209398.2 |
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| CDS GCA 90 bp | GGGACTGTGGCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCATTTaGACAGAGAGCCACCACCACCCACTCATGGGGGCAAGCACGCTG | + |
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Preference number: 5 (lower is better) Translates to: GTVALHQPDLPEGAI*TESHHHPLMGASTL Trigger: CAGCGTGCTTGCCCCCATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | GCATCCTCCTTGTGCGTGCAGTCTCCATGTCCCCAGGGCTCAGCCTaGCAGGCCTCCAGGGTCACCTCACTGCCAAGGCACTCGACCTCA | + |
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Preference number: 5 (lower is better) Translates to: ASSLCVQSPCPQGSA*QASRVTSLPRHSTS Trigger: TGAGGTCGAGTGCCTTGGCAGTGAGGTGACCCTGGAGGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | CTGCACAGGGACTGTGGCCCTTCACCAGCCGGATCTCCCGGAAGGTaGCATTTGCACAGAGAGCCACCACCACCCACTCATGGGGGCAAG | + |
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Preference number: 5 (lower is better) Translates to: LHRDCGPSPAGSPGR*HLHREPPPPTHGGK Trigger: CTTGCCCCCATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | CGCAAGGTCCCAGCAGGCACCAGCAGGGACGTAGAAACATTGCAATaGACCAGGCGAGTCTCAGAGCCCAGGCAGCGCACCTGGCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: RKVPAGTSRDVETLQ*TRRVSEPRQRTWLS Trigger: GCTGAGCCAGGTGCGCTGCCTGGGCTCTGAGACTCGCCTGGTGCATTGCAATGTTTCTACGTCCCTGCTGGTGCCTGCTGGGACCTTGCG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | TGTGCAGCCAGGGCCGGACCATCTCTCCAGGCAGGGGTACATATTTaGGAGCACCCACAGCAGGGCCACAGCCCAGCTGTCTACACACCA | + |
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Preference number: 5 (lower is better) Translates to: CAARAGPSLQAGVHI*EHPQQGHSPAVYTP Trigger: TGGTGTGTAGACAGCTGGGCTGTGGCCCTGCTGTGGGTGCTCCCAAATATGTACCCCTGCCTGGAGAGATGGTCCGGCCCTGGCTGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | GGCACACCACATGGGCTGTGGGCAAGTCCAGATCAGCATGGCAGATaGTACCCCAGGTCAGTCCCCGAAGAACCTCCAGGCGTCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: GTPHGLWASPDQHGR*YPRSVPEEPPGVQH Trigger: GTGCTGGACGCCTGGAGGTTCTTCGGGGACTGACCTGGGGTACCATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | CGGCAACCGATGGAGGGGTCAGGGAAGGAGACAATGCAGTGGTCGTaGAGACACCCGCACAGCGAACACCTGCATCCTCCTTGTGCGTGC | + |
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Preference number: 5 (lower is better) Translates to: RQPMEGSGKETMQWS*RHPHSEHLHPPCAC Trigger: GCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS TCA 90 bp | CCTCCACATGCAGGCCACAGAGGCGGTCCACCCCATTCACATTCATaGTCTCAGGGAGTCCTGCACAGGGACTGTGGCCCTTCACCAGCC | + |
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Preference number: 5 (lower is better) Translates to: PPHAGHRGGPPHSHS*SQGVLHRDCGPSPA Trigger: GGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGTGAATGGGGTGGACCGCCTCTGTGGCCTGCATGTGGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS TCA 90 bp | CACACGGCCTTCACAGTCACTGCTGCCATTGACCAGCCGGAACTCTaGGCAGGTGAGTGCAGCATCCTGCTCGTGGCCACAGTGGTGACC | + |
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Preference number: 5 (lower is better) Translates to: HTAFTVTAAIDQPEL*AGECSILLVATVVT Trigger: GGTCACCACTGTGGCCACGAGCAGGATGCTGCACTCACCTGCTCAGAGTTCCGGCTGGTCAATGGCAGCAGTGACTGTGAAGGCCGTGTG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GAGAGCCACCACCACCCACTCATGGGGGCAAGCACGCTGACTCCATaGCCCAAGGCTACACTCCCAGAGAGAGGACTCATTGCCCCAACA | + |
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Preference number: 5 (lower is better) Translates to: ESHHHPLMGASTLTP*PKATLPERGLIAPT Trigger: TGTTGGGGCAATGAGTCCTCTCTCTGGGAGTGTAGCCTTGGGGCATGGAGTCAGCGTGCTTGCCCCCATGAGTGGGTGGTGGTGGCTCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS TCA 90 bp | CACACCACAGAGGCCTCTGCCAGTGTCCACTCCAGGTTGCACAGGTaGCCCCATTCCCCTTGGTGTCGAACCAGCACCACTCCGTCACAT | + |
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Preference number: 5 (lower is better) Translates to: HTTEASASVHSRLHR*PHSPWCRTSTTPSH Trigger: ATGTGACGGAGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACACTGGCAGAGGCCTCTGTGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GCTGTCTACACACCACAGAGGCCTCTGCCAGTGTCCACTCCAGGTTaGACAGGTGACCCCATTCCCCTTGGTGTCGAACCAGCACCACTC | + |
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Preference number: 5 (lower is better) Translates to: AVYTPQRPLPVSTPG*TGDPIPLGVEPAPL Trigger: GAGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACACTGGCAGAGGCCTCTGTGGTGTGTAGACAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | ACAGAGGCGGTCCACCCCATTCACATTCATGATCTCAGGGAGTCCTaGACAGGGACTGTGGCCCTTCACCAGCCGGATCTCCCGGAAGGT | + |
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Preference number: 5 (lower is better) Translates to: TEAVHPIHIHDLRES*TGTVALHQPDLPEG Trigger: ACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGTGAATGGGGTGGACCGCCTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | TTTCCAGACCTCGGCAACCGATGGAGGGGTCAGGGAAGGAGACAATaGAGTGGTCGTGGAGACACCCGCACAGCGAACACCTGCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: FPDLGNRWRGQGRRQ*SGRGDTRTANTCIL Trigger: GAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCGAGGTCTGGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | AGGTCCCAGTTGGCAGCACAGACAGGTGCCCAGGTCCCTTGCACTTaGAGTTCCACACGGCCTTCACAGTCACTGCTGCCATTGACCAGC | + |
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Preference number: 5 (lower is better) Translates to: RSQLAAQTGAQVPCT*SSTRPSQSLLPLTS Trigger: GCTGGTCAATGGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAACTGGGACCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | AGACCTCGGCAACCGATGGAGGGGTCAGGGAAGGAGACAATGCAGTaGTCGTGGAGACACCCGCACAGCGAACACCTGCATCCTCCTTGT | + |
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Preference number: 5 (lower is better) Translates to: RPRQPMEGSGKETMQ*SWRHPHSEHLHPPC Trigger: ACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCGAGGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS TCA 90 bp | CTTCTGCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTTGTTaGGTCTGCAGTTGCGGATGGTGGACTCGGTGCCCTTGCAGGTCA | + |
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Preference number: 5 (lower is better) Translates to: LLHPAAGCSHRVACC*VCSCGWWTRCPCRS Trigger: TGACCTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GCTGACTCCATGCCCCAAGGCTACACTCCCAGAGAGAGGACTCATTaGCCCAACAGGATACATTGTGCAGCCAGGGCCGGACCATCTCTC | + |
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Preference number: 5 (lower is better) Translates to: ADSMPQGYTPRERTH*PNRIHCAARAGPSL Trigger: GAGAGATGGTCCGGCCCTGGCTGCACAATGTATCCTGTTGGGGCAATGAGTCCTCTCTCTGGGAGTGTAGCCTTGGGGCATGGAGTCAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | TCTGCTAGGTCCCAGTTGGCAGCACAGACAGGTGCCCAGGTCCCTTaGACTTGGAGTTCCACACGGCCTTCACAGTCACTGCTGCCATTG | + |
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Preference number: 5 (lower is better) Translates to: SARSQLAAQTGAQVP*TWSSTRPSQSLLPL Trigger: CAATGGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAACTGGGACCTAGCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | CACCAAGCAGGCAATCTCCGACAGTTTCCAGACCTCGGCAACCGATaGAGGGGTCAGGGAAGGAGACAATGCAGTGGTCGTGGAGACACC | + |
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Preference number: 5 (lower is better) Translates to: HQAGNLRQFPDLGNR*RGQGRRQCSGRGDT Trigger: GGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCGAGGTCTGGAAACTGTCGGAGATTGCCTGCTTGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GACCCCATTCCCCTTGGTGTCGAACCAGCACCACTCCGTCACATGTaGTCTGTCTGTGTGCCAGCCTCAGATTGCCTTGGTCACCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: DPIPLGVEPAPLRHM*SVCVPASDCLGHLQ Trigger: CTGAAGGTGACCAAGGCAATCTGAGGCTGGCACACAGACAGAGCACATGTGACGGAGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | ACCCCATTCACATTCATGATCTCAGGGAGTCCTGCACAGGGACTGTaGCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCATTTGCACAG | + |
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Preference number: 5 (lower is better) Translates to: TPFTFMISGSPAQGL*PFTSRISRKVPFAQ Trigger: CTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGTGAATGGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | ACACAGCTATACCACACCCTAACTCCCGGCACACCACATGGGCTGTaGGCAAGTCCAGATCAGCATGGCAGATGGTACCCCAGGTCAGTC | + |
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Preference number: 5 (lower is better) Translates to: TQLYHTLTPGTPHGL*ASPDQHGRWYPRSV Trigger: GACTGACCTGGGGTACCATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCCGGGAGTTAGGGTGTGGTATAGCTGTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | ACTCCGTCACATGTGCTCTGTCTGTGTGCCAGCCTCAGATTGCCTTaGTCACCTTCAGATGATGTGCCAGTGAGAGCTGCCCCGAGAGTG | + |
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Preference number: 5 (lower is better) Translates to: TPSHVLCLCASLRLP*SPSDDVPVRAAPRV Trigger: CACTCTCGGGGCAGCTCTCACTGGCACATCATCTGAAGGTGACCAAGGCAATCTGAGGCTGGCACACAGACAGAGCACATGTGACGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | AGTGTAGACACAGCTATACCACACCCTAACTCCCGGCACACCACATaGGCTGTGGGCAAGTCCAGATCAGCATGGCAGATGGTACCCCAG | + |
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Preference number: 5 (lower is better) Translates to: SVDTAIPHPNSRHTT*AVGKSRSAWQMVPQ Trigger: CTGGGGTACCATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCCGGGAGTTAGGGTGTGGTATAGCTGTGTCTACACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | AGAAGAGCAGTTTGGGGTCTGTGCAGGGTCCTGGAGAGCTATCTGTaGTGTTCCTTCACAGTTAATCCAGACCTCCTCCTCCTGGGTGCA | + |
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Preference number: 5 (lower is better) Translates to: RRAVWGLCRVLESYL*CSFTVNPDLLLLGA Trigger: TGCACCCAGGAGGAGGAGGTCTGGATTAACTGTGAAGGAACACCACAGATAGCTCTCCAGGACCCTGCACAGACCCCAAACTGCTCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | AGGCAGCCAAATGGAGAAGAGCAGTTTGGGGTCTGTGCAGGGTCCTaGAGAGCTATCTGTGGTGTTCCTTCACAGTTAATCCAGACCTCC | + |
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Preference number: 5 (lower is better) Translates to: RQPNGEEQFGVCAGS*RAICGVPSQLIQTS Trigger: GGAGGTCTGGATTAACTGTGAAGGAACACCACAGATAGCTCTCCAGGACCCTGCACAGACCCCAAACTGCTCTTCTCCATTTGGCTGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 90 bp | GAGATCATCCCCATCACCAAAATGTCCTCCTGGAGGTACAGATACTaGATTGCCACAGTTGAGTTGGTGACAGAGAACCATGGCATCTGC | + |
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Preference number: 5 (lower is better) Translates to: EIIPITKMSSWRYRY*IATVELVTENHGIC Trigger: GCAGATGCCATGGTTCTCTGTCACCAACTCAACTGTGGCAATGCAGTATCTGTACCTCCAGGAGGACATTTTGGTGATGGGGATGATCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 90 bp | TATGTCTGGCCAGATGAGATCATCCCCATCACCAAAATGTCCTCCTaGAGGTACAGATACTGCATTGCCACAGTTGAGTTGGTGACAGAG | + |
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Preference number: 5 (lower is better) Translates to: YVWPDEIIPITKMSS*RYRYCIATVELVTE Trigger: CTCTGTCACCAACTCAACTGTGGCAATGCAGTATCTGTACCTCCAGGAGGACATTTTGGTGATGGGGATGATCTCATCTGGCCAGACATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 72 bp | CAGCCTCACGCGCAGGCTCCCGGAGCACACCACTCCTaGGTCACGCAAGGTCCCAGCAGGCACCAGCAGGGA | + |
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Preference number: 6 (lower is better) Translates to: QPHAQAPGAHHS*VTQGPSRHQQG Trigger: TCCCTGCTGGTGCCTGCTGGGACCTTGCGTGACGCAGGAGTGGTGTGCTCCGGGAGCCTGCGCGTGAGGCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | GCAGTGGTCGTGGAGACACCCGCACAGCGAACACCTGCATCCTCCTaGTGCGTGCAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: AVVVETPAQRTPASS*CVQSPCPQGSAWQA Trigger: GGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | GGCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCATTaGCACAGAGAGCCACCACCACCCACTCATGGGGGC | + |
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Preference number: 6 (lower is better) Translates to: GPSPAGSPGRCH*HREPPPPTHGG Trigger: GCCCCCATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | AGAGACGGCTGTGCCTTCACCGCACAGCGAACACCTGCATCCTCCTaGTGCGTGCAGTCTCCATGTCCCCAGGGCTCAGCCTGGCAGGCC | + |
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Preference number: 6 (lower is better) Translates to: RDGCAFTAQRTPASS*CVQSPCPQGSAWQA Trigger: GGCCTGCCAGGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGTGAAGGCACAGCCGTCTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209398.2 |
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| CDS GCA 72 bp | GCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCATTTaGACAGAGAGCCACCACCACCCACTCATGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: ALHQPDLPEGAI*TESHHHPLMGA Trigger: TGCCCCCATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 72 bp | AGGGCCGGACCATCTCTCCAGGCAGGGGTACATATTTaGGAGCACCCACAGCAGGGCCACAGCCCAGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: RAGPSLQAGVHI*EHPQQGHSPAV Trigger: GACAGCTGGGCTGTGGCCCTGCTGTGGGTGCTCCCAAATATGTACCCCTGCCTGGAGAGATGGTCCGGCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | CAGGGCCGGACCATCTCTCCAGGCAGGGGTACATATTaGGGAGCACCCACAGCAGGGCCACAGCCCAGCTGT | + |
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Preference number: 6 (lower is better) Translates to: QGRTISPGRGTY*GAPTAGPQPSC Trigger: ACAGCTGGGCTGTGGCCCTGCTGTGGGTGCTCCCAAATATGTACCCCTGCCTGGAGAGATGGTCCGGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | GTGGAGACACCCGCACAGCGAACACCTGCATCCTCCTaGTGCGTGCAGTCTCCATGTCCCCAGGGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VETPAQRTPASS*CVQSPCPQGSA Trigger: GGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | AGGGACTGTGGCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCATTaGCACAGAGAGCCACCACCACCCACTCATGGGGGCAAGCACGCT | + |
|
Preference number: 6 (lower is better) Translates to: RDCGPSPAGSPGRCH*HREPPPPTHGGKHA Trigger: AGCGTGCTTGCCCCCATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 90 bp | GCGTCACGCAAGGTCCCAGCAGGCACCAGCAGGGACGTAGAAACATaGCAATGCACCAGGCGAGTCTCAGAGCCCAGGCAGCGCACCTGG | + |
|
Preference number: 6 (lower is better) Translates to: ASRKVPAGTSRDVET*QCTRRVSEPRQRTW Trigger: CCAGGTGCGCTGCCTGGGCTCTGAGACTCGCCTGGTGCATTGCAATGTTTCTACGTCCCTGCTGGTGCCTGCTGGGACCTTGCGTGACGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 90 bp | TTGTGCAGCCAGGGCCGGACCATCTCTCCAGGCAGGGGTACATATTaGGGAGCACCCACAGCAGGGCCACAGCCCAGCTGTCTACACACC | + |
|
Preference number: 6 (lower is better) Translates to: LCSQGRTISPGRGTY*GAPTAGPQPSCLHT Trigger: GGTGTGTAGACAGCTGGGCTGTGGCCCTGCTGTGGGTGCTCCCAAATATGTACCCCTGCCTGGAGAGATGGTCCGGCCCTGGCTGCACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | CCAGCAGGCACCAGCAGGGACGTAGAAACATTGCAATaGACCAGGCGAGTCTCAGAGCCCAGGCAGCGCACC | + |
|
Preference number: 6 (lower is better) Translates to: PAGTSRDVETLQ*TRRVSEPRQRT Trigger: GGTGCGCTGCCTGGGCTCTGAGACTCGCCTGGTGCATTGCAATGTTTCTACGTCCCTGCTGGTGCCTGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | TTCCGGGGAGCACTGAGGGCGTGGCCACAGTCCAGCTaGCTACAGACCACTTGTGCATCCTGTAGGTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FRGALRAWPQSS*LQTTCASCRSQ Trigger: CTGGGACCTACAGGATGCACAAGTGGTCTGTAGGCAGCTGGACTGTGGCCACGCCCTCAGTGCTCCCCGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | CTCGGCAACCGATGGAGGGGTCAGGGAAGGAGACAATaGAGTGGTCGTGGAGACACCCGCACAGCGAACACC | + |
|
Preference number: 6 (lower is better) Translates to: LGNRWRGQGRRQ*SGRGDTRTANT Trigger: GGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | TGCACCAGGCGAGTCTCAGAGCCCAGGCAGCGCACCTaGCTCAGCCCCACAGGGACTCTCCTGAAAATAGGA | + |
|
Preference number: 6 (lower is better) Translates to: CTRRVSEPRQRT*LSPTGTLLKIG Trigger: TCCTATTTTCAGGAGAGTCCCTGTGGGGCTGAGCCAGGTGCGCTGCCTGGGCTCTGAGACTCGCCTGGTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TGTGCCTTCACCGCACAGCGAACACCTGCATCCTCCTaGTGCGTGCAGTCTCCATGTCCCCAGGGCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: CAFTAQRTPASS*CVQSPCPQGSA Trigger: GGCTGAGCCCTGGGGACATGGAGACTGCACGCACAAGGAGGATGCAGGTGTTCGCTGTGCGGTGAAGGCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000209398.2 |
||
| CDS TCA 72 bp | GAGGCCTCTGCCAGTGTCCACTCCAGGTTGCACAGGTaGCCCCATTCCCCTTGGTGTCGAACCAGCACCACT | + |
|
Preference number: 6 (lower is better) Translates to: EASASVHSRLHR*PHSPWCRTSTT Trigger: AGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACACTGGCAGAGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS TCA 72 bp | CCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTTGTTaGGTCTGCAGTTGCGGATGGTGGACTCGGTGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: PAAGCSHRVACC*VCSCGWWTRCP Trigger: AGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | GACTGTGGCCCTTCACCAGCCGGATCTCCCGGAAGGTaGCATTTGCACAGAGAGCCACCACCACCCACTCAT | + |
|
Preference number: 6 (lower is better) Translates to: DCGPSPAGSPGR*HLHREPPPPTH Trigger: ATGAGTGGGTGGTGGTGGCTCTCTGTGCAAATGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TCCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTTGTaGAGTCTGCAGTTGCGGATGGTGGACTCGGTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSSRLQPPRSLL*SLQLRMVDSVP Trigger: GGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | GTTGGCAGCACAGACAGGTGCCCAGGTCCCTTGCACTaGGAGTTCCACACGGCCTTCACAGTCACTGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGSTDRCPGPLH*EFHTAFTVTAA Trigger: GGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | ACACCACAGAGGCCTCTGCCAGTGTCCACTCCAGGTTaGACAGGTGACCCCATTCCCCTTGGTGTCGAACCA | + |
|
Preference number: 6 (lower is better) Translates to: TPQRPLPVSTPG*TGDPIPLGVEP Trigger: TGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACACTGGCAGAGGCCTCTGTGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | CACCACCCACTCATGGGGGCAAGCACGCTGACTCCATaGCCCAAGGCTACACTCCCAGAGAGAGGACTCATT | + |
|
Preference number: 6 (lower is better) Translates to: HHPLMGASTLTP*PKATLPERGLI Trigger: AATGAGTCCTCTCTCTGGGAGTGTAGCCTTGGGGCATGGAGTCAGCGTGCTTGCCCCCATGAGTGGGTGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | ACATTCATGATCTCAGGGAGTCCTGCACAGGGACTGTaGCCCTTCACCAGCCGGATCTCCCGGAAGGTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TFMISGSPAQGL*PFTSRISRKVP Trigger: TGGCACCTTCCGGGAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | TACCACACCCTAACTCCCGGCACACCACATGGGCTGTaGGCAAGTCCAGATCAGCATGGCAGATGGTACCCC | + |
|
Preference number: 6 (lower is better) Translates to: YHTLTPGTPHGL*ASPDQHGRWYP Trigger: GGGGTACCATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCCGGGAGTTAGGGTGTGGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | TTGGCAGCACAGACAGGTGCCCAGGTCCCTTGCACTTaGAGTTCCACACGGCCTTCACAGTCACTGCTGCCA | + |
|
Preference number: 6 (lower is better) Translates to: LAAQTGAQVPCT*SSTRPSQSLLP Trigger: TGGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | ATGGAGGGGTCAGGGAAGGAGACAATGCAGTGGTCGTaGAGACACCCGCACAGCGAACACCTGCATCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: MEGSGKETMQWS*RHPHSEHLHPP Trigger: AGGAGGATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | CAACCGATGGAGGGGTCAGGGAAGGAGACAATGCAGTaGTCGTGGAGACACCCGCACAGCGAACACCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPMEGSGKETMQ*SWRHPHSEHLH Trigger: ATGCAGGTGTTCGCTGTGCGGGTGTCTCCACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TCCCAGAGAGAGGACTCATTGCCCCAACAGGATACATaGTGCAGCCAGGGCCGGACCATCTCTCCAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SQREDSLPQQDT*CSQGRTISPGR Trigger: CCTGCCTGGAGAGATGGTCCGGCCCTGGCTGCACAATGTATCCTGTTGGGGCAATGAGTCCTCTCTCTGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | CATGCCCCAAGGCTACACTCCCAGAGAGAGGACTCATaGCCCCAACAGGATACATTGTGCAGCCAGGGCCGG | + |
|
Preference number: 6 (lower is better) Translates to: HAPRLHSQREDS*PQQDTLCSQGR Trigger: CCGGCCCTGGCTGCACAATGTATCCTGTTGGGGCAATGAGTCCTCTCTCTGGGAGTGTAGCCTTGGGGCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | GCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTaGTTGAGTCTGCAGTTGCGGATGGTGGACTCGGTG | + |
|
Preference number: 6 (lower is better) Translates to: ASSSRLQPPRSL*LSLQLRMVDSV Trigger: CACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | GTCCCAGTTGGCAGCACAGACAGGTGCCCAGGTCCCTaGCACTTGGAGTTCCACACGGCCTTCACAGTCACT | + |
|
Preference number: 6 (lower is better) Translates to: VPVGSTDRCPGP*HLEFHTAFTVT Trigger: AGTGACTGTGAAGGCCGTGTGGAACTCCAAGTGCAAGGGACCTGGGCACCTGTCTGTGCTGCCAACTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | AAGGTCCCAGCAGGCACCAGCAGGGACGTAGAAACATaGCAATGCACCAGGCGAGTCTCAGAGCCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: KVPAGTSRDVET*QCTRRVSEPRQ Trigger: CTGCCTGGGCTCTGAGACTCGCCTGGTGCATTGCAATGTTTCTACGTCCCTGCTGGTGCCTGCTGGGACCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | CTCTGCCAGTGTCCACTCCAGGTTGCACAGGTGACCCCATTCCCCTaGGTGTCGAACCAGCACCACTCCGTCACATGTGCTCTGTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: LCQCPLQVAQVTPFP*VSNQHHSVTCALSV Trigger: CACAGACAGAGCACATGTGACGGAGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACACTGGCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | ACTTCTGCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTTGTaGAGTCTGCAGTTGCGGATGGTGGACTCGGTGCCCTTGCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: TSASSSRLQPPRSLL*SLQLRMVDSVPLQV Trigger: GACCTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | AGCACCACTCCGTCACATGTGCTCTGTCTGTGTGCCAGCCTCAGATaGCCTTGGTCACCTTCAGATGATGTGCCAGTGAGAGCTGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: STTPSHVLCLCASLR*PWSPSDDVPVRAAP Trigger: CGGGGCAGCTCTCACTGGCACATCATCTGAAGGTGACCAAGGCAATCTGAGGCTGGCACACAGACAGAGCACATGTGACGGAGTGGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | ATGACTTCTGCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTTGTaGTTGAGTCTGCAGTTGCGGATGGTGGACTCGGTGCCCTTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: MTSASSSRLQPPRSL*LSLQLRMVDSVPLQ Trigger: CTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGTCAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | CAGATGACTTCTGCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTaGTTGTTGAGTCTGCAGTTGCGGATGGTGGACTCGGTGCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: QMTSASSSRLQPPRS*LLSLQLRMVDSVPL Trigger: CAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGTCATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 90 bp | GCCTCCACGTGTCCTGAGCAGATGACTTCTGCATCCAGCAGCAGGTaGCAGCCACCGCGTAGCTTGTTGTTGAGTCTGCAGTTGCGGATG | + |
|
Preference number: 6 (lower is better) Translates to: ASTCPEQMTSASSSR*QPPRSLLLSLQLRM Trigger: CATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGTCATCTGCTCAGGACACGTGGAGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 72 bp | CCCCTTGGTGTCGAACCAGCACCACTCCGTCACATGTaGTCTGTCTGTGTGCCAGCCTCAGATTGCCTTGGT | + |
|
Preference number: 6 (lower is better) Translates to: PLGVEPAPLRHM*SVCVPASDCLG Trigger: ACCAAGGCAATCTGAGGCTGGCACACAGACAGAGCACATGTGACGGAGTGGTGCTGGTTCGACACCAAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | ATGCCCCAAGGCTACACTCCCAGAGAGAGGACTCATTaGCCCAACAGGATACATTGTGCAGCCAGGGCCGGA | + |
|
Preference number: 6 (lower is better) Translates to: MPQGYTPRERTH*PNRIHCAARAG Trigger: TCCGGCCCTGGCTGCACAATGTATCCTGTTGGGGCAATGAGTCCTCTCTCTGGGAGTGTAGCCTTGGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | GTCCACCCCATTCACATTCATGATCTCAGGGAGTCCTaGACAGGGACTGTGGCCCTTCACCAGCCGGATCTC | + |
|
Preference number: 6 (lower is better) Translates to: VHPIHIHDLRES*TGTVALHQPDL Trigger: GAGATCCGGCTGGTGAAGGGCCACAGTCCCTGTGCAGGACTCCCTGAGATCATGAATGTGAATGGGGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS GCA 72 bp | CTGTATTCCCCAGGACACAACCATGGGCCCCCAGGGTaGTTGCTGCACAGTGAAGCAAATGAGGCTCTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: LYSPGHNHGPPG*LLHSEANEALS Trigger: GGACAGAGCCTCATTTGCTTCACTGTGCAGCAAGCACCCTGGGGGCCCATGGTTGTGTCCTGGGGAATACAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | GGCAATCTCCGACAGTTTCCAGACCTCGGCAACCGATaGAGGGGTCAGGGAAGGAGACAATGCAGTGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: GNLRQFPDLGNR*RGQGRRQCSGR Trigger: ACGACCACTGCATTGTCTCCTTCCCTGACCCCTCCATCGGTTGCCGAGGTCTGGAAACTGTCGGAGATTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084460.7 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TGTCCACTCCAGGTTGCACAGGTGACCCCATTCCCCTaGGTGTCGAACCAGCACCACTCCGTCACATGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLQVAQVTPFP*VSNQHHSVTCA Trigger: AGCACATGTGACGGAGTGGTGCTGGTTCGACACCAAGGGGAATGGGGTCACCTGTGCAACCTGGAGTGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TTGCAGCCACCGCGTAGCTTGTTGTTGAGTCTGCAGTaGCGGATGGTGGACTCGGTGCCCTTGCAGGTCATG | + |
|
Preference number: 6 (lower is better) Translates to: LQPPRSLLLSLQ*RMVDSVPLQVM Trigger: CATGACCTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TCTGCATCCAGCAGCAGGTTGCAGCCACCGCGTAGCTaGTTGTTGAGTCTGCAGTTGCGGATGGTGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: SASSSRLQPPRS*LLSLQLRMVDS Trigger: CGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TGGAGTTCCACACGGCCTTCACAGTCACTGCTGCCATaGACCAGCCGGAACTCTGAGCAGGTGAGTGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WSSTRPSQSLLP*TSRNSEQVSAA Trigger: TGCTGCACTCACCTGCTCAGAGTTCCGGCTGGTCAATGGCAGCAGTGACTGTGAAGGCCGTGTGGAACTCCA 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 90 bp | AGGCTACACTCCCAGAGAGAGGACTCATTGCCCCAACAGGATACATaGTGCAGCCAGGGCCGGACCATCTCTCCAGGCAGGGGTACATAT | + |
|
Preference number: 6 (lower is better) Translates to: RLHSQREDSLPQQDT*CSQGRTISPGRGTY Trigger: ATATGTACCCCTGCCTGGAGAGATGGTCCGGCCCTGGCTGCACAATGTATCCTGTTGGGGCAATGAGTCCTCTCTCTGGGAGTGTAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 90 bp | AGCAGCAGGTTGCAGCCACCGCGTAGCTTGTTGTTGAGTCTGCAGTaGCGGATGGTGGACTCGGTGCCCTTGCAGGTCATGTACTTACTG | + |
|
Preference number: 6 (lower is better) Translates to: SSRLQPPRSLLLSLQ*RMVDSVPLQVMYLL Trigger: CAGTAAGTACATGACCTGCAAGGGCACCGAGTCCACCATCCGCAACTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS TCA 72 bp | GTGTGCCAGCCTCAGATTGCCTTGGTCACCTTCAGATaGTGTGCCAGTGAGAGCTGCCCCGAGAGTGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: VCQPQIALVTFR*CASESCPESEK Trigger: CTTCTCACTCTCGGGGCAGCTCTCACTGGCACATCATCTGAAGGTGACCAAGGCAATCTGAGGCTGGCACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS TCA 72 bp | ATGCAGGTCCCAGGCGTCATCCAATACGCGGCCCCATaGACCATCCAGGGAAATCTCTACACGGCCATCACA | + |
|
Preference number: 6 (lower is better) Translates to: MQVPGVIQYAAP*TIQGNLYTAIT Trigger: TGTGATGGCCGTGTAGAGATTTCCCTGGATGGTTCATGGGGCCGCGTATTGGATGACGCCTGGGACCTGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CCA 72 bp | ACAGCTATACCACACCCTAACTCCCGGCACACCACATaGGCTGTGGGCAAGTCCAGATCAGCATGGCAGATG | + |
|
Preference number: 6 (lower is better) Translates to: TAIPHPNSRHTT*AVGKSRSAWQM Trigger: CATCTGCCATGCTGATCTGGACTTGCCCACAGCCCATGTGGTGTGCCGGGAGTTAGGGTGTGGTATAGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 90 bp | AGCCTCAGAGCCACAGATTCTGAGCAGAACACTCCAGCATCCTCCTaGTGTCTGCAGTCATGTTGGCCCCAGCTTCCTGACTGGCACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLRATDSEQNTPASS*CLQSCWPQLPDWHF Trigger: GAAGTGCCAGTCAGGAAGCTGGGGCCAACATGACTGCAGACACAAGGAGGATGCTGGAGTGTTCTGCTCAGAATCTGTGGCTCTGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
||
| CDS CAA 72 bp | TGTCCTGAGCAGATGACTTCTGCATCCAGCAGCAGGTaGCAGCCACCGCGTAGCTTGTTGTTGAGTCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: CPEQMTSASSSR*QPPRSLLLSLQ Trigger: CTGCAGACTCAACAACAAGCTACGCGGTGGCTGCAACCTGCTGCTGGATGCAGAAGTCATCTGCTCAGGACA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS TCA 72 bp | ATTGCCACAGGGTGGCATTGTGTAGATTTCGACACTTaGTATTATCCACCCAGGAGATTCCCAGGCCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: IATGWHCVDFDT*YYPPRRFPGQL Trigger: GAGCTGGCCTGGGAATCTCCTGGGTGGATAATATCAAGTGTCGAAATCTACACAATGCCACCCTGTGGCAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 72 bp | AATGGAGAAGAGCAGTTTGGGGTCTGTGCAGGGTCCTaGAGAGCTATCTGTGGTGTTCCTTCACAGTTAATC | + |
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Preference number: 6 (lower is better) Translates to: NGEEQFGVCAGS*RAICGVPSQLI Trigger: GATTAACTGTGAAGGAACACCACAGATAGCTCTCCAGGACCCTGCACAGACCCCAAACTGCTCTTCTCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CCA 72 bp | CAGCATCATCATAACCCTCTTCCAGCATCAGTAGCCTaGATACTGTGTTCTCCTCCTTCTTTGGCACAGGGT | + |
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Preference number: 6 (lower is better) Translates to: QHHHNPLPASVA*ILCSPPSLAQG Trigger: ACCCTGTGCCAAAGAAGGAGGAGAACACAGTATCCAGGCTACTGATGCTGGAAGAGGGTTATGATGATGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | CATTGCCACAGGGTGGCATTGTGTAGATTTCGACACTaGATATTATCCACCCAGGAGATTCCCAGGCCAGCT | + |
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Preference number: 6 (lower is better) Translates to: HCHRVALCRFRH*ILSTQEIPRPA Trigger: AGCTGGCCTGGGAATCTCCTGGGTGGATAATATCAAGTGTCGAAATCTACACAATGCCACCCTGTGGCAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | TTCCATGGGGCAGAAGGGCATTGCCACAGGGTGGCATaGTGTAGATTTCGACACTTGATATTATCCACCCAG | + |
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Preference number: 6 (lower is better) Translates to: FHGAEGHCHRVA*CRFRHLILSTQ Trigger: CTGGGTGGATAATATCAAGTGTCGAAATCTACACAATGCCACCCTGTGGCAATGCCCTTCTGCCCCATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS GCA 72 bp | CCCATCACCAAAATGTCCTCCTGGAGGTACAGATACTaGATTGCCACAGTTGAGTTGGTGACAGAGAACCAT | + |
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Preference number: 6 (lower is better) Translates to: PITKMSSWRYRY*IATVELVTENH Trigger: ATGGTTCTCTGTCACCAACTCAACTGTGGCAATGCAGTATCTGTACCTCCAGGAGGACATTTTGGTGATGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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| CDS CAA 72 bp | GCATCAGTAGCCTGGATACTGTGTTCTCCTCCTTCTTaGGCACAGGGTCAACTTCAATGTCCTCATAGATAC | + |
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Preference number: 6 (lower is better) Translates to: ASVAWILCSPPS*AQGQLQCPHRY Trigger: GTATCTATGAGGACATTGAAGTTGACCCTGTGCCAAAGAAGGAGGAGAACACAGTATCCAGGCTACTGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084460.7 ENSMUST00000209398.2 ENSMUST00000209637.2 |
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