Pregenerated sensors for SCARF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038188Ensembl transcript IDs: ENSMUST00000042808.13, ENSMUST00000118243.2, ENSMUST00000123819.2
Found 240 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGGCGGCCCCACCAGCCCGGCGGGCATACACAGGTTCCAGTGGCCTaGTCACAGCGTGAGGCTGGGTTGCACTGGCATGGGCGACGACAC | + |
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Preference number: 1 (lower is better) Translates to: RRPHQPGGHTQVPVA*SQREAGLHWHGRRH Trigger: GTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCCCGCCGGGCTGGTGGGGCCGCCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | TGCAGCGGCGGCCCCACCAGCCCGGCGGGCATACACAGGTTCCAGTaGCCTGGTCACAGCGTGAGGCTGGGTTGCACTGGCATGGGCGAC | + |
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Preference number: 1 (lower is better) Translates to: CSGGPTSPAGIHRFQ*PGHSVRLGCTGMGD Trigger: GTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCCCGCCGGGCTGGTGGGGCCGCCGCTGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | CCGCTTGACAGGGCTCCCCAAGCCGGCAGCGGGGGCACTGCCCAGTaGACCTCTCACCAAAGGTGCCTGCAGGACATGGCTGCTTGCACT | + |
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Preference number: 1 (lower is better) Translates to: PLDRAPQAGSGGTAQ*TSHQRCLQDMAACT Trigger: AGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCGGCTTGGGGAGCCCTGTCAAGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | GGCATACACAGGTTCCAGTGGCCTGGTCACAGCGTGAGGCTGGGTTaGACTGGCATGGGCGACGACACGTGGGTGACCACCAGCCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: GIHRFQWPGHSVRLG*TGMGDDTWVTTSQG Trigger: ACCCTGGCTGGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | CCGGCAGCGGGGGCACTGCCCAGTGCACCTCTCACCAAAGGTGCCTaGAGGACATGGCTGCTTGCACTGAGTACCGTTCCAGCCTGGCTT | + |
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Preference number: 1 (lower is better) Translates to: PAAGALPSAPLTKGA*RTWLLALSTVPAWL Trigger: AAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | CAAGCCGGCAGCGGGGGCACTGCCCAGTGCACCTCTCACCAAAGGTaGCTGCAGGACATGGCTGCTTGCACTGAGTACCGTTCCAGCCTG | + |
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Preference number: 1 (lower is better) Translates to: QAGSGGTAQCTSHQR*LQDMAACTEYRSSL Trigger: CAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCGGCTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | AGGCTGGCATTGGCAATCACCCGTGGCCGGTTCGCACTGGCCACGTaGATGACAGGGGCAGGTCTCACGACAGTCGTGGCCCCAGTACTG | + |
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Preference number: 1 (lower is better) Translates to: RLALAITRGRFALAT*MTGAGLTTVVAPVL Trigger: CAGTACTGGGGCCACGACTGTCGTGAGACCTGCCCCTGTCATCCACGTGGCCAGTGCGAACCGGCCACGGGTGATTGCCAATGCCAGCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR TCA 90 bp | TGGCATTGGCAATCACCCGTGGCCGGTTCGCACTGGCCACGTGGATaGCAGGGGCAGGTCTCACGACAGTCGTGGCCCCAGTACTGTCCT | + |
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Preference number: 1 (lower is better) Translates to: WHWQSPVAGSHWPRG*QGQVSRQSWPQYCP Trigger: AGGACAGTACTGGGGCCACGACTGTCGTGAGACCTGCCCCTGTCATCCACGTGGCCAGTGCGAACCGGCCACGGGTGATTGCCAATGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | GGTCACAGCGTGAGGCTGGGTTGCACTGGCATGGGCGACGACACGTaGGTGACCACCAGCCAGGGTCACAGTGGCACAAGCCTGTCTTTG | + |
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Preference number: 1 (lower is better) Translates to: GHSVRLGCTGMGDDT*VTTSQGHSGTSLSL Trigger: CAAAGACAGGCTTGTGCCACTGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | CAGGAACAGTGGCCAGAAGTAACGCTGCATTGGCCTCGCACACACTaGCACTTACGACTGCACTCCGGACCCCACCAGCCCGGCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QEQWPEVTLHWPRTH*HLRLHSGPHQPGRQ Trigger: CTGCCTGCCGGGCTGGTGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | CCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTaGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTGGCCTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: PLGVSSGLTAVDSMA*ESTAPGAEPALAWF Trigger: GAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | GGGGCACTGCCCAGTGCACCTCTCACCAAAGGTGCCTGCAGGACATaGCTGCTTGCACTGAGTACCGTTCCAGCCTGGCTTGCAGGACTC | + |
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Preference number: 1 (lower is better) Translates to: GALPSAPLTKGACRT*LLALSTVPAWLAGL Trigger: GAGTCCTGCAAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR TCA 90 bp | ATCCTCAGGGGGAGGGAAGGAGCCTCCAGGAAGGCTGGCTTCTGGTaGCTCTTCTTGGGCCATAGGGACCATCTCTTCTCGAGGCGGCAC | + |
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Preference number: 1 (lower is better) Translates to: ILRGREGASRKAGFW*LFLGHRDHLFSRRH Trigger: GTGCCGCCTCGAGAAGAGATGGTCCCTATGGCCCAAGAAGAGTCACCAGAAGCCAGCCTTCCTGGAGGCTCCTTCCCTCCCCCTGAGGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | TCTCCAGAGCTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTTaGTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGACGG | + |
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Preference number: 1 (lower is better) Translates to: SPELVAVGASSSVFT*SGPVDSSASCPSGR Trigger: CCGTCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAGCTCTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | GCATCCCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTaGTGTGGCGGCACGGACATGGGCACAACATTCTCATACAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: ASPSTGFPGTHQGPQ*CGGTDMGTTFSYRG Trigger: GCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | TGGAAGCCAGGAGGGCAGGAACAGTGGCCAGAAGTAACGCTGCATTaGCCTCGCACACACTGGCACTTACGACTGCACTCCGGACCCCAC | + |
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Preference number: 1 (lower is better) Translates to: WKPGGQEQWPEVTLH*PRTHWHLRLHSGPH Trigger: GTGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCCTGGCTTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | GGTGCCTGCAGGACATGGCTGCTTGCACTGAGTACCGTTCCAGCCTaGCTTGCAGGACTCACAGTTGCCGGTGACTGGAGAGCATGTGGC | + |
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Preference number: 1 (lower is better) Translates to: GACRTWLLALSTVPA*LAGLTVAGDWRACG Trigger: GCCACATGCTCTCCAGTCACCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | AAAGGAGACGGATGGCCTCTTGGCCCTAGCCAGGCTGGAGGTACGTaGAATGGGGAATGGTGTGGAGGCATCCTCAGGGGGAGGGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: KGDGWPLGPSQAGGT*NGEWCGGILRGREG Trigger: TCCTTCCCTCCCCCTGAGGATGCCTCCACACCATTCCCCATTCCACGTACCTCCAGCCTGGCTAGGGCCAAGAGGCCATCCGTCTCCTTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | AGAGCTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTTGCTCTaGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGACGGGGTTG | + |
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Preference number: 1 (lower is better) Translates to: RACGRRSILLCVHLL*ACRLLRLLPFRTGL Trigger: CAACCCCGTCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAGCTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR CCA 90 bp | CCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTaGCGGCACGGACATGGGCACAACATTCTCATACAGGGGCTCCTC | + |
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Preference number: 1 (lower is better) Translates to: PIHRLPGNSPRSSVL*RHGHGHNILIQGLL Trigger: GAGGAGCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | GCCCAGTGCACCTCTCACCAAAGGTGCCTGCAGGACATGGCTGCTTaGACTGAGTACCGTTCCAGCCTGGCTTGCAGGACTCACAGTTGC | + |
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Preference number: 1 (lower is better) Translates to: AQCTSHQRCLQDMAA*TEYRSSLACRTHSC Trigger: GCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | GCTCCTTCTCTTCCGCCTGCTTCTGGGAATCCTGTTCCAGGGAACTaGCTCCAGCGTCTGGCTCCTGGACAGTCCCTGAGCTCTCAATGC | + |
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Preference number: 1 (lower is better) Translates to: APSLPPASGNPVPGN*LQRLAPGQSLSSQC Trigger: GCATTGAGAGCTCAGGGACTGTCCAGGAGCCAGACGCTGGAGGCAGTTCCCTGGAACAGGATTCCCAGAAGCAGGCGGAAGAGAAGGAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | CTGGAGAGCATGTGGCATTCAGCTCACAGTGGCCACAGCTTTCTTTaGACTGTGCCCCATAGTGGCCAGGGTTGCAAGGCAGCTCACAGC | + |
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Preference number: 1 (lower is better) Translates to: LESMWHSAHSGHSFL*TVPHSGQGCKAAHS Trigger: GCTGTGAGCTGCCTTGCAACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAATGCCACATGCTCTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR GCA 90 bp | GGCGGCACGGACATGGGCACAACATTCTCATACAGGGGCTCCTCTTaGTCCTTCTCTTCCGCCTGCTTCTGGGAATCCTGTTCCAGGGAA | + |
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Preference number: 1 (lower is better) Translates to: GGTDMGTTFSYRGSS*SFSSACFWESCSRE Trigger: TTCCCTGGAACAGGATTCCCAGAAGCAGGCGGAAGAGAAGGAGCAAGAGGAGCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR TCA 90 bp | ACTGAGTACCGTTCCAGCCTGGCTTGCAGGACTCACAGTTGCCGGTaGCTGGAGAGCATGTGGCATTCAGCTCACAGTGGCCACAGCTTT | + |
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Preference number: 1 (lower is better) Translates to: TEYRSSLACRTHSCR*LESMWHSAHSGHSF Trigger: AAAGCTGTGGCCACTGTGAGCTGAATGCCACATGCTCTCCAGTCACCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR TCA 90 bp | TTTCTGAGGTGTCCCTGCCAGCATATAGATAGTGGCCACAGATCCTaGGCTCTCCTGGATGCCTCCATCAGTGGTCTCCGCACACTCAGC | + |
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Preference number: 1 (lower is better) Translates to: FLRCPCQHIDSGHRS*ALLDASISGLRTLS Trigger: GCTGAGTGTGCGGAGACCACTGATGGAGGCATCCAGGAGAGCTCAGGATCTGTGGCCACTATCTATATGCTGGCAGGGACACCTCAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | GGTTCTCACACCTGTGCCCCAGCCAACCGGGGTCGCAGTGCTGGCAGTGCCCAGCGGCAGCGGGGGCACTaGCCAGTGCACCTCTCACCA | + |
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Preference number: 2 (lower is better) Translates to: GSHTCAPANRGRSAGSAQRQRGH*PVHLSP Trigger: TGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCG...CTGGGCACTGCCAGCACTGCGACCCCGGTTGGCTGGGGCACAGGTGTGAGAACC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CAA 90 bp | GGGCATACACAGGTTCCAGTGGCCTGGTCACAGCGTGAGGCTGGGTaGCACTGGCATGGGCGACGACACGTGGGTGACCACCAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: GHTQVPVAWSQREAG*HWHGRRHVGDHQPG Trigger: CCCTGGCTGGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTGGGAGAGCACGGGTCGCACTGTCCGTaGGGGCCGCAGGTGCAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SGCFLWSNCGGLHGLGEHGSHCP*GPQVQG Trigger: CCCCTGCACCTGCGGCCCCCACGGACAGTGCGACCC...GTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCAGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCA | + |
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Preference number: 2 (lower is better) Translates to: PHPQASRELTKVLSAVAAVQSGS*AAVGTA Trigger: TGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGAC...TGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | CTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTGGCCTGCATCCCGCTCTCCCTaGATCCCCATCCACAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: LRSGLPIPPRARPTTSWPASRSP*IPIHRL Trigger: AAGCCTGTGGATGGGGATGCAGGGAGAGCGGGATGC...AGGCCAGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | CCTGCATCCCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTCTGGACAGCGGGAGCTaGACTGGGCTCCGAAGAATC | + |
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Preference number: 2 (lower is better) Translates to: PASPSTGFPGTHQGPQCCLDSGS*TGLRRI Trigger: GATTCTTCGGAGCCCAGTGCAGCTCCCGCTGTCCAG...ACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGGGATGCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAAGGTGCCAAGGGGACAAGGGTTCTCACACCTGTGCCCCAGCCAACCGGCATAGTGGCCAGGGTTaGAAGGCAGCTCACAGCGGA | + |
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Preference number: 2 (lower is better) Translates to: SQRCQGDKGSHTCAPANRHSGQG*KAAHSG Trigger: TCCGCTGTGAGCTGCCTTGCAACCCTGGCCACTATG...CCGGTTGGCTGGGGCACAGGTGTGAGAACCCTTGTCCCCTTGGCACCTTTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | CCCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCAACCTCTCACCAAAGGTaGCTGCAGGACATGGCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PHPQASRELTKVLSAVAATSHQR*LQDMAA Trigger: AGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGT...TGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | TCTGTGTTCACTTGCTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGAGTCCCAGACACAGGGTaGCAGAGCCCCTCTGGGCAT | + |
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Preference number: 2 (lower is better) Translates to: SVFTCSGPVDSSASCPSGVPDTG*QSPSGH Trigger: ATGCCCAGAGGGGCTCTGCCACCCTGTGTCTGGGAC...TCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CAA 90 bp | ATGGAAGCCAGGAGGGCAGGAACAGTGGCCAGAAGTAACGCTGCATaGGCCTCGCACACACTGGCACTTACGACTGCACTCCGGACCCCA | + |
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Preference number: 2 (lower is better) Translates to: MEARRAGTVARSNAA*ASHTLALTTALRTP Trigger: TGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCCTGGCTTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR CAA 90 bp | ATCTCCAGAGCTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTaGCTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGACG | + |
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Preference number: 2 (lower is better) Translates to: ISRACGRRSILLCVH*LWACRLLRLLPFRT Trigger: CGTCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAGCTCTGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR-3UTR TCA 90 bp | TCAATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTGTGGCAGTTGCAACTaGAGCTGCAGCGGCGGCCCC | + |
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Preference number: 2 (lower is better) Translates to: SMPSPRPLGVSSGLTAVDCGSCN*SCSGGP Trigger: GGGGCCGCCGCTGCAGCTTCAGTTGCAACTGCCACA...GTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | TCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTGGGAGAGCACCGTTCCAGCCTGGCTTaGAGGACTCACAGTTGCCGG | + |
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Preference number: 2 (lower is better) Translates to: SGCFLWSNCGGLHGLGEHRSSLA*RTHSCR Trigger: CCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACG...GTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | CCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACTTTGGGATCGGGTTCTCACACCTGTaGCCCAGCCAACCGGGGTCG | + |
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Preference number: 2 (lower is better) Translates to: PTQRSAQRLRDSTLYFGIGFSHL*PSQPGS Trigger: CGACCCCGGTTGGCTGGGGCACAGGTGTGAGAACCC...GATCCCAAAGTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR TCA 90 bp | TCTGTGTTCACTTGCTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGAAGCAGACGATGCCCATaGGGAGCAGCAGCAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SVFTCSGPVDSSASCPSGSRRCP*GAAAEV Trigger: TACCTCTGCTGCTGCTCCTCATGGGCATCGTCTGCT...TCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | AATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCGCCCCAGTACTGTCCTaGACAGCGGGAGCTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: NAISQTSGCFLWSNCGGLAPVLS*TAGAAL Trigger: CAGTGCAGCTCCCGCTGTCCAGGACAGTACTGGGGC...GAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | AATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCAGGTTCCAGTGGCCTaGTCACAGCGTGAGGCTGGG | + |
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Preference number: 2 (lower is better) Translates to: NAISQTSGCFLWSNCGGLQVPVA*SQREAG Trigger: CCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTG...GAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGGGCAGGAACAGTGGCCAGAAGTAACGCTGCATTGGCCTCGCACACACTGGATACACAGGTTCCAGTaGCCTGGTCACAGCGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: GGQEQWPEVTLHWPRTHWIHRFQ*PGHSVR Trigger: CCTCACGCTGTGACCAGGCCACTGGAACCTGTGTAT...CCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| 3UTR-3UTR GCA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCGCATCCCGCTCTCCCTaGATCCCCATCCACAGGCTT | + |
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Preference number: 2 (lower is better) Translates to: NNGGKALSPSPPSSDLGLASRSP*IPIHRL Trigger: AAGCCTGTGGATGGGGATGCAGGGAGAGCGGGATGC...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| 3UTR-3UTR CCA 90 bp | CCAGCGCTGGCCTGGTTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACAGAATTCAGAACAATaGAGGAAAAGCCCTGTCGCC | + |
|
Preference number: 2 (lower is better) Translates to: PALAWFRPRDRRRGLGIAQNSEQ*RKSPVA Trigger: GGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCTG...TGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAACCAGGCCAGCGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR GCA 90 bp | TTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGCATCCCGCTCTCCCTaGATCCCCATCCACAGGCTT | + |
|
Preference number: 2 (lower is better) Translates to: FRTMEEKPCRRLLLPLTLASRSP*IPIHRL Trigger: AAGCCTGTGGATGGGGATGCAGGGAGAGCGGGATGC...CAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR GCA 90 bp | TCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTGGGAGAGCACGTGGTGCAAACTTCGTaGCTTCAGCAAAGGAGACGG | + |
|
Preference number: 2 (lower is better) Translates to: SGCFLWSNCGGLHGLGEHVVQTS*LQQRRR Trigger: CCGTCTCCTTTGCTGAAGGCACGAAGTTTGCACCAC...GTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACTTTGGGACAGCGGGAGCTGCACTaGGCTCCGAAGAATCCAGGT | + |
|
Preference number: 2 (lower is better) Translates to: FRPRDRRRGLGIALFTLGQRELH*APKNPG Trigger: ACCTGGATTCTTCGGAGCCCAGTGCAGCTCCCGCTG...TCCCAAAGTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | AATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCAGCCAGGGTCACAGTaGCACAAGCCTGTCTTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: NAISQTSGCFLWSNCGGLQPGSQ*HKPVFG Trigger: CCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTG...GAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | CCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACTTTGGGATCGGTGCCTGCAGGACATaGCTGCTTGCACTGAGTACC | + |
|
Preference number: 2 (lower is better) Translates to: PTQRSAQRLRDSTLYFGIGACRT*LLALST Trigger: GGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACC...GATCCCAAAGTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR TCA 90 bp | GTTTCCCAAACGACGAAAGACAGACCAGACAGGACCCTCAGGTTTCTGAGGTGTGTCTCCTCCTTCCTCTaGCCTTGGTCTCCGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: VSQTTKDRPDRTLRFLRCVSSFL*PWSPLR Trigger: CCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGAC...ACACCTCAGAAACCTGAGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTGGGAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACTTTGGGAGTCTCACGACAGTCGTaGCCCCAGTACTGTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: FRPRDRRRGLGIALFTLGVSRQS*PQYCPG Trigger: TCCAGGACAGTACTGGGGCCACGACTGTCGTGAGAC...TCCCAAAGTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTGGGAGAGCACGCATTCAGCTCACAGTaGCCACAGCTTTCTTTGCAC | + |
|
Preference number: 2 (lower is better) Translates to: SGCFLWSNCGGLHGLGEHAFSSQ*PQLSLH Trigger: GTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAATGC...GTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | CCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAAAGTCTGTCACAGCTATaGCATCATTTTCAGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: PCRRLLLPLTLVSAQAFQSLSQL*HHFQAQ Trigger: TTGTGCCTGAAAATGATGCCATAGCTGTGACAGACT...TTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR TCA 90 bp | TCTGATCTTTCTGGTAGTTTCCCAAACGACGAAAGACAGACCAGACAGGACCCTGTCTCCTCCTTCCTCTaGCCTTGGTCTCCGCTCAGG | + |
|
Preference number: 2 (lower is better) Translates to: SDLSGSFPNDERQTRQDPVSSFL*PWSPLR Trigger: CCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGAC...AGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTGGGAAACTACCAGAAAGATCAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR GCA 90 bp | CCATACCTGCTGCTTCATTCTGAAAAAGGCAGCCCCATTTCTCTCAGGCCTGTCGCTTTCTTTGCACTGTaGCCCATAGTGGCCAGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: PYLLLHSEKGSPISLRPVAFFAL*PIVARV Trigger: AACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGC...GACAGGCCTGAGAGAAATGGGGCTGCCTTTTTCAGAATGAAGCAGCAGGTATGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | CAAACGACGAAAGACAGACCAGACAGGACCCTCAGGTTTCTGAGGTGTCCCTGCAGTCTGTCACAGCTATaGCATCATTTTCAGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: QTTKDRPDRTLRFLRCPCSLSQL*HHFQAQ Trigger: TTGTGCCTGAAAATGATGCCATAGCTGTGACAGACT...GCAGGGACACCTCAGAAACCTGAGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR CCA 90 bp | AGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGAAAAGCCCTAGTCTGTCACAGCTATaGCATCATTTTCAGGCACAA | + |
|
Preference number: 2 (lower is better) Translates to: RWKRIVSGQNSEQWRKSPSLSQL*HHFQAQ Trigger: TTGTGCCTGAAAATGATGCCATAGCTGTGACAGACT...AGGGCTTTTCCTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GGCCCCACCAGCCCGGCGGGCATACACAGGTTCCAGTaGCCTGGTCACAGCGTGAGGCTGGGTTGCACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GPTSPAGIHRFQ*PGHSVRLGCTG Trigger: GCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCCCGCCGGGCTGGTGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | ACGCAGCGGCCGGAGTCCTGCATGCAGGGCGAGGTGTaGCAGTTGCAACTGAAGCTGCAGCGGCGGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: TQRPESCMQGEV*QLQLKLQRRPH Trigger: GTGGGGCCGCCGCTGCAGCTTCAGTTGCAACTGCCACACCTCGCCCTGCATGCAGGACTCCGGCCGCTGCGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | CGCTGCATTGGCCTCGCACACACTGGCACTTACGACTaGACTCCGGACCCCACCAGCCCGGCAGGCAGACGC | + |
|
Preference number: 3 (lower is better) Translates to: RCIGLAHTGTYD*TPDPTSPAGRR Trigger: GCGTCTGCCTGCCGGGCTGGTGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CCACCAGCCAGGGTCACAGTGGCACAAGCCTGTCTTTaGGTCGCACTGTCCGTGGGGGCCGCAGGTGCAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PPARVTVAQACL*VALSVGAAGAG Trigger: CCCTGCACCTGCGGCCCCCACGGACAGTGCGACCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTGGTGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CCTGGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTaGCCTGGTTCCGACCCAGAGATCGGCGCAGAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PGRAQHLELSQR*PGSDPEIGAEA Trigger: AGCCTCTGCGCCGATCTCTGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | CAATCACCCGTGGCCGGTTCGCACTGGCCACGTGGATaGCAGGGGCAGGTCTCACGACAGTCGTGGCCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QSPVAGSHWPRG*QGQVSRQSWPQ Trigger: CTGGGGCCACGACTGTCGTGAGACCTGCCCCTGTCATCCACGTGGCCAGTGCGAACCGGCCACGGGTGATTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | GGACTCCATGGCCTGGGAGAGCACAGCACCTGGAGCTaGGCCAGCGCTGGCCTGGTTCCGACCCAGAGATCG | + |
|
Preference number: 3 (lower is better) Translates to: GLHGLGEHSTWS*ASAGLVPTQRS Trigger: CGATCTCTGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGGCCATGGAGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CACCAGCCCGGCGGGCATACACAGGTTCCAGTGGCCTaGTCACAGCGTGAGGCTGGGTTGCACTGGCATGGG | + |
|
Preference number: 3 (lower is better) Translates to: HQPGGHTQVPVA*SQREAGLHWHG Trigger: CCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTGTGTATGCCCGCCGGGCTGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GAGAGCACAGCACCTGGAGCTGAGCCAGCGCTGGCCTaGTTCCGACCCAGAGATCGGCGCAGAGGCTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ESTAPGAEPALA*FRPRDRRRGLG Trigger: CCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTGGCCTGGTTCCGACCCAGAGCCCCTCTGGGCATaGGCAGGGCATAGAGCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: PGRAQHLELSQRWPGSDPEPLWA*AGHRAV Trigger: AACTGCTCTATGCCCTGCCAATGCCCAGAGGGGCTC...TGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | GGCTGGGTTGCACTGGCATGGGCGACGACACGTGGGTaGCCACCAGCCAGGGTCACAGTGGCACAAGCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GWVALAWATTRG*PPARVTVAQAC Trigger: ACAGGCTTGTGCCACTGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | AGGTTCCAGTGGCCTGGTCACAGCGTGAGGCTGGGTTaGACTGGCATGGGCGACGACACGTGGGTGACCACC | + |
|
Preference number: 3 (lower is better) Translates to: RFQWPGHSVRLG*TGMGDDTWVTT Trigger: GGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | CCAAAGGTGCCAAGGGGACAAGGGTTCTCACACCTGTaGCCCAGCCAACCGGGGTCGCAGTGCTGGCAGTGC | + |
|
Preference number: 3 (lower is better) Translates to: PKVPRGQGFSHL*PSQPGSQCWQC Trigger: GCACTGCCAGCACTGCGACCCCGGTTGGCTGGGGCACAGGTGTGAGAACCCTTGTCCCCTTGGCACCTTTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | TTGGCAATCACCCGTGGCCGGTTCGCACTGGCCACGTaGATGACAGGGGCAGGTCTCACGACAGTCGTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: LAITRGRFALAT*MTGAGLTTVVA Trigger: GGCCACGACTGTCGTGAGACCTGCCCCTGTCATCCACGTGGCCAGTGCGAACCGGCCACGGGTGATTGCCAA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GTGAGGCTGGGTTGCACTGGCATGGGCGACGACACGTaGGTGACCACCAGCCAGGGTCACAGTGGCACAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VRLGCTGMGDDT*VTTSQGHSGTS Trigger: GCTTGTGCCACTGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | CGCAAGTCCCCTGAGCACAGGCAGGGCAGGTTGAGCTaGAGCCCTTCCCAAAGGTGCCAAGGGGACAAGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RKSPEHRQGRLS*SPSQRCQGDKG Trigger: ACCCTTGTCCCCTTGGCACCTTTGGGAAGGGCTGCAGCTCAACCTGCCCTGCCTGTGCTCAGGGGACTTGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CGACGACACGTGGGTGACCACCAGCCAGGGTCACAGTaGCACAAGCCTGTCTTTGGGTCGCACTGTCCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: RRHVGDHQPGSQ*HKPVFGSHCPW Trigger: CCACGGACAGTGCGACCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GGATGGCCTCTTGGCCCTAGCCAGGCTGGAGGTACGTaGAATGGGGAATGGTGTGGAGGCATCCTCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: GWPLGPSQAGGT*NGEWCGGILRG Trigger: CCCCCTGAGGATGCCTCCACACCATTCCCCATTCCACGTACCTCCAGCCTGGCTAGGGCCAAGAGGCCATCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | CAGACACATTCCCCAGTCACGGCATCGCAAGTCCCCTaGGCACAGGCAGGGCAGGTTGAGCTGCAGCCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: QTHSPVTASQVP*AQAGQVELQPF Trigger: GAAGGGCTGCAGCTCAACCTGCCCTGCCTGTGCTCAGGGGACTTGCGATGCCGTGACTGGGGAATGTGTCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | GGTACCAGGATGCCCACAATGAGGGCGTTCTTACCATaGCGGCCCAGCTGGCAGGTCCCAGACACAGGGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GTRMPTMRAFLP*RPSWQVPDTGW Trigger: CCACCCTGTGTCTGGGACCTGCCAGCTGGGCCGTCATGGTAAGAACGCCCTCATTGTGGGCATCCTGGTACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | AGCGGGGGCACTGCCCAGTGCACCTCTCACCAAAGGTaGCTGCAGGACATGGCTGCTTGCACTGAGTACCGT | + |
|
Preference number: 3 (lower is better) Translates to: SGGTAQCTSHQR*LQDMAACTEYR Trigger: ACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCCCGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | TGGCCAGAAGTAACGCTGCATTGGCCTCGCACACACTaGCACTTACGACTGCACTCCGGACCCCACCAGCCC | + |
|
Preference number: 3 (lower is better) Translates to: WPEVTLHWPRTH*HLRLHSGPHQP Trigger: GGGCTGGTGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GGCCGTAGGAGCATCCTCCTCTGTGTTCACTTGCTCTaGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GRRSILLCVHLL*ACRLLRLLPFR Trigger: CCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTaGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSSGLTAVDSMA*ESTAPGAEPAL Trigger: CAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR-3UTR CAA 90 bp | CTCTTCTCCAGAGTCAGGATCAGAAGAGAAGGAGTCGTCAGAGGCCCAGCCGGCCTCTCAGGCCTGTCCTaGGGGTCCAGTCGGGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LFSRVRIRREGVVRGPAGLSGLS*GSSRVP Trigger: AGGAACCCGACTGGACCCCAAGGACAGGCCTGAGAG...GCCGGCTGGGCCTCTGACGACTCCTTCTCTTCTGATCCTGACTCTGGAGAAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | TGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTaGCCTTGGTCTCCGCTCAGGCCTTCCAATCCCACC | + |
|
Preference number: 3 (lower is better) Translates to: WRKSPVAVSSFL*PWSPLRPSNPT Trigger: GGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | TCTCTCAGGCCTGTCCTTGGGGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCAGACGATGCCCATGAG | + |
|
Preference number: 3 (lower is better) Translates to: SLRPVLGVQSGS*AAVGTADDAHE Trigger: CTCATGGGCATCGTCTGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGACCCCAAGGACAGGCCTGAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | GGGGCACTGCCCAGTGCACCTCTCACCAAAGGTGCCTaGAGGACATGGCTGCTTGCACTGAGTACCGTTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GALPSAPLTKGA*RTWLLALSTVP Trigger: TGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGGCAGTGCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | CTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTTaGTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: LVAVGASSSVFT*SGPVDSSASCP Trigger: AGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | TGGCCCCAGTACTGTCCTGGACAGCGGGAGCTGCACTaGGCTCCGAAGAATCCAGGTTTACACCGACAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: WPQYCPGQRELH*APKNPGLHRQR Trigger: CCTCTGTCGGTGTAAACCTGGATTCTTCGGAGCCCAGTGCAGCTCCCGCTGTCCAGGACAGTACTGGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | CGTTCCAGCCTGGCTTGCAGGACTCACAGTTGCCGGTaGCTGGAGAGCATGTGGCATTCAGCTCACAGTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RSSLACRTHSCR*LESMWHSAHSG Trigger: GCCACTGTGAGCTGAATGCCACATGCTCTCCAGTCACCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | CCCCAGAGCTTCGGCCATTCTGTGGTGCAAACTTCGTaGCTTCAGCAAAGGAGACGGATGGCCTCTTGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: PQSFGHSVVQTS*LQQRRRMASWP Trigger: GGGCCAAGAGGCCATCCGTCTCCTTTGCTGAAGGCACGAAGTTTGCACCACAGAATGGCCGAAGCTCTGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | ATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTaGGGTGGACTCCATGGCCTGGGAGAGCACAGCACC | + |
|
Preference number: 3 (lower is better) Translates to: ISQTSGCFLWSN*GGLHGLGEHST Trigger: GGTGCTGTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | TCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTaGTGTGGCGGCACGGACATGGGCACAACATTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: STGFPGTHQGPQ*CGGTDMGTTFS Trigger: TGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GGAGGGCAGGAACAGTGGCCAGAAGTAACGCTGCATTaGCCTCGCACACACTGGCACTTACGACTGCACTCC | + |
|
Preference number: 3 (lower is better) Translates to: GGQEQWPEVTLH*PRTHWHLRLHS Trigger: GGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CAGCGGATTCCATGGAAGCCAGGAGGGCAGGAACAGTaGCCAGAAGTAACGCTGCATTGGCCTCGCACACAC | + |
|
Preference number: 3 (lower is better) Translates to: QRIPWKPGGQEQ*PEVTLHWPRTH Trigger: GTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCCTGGCTTCCATGGAATCCGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CCCAGTGCACCTCTCACCAAAGGTGCCTGCAGGACATaGCTGCTTGCACTGAGTACCGTTCCAGCCTGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PSAPLTKGACRT*LLALSTVPAWL Trigger: AAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGTGCACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | TCCTGTTCCAGGGAACTGCCTCCAGCGTCTGGCTCCTaGACAGTCCCTGAGCTCTCAATGCCATCTCCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SCSRELPPASGS*TVPELSMPSPR Trigger: TCTGGGAGATGGCATTGAGAGCTCAGGGACTGTCCAGGAGCCAGACGCTGGAGGCAGTTCCCTGGAACAGGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | TTCCTGAGCAGCAGTAGGCACAGCAGACGATGCCCATaGGGAGCAGCAGCAGAGGTACCAGGATGCCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: FLSSSRHSRRCP*GAAAEVPGCPQ Trigger: TTGTGGGCATCCTGGTACCTCTGCTGCTGCTCCTCATGGGCATCGTCTGCTGTGCCTACTGCTGCTCAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | ACCTCTCACCAAAGGTGCCTGCAGGACATGGCTGCTTaGACTGAGTACCGTTCCAGCCTGGCTTGCAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: TSHQRCLQDMAA*TEYRSSLACRT Trigger: AGTCCTGCAAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | AGGACATGGCTGCTTGCACTGAGTACCGTTCCAGCCTaGCTTGCAGGACTCACAGTTGCCGGTGACTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: RTWLLALSTVPA*LAGLTVAGDWR Trigger: TCTCCAGTCACCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACTCAGTGCAAGCAGCCATGTCCT 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CCACAGATCCTGAGCTCTCCTGGATGCCTCCATCAGTaGTCTCCGCACACTCAGCTACCATCTGGCTACCAG | + |
|
Preference number: 3 (lower is better) Translates to: PQILSSPGCLHQ*SPHTQLPSGYQ Trigger: CTGGTAGCCAGATGGTAGCTGAGTGTGCGGAGACCACTGATGGAGGCATCCAGGAGAGCTCAGGATCTGTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | CTCACCAAGGTCCTCAGTGCTGTGGCGGCACGGACATaGGCACAACATTCTCATACAGGGGCTCCTCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: LTKVLSAVAART*AQHSHTGAPLA Trigger: AGCAAGAGGAGCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | AGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTaGCGGCACGGACATGGGCACAACATTCTCATACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLPGNSPRSSVL*RHGHGHNILIQ Trigger: CTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR TCA 72 bp | TCAGCTACCATCTGGCTACCAGGTGGAAGTTGGCCGTaGCTAGTGGCAGGATCTCCAGAGCTTGTGGCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: SATIWLPGGSWP*LVAGSPELVAV Trigger: TACGGCCACAAGCTCTGGAGATCCTGCCACTAGTCACGGCCAACTTCCACCTGGTAGCCAGATGGTAGCTGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | AGCTTTCTTTGCACTGTGCCCCATAGTGGCCAGGGTTaGAAGGCAGCTCACAGCGGATTCCATGGAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: SFLCTVPHSGQG*KAAHSGFHGSQ Trigger: CTGGCTTCCATGGAATCCGCTGTGAGCTGCCTTGCAACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | GCTGGAGAGATCCCCAGAGCTTCGGCCATTCTGTGGTaGAAACTTCGTGCCTTCAGCAAAGGAGACGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: AGEIPRASAILW*KLRAFSKGDGW Trigger: CCATCCGTCTCCTTTGCTGAAGGCACGAAGTTTGCACCACAGAATGGCCGAAGCTCTGGGGATCTCTCCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | ATTCAGCTCACAGTGGCCACAGCTTTCTTTGCACTGTaGCCCATAGTGGCCAGGGTTGCAAGGCAGCTCACA | + |
|
Preference number: 3 (lower is better) Translates to: IQLTVATAFFAL*PIVARVARQLT Trigger: TGTGAGCTGCCTTGCAACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR GCA 72 bp | ATGTGGCATTCAGCTCACAGTGGCCACAGCTTTCTTTaGACTGTGCCCCATAGTGGCCAGGGTTGCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: MWHSAHSGHSFL*TVPHSGQGCKA Trigger: TGCCTTGCAACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAATGCCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| 3UTR CCA 72 bp | GTTGAGCACCTCTGGAGAGTCTCTTGGGTTTTCGTATaGGGCTGGAGAGATCCCCAGAGCTTCGGCCATTCT | + |
|
Preference number: 3 (lower is better) Translates to: VEHLWRVSWVFV*GWRDPQSFGHS Trigger: AGAATGGCCGAAGCTCTGGGGATCTCTCCAGCCCCATACGAAAACCCAAGAGACTCTCCAGAGGTGCTCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCACGGACATGGGCCGGCAGCGGGGGCACTaGCCAGTGCACCTCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GFPGTHQGPQCCGGTDMGRQRGH*PVHLSP Trigger: TGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCG...GCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTGGCCTGGTTCCGACCCAGCATCGCAAGTCCCCTaGGCACAGGCAGGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PGRAQHLELSQRWPGSDPASQVP*AQAGQV Trigger: AACCTGCCCTGCCTGTGCTCAGGGGACTTGCGATGC...TGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTGGCCTCGGCAGCGGGGGCACTaGCCAGTGCACCTCTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSGLPIPPRARPTTSWPRQRGH*PVHLSP Trigger: TGGTGAGAGGTGCACTGGGCAGTGCCCCCGCTGCCG...AGGCCAGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| 3UTR CAA 72 bp | ACCACCAGCCAGGGTCACAGTGGCACAAGCCTGTCTTaGGGTCGCACTGTCCGTGGGGGCCGCAGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TTSQGHSGTSLS*GRTVRGGRRCR Trigger: CCTGCACCTGCGGCCCCCACGGACAGTGCGACCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTGGTGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | GGCCTCGCACACACTGGCACTTACGACTGCACTCCGGACCCCACCAGCCCGGCAGATCCCTGGGTCCCCTaGGTCCAGAGCAGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: GLAHTGTYDCTPDPTSPADPWVP*VQSSNS Trigger: ACTGTTGCTGCTCTGGACTCAGGGGACCCAGGGATC...TGCCGGGCTGGTGGGGTCCGGAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | CTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTGGCCTGGCCTGGTCACAGCGTaGGGCTGGGTTGCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LRSGLPIPPRARPTTSWPGLVTA*GWVALA Trigger: TGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCC...AGGCCAGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| 3UTR CAA 72 bp | CAGGTTCCAGTGGCCTGGTCACAGCGTGAGGCTGGGTaGCACTGGCATGGGCGACGACACGTGGGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVPVAWSQREAG*HWHGRRHVGDH Trigger: GTGGTCACCCACGTGTCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| CDS-3UTR GCA 90 bp | TCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACACGTGGGGGCCGCAGGTaGAGGGGAACTCACAGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SDLGLRSGLPIPPRARPTRGGRR*RGTHRA Trigger: GGCTCTGTGAGTTCCCCTGCACCTGCGGCCCCCACG...TGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | GGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCACGGACATGGGCCAGGGCAGGTTGAGCTaGAGCCCTTCCCAAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GFPGTHQGPQCCGGTDMGQGRLS*SPSQRC Trigger: GCACCTTTGGGAAGGGCTGCAGCTCAACCTGCCCTG...GCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GAGCTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTTGCTCTGGGCCTGTAGGGTCGCACTGTCCGTaGGGGCCGCAGGTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ELVAVGASSSVFTCSGPVGSHCP*GPQVQG Trigger: CCCCTGCACCTGCGGCCCCCACGGACAGTGCGACCC...TACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAGCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | GGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGCGACGACACGTGGGTaGCCACCAGCCAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GGKALSPSPPSSDLGLRSATTRG*PPARVT Trigger: TGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCGC...TGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCGGCCTGGTCACAGCGTaGGGCTGGGTTGCACTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRRLLLPLTLVSAQAFQSGLVTA*GWVALA Trigger: TGCCAGTGCAACCCAGCCTCACGCTGTGACCAGGCC...GGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTTGTGGCAGTTGCAACTaGAGCTGCAGCGGCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVSAQAFQSHLGPDPQPACGSCN*SCSGGP Trigger: GGGGCCGCCGCTGCAGCTTCAGTTGCAACTGCCACA...AGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGAGAGCACAGCACCTGGAGCTGAGCCAGCGCTGGCCTGGTTCCGACCCAATACACAGGTTCCAGTaGCCTGGTCACAGCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGRAQHLELSQRWPGSDPIHRFQ*PGHSVR Trigger: CCTCACGCTGTGACCAGGCCACTGGAACCTGTGTAT...TGGGTCGGAACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTGCTCTCCCAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CACTTGCTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCCTTCAGGACGGGGTTGGTGGCAGAGCCCCTCTaGGCATTGGCAGGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: HLLWACRLLRLLPFRTGLVAEPL*ALAGHR Trigger: TCTATGCCCTGCCAATGCCCAGAGGGGCTCTGCCAC...CAACCCCGTCCTGAAGGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCACGGACATGGGCGACCATCTCTGTCCTTaGGGTCCAGTCGGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GFPGTHQGPQCCGGTDMGDHLCP*GPVGFL Trigger: CAGGAACCCGACTGGACCCCAAGGACAGAGATGGTC...GCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAGCATCGCAAGTCCCCTaGGCACAGGCAGGGCAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: SDLGLRSGLPIPPRARPTASQVP*AQAGQV Trigger: AACCTGCCCTGCCTGTGCTCAGGGGACTTGCGATGC...TGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTGGACAGCGGGAGCTaGACTGGGCTCCGAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: GKALSPSPPSSDLGLRSGLDSGS*TGLRRI Trigger: GATTCTTCGGAGCCCAGTGCAGCTCCCGCTGTCCAG...GCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CCCCATCCACAGGCTTCCCGGGAACTCACCAAGGTCCTCAGTGCTGTGGCGGCACATAGTGGCCAGGGTTaGAAGGCAGCTCACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PHPQASRELTKVLSAVAAHSGQG*KAAHSG Trigger: TCCGCTGTGAGCTGCCTTGCAACCCTGGCCACTATG...TGCCGCCACAGCACTGAGGACCTTGGTGAGTTCCCGGGAAGCCTGTGGATGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | GGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCGTTCCAGCCTGGCTTaGAGGACTCACAGTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKALSPSPPSSDLGLRSGRSSLA*RTHSCR Trigger: CCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACG...GCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GACGGATGGCCTCTTGGCCCTAGCCAGGCTGGAGGTACGTGGAATGGGGAATGGGCACAAGCCTGTCTTTaGGTCGCACTGTCCGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: DGWPLGPSQAGGTWNGEWAQACL*VALSVG Trigger: CCCCACGGACAGTGCGACCCAAAGACAGGCTTGTGC...CCATTCCCCATTCCACGTACCTCCAGCCTGGCTAGGGCCAAGAGGCCATCCGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACAGGTTCCAGTGGCCTaGTCACAGCGTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARQVPVA*SQREAG Trigger: CCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTG...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTGGCCTAGCCCCTCTGGGCATTaGCAGGGCATAGAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRSGLPIPPRARPTTSWPSPSGH*QGIEQL Trigger: CAACTGCTCTATGCCCTGCCAATGCCCAGAGGGGCT...AGGCCAGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| 3UTR CAA 72 bp | GCTTGTGGCCGTAGGAGCATCCTCCTCTGTGTTCACTaGCTCTGGGCCTGTAGACTCCTCCGCCTCCTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ACGRRSILLCVH*LWACRLLRLLP Trigger: GGGCAGGAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCTACGGCCACAAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | CTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSPPSSDLGLRSGLPIVQSGS*AAVGTA Trigger: TGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGAC...GATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAACATAGTGGCCAGGGTTaGAAGGCAGCTCACAGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: PCRRLLLPLTLVSAQAFQHSGQG*KAAHSG Trigger: TCCGCTGTGAGCTGCCTTGCAACCCTGGCCACTATG...TTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CTTCGTGCCTTCAGCAAAGGAGACGGATGGCCTCTTGGCCCTAGCCAGGCTGGACGTTCCAGCCTGGCTTaGAGGACTCACAGTTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LRAFSKGDGWPLGPSQAGRSSLA*RTHSCR Trigger: CCGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACG...TCCAGCCTGGCTAGGGCCAAGAGGCCATCCGTCTCCTTTGCTGAAGGCACGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CCAGCGCTGGCCTGGTTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCAACCTCTCACCAAAGGTaGCTGCAGGACATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PALAWFRPRDRRRGLGIATSHQR*LQDMAA Trigger: AGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGT...TGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAACCAGGCCAGCGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | TGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCAGGGCAGGTTGAGCTaGAGCCCTTCCCAAAGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CRRLLLPLTLVSAQAFQSQGRLS*SPSQRC Trigger: GCACCTTTGGGAAGGGCTGCAGCTCAACCTGCCCTG...GGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAATTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGGGGTCGCACTGTCCGTaGGGGCCGCAGGTGCAGGGG | + |
|
Preference number: 4 (lower is better) Translates to: TEFRTMEEKPCRRLLLPLGSHCP*GPQVQG Trigger: CCCCTGCACCTGCGGCCCCCACGGACAGTGCGACCC...CAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCAGCGTCTGGCTCCTaGACAGTCCCTGAGCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARPASGS*TVPELS Trigger: TGAGAGCTCAGGGACTGTCCAGGAGCCAGACGCTGG...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| 3UTR CAA 72 bp | GAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTaGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: EKPCRRLLLPLT*VSAQAFQSHLG Trigger: CCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | TCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGGATCCCTGGGTCCCCTaGGTCCAGAGCAGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGTKPNLVHSSFSIPLSLDPWVP*VQSSNS Trigger: ACTGTTGCTGCTCTGGACTCAGGGGACCCAGGGATC...CAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | GGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCGGGATGGTGCATTCTTaGTCTTTCTGCCTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GKALSPSPPSSDLGLRSGGMVHS*SFCLQP Trigger: CGGCTGGAGGCAGAAAGATCAAGAATGCACCATCCC...GCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TTTCGTATGGGGCTGGAGAGATCCCCAGAGCTTCGGCCATTCTGTGGTGCAAACGCGACGACACGTGGGTaGCCACCAGCCAGGGTCACA | + |
|
Preference number: 4 (lower is better) Translates to: FRMGLERSPELRPFCGANATTRG*PPARVT Trigger: TGTGACCCTGGCTGGTGGTCACCCACGTGTCGTCGC...GTTTGCACCACAGAATGGCCGAAGCTCTGGGGATCTCTCCAGCCCCATACGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TGTTTCCTCTGGTCTAACTGCGGTGGACTCCATGGCCTGGGAGAGCACAGCACCACAGGCAGGGCAGGTTaGGCTGCAGCCCTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: CFLWSNCGGLHGLGEHSTTGRAG*AAALPK Trigger: TTTGGGAAGGGCTGCAGCTCAACCTGCCCTGCCTGT...GGTGCTGTGCTCTCCCAGGCCATGGAGTCCACCGCAGTTAGACCAGAGGAAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGAAGCAGACGATGCCCATaGGGAGCAGCAGCAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARSRRCP*GAAAEV Trigger: TACCTCTGCTGCTGCTCCTCATGGGCATCGTCTGCT...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | TGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCTCCTGGACAGTCCCTaGGCTCTCAATGCCATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CRRLLLPLTLVSAQAFQSLLDSP*ALNAIS Trigger: GGAGATGGCATTGAGAGCTCAGGGACTGTCCAGGAG...GGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR GCA 90 bp | CTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCGGAGCTCAGAGGGGCTaGTGCCTTTACAGACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSPPSSDLGLRSGLPIGAQRG*CLYRRA Trigger: AGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCC...GATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCTGGACAGCGGGAGCTaGACTGGGCTCCGAAGAATC | + |
|
Preference number: 4 (lower is better) Translates to: SGTKPNLVHSSFSIPLSLLDSGS*TGLRRI Trigger: GATTCTTCGGAGCCCAGTGCAGCTCCCGCTGTCCAG...CAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAAACCTCTCACCAAAGGTaGCTGCAGGACATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCRRLLLPLTLVSAQAFQTSHQR*LQDMAA Trigger: AGCAGCCATGTCCTGCAGGCACCTTTGGTGAGAGGT...TTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | AATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCGGGTTCTCACACCTGTaGCCCAGCCAACCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: NAISQTSGCFLWSNCGGLGFSHL*PSQPGS Trigger: CGACCCCGGTTGGCTGGGGCACAGGTGTGAGAACCC...GAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | GCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCATCCCTGTTCCAGGGAACTaGCTCCAGCGTCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSPIWSTAASASRSPCIPVPGN*LQRLAP Trigger: AGGAGCCAGACGCTGGAGGCAGTTCCCTGGAACAGG...GATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | GCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCATCCAGCGGGAGCTGCACTaGGCTCCGAAGAATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQSPIWSTAASASRSPCIQRELH*APKNPG Trigger: ACCTGGATTCTTCGGAGCCCAGTGCAGCTCCCGCTG...GATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CAGTGCTGTGGCGGCACGGACATGGGCACAACATTCTCATACAGGGGCTCCTCTCAGCGGGAGCTGCACTaGGCTCCGAAGAATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: QCCGGTDMGTTFSYRGSSQRELH*APKNPG Trigger: ACCTGGATTCTTCGGAGCCCAGTGCAGCTCCCGCTG...AGAGGAGCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CTTCGTGCCTTCAGCAAAGGAGACGGATGGCCTCTTGGCCCTAGCCAGGCTGGATCCGTGGAAGCCAGCTaGGCAGGAACTGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRAFSKGDGWPLGPSQAGSVEAS*AGTVAA Trigger: AGCTGCAACAGTTCCTGCCCAGCTGGCTTCCACGGA...TCCAGCCTGGCTAGGGCCAAGAGGCCATCCGTCTCCTTTGCTGAAGGCACGAAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | CAGTGCTGTGGCGGCACGGACATGGGCACAACATTCTCATACAGGGGCTCCTCTAGCAGACGATGCCCATaGGGAGCAGCAGCAGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QCCGGTDMGTTFSYRGSSSRRCP*GAAAEV Trigger: TACCTCTGCTGCTGCTCCTCATGGGCATCGTCTGCT...AGAGGAGCCCCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCCACAGCACCTGGAGCTaGGCCAGCGCTGGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHFQAQSPIWSTAASASRHSTWS*ASAGLV Trigger: AACCAGGCCAGCGCTGGCTCAGCTCCAGGTGCTGTG...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR GCA 90 bp | CCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAAGCTTTCTTTGCACTGTaGCCCATAGTGGCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: PCRRLLLPLTLVSAQAFQAFFAL*PIVARV Trigger: AACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGC...TTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCAGCCCTTCCCAAAGGTaGCAAGGGGACAAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPSPPSSDLGLRSGLPISPSQR*QGDKGS Trigger: AGAACCCTTGTCCCCTTGGCACCTTTGGGAAGGGCT...GATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGAAGCCCTTCCCAAAGGTaGCAAGGGGACAAGGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARSPSQR*QGDKGS Trigger: AGAACCCTTGTCCCCTTGGCACCTTTGGGAAGGGCT...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGAATACACAGGTTCCAGTaGCCTGGTCACAGCGTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARIHRFQ*PGHSVR Trigger: CCTCACGCTGTGACCAGGCCACTGGAACCTGTGTAT...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTTCACAGCGGATTCCATaGAAGCCAGGAGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LVSAQAFQSHLGPDPQPASQRIP*KPGGQE Trigger: TTCCTGCCCTCCTGGCTTCCATGGAATCCGCTGTGA...AGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGAGCAGTTGTTTCCGTaGAAGCCAGCTGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EEKPCRRLLLPLTLVSAQEQLFP*KPAGQE Trigger: TTCCTGCCCAGCTGGCTTCCACGGAAACAACTGCTC...CTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCAGGCTGGAGGTACGTaGAATGGGGAATGGTGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: CRRLLLPLTLVSAQAFQSQAGGT*NGEWCG Trigger: TCCACACCATTCCCCATTCCACGTACCTCCAGCCTG...GGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR TCA 90 bp | GGCCTGGTTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACGGGATGGTGCATTCTTaGTCTTTCTGCCTCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: GLVPTQRSAQRLRDSTLYGMVHS*SFCLQP Trigger: CGGCTGGAGGCAGAAAGATCAAGAATGCACCATCCC...GTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAACCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | AATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGACTCGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NAISQTSGCFLWSNCGGLVQSGS*AAVGTA Trigger: TGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGAC...GAGTCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR TCA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCAGTGGCCACAGATCCTaGGCTCTCCTGGATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NNGGKALSPSPPSSDLGLSGHRS*ALLDAS Trigger: GGAGGCATCCAGGAGAGCTCAGGATCTGTGGCCACT...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR GCA 90 bp | TCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAGTGGTGCAAACTTCGTaGCTTCAGCAAAGGAGACGG | + |
|
Preference number: 4 (lower is better) Translates to: SDLGLRSGLPIPPRARPTVVQTS*LQQRRR Trigger: CCGTCTCCTTTGCTGAAGGCACGAAGTTTGCACCAC...TGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | CAAGGTCCTCAGTGCTGTGGCGGCACGGACATGGGCACAACATTCTCATACAGGGTCTCACGACAGTCGTaGCCCCAGTACTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QGPQCCGGTDMGTTFSYRVSRQS*PQYCPG Trigger: TCCAGGACAGTACTGGGGCCACGACTGTCGTGAGAC...CCTGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCACAGCACTGAGGACCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCGTGGCAGAGCCCCTCTaGGCATTGGCAGGGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: FSGTKPNLVHSSFSIPLSVAEPL*ALAGHR Trigger: TCTATGCCCTGCCAATGCCCAGAGGGGCTCTGCCAC...GGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACATCTGGCTACCAGGTaGAAGTTGGCCGTGACTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSSDLGLRSGLPIPPRARHLATR*KLAVTS Trigger: ACTAGTCACGGCCAACTTCCACCTGGTAGCCAGATG...TCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| 3UTR CAA 72 bp | AGGAGGGCAGGAACAGTGGCCAGAAGTAACGCTGCATaGGCCTCGCACACACTGGCACTTACGACTGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RRAGTVARSNAA*ASHTLALTTAL Trigger: GAGTGCAGTCGTAAGTGCCAGTGTGTGCGAGGCCAATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCGATCCCTGGGTCCCCTaGGTCCAGAGCAGCAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHFQAQSPIWSTAASASRDPWVP*VQSSNS Trigger: ACTGTTGCTGCTCTGGACTCAGGGGACCCAGGGATC...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR TCA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGACAGGCAGGGCAGGTTaGGCTGCAGCCCTTCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPTGRAG*AAALPK Trigger: TTTGGGAAGGGCTGCAGCTCAACCTGCCCTGCCTGT...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTGGCCTCCTCACAGATGGGGATaGTGCATTCTTGATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRSGLPIPPRARPTTSWPPHRWG*CILDLS Trigger: AGAAAGATCAAGAATGCACCATCCCCATCTGTGAGG...AGGCCAGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGGCACAAGCCTGTCTTTaGGTCGCACTGTCCGTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPAQACL*VALSVG Trigger: CCCCACGGACAGTGCGACCCAAAGACAGGCTTGTGC...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | ACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCATCCCAGTACCGTTCCAGCCTaGCTTGCAGGACTCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TKPNLVHSSFSIPLSLHPSTVPA*LAGLTV Trigger: AACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACT...GGGATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCAGCCCCTCTGGGCATTaGCAGGGCATAGAGCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSGTKPNLVHSSFSIPLSSPSGH*QGIEQL Trigger: CAACTGCTCTATGCCCTGCCAATGCCCAGAGGGGCT...GGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTGGCCTCTAACCCTTGCCTCTTTCACGGCAGAGTTTCTGTTTAGTCTGGTCCCAGACACAGGGTaGCAGAGCCCCTCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TSWPLTLASFTAEFLFSLVPDTG*QSPSGH Trigger: ATGCCCAGAGGGGCTCTGCCACCCTGTGTCTGGGAC...CAGACTAAACAGAAACTCTGCCGTGAAAGAGGCAAGGGTTAGAGGCCAGCTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCATCTCTTGGGTTTTCGTATaGGGCTGGAGAGATCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AQSPIWSTAASASRSPCISWVFV*GWRDPQ Trigger: CTGGGGATCTCTCCAGCCCCATACGAAAACCCAAGA...GATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| 3UTR CAA 72 bp | CGCACACTCAGCTACCATCTGGCTACCAGGTGGAAGTaGGCCGTGACTAGTGGCAGGATCTCCAGAGCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTLSYHLATRWK*AVTSGRISRAC Trigger: ACAAGCTCTGGAGATCCTGCCACTAGTCACGGCCAACTTCCACCTGGTAGCCAGATGGTAGCTGAGTGTGCG 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000118243.2 ENSMUST00000123819.2 |
||
| CDS-3UTR GCA 90 bp | GGCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGGAGCTCAGAGGGGCTaGTGCCTTTACAGACGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GIIFRHKAQSGPQQLQHPGAQRG*CLYRRA Trigger: AGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCC...GGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGTACAGGGGCTCCTCTTaGTCCTTCTCTTCCGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPYRGSS*SFSSAC Trigger: GCAGGCGGAAGAGAAGGAGCAAGAGGAGCCCCTGTA...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCGTCTCACGACAGTCGTaGCCCCAGTACTGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHFQAQSPIWSTAASASRVSRQS*PQYCPG Trigger: TCCAGGACAGTACTGGGGCCACGACTGTCGTGAGAC...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCAGCCAGGGTCACAGTaGCACAAGCCTGTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPQPGSQ*HKPVFG Trigger: CCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTG...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CTCAATGCCATCTCCCAGACCTCTGGGTGTTTCCTCTGGTCTAACTGCGGTGGATCACAGCGGATTCCATaGAAGCCAGGAGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNAISQTSGCFLWSNCGGSQRIP*KPGGQE Trigger: TTCCTGCCCTCCTGGCTTCCATGGAATCCGCTGTGA...TCCACCGCAGTTAGACCAGAGGAAACACCCAGAGGTCTGGGAGATGGCATTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCGGTGCCTGCAGGACATaGCTGCTTGCACTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: HHFQAQSPIWSTAASASRGACRT*LLALST Trigger: GGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACC...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCGAGCAGTTGTTTCCGTaGAAGCCAGCTGGGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NNGGKALSPSPPSSDLGLEQLFP*KPAGQE Trigger: TTCCTGCCCAGCTGGCTTCCACGGAAACAACTGCTC...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGCTGGCCTCTAACCCTTGCCTCTTTCACGGCAGAGTTTCTGTTTAGTCTGTCTCAGGCCTGTCCTTaGGGTCCAGTCGGGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TSWPLTLASFTAEFLFSLSQACP*GPVGFL Trigger: CAGGAACCCGACTGGACCCCAAGGACAGGCCTGAGA...CAGACTAAACAGAAACTCTGCCGTGAAAGAGGCAAGGGTTAGAGGCCAGCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCTGTGTTCACTTGCTCTaGGCCTGTAGACTCCTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NNGGKALSPSPPSSDLGLCVHLL*ACRLLR Trigger: GCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACA...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR GCA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCTCGGCCATTCTGTGGTaGAAACTTCGTGCCTTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NNGGKALSPSPPSSDLGLSAILW*KLRAFS Trigger: GCTGAAGGCACGAAGTTTGCACCACAGAATGGCCGA...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | GGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCACCTCACAGATGGGGATaGTGCATTCTTGATCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GGKALSPSPPSSDLGLRSPHRWG*CILDLS Trigger: AGAAAGATCAAGAATGCACCATCCCCATCTGTGAGG...TGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GTTTCCCAAACGACGAAAGACAGACCAGACAGGACCCTCAGGTTTCTGAGGTGTCAGCCAGGGTCACAGTaGCACAAGCCTGTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSQTTKDRPDRTLRFLRCQPGSQ*HKPVFG Trigger: CCCAAAGACAGGCTTGTGCCACTGTGACCCTGGCTG...ACACCTCAGAAACCTGAGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTGGGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TTCCGACCCAGAGATCGGCGCAGAGGCTTAGGGATAGCACTCTTTACTTTGGGAGGAGGGCAGGAACAGTaGCCAGAAGTAACGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FRPRDRRRGLGIALFTLGGGQEQ*PEVTLH Trigger: ATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCC...TCCCAAAGTAAAGAGTGCTATCCCTAAGCCTCTGCGCCGATCTCTGGGTCGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | CAAACGACGAAAGACAGACCAGACAGGACCCTCAGGTTTCTGAGGTGTCCCTGCAGTACCGTTCCAGCCTaGCTTGCAGGACTCACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QTTKDRPDRTLRFLRCPCSTVPA*LAGLTV Trigger: AACTGTGAGTCCTGCAAGCCAGGCTGGAACGGTACT...GCAGGGACACCTCAGAAACCTGAGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCGCTTTCTTTGCACTGTaGCCCATAGTGGCCAGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHFQAQSPIWSTAASASRAFFAL*PIVARV Trigger: AACCCTGGCCACTATGGGGCACAGTGCAAAGAAAGC...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR GCA 90 bp | AGAATTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACTCCCTGAGCTCTCAATaGCATCTCCCAGACCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RIQNNGGKALSPSPPSSDSLSSQ*HLPDLW Trigger: CCAGAGGTCTGGGAGATGGCATTGAGAGCTCAGGGA...GTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | AGAATTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACGGAGGGCAGGAACAGTaGCCAGAAGTAACGCTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RIQNNGGKALSPSPPSSDGGQEQ*PEVTLH Trigger: ATGCAGCGTTACTTCTGGCCACTGTTCCTGCCCTCC...GTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | TTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGGCTCGATGAAGCTATaGTTGAAGGGGACCTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: FRTMEEKPCRRLLLPLTLGSMKL*LKGTSG Trigger: TCCAGAGGTCCCCTTCAACCATAGCTTCATCGAGCC...CAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | ACCCACAACCAGCTGGCCTCTAACCCTTGCCTCTTTCACGGCAGAGTTTCTGTTTGGAGGTACGTGGAATaGGGAATGGTGTGGAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: THNQLASNPCLFHGRVSVWRYVE*GMVWRH Trigger: ATGCCTCCACACCATTCCCCATTCCACGTACCTCCA...AACAGAAACTCTGCCGTGAAAGAGGCAAGGGTTAGAGGCCAGCTGGTTGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR CCA 90 bp | GGCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGGGGTTGAGCACCTCTaGAGAGTCTCTTGGGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: GIIFRHKAQSGPQQLQHPGVEHL*RVSWVF Trigger: GAAAACCCAAGAGACTCTCCAGAGGTGCTCAACCCC...GGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS-3UTR CCA 90 bp | ACCAGCTGGCCTCTAACCCTTGCCTCTTTCACGGCAGAGTTTCTGTTTAGTCTGGATCCTGAGCTCTCCTaGATGCCTCCATCAGTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TSWPLTLASFTAEFLFSLDPELS*MPPSVV Trigger: GACCACTGATGGAGGCATCCAGGAGAGCTCAGGATC...CAGACTAAACAGAAACTCTGCCGTGAAAGAGGCAAGGGTTAGAGGCCAGCTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS-3UTR CCA 90 bp | TTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTGGCGGCACGGACATaGGCACAACATTCTCATACA | + |
|
Preference number: 4 (lower is better) Translates to: FRTMEEKPCRRLLLPLTLVAART*AQHSHT Trigger: TGTATGAGAATGTTGTGCCCATGTCCGTGCCGCCAC...CAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS-3UTR TCA 90 bp | CTTTACTTTGGGATCCATCTGATCTTTCTGGTAGTTTCCCAAACGACGAAAGACTGTGGCAGTTGCAACTaGAGCTGCAGCGGCGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LYFGIHLIFLVVSQTTKDCGSCN*SCSGGP Trigger: GGGGCCGCCGCTGCAGCTTCAGTTGCAACTGCCACA...GTCTTTCGTCGTTTGGGAAACTACCAGAAAGATCAGATGGATCCCAAAGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGGCATTCAGCTCACAGTaGCCACAGCTTTCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPAFSSQ*PQLSLH Trigger: GTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAATGC...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | GGCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCATTCAGCTCACAGTaGCCACAGCTTTCTTTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: GIIFRHKAQSGPQQLQHPAFSSQ*PQLSLH Trigger: GTGCAAAGAAAGCTGTGGCCACTGTGAGCTGAATGC...GGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | TCTGATCTTTCTGGTAGTTTCCCAAACGACGAAAGACAGACCAGACAGGACCCTGGTGCCTGCAGGACATaGCTGCTTGCACTGAGTACC | + |
|
Preference number: 4 (lower is better) Translates to: SDLSGSFPNDERQTRQDPGACRT*LLALST Trigger: GGTACTCAGTGCAAGCAGCCATGTCCTGCAGGCACC...AGGGTCCTGTCTGGTCTGTCTTTCGTCGTTTGGGAAACTACCAGAAAGATCAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAATTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGTCTTCCGCCTGCTTCTaGGAATCCTGTTCCAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TEFRTMEEKPCRRLLLPLSSACF*ESCSRE Trigger: TTCCCTGGAACAGGATTCCCAGAAGCAGGCGGAAGA...CAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS-3UTR GCA 90 bp | AGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGAAAAGCCCTGGGTTCTCACACCTGTaGCCCAGCCAACCGGGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RWKRIVSGQNSEQWRKSPGFSHL*PSQPGS Trigger: CGACCCCGGTTGGCTGGGGCACAGGTGTGAGAACCC...AGGGCTTTTCCTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | AGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGAAAAGCCCTGCCCCAGTACTGTCCTaGACAGCGGGAGCTGCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RWKRIVSGQNSEQWRKSPAPVLS*TAGAAL Trigger: CAGTGCAGCTCCCGCTGTCCAGGACAGTACTGGGGC...AGGGCTTTTCCTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | AGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGAAAAGCCCTCAGGTTCCAGTGGCCTaGTCACAGCGTGAGGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RWKRIVSGQNSEQWRKSPQVPVA*SQREAG Trigger: CCCAGCCTCACGCTGTGACCAGGCCACTGGAACCTG...AGGGCTTTTCCTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | AGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGAAAAGCCCTTCCGTGGAAGCCAGCTaGGCAGGAACTGTTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RWKRIVSGQNSEQWRKSPSVEAS*AGTVAA Trigger: AGCTGCAACAGTTCCTGCCCAGCTGGCTTCCACGGA...AGGGCTTTTCCTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CCA 90 bp | TGTTTTGAAGAGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGGTCCCAGACACAGGGTaGCAGAGCCCCTCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFEEMEKNSLRTEFRTMEVPDTG*QSPSGH Trigger: ATGCCCAGAGGGGCTCTGCCACCCTGTGTCTGGGAC...CTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCTCTTCAAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | CCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAACAGCGTGAGGCTGGGTaGCACTGGCATGGGCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: PCRRLLLPLTLVSAQAFQQREAG*HWHGRR Trigger: TCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTG...TTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | AGGAGCATCCTCCTCTGTGTTCACTTGCTCTGGGCCTGTAGACTCCTCCGCCTCCAGCGTGAGGCTGGGTaGCACTGGCATGGGCGACGA | + |
|
Preference number: 5 (lower is better) Translates to: RSILLCVHLLWACRLLRLQREAG*HWHGRR Trigger: TCGTCGCCCATGCCAGTGCAACCCAGCCTCACGCTG...GAGGCGGAGGAGTCTACAGGCCCAGAGCAAGTGAACACAGAGGAGGATGCTCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | TGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGGCCTTCCAATCCCCGTTCCAGCCTGGCTaGCAGGACTCACAGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CRRLLLPLTLVSAQAFQSPFQPG*QDSQLP Trigger: CGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGG...GGATTGGAAGGCCTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS TCA 90 bp | TGGGCCATAGGGACCATCTCTGTCCTTGGGGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCAGACGATGCCCATGAGGAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: WAIGTISVLGVQSGS*AAVGTADDAHEEQQ Trigger: CTGCTGCTCCTCATGGGCATCGTCTGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGACCCCAAGGACAGAGATGGTCCCTATGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
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| CDS GCA 90 bp | CTTTCTGCCTCCAGCCGGGACAACACTGGAGCTCAGAGGGGCTGCTaGCTTTACAGACGTGCTGACCAGCAGGGTCTAGCGTGGATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LSASSRDNTGAQRGC*LYRRADQQGLAWIP Trigger: AGGGATCCACGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCCAGTGTTGTCCCGGCTGGAGGCAGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS GCA 90 bp | GATCTTTCTGCCTCCAGCCGGGACAACACTGGAGCTCAGAGGGGCTaGTGCCTTTACAGACGTGCTGACCAGCAGGGTCTAGCGTGGATC | + |
|
Preference number: 5 (lower is better) Translates to: DLSASSRDNTGAQRG*CLYRRADQQGLAWI Trigger: GATCCACGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCCAGTGTTGTCCCGGCTGGAGGCAGAAAGATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS CCA 90 bp | AGGGGCTGCTGCCTTTACAGACGTGCTGACCAGCAGGGTCTAGCGTaGATCCCTGGGTCCCCTGAGTCCAGAGCAGCAACAGTGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: RGCCLYRRADQQGLA*IPGSPESRAATVRT Trigger: TGTTCTCACTGTTGCTGCTCTGGACTCAGGGGACCCAGGGATCCACGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | TTGGTCTCCGCTCAGGCCTTCCAATCCCACCTAGGGCCAGACCCACAACCAGCTATACAGGGGCTCCTCTaGCTCCTTCTCTTCCGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: LVSAQAFQSHLGPDPQPAIQGLL*LLLFRL Trigger: CAGGCGGAAGAGAAGGAGCAAGAGGAGCCCCTGTAT...AGCTGGTTGTGGGTCTGGCCCTAGGTGGGATTGGAAGGCCTGAGCGGAGACCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS CCA 90 bp | GATGGCTGCTGCCTTTACAGACGTGCTGACCAGCAGGGTCTAGCGTaGATCCCTGGGTCCCCTGAGTCCAGAGCAGCAACAGTGAGAACA | + |
|
Preference number: 5 (lower is better) Translates to: DGCCLYRRADQQGLA*IPGSPESRAATVRT Trigger: TGTTCTCACTGTTGCTGCTCTGGACTCAGGGGACCCAGGGATCCACGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123819.2 |
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| CDS-3UTR CAA 90 bp | GAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCCGCTCAGTTGCAGGACTCACAGTaGCCGGTGACTGGAGAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: EEKPCRRLLLPLTLVSAQLQDSQ*PVTGEH Trigger: ATGCTCTCCAGTCACCGGCAACTGTGAGTCCTGCAA...CTGAGCGGAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | ACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCTCTCCCTGCATCCCGGGGATGGTGCATTCTaGATCTTTCTGCCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: TKPNLVHSSFSIPLSLHPGDGAF*IFLPPA Trigger: GGCTGGAGGCAGAAAGATCAAGAATGCACCATCCCC...GGGATGCAGGGAGAGCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCCGTTCCAGCCTGGCTaGCAGGACTCACAGTTGCCG | + |
|
Preference number: 5 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPPFQPG*QDSQLP Trigger: CGGCAACTGTGAGTCCTGCAAGCCAGGCTGGAACGG...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | AACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGACCTTGGTCTCGAGCCCCTCTGGGCATaGGCAGGGCATAGAGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: NNGGKALSPSPPSSDLGLEPLWA*AGHRAV Trigger: AACTGCTCTATGCCCTGCCAATGCCCAGAGGGGCTC...GAGACCAAGGTCAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACAACCAGCTGGCCTCTAACCCTTGCCTCTTTCACGGCAGAGTTTCTGTTCTCTCAGGCCTGTCCTaGGGGTCCAGTCGGGTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: THNQLASNPCLFHGRVSVLSGLS*GSSRVP Trigger: AGGAACCCGACTGGACCCCAAGGACAGGCCTGAGAG...AACAGAAACTCTGCCGTGAAAGAGGCAAGGGTTAGAGGCCAGCTGGTTGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
||
| CDS GCA 90 bp | GTTTACACCGACAGAGGCCCGGCTTCACGCACACCTCTTCTTTCCTaGAGGCATCAGGCCCCTCACAGATGGGGATGGTGCATTCTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYTDRGPASRTPLLS*RHQAPHRWGWCILD Trigger: ATCAAGAATGCACCATCCCCATCTGTGAGGGGCCTGATGCCTGCAGGAAAGAAGAGGTGTGCGTGAAGCCGGGCCTCTGTCGGTGTAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | TGCAAACTTCGTGCCTTCAGCAAAGGAGACGGATGGCCTCTTGGCCCTAGCCAGGGGGATGGTGCATTCTaGATCTTTCTGCCTCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CKLRAFSKGDGWPLGPSQGDGAF*IFLPPA Trigger: GGCTGGAGGCAGAAAGATCAAGAATGCACCATCCCC...CTGGCTAGGGCCAAGAGGCCATCCGTCTCCTTTGCTGAAGGCACGAAGTTTGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | ACAGAATTCAGAACAATGGAGGAAAAGCCCTGTCGCCGTCTCCTCCTTCCTCTGGGCGAGGTGTGGCAGTaGCAACTGAAGCTGCAGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TEFRTMEEKPCRRLLLPLGEVWQ*QLKLQR Trigger: CCGCTGCAGCTTCAGTTGCAACTGCCACACCTCGCC...CAGAGGAAGGAGGAGACGGCGACAGGGCTTTTCCTCCATTGTTCTGAATTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
||
| CDS-3UTR CAA 90 bp | CATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGCGCTACCAGGTGGAAGTaGGCCGTGACTAGTGGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: HHFQAQSPIWSTAASASRATRWK*AVTSGR Trigger: CCTGCCACTAGTCACGGCCAACTTCCACCTGGTAGC...GCGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS-3UTR CAA 90 bp | GCATCATTTTCAGGCACAAAGCCCAATCTGGTCCACAGCAGCTTCAGCATCCCGTTGCAGGACTCACAGTaGCCGGTGACTGGAGAGCAT | + |
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Preference number: 5 (lower is better) Translates to: ASFSGTKPNLVHSSFSIPLQDSQ*PVTGEH Trigger: ATGCTCTCCAGTCACCGGCAACTGTGAGTCCTGCAA...CGGGATGCTGAAGCTGCTGTGGACCAGATTGGGCTTTGTGCCTGAAAATGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | CTTTACTTTGGGATCCATCTGATCTTTCTGGTAGTTTCCCAAACGACGAAAGACGAGCCCCTCTGGGCATaGGCAGGGCATAGAGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: LYFGIHLIFLVVSQTTKDEPLWA*AGHRAV Trigger: AACTGCTCTATGCCCTGCCAATGCCCAGAGGGGCTC...GTCTTTCGTCGTTTGGGAAACTACCAGAAAGATCAGATGGATCCCAAAGTAAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
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| CDS-3UTR CAA 90 bp | TGTTTTGAAGAGATGGAAAAGAATAGTCTCAGGACAGAATTCAGAACAATGGAGTCGATGAAGCTATGGTaGAAGGGGACCTCTGGATCG | + |
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Preference number: 5 (lower is better) Translates to: CFEEMEKNSLRTEFRTMESMKLW*KGTSGS Trigger: CGATCCAGAGGTCCCCTTCAACCATAGCTTCATCGA...CTCCATTGTTCTGAATTCTGTCCTGAGACTATTCTTTTCCATCTCTTCAAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000042808.13 |
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| CDS GCA 72 bp | TCCAGCCGGGACAACACTGGAGCTCAGAGGGGCTGCTaGCTTTACAGACGTGCTGACCAGCAGGGTCTAGCG | + |
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Preference number: 6 (lower is better) Translates to: SSRDNTGAQRGC*LYRRADQQGLA Trigger: CGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCCAGTGTTGTCCCGGCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS GCA 72 bp | GCCTCCAGCCGGGACAACACTGGAGCTCAGAGGGGCTaGTGCCTTTACAGACGTGCTGACCAGCAGGGTCTA | + |
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Preference number: 6 (lower is better) Translates to: ASSRDNTGAQRG*CLYRRADQQGL Trigger: TAGACCCTGCTGGTCAGCACGTCTGTAAAGGCAGCAGCCCCTCTGAGCTCCAGTGTTGTCCCGGCTGGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS TCA 72 bp | GGGACCATCTCTGTCCTTGGGGTCCAGTCGGGTTCCTaGGCAGCAGTAGGCACAGCAGACGATGCCCATGAG | + |
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Preference number: 6 (lower is better) Translates to: GTISVLGVQSGS*AAVGTADDAHE Trigger: CTCATGGGCATCGTCTGCTGTGCCTACTGCTGCTCAGGAACCCGACTGGACCCCAAGGACAGAGATGGTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000118243.2 |
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| CDS CCA 72 bp | TGCCTTTACAGACGTGCTGACCAGCAGGGTCTAGCGTaGATCCCTGGGTCCCCTGAGTCCAGAGCAGCAACA | + |
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Preference number: 6 (lower is better) Translates to: CLYRRADQQGLA*IPGSPESRAAT Trigger: TGTTGCTGCTCTGGACTCAGGGGACCCAGGGATCCACGCTAGACCCTGCTGGTCAGCACGTCTGTAAAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 ENSMUST00000123819.2 |
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| CDS TCA 72 bp | GCATCAGGCCCCTCACAGATGGGGATGGTGCATTCTTaGTCTTTCTGCCTCCAGCCGGGACAACACTGGAGC | + |
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Preference number: 6 (lower is better) Translates to: ASGPSQMGMVHS*SFCLQPGQHWS Trigger: GCTCCAGTGTTGTCCCGGCTGGAGGCAGAAAGATCAAGAATGCACCATCCCCATCTGTGAGGGGCCTGATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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| CDS CAA 72 bp | GGCATCAGGCCCCTCACAGATGGGGATGGTGCATTCTaGATCTTTCTGCCTCCAGCCGGGACAACACTGGAG | + |
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Preference number: 6 (lower is better) Translates to: GIRPLTDGDGAF*IFLPPAGTTLE Trigger: CTCCAGTGTTGTCCCGGCTGGAGGCAGAAAGATCAAGAATGCACCATCCCCATCTGTGAGGGGCCTGATGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000042808.13 ENSMUST00000118243.2 |
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