Pregenerated sensors for SCARB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037936Ensembl transcript IDs: ENSMUST00000086075.13, ENSMUST00000111390.8, ENSMUST00000127148.2, ENSMUST00000137783.3
Found 155 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTaGCATCTGGGGGCTCAGGCCATGGCACTGGTGGGCTGTCCGCTG | + |
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Preference number: 1 (lower is better) Translates to: FAHAWASMCRACGQV*HLGAQAMALVGCPL Trigger: CAGCGGACAGCCCACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR TCA 90 bp | TGTGACATCTGGGGGCTCAGGCCATGGCACTGGTGGGCTGTCCGCTaGGAGAGTCCTCAAGAAGCGGGGTGTAGGGACTGGGTGGCTGGT | + |
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Preference number: 1 (lower is better) Translates to: CDIWGLRPWHWWAVR*ESPQEAGCRDWVAG Trigger: ACCAGCCACCCAGTCCCTACACCCCGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCAGTGCCATGGCCTGAGCCCCCAGATGTCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR GCA 90 bp | AGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTaGACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RLTWQQVCPWSLSCF*TCVGIHVPCVRTGV Trigger: CACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR CCA 90 bp | AGTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTaGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTG | + |
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Preference number: 1 (lower is better) Translates to: SSHSLAHRPFRRAHL*PIRLTWQQVCPWSL Trigger: CAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR CCA 90 bp | CAGCTCCTACAGGAGGGGCTGACAGCAGCTAGAGTTCCCACAGCCTaGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGC | + |
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Preference number: 1 (lower is better) Translates to: QLLQEGLTAARVPTA*LTGHLEEHTCGPSG Trigger: GCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAACTCTAGCTGCTGTCAGCCCCTCCTGTAGGAGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR CCA 90 bp | TCCAGAGTGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTaGCCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: SRVCVQTGQDLELLA*PWHKRPTYAQPLGV Trigger: CACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR CCA 90 bp | GCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTaGAGCTGCTTGCCTGGCCTTGGCACAAGAGGCCGACATATGCCC | + |
|
Preference number: 1 (lower is better) Translates to: APDTAPECVCKLVRT*SCLPGLGTRGRHMP Trigger: GGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR CCA 90 bp | GTGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTaGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGAT | + |
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Preference number: 1 (lower is better) Translates to: VCVQTGQDLELLAWP*HKRPTYAQPLGVTD Trigger: ATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR GCA 90 bp | GCAGAGACGATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTaGAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACA | + |
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Preference number: 1 (lower is better) Translates to: AETIEKAPDTAPECV*KLVRTWSCLPGLGT Trigger: TGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTATCGTCTCTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR CCA 90 bp | CTGGTCCCTGAGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGTGGGGGCTCAGGCCATaGCACTGGTGGGCTGTCCGC | + |
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Preference number: 2 (lower is better) Translates to: LVPELFLHMRGHPCAVRAWGLRP*HWWAVR Trigger: GCGGACAGCCCACCAGTGCCATGGCCTGAGCCCCCA...CGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR-3UTR CCA 90 bp | GACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGAGGCCGACATATGCCCAGCCCGTTTTTGCACATGCGTaGGCATCCATGTGCCGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: DLELLAWPWHKRPTYAQPVFAHA*ASMCRA Trigger: CGCACGGCACATGGATGCCCACGCATGTGCAAAAAC...GGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCGACAGGTGTGACATCTaGGGGCTCAGGCCATGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: HSLAHRPFRRAHLWPIRLDRCDI*GLRPWH Trigger: GTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTC...GAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTGGGCTGTCCGCTaGGAGAGTCCTCAAGAAGCG | + |
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Preference number: 2 (lower is better) Translates to: FRRAHLWPIRLTWQQVCPWWAVR*ESPQEA Trigger: CGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCA...GGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTGACTGGTGGGCTGTCCGCTaGGAGAGTCCTCAAGAAGCG | + |
|
Preference number: 2 (lower is better) Translates to: LFLHMRGHPCAVRADRCDWWAVR*ESPQEA Trigger: CGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCA...GTCACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR-3UTR CCA 90 bp | TGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGAGGCCGACATATGCGTTTTTGCACATGCGTaGGCATCCATGTGCCGTGCG | + |
|
Preference number: 2 (lower is better) Translates to: WSGPGAACLALAQEADICVFAHA*ASMCRA Trigger: CGCACGGCACATGGATGCCCACGCATGTGCAAAAAC...GCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCATCTGTCCCTGGTCCCTaGGTTGTTTTTGCACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: QSVCANWSGPGAACLALASVPGP*VVFAHA Trigger: CGCATGTGCAAAAACAACTCAGGGACCAGGGACAGA...TGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR TCA 90 bp | CACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCTCTGTCCCTGGTCCCTaGGTTGTTTTTGCACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: HSLAHRPFRRAHLWPIRLSVPGP*VVFAHA Trigger: CGCATGTGCAAAAACAACTCAGGGACCAGGGACAGA...GAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR-3UTR CCA 90 bp | AGACGGCCCATACCTCTAGCTTTGACCCCATGCCTGAAAAATAAGGACCCTGAGCTGGAGCTGCTTGCCTaGCCTTGGCACAAGAGGCCG | + |
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Preference number: 2 (lower is better) Translates to: RRPIPLALTPCLKNKDPELELLA*PWHKRP Trigger: CGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAG...CTCAGGGTCCTTATTTTTCAGGCATGGGGTCAAAGCTAGAGGTATGGGCCGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR TCA 90 bp | TGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGATCTGTCCCTGGTCCCTaGGTTGTTTTTGCACATGCG | + |
|
Preference number: 2 (lower is better) Translates to: CVCKLVRTWSCLPGLGTRSVPGP*VVFAHA Trigger: CGCATGTGCAAAAACAACTCAGGGACCAGGGACAGA...TCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR CCA 90 bp | ACGATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGGGGAAGTCAGGAGCCTaGGCAGGGCCAGCTCCTACA | + |
|
Preference number: 2 (lower is better) Translates to: TIEKAPDTAPECVCKLVRGKSGA*AGPAPT Trigger: TGTAGGAGCTGGCCCTGCCCAGGCTCCTGACTTCCC...CCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTATCGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR-3UTR CCA 90 bp | CCGTCCTCTGTGGGAACTAAGGCTTTCAGACTGATGGAGAAAGACAGAAAGACTGACAGGTGTGACATCTaGGGGCTCAGGCCATGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: PSSVGTKAFRLMEKDRKTDRCDI*GLRPWH Trigger: GTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTC...AGTCTTTCTGTCTTTCTCCATCAGTCTGAAAGCCTTAGTTCCCACAGAGGACGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| 3UTR-3UTR TCA 90 bp | ACGATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGCTAAGGCTTTCAGACTaGTGGAGAAAGACAGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: TIEKAPDTAPECVCKLVRLRLSD*WRKTER Trigger: TCTTTCTGTCTTTCTCCATCAGTCTGAAAGCCTTAG...CCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTATCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR TCA 72 bp | TGGGGGCTCAGGCCATGGCACTGGTGGGCTGTCCGCTaGGAGAGTCCTCAAGAAGCGGGGTGTAGGGACTGG | + |
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Preference number: 3 (lower is better) Translates to: WGLRPWHWWAVR*ESPQEAGCRDW Trigger: CCAGTCCCTACACCCCGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCAGTGCCATGGCCTGAGCCCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR GCA 72 bp | TGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTaGACATGCGTGGGCATCCATGTGCCGTGCGTGCGG | + |
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Preference number: 3 (lower is better) Translates to: WQQVCPWSLSCF*TCVGIHVPCVR Trigger: CCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR GCA 72 bp | GCTGCTTGCCTGGCCTTGGCACAAGAGGCCGACATATaGCCAGCCCCTAGGAGTGACAGATCCGTCCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: AACLALAQEADI*PAPRSDRSVLC Trigger: ACAGAGGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR CCA 72 bp | TGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTaGCCTTGGCACAAGAGGCCGACATATGCCCAGCCC | + |
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Preference number: 3 (lower is better) Translates to: CVQTGQDLELLA*PWHKRPTYAQP Trigger: GGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR GCA 72 bp | AGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTaGGTGCGGACAGGTGTGACATCTGGGGGCTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: SCFCTCVGIHVP*VRTGVTSGGSG Trigger: GCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| 3UTR CCA 72 bp | ACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTaGAGCTGCTTGCCTGGCCTTGGCACAAGAGGCCGA | + |
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Preference number: 3 (lower is better) Translates to: TAPECVCKLVRT*SCLPGLGTRGR Trigger: TCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR GCA 72 bp | AGTGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTaGCTGGCCTTGGCACAAGAGGCCGACATATGCCCA | + |
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Preference number: 3 (lower is better) Translates to: SVCANWSGPGAA*LALAQEADICP Trigger: TGGGCATATGTCGGCCTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR CCA 72 bp | AAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTaGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCA | + |
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Preference number: 3 (lower is better) Translates to: KRQIQLQSVCAN*SGPGAACLALA Trigger: TGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| 3UTR TCA 72 bp | TCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTaGGTTGTTTTTGCACATGCGTGGGCATCCATGTGC | + |
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Preference number: 3 (lower is better) Translates to: SGSLGSRSVPGP*VVFAHAWASMC Trigger: GCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR CCA 72 bp | TTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTaGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTT | + |
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Preference number: 3 (lower is better) Translates to: FRRAHLWPIRLT*QQVCPWSLSCF Trigger: AAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| 3UTR TCA 72 bp | CAGATCCGTCCTCTGTGGGAACTAAGGCTTTCAGACTaGTGGAGAAAGACAGAAAGACTTCCTGAGGGAAGT | + |
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Preference number: 3 (lower is better) Translates to: QIRPLWELRLSD*WRKTERLPEGS Trigger: ACTTCCCTCAGGAAGTCTTTCTGTCTTTCTCCATCAGTCTGAAAGCCTTAGTTCCCACAGAGGACGGATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CCA 90 bp | CCGTGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTGGGGAAGCCTTCGTTGGGTaGGTAGACGGACCCGTTGGC | + |
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Preference number: 4 (lower is better) Translates to: PCVRTGVTSGGSGHGTGGEAFVG*VDGPVG Trigger: GCCAACGGGTCCGTCTACCCACCCAACGAAGGCTTC...CCCACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
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| CDS-3UTR GCA 90 bp | CCGTGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTGGGTCCCGAAGGACAGGCTaGTCGGGTCTATGCGGACAT | + |
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Preference number: 4 (lower is better) Translates to: PCVRTGVTSGGSGHGTGGSRRTG*SGLCGH Trigger: ATGTCCGCATAGACCCGAGCAGCCTGTCCTTCGGGA...CCCACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR CCA 90 bp | TGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTGGGCTGTCCTGGCTGCGCAGTTaGCAGATGATGGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: CVRTGVTSGGSGHGTGGLSWLRS*QMMGTS Trigger: GCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGA...CAGCCCACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR TCA 90 bp | GGCACTGGTGGGCTGTCCGCTGAGAGAGTCCTCAAGAAGCGGGGTGTAGGGACTGCCCTTGGCAGCTGGTaGCATCAGGGACTCAGAGTA | + |
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Preference number: 4 (lower is better) Translates to: GTGGLSAERVLKKRGVGTALGSW*HQGLRV Trigger: TACTCTGAGTCCCTGATGTCACCAGCTGCCAAGGGC...AGTCCCTACACCCCGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCAGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGGGCAGAAGCCTTCGTTaGGTGGGTAGACGGACCCGT | + |
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Preference number: 4 (lower is better) Translates to: WPWHKRPTYAQPLGVTDPGRSLR*VGRRTR Trigger: ACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCC...CGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CCA 90 bp | TGGCCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGGCCAGACTCTCGGCATaGGCAGAAGCCTTCGTTGGG | + |
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Preference number: 4 (lower is better) Translates to: WPWHKRPTYAQPLGVTDPARLSA*AEAFVG Trigger: CCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGC...CGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CCA 90 bp | TGGTCCCTGAGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGCCCTGGCTGCGCAGTTaGCAGATGATGGGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: WSLSCFCTCVGIHVPCVRPWLRS*QMMGTS Trigger: GCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGG...CCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS-3UTR TCA 90 bp | GAAGCGGGGTGTAGGGACTGGGTGGCTGGTCTGACCAAGCTATCAGGTTTGGGGAGGATTCGGGTGTCATaGAGGGTGCCCACATCTGCC | + |
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Preference number: 4 (lower is better) Translates to: EAGCRDWVAGLTKLSGLGRIRVS*RVPTSA Trigger: GGCAGATGTGGGCACCCTTCATGACACCCGAATCCT...CCCCAAACCTGATAGCTTGGTCAGACCAGCCACCCAGTCCCTACACCCCGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR TCA 90 bp | TTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCTCTGGTGGGCTGTCCGCTaGGAGAGTCCTCAAGAAGCG | + |
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Preference number: 4 (lower is better) Translates to: LAQEADICPAPRSDRSVLWWAVR*ESPQEA Trigger: CGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCA...GAGGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000111390.8 |
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| CDS-3UTR CCA 90 bp | GTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTGGCAGAAGCCTTCGTTaGGTGGGTAGACGGACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: VAHQAHLAAGLSLVPELFGRSLR*VGRRTR Trigger: ACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCC...AAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS-3UTR CCA 90 bp | GGCACTGGTGGGCTGTCCGCTGAGAGAGTCCTCAAGAAGCGGGGTGTAGGGACTCAGAGTAGGCCTGAATaGCCTCCTTATCCTGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: GTGGLSAERVLKKRGVGTQSRPE*PPYPGS Trigger: GCTCCCAGGATAAGGAGGCCATTCAGGCCTACTCTG...AGTCCCTACACCCCGCTTCTTGAGGACTCTCTCAGCGGACAGCCCACCAGTGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR CCA 90 bp | TTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCGCAGCACCGTGCCCTTaGCAGCTGGTGACATCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FRRAHLWPIRLTWQQVCPAAPCP*QLVTSG Trigger: CCCTGATGTCACCAGCTGCCAAGGGCACGGTGCTGC...GGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS-3UTR CCA 90 bp | TTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTGACCCCTGGCTGCGCAGTTaGCAGATGATGGGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LFLHMRGHPCAVRADRCDPWLRS*QMMGTS Trigger: GCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGG...GTCACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTGCATGCCTCCGGGCTaGAGAATTCCAGCGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: WPWHKRPTYAQPLGVTDPCMPPG*RIPARI Trigger: AATCCTCGCTGGAATTCTTCAGCCCGGAGGCATGCA...CGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | GAAGCGGGGTGTAGGGACTGGGTGGCTGGTCTGACCAAGCTATCAGGTTTGGGGTTCTTGAGCACCTGCTaGTTGATGAGGGAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: EAGCRDWVAGLTKLSGLGFLSTC*LMREGT Trigger: GGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAA...CCCCAAACCTGATAGCTTGGTCAGACCAGCCACCCAGTCCCTACACCCCGCTTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS-3UTR GCA 90 bp | TTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCTCGGGTGTCATGAAGGGTaGCCACATCTGCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LAQEADICPAPRSDRSVLGCHEG*PHLPGS Trigger: ACTTCCGGGCAGATGTGGGCACCCTTCATGACACCC...GAGGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | TGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTGACAGAAGCCTTCGTTGGGTaGGTAGACGGACCCGTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CFCTCVGIHVPCVRTGVTEAFVG*VDGPVG Trigger: GCCAACGGGTCCGTCTACCCACCCAACGAAGGCTTC...TGTCACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCAGGCAGAAGCCTTCGTTaGGTGGGTAGACGGACCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RVPTAWLTGHLEEHTCGPGRSLR*VGRRTR Trigger: ACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCC...TGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAACTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCGCCAGACTCTCGGCATaGGCAGAAGCCTTCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FRRAHLWPIRLTWQQVCPARLSA*AEAFVG Trigger: CCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGC...GGGACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | AGTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCGCCAGACTCTCGGCATaGGCAGAAGCCTTCGTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSHSLAHRPFRRAHLWPIARLSA*AEAFVG Trigger: CCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGC...GATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | GTGCCGTGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTCAAGGAATGCTCCTTTaGGTTAGGGTTCAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VPCVRTGVTSGGSGHGTGQGMLL*VRVQTK Trigger: CTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTG...ACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGGCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000127148.2 |
||
| CDS-3UTR TCA 90 bp | TGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGGATTCGGGTGTCATaGAGGGTGCCCACATCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WLTGHLEEHTCGPSGSLGRIRVS*RVPTSA Trigger: GGCAGATGTGGGCACCCTTCATGACACCCGAATCCT...GCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGAGGGTGTCATGAAGGGTaGCCACATCTGCCCGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CVCKLVRTWSCLPGLGTRGCHEG*PHLPGS Trigger: ACTTCCGGGCAGATGTGGGCACCCTTCATGACACCC...TCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | GGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTCTTCTTGCAGCACCGTaGCCTTGGCAGCTGGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: GHLEEHTCGPSGSLGSRSLLAAP*PWQLVT Trigger: TGTCACCAGCTGCCAAGGGCACGGTGCTGCAAGAAG...AGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| 3UTR CAA 72 bp | GCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTaGTTTTTGCACATGCGTGGGCATCCATGTGCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AHLAAGLSLVPE*FLHMRGHPCAV Trigger: CACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR TCA 90 bp | TCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCAGGTGCTGACATTCTaGATGCCAGACTCTCGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SHSLAHRPFRRAHLWPIRQVLTF*MPDSRH Trigger: ATGCCGAGAGTCTGGCATTCAGAATGTCAGCACCTG...CCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR GCA 90 bp | TCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGTATAGCTTGGCTTCTTaGAGCACCGTGCCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SHSLAHRPFRRAHLWPIRYSLAS*STVPLA Trigger: TGCCAAGGGCACGGTGCTGCAAGAAGCCAAGCTATA...CCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS-3UTR GCA 90 bp | CCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCATTGCTCCGCTCTaGAGAAGAAAGGTCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PFRRAHLWPIRLTWQQVCPIAPL*RRKVGL Trigger: CAGCCCGACCTTTCTTCTGCAGAGCGGAGCAATGGG...ACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | GAGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTTTGTCAGGCTGGAAATaGAGGCTGCGGTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ELFLHMRGHPCAVRADRCLSGWK*RLRFST Trigger: CGTGGAGAACCGCAGCCTCCATTTCCAGCCTGACAA...ACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGGACAGGTGTTTCATAAAAGCACGCTaGCCCATGGTGACCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: ELFLHMRGHPCAVRADRCFIKAR*PMVTSA Trigger: GGCGCTGGTCACCATGGGCCAGCGTGCTTTTATGAA...ACACCTGTCCGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACATGTGCATGCCTCCGGGCTaGAGAATTCCAGCGAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: QAHLAAGLSLVPELFLHMCMPPG*RIPARI Trigger: AATCCTCGCTGGAATTCTTCAGCCCGGAGGCATGCA...CATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACTTCTTGAGCACCTGCTaGTTGATGAGGGAGGGCACC | + |
|
Preference number: 4 (lower is better) Translates to: HQAHLAAGLSLVPELFLHFLSTC*LMREGT Trigger: GGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAA...GTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCTCTGTGGGAACTAAGACATTCTTGAGCACCTaGTGCTTGATGAGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTYAQPLGVTDPSSVGTKTFLST*CLMREG Trigger: GCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAATGT...CTTAGTTCCCACAGAGGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGAGTCAGGCTCACAGGCTTaGTCTCCATCAATATCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VCANWSGPGAACLALAQESGSQA*SPSISS Trigger: GCTCGATATTGATGGAGAGCAAGCCTGTGAGCCTGA...CTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | AGTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCTCACTCTCTGAGCCATaGGACTTGTCAGGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SSHSLAHRPFRRAHLWPISLSEP*DLSGWK Trigger: TTTCCAGCCTGACAAGTCGCATGGCTCAGAGAGTGA...GATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | GTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCATCGATCTTCCCTGTTTaGCCGATGCCCTTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VPTAWLTGHLEEHTCGPSSIFPV*PMPLTD Trigger: ATCTGTCAAGGGCATCGGGCAAACAGGGAAGATCGA...TGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | CTGGTCCCTGAGTTGTTTTTGCACATGCGTGGGCATCCATGTGCCGTGCGTGCGCAAGGAATGCTCCTTTaGGTTAGGGTTCAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: LVPELFLHMRGHPCAVRAQGMLL*VRVQTK Trigger: CTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTG...CGCACGCACGGCACATGGATGCCCACGCATGTGCAAAAACAACTCAGGGACCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | CAGAGTGTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCAATGGCCTCCTTATCCTaGGAGCCCTTTTTACTACCA | + |
|
Preference number: 4 (lower is better) Translates to: QSVCANWSGPGAACLALAMASLS*EPFLLP Trigger: TGGTAGTAAAAAGGGCTCCCAGGATAAGGAGGCCAT...TGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACACACTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS-3UTR GCA 90 bp | GAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTGGACATTCTTGAGCACCTaGTGCTTGATGAGGGAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: EKAPDTAPECVCKLVRTWTFLST*CLMREG Trigger: GCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAATGT...CCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCTCACTCTCTGAGCCATaGGACTTGTCAGGCTGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: HLEEHTCGPSGSLGSRSVSLSEP*DLSGWK Trigger: TTTCCAGCCTGACAAGTCGCATGGCTCAGAGAGTGA...GACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACTCAGGCTCACAGGCTTaGTCTCCATCAATATCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQAHLAAGLSLVPELFLHSGSQA*SPSISS Trigger: GCTCGATATTGATGGAGAGCAAGCCTGTGAGCCTGA...GTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCCAAACAGGCCAAATTTaGCCTTTATGGGAAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: PWHKRPTYAQPLGVTDPSQTGQI*PLWEAC Trigger: ACATGCTTCCCATAAAGGGCAAATTTGGCCTGTTTG...GGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACATGTCGATCTTCCCTGTTTaGCCGATGCCCTTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: QAHLAAGLSLVPELFLHMSIFPV*PMPLTD Trigger: ATCTGTCAAGGGCATCGGGCAAACAGGGAAGATCGA...CATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS-3UTR CCA 90 bp | AAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTGGATTCATAAAAGCACGCTaGCCCATGGTGACCAGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: KKRQIQLQSVCANWSGPGFIKAR*PMVTSA Trigger: GGCGCTGGTCACCATGGGCCAGCGTGCTTTTATGAA...TCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | AGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCAGCGATACGTGGGAATaGCTTCAAACACCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RPFRRAHLWPIRLTWQQVSDTWE*LQTPLI Trigger: AATCAAGGGTGTTTGAAGGCATTCCCACGTATCGCT...GACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | ATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTTGTCAGGCTGGAAATaGAGGCTGCGGTTCTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: IEKAPDTAPECVCKLVRTLSGWK*RLRFST Trigger: CGTGGAGAACCGCAGCCTCCATTTCCAGCCTGACAA...GGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | CCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCCAAATTTGCCCTTTATaGGAAGCATGTCTGGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PIRLTWQQVCPWSLSCFCQICPL*EACLGG Trigger: ACCTCCCAGACATGCTTCCCATAAAGGGCAAATTTG...GCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | AGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACATGCAGCGATACGTGGGAATaGCTTCAAACACCCTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: RLTWQQVCPWSLSCFCTCSDTWE*LQTPLI Trigger: AATCAAGGGTGTTTGAAGGCATTCCCACGTATCGCT...GCATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | CATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCCAAACAGGCCAAATTTaGCCTTTATGGGAAGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HLEEHTCGPSGSLGSRSVQTGQI*PLWEAC Trigger: ACATGCTTCCCATAAAGGGCAAATTTGGCCTGTTTG...GACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | GATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCAAGGAATGCTCCTTTaGGTTAGGGTTCAGACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DRKSARYSSRVCVQTGQDQGMLL*VRVQTK Trigger: CTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTG...GTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR GCA 90 bp | TCCTCTGTGGGAACTAAGGCTTTCAGACTGATGGAGAAAGACAGAAAGACTTCCTCGATCTTCCCTGTTTaGCCGATGCCCTTGACAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SSVGTKAFRLMEKDRKTSSIFPV*PMPLTD Trigger: ATCTGTCAAGGGCATCGGGCAAACAGGGAAGATCGA...GGAAGTCTTTCTGTCTTTCTCCATCAGTCTGAAAGCCTTAGTTCCCACAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CCA 90 bp | CCGTCCTCTGTGGGAACTAAGGCTTTCAGACTGATGGAGAAAGACAGAAAGACTAAAAAGCATTTCTCCTaGCTGCGCAGTTGGCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: PSSVGTKAFRLMEKDRKTKKHFS*LRSWQM Trigger: CATCTGCCAACTGCGCAGCCAGGAGAAATGCTTTTT...AGTCTTTCTGTCTTTCTCCATCAGTCTGAAAGCCTTAGTTCCCACAGAGGACGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS TCA 90 bp | ATGCGGACATTCACAACTCCAGGAAAGCCACCTGTGGCTCCATCCTaGAGACCCGCCAGGACCTGGCAGGTAGCGGCCAGCCCAAGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: MRTFTTPGKPPVAPS*RPARTWQVAASPRG Trigger: CCCTCTTGGGCTGGCCGCTACCTGCCAGGTCCTGGCGGGTCTTCAGGATGGAGCCACAGGTGGCTTTCCTGGAGTTGTGAATGTCCGCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000137783.3 |
||
| CDS GCA 90 bp | CCTGGGGCATCAGCACCAGCTGCGTGTAGAACGTGCTCAGGGGCTTaGCACCCATTGCTCCGCTCTGCAGAAGAAAGGTCGGGCTGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: PGASAPAACRTCSGA*HPLLRSAEERSGCS Trigger: CGAACAGCCCGACCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTGATGCCCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCTGCAGCACCGTGCCCTaGGCAGCTGGTGACATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWHKRPTYAQPLGVTDPSCSTVP*AAGDIR Trigger: CCTGATGTCACCAGCTGCCAAGGGCACGGTGCTGCA...GGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS GCA 90 bp | CAGCACCAGCTGCGTGTAGAACGTGCTCAGGGGCTTGCCACCCATTaGTCCGCTCTGTTCGAACCACAGCAACGGCAGAACTACTGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QHQLRVERAQGLATH*SALFEPQQRQNYWL Trigger: GAGCCAGTAGTTCTGCCGTTGCTGTGGTTCGAACAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS GCA 90 bp | CAGCACCAGCTGCGTGTAGAACGTGCTCAGGGGCTTGCCACCCATTaGTCCGCTCTGCAGAAGAAAGGTCGGGCTGTTCGAACCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QHQLRVERAQGLATH*SALQKKGRAVRTTA Trigger: TGCTGTGGTTCGAACAGCCCGACCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS-3UTR CAA 90 bp | GTGCCGTGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTTGCCCGGAAGTCCCATaGATCATGTTACACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPCVRTGVTSGGSGHGTGCPEVP*IMLHCS Trigger: AGAGCAGTGTAACATGATCAATGGGACTTCCGGGCA...ACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGGCAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS-3UTR CAA 90 bp | GGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTACCCTGGCTGCGCAGTaGGCAGATGATGGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: GHLEEHTCGPSGSLGSRSTLAAQ*ADDGHQ Trigger: CTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGGT...AGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS GCA 90 bp | CGTAGTGAAGAACCTGGGGCATCAGCACCAGCTGCGTGTAGAACGTaGTCAGGGGCTTGCCACCCATTGCTCCGCTCTGCAGAAGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RSEEPGASAPAACRT*SGACHPLLRSAEER Trigger: CCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTGATGCCCCAGGTTCTTCACTACG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS TCA 90 bp | TGGGAGAGAAACAGAGGCGCACCAAACCTGCAGGTGCTGACATTCTaGATGCCAGACTCTCGGCATGGGCAGAAGCCTTCGTTGGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WERNRGAPNLQVLTF*MPDSRHGQKPSLGG Trigger: CCCACCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGCATTCAGAATGTCAGCACCTGCAGGTTTGGTGCGCCTCTGTTTCTCTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS GCA 90 bp | AAGGACAGGCTGCTCGGGTCTATGCGGACATTCTTGAGCACCTGCTaGTTGATGAGGGAGGGCACCATGAGGATCATGACAACGCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KDRLLGSMRTFLSTC*LMREGTMRIMTTPS Trigger: GCTCGGCGTTGTCATGATCCTCATGGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAATGTCCGCATAGACCCGAGCAGCCTGTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS CCA 90 bp | ATTCTGAATGCCAGACTCTCGGCATGGGCAGAAGCCTTCGTTGGGTaGGTAGACGGACCCGTTGGCAAACAGAGTATCGGGGGCCGTGAA | + |
|
Preference number: 5 (lower is better) Translates to: ILNARLSAWAEAFVG*VDGPVGKQSIGGRE Trigger: TTCACGGCCCCCGATACTCTGTTTGCCAACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGCATTCAGAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS TCA 90 bp | ATCGGGGGCCGTGAAGCGATACGTGGGAATGCCTTCAAACACCCTTaGTTCGTTGTAGGTCAGCTTCATGGACCTGCATGCCTCCGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: IGGREAIRGNAFKHP*FVVGQLHGPACLRA Trigger: AGCCCGGAGGCATGCAGGTCCATGAAGCTGACCTACAACGAATCAAGGGTGTTTGAAGGCATTCCCACGTATCGCTTCACGGCCCCCGAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS GCA 90 bp | AGTAGAAAGGGACGGGGATCTCCTTCCACATCCCGAAGGACAGGCTaGTCGGGTCTATGCGGACATTCACAACTCCAGGAAAGCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRKGRGSPSTSRRTG*SGLCGHSQLQESHL Trigger: CAGGTGGCTTTCCTGGAGTTGTGAATGTCCGCATAGACCCGAGCAGCCTGTCCTTCGGGATGTGGAAGGAGATCCCCGTCCCTTTCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137783.3 |
||
| CDS-3UTR CAA 90 bp | CAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACATGTTGAGCACCTGCTGCTaGATGAGGGAGGGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: QAHLAAGLSLVPELFLHMLSTCC*MREGTM Trigger: CATGGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAA...CATGTGCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CAA 90 bp | CATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGTCTTGAGCACCTGCTGCTaGATGAGGGAGGGCACCATG | + |
|
Preference number: 5 (lower is better) Translates to: HLEEHTCGPSGSLGSRSVLSTCC*MREGTM Trigger: CATGGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAA...GACAGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS-3UTR CAA 90 bp | GTGCCGTGCGTGCGGACAGGTGTGACATCTGGGGGCTCAGGCCATGGCACTGGTTCATTGAAGGTGATGTaGACCTTTTGTCTGAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPCVRTGVTSGGSGHGTGSLKVM*TFCLNS Trigger: GGAGTTCAGACAAAAGGTCAACATCACCTTCAATGA...ACCAGTGCCATGGCCTGAGCCCCCAGATGTCACACCTGTCCGCACGCACGGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS TCA 90 bp | TGGGTGGGTAGACGGACCCGTTGGCAAACAGAGTATCGGGGGCCGTaGAGCGATACGTGGGAATGCCTTCAAACACCCTTGATTCGTTGT | + |
|
Preference number: 5 (lower is better) Translates to: WVGRRTRWQTEYRGP*SDTWECLQTPLIRC Trigger: ACAACGAATCAAGGGTGTTTGAAGGCATTCCCACGTATCGCTTCACGGCCCCCGATACTCTGTTTGCCAACGGGTCCGTCTACCCACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS GCA 90 bp | CTCCGGGCTGAAGAATTCCAGCGAGGATTCGGGTGTCATGAAGGGTaGCCACATCTGCCCGGAAGTCCCATTGATCATGTTACACTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: LRAEEFQRGFGCHEG*PHLPGSPIDHVTLL Trigger: GAGCAGTGTAACATGATCAATGGGACTTCCGGGCAGATGTGGGCACCCTTCATGACACCCGAATCCTCGCTGGAATTCTTCAGCCCGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | GAAGCGGGGTGTAGGGACTGGGTGGCTGGTCTGACCAAGCTATCAGGTTTGGGGGGTGATGTTGACCTTTaGTCTGAACTCCCTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EAGCRDWVAGLTKLSGLGGDVDL*SELPVD Trigger: GTCTACAGGGAGTTCAGACAAAAGGTCAACATCACC...CCCCAAACCTGATAGCTTGGTCAGACCAGCCACCCAGTCCCTACACCCCGCTTC 56% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS-3UTR CAA 90 bp | CCTTGGCACAAGAGGCCGACATATGCCCAGCCCCTAGGAGTGACAGATCCGTCCAAGGACACGGTGTCGTaGTCATTGAAGGTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: PWHKRPTYAQPLGVTDPSKDTVS*SLKVML Trigger: CAACATCACCTTCAATGACAACGACACCGTGTCCTT...GGACGGATCTGTCACTCCTAGGGGCTGGGCATATGTCGGCCTCTTGTGCCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | ATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCACCCTGGCTGCGCAGTaGGCAGATGATGGGCACCAG | + |
|
Preference number: 5 (lower is better) Translates to: IEKAPDTAPECVCKLVRTTLAAQ*ADDGHQ Trigger: CTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGGT...GGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000111390.8 |
||
| CDS CCA 90 bp | TCCACGCTCCCGGACTACTGGCTTCTGGCCGTTGAGGACCTCGTTTaGGTTGACCACTTCGAAGAAGTAGACAGACAAGTAGAAAGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: STLPDYWLLAVEDLV*VDHFEEVDRQVERD Trigger: GTCCCTTTCTACTTGTCTGTCTACTTCTTCGAAGTGGTCAACCCAAACGAGGTCCTCAACGGCCAGAAGCCAGTAGTCCGGGAGCGTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000137783.3 |
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| CDS-3UTR CAA 90 bp | GTGTGTGCAAACTGGTCAGGACCTGGAGCTGCTTGCCTGGCCTTGGCACAAGAGACCCCAGAATTCGAGTaGTTCATCCCAACAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: VCANWSGPGAACLALAQETPEFE*FIPTNR Trigger: CCTGTTTGTTGGGATGAACAACTCGAATTCTGGGGT...CTCTTGTGCCAAGGCCAGGCAAGCAGCTCCAGGTCCTGACCAGTTTGCACACAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | CACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACCCCAGAATTCGAGTaGTTCATCCCAACAAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: HSLAHRPFRRAHLWPIRLTPEFE*FIPTNR Trigger: CCTGTTTGTTGGGATGAACAACTCGAATTCTGGGGT...GAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | GTTCCCACAGCCTGGCTCACAGGCCATTTAGAAGAGCACACCTGTGGCCCATCATGCCCGGAAGTCCCATaGATCATGTTACACTGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VPTAWLTGHLEEHTCGPSCPEVP*IMLHCS Trigger: AGAGCAGTGTAACATGATCAATGGGACTTCCGGGCA...TGATGGGCCACAGGTGTGCTCTTCTAAATGGCCTGTGAGCCAGGCTGTGGGAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | GGCCATTTAGAAGAGCACACCTGTGGCCCATCAGGCTCACTTGGCAGCAGGTCTGGTGATGTTGACCTTTaGTCTGAACTCCCTGTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: GHLEEHTCGPSGSLGSRSGDVDL*SELPVD Trigger: GTCTACAGGGAGTTCAGACAAAAGGTCAACATCACC...AGACCTGCTGCCAAGTGAGCCTGATGGGCCACAGGTGTGCTCTTCTAAATGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | CCCATCAGGCTCACTTGGCAGCAGGTCTGTCCCTGGTCCCTGAGTTGTTTTTGCACGGTGTCGTTGTCATaGAAGGTGATGTTGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: PIRLTWQQVCPWSLSCFCTVSLS*KVMLTF Trigger: AAAGGTCAACATCACCTTCAATGACAACGACACCGT...GCAAAAACAACTCAGGGACCAGGGACAGACCTGCTGCCAAGTGAGCCTGATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | CAGACTGATGGAGAAAGACAGAAAGACTTCCTGAGGGAAGTCAGGAGCCTGGGCTCTGGGAGGTACGTGTaGAGAAAATGCACGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QTDGERQKDFLREVRSLGSGRYV*RKCTKG Trigger: TCCCTTCGTGCATTTTCTCAACACGTACCTCCCAGA...GCCCAGGCTCCTGACTTCCCTCAGGAAGTCTTTCTGTCTTTCTCCATCAGTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS TCA 90 bp | CAAGGAATGCTCCTTTGGGTTAGGGTTCAGACCAAGAACAGCTTCTaGCAACACAGGGTCGGCGTTGTAAAAGTGGGGGTGGGAGAGAAA | + |
|
Preference number: 5 (lower is better) Translates to: QGMLLWVRVQTKNSF*QHRVGVVKVGVGEK Trigger: TTTCTCTCCCACCCCCACTTTTACAACGCCGACCCTGTGTTGTCAGAAGCTGTTCTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS GCA 90 bp | AAGAATTCCAGCGAGGATTCGGGTGTCATGAAGGGTGCCCACATCTaGCCGGAAGTCCCATTGATCATGTTACACTGCTCTGAATGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: KNSSEDSGVMKGAHI*PEVPLIMLHCSECQ Trigger: TTGGCATTCAGAGCAGTGTAACATGATCAATGGGACTTCCGGGCAGATGTGGGCACCCTTCATGACACCCGAATCCTCGCTGGAATTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 90 bp | CTGAGTCCGTTCCATTTGTCCACCAGATGGATCCTGCTGAAATTCTaGACGCCCGTGAAGACAGTGAAGACCCCAGAATTCGAGTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LSPFHLSTRWILLKF*TPVKTVKTPEFELF Trigger: GAACAACTCGAATTCTGGGGTCTTCACTGTCTTCACGGGCGTCCAGAATTTCAGCAGGATCCATCTGGTGGACAAATGGAACGGACTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | GAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTGGAAGGACACGGTGTCGTaGTCATTGAAGGTGATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: EKAPDTAPECVCKLVRTWKDTVS*SLKVML Trigger: CAACATCACCTTCAATGACAACGACACCGTGTCCTT...CCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS GCA 90 bp | TTCATGGGGATCCCAGTGACCGGATGGATGTCTAGGAACAAGGAATaGTCCTTTGGGTTAGGGTTCAGACCAAGAACAGCTTCTGACAAC | + |
|
Preference number: 5 (lower is better) Translates to: FMGIPVTGWMSRNKE*SFGLGFRPRTASDN Trigger: GTTGTCAGAAGCTGTTCTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTGTTCCTAGACATCCATCCGGTCACTGGGATCCCCATGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS-3UTR CAA 90 bp | ATAGAAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTCTGGGAGGTACGTGTaGAGAAAATGCACGAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: IEKAPDTAPECVCKLVRTSGRYV*RKCTKG Trigger: TCCCTTCGTGCATTTTCTCAACACGTACCTCCCAGA...GGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTTCTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS TCA 90 bp | TGCCCACATCTGCCCGGAAGTCCCATTGATCATGTTACACTGCTCTaGATGCCAATAATCGATCTTGCTGAGTCCGTTCCATTTGTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: CPHLPGSPIDHVTLL*MPIIDLAESVPFVH Trigger: GTGGACAAATGGAACGGACTCAGCAAGATCGATTATTGGCATTCAGAGCAGTGTAACATGATCAATGGGACTTCCGGGCAGATGTGGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS-3UTR CAA 90 bp | AAAAAGCGCCAGATACAGCTCCAGAGTGTGTGTGCAAACTGGTCAGGACCTGGAACGGTGTCGTTGTCATaGAAGGTGATGTTGACCTTT | + |
|
Preference number: 5 (lower is better) Translates to: KKRQIQLQSVCANWSGPGTVSLS*KVMLTF Trigger: AAAGGTCAACATCACCTTCAATGACAACGACACCGT...TCCAGGTCCTGACCAGTTTGCACACACACTCTGGAGCTGTATCTGGCGCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 72 bp | GCCAGACTCTCGGCATGGGCAGAAGCCTTCGTTGGGTaGGTAGACGGACCCGTTGGCAAACAGAGTATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: ARLSAWAEAFVG*VDGPVGKQSIG Trigger: CCCGATACTCTGTTTGCCAACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS CAA 72 bp | GCTGCGTGTAGAACGTGCTCAGGGGCTTGCCACCCATaGCTCCGCTCTGCAGAAGAAAGGTCGGGCTGTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AACRTCSGACHP*LRSAEERSGCS Trigger: CGAACAGCCCGACCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS GCA 72 bp | TCAGCACCAGCTGCGTGTAGAACGTGCTCAGGGGCTTaGCACCCATTGCTCCGCTCTGCAGAAGAAAGGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SAPAACRTCSGA*HPLLRSAEERS Trigger: CGACCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS CCA 72 bp | GGGCTTATAGTGTCTTCAGGACCCTGGCTGCGCAGTTaGCAGATGATGGGCACCAGCAACAGGAGGCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: GLIVSSGPWLRS*QMMGTSNRRPP Trigger: TGGAGGCCTCCTGTTGCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGGTCCTGAAGACACTATAAGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000111390.8 |
||
| CDS CAA 90 bp | TCAGCACCAGCTGCGTGTAGAACGTGCTCAGGGGCTTGCCACCCATaGCTCCGCTCTGTTCGAACCACAGCAACGGCAGAACTACTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SAPAACRTCSGACHP*LRSVRTTATAELLA Trigger: AGCCAGTAGTTCTGCCGTTGCTGTGGTTCGAACAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTTCTACACGCAGCTGGTGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS GCA 72 bp | AACGTGCTCAGGGGCTTGCCACCCATTGCTCCGCTCTaGAGAAGAAAGGTCGGGCTGTTCGAACCACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: NVLRGLPPIAPL*RRKVGLFEPQQ Trigger: TTGCTGTGGTTCGAACAGCCCGACCTTTCTTCTGCAGAGCGGAGCAATGGGTGGCAAGCCCCTGAGCACGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS GCA 72 bp | GGACGGGGATCTCCTTCCACATCCCGAAGGACAGGCTaGTCGGGTCTATGCGGACATTCACAACTCCAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRGSPSTSRRTG*SGLCGHSQLQE Trigger: TTCCTGGAGTTGTGAATGTCCGCATAGACCCGAGCAGCCTGTCCTTCGGGATGTGGAAGGAGATCCCCGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000137783.3 |
||
| CDS CCA 72 bp | TCACTCTCTGAGCCATGCGACTTGTCAGGCTGGAAATaGAGGCTGCGGTTCTCCACGAAGGACACGGTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: SLSEPCDLSGWK*RLRFSTKDTVS Trigger: CGACACCGTGTCCTTCGTGGAGAACCGCAGCCTCCATTTCCAGCCTGACAAGTCGCATGGCTCAGAGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS CCA 72 bp | GTCGGGCTGTTCGAACCACAGCAACGGCAGAACTACTaGCTCGATCTTCCCTGTTTGCCCGATGCCCTTGAC | + |
|
Preference number: 6 (lower is better) Translates to: VGLFEPQQRQNY*LDLPCLPDALD Trigger: GTCAAGGGCATCGGGCAAACAGGGAAGATCGAGCCAGTAGTTCTGCCGTTGCTGTGGTTCGAACAGCCCGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000127148.2 |
||
| CDS TCA 72 bp | AGACGGACCCGTTGGCAAACAGAGTATCGGGGGCCGTaGAGCGATACGTGGGAATGCCTTCAAACACCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RRTRWQTEYRGP*SDTWECLQTPL Trigger: CAAGGGTGTTTGAAGGCATTCCCACGTATCGCTTCACGGCCCCCGATACTCTGTTTGCCAACGGGTCCGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
||
| CDS TCA 72 bp | AACAGAGGCGCACCAAACCTGCAGGTGCTGACATTCTaGATGCCAGACTCTCGGCATGGGCAGAAGCCTTCG | + |
|
Preference number: 6 (lower is better) Translates to: NRGAPNLQVLTF*MPDSRHGQKPS Trigger: CGAAGGCTTCTGCCCATGCCGAGAGTCTGGCATTCAGAATGTCAGCACCTGCAGGTTTGGTGCGCCTCTGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
||
| CDS TCA 72 bp | ACAAAAAGCATTTCTCCTGGCTGCGCAGTTGGCAGATaGTGGGCACCAGCAACAGGAGGCCTCCAAGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TKSISPGCAVGR*WAPATGGLQAP Trigger: TGGGGCTTGGAGGCCTCCTGTTGCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGAGAAATGCTTTTTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
||
| CDS GCA 72 bp | AGGCTGCTCGGGTCTATGCGGACATTCTTGAGCACCTaGTGCTTGATGAGGGAGGGCACCATGAGGATCATG | + |
|
Preference number: 6 (lower is better) Translates to: RLLGSMRTFLST*CLMREGTMRIM Trigger: CATGATCCTCATGGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAATGTCCGCATAGACCCGAGCAGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS GCA 72 bp | CTGAGCCATGCGACTTGTCAGGCTGGAAATGGAGGCTaGGGTTCTCCACGAAGGACACGGTGTCGTTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: LSHATCQAGNGG*GSPRRTRCRCH Trigger: ATGACAACGACACCGTGTCCTTCGTGGAGAACCGCAGCCTCCATTTCCAGCCTGACAAGTCGCATGGCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 72 bp | GAATGCCAGACTCTCGGCATGGGCAGAAGCCTTCGTTaGGTGGGTAGACGGACCCGTTGGCAAACAGAGTAT | + |
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Preference number: 6 (lower is better) Translates to: ECQTLGMGRSLR*VGRRTRWQTEY Trigger: ATACTCTGTTTGCCAACGGGTCCGTCTACCCACCCAACGAAGGCTTCTGCCCATGCCGAGAGTCTGGCATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS CCA 72 bp | TCCGCTCTGTTCGAACCACAGCAACGGCAGAACTACTaGCTCGATCTTCCCTGTTTGCCCGATGCCCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SALFEPQQRQNY*LDLPCLPDALD Trigger: GTCAAGGGCATCGGGCAAACAGGGAAGATCGAGCCAGTAGTTCTGCCGTTGCTGTGGTTCGAACAGAGCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CAA 72 bp | CTCGGGTCTATGCGGACATTCTTGAGCACCTGCTGCTaGATGAGGGAGGGCACCATGAGGATCATGACAACG | + |
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Preference number: 6 (lower is better) Translates to: LGSMRTFLSTCC*MREGTMRIMTT Trigger: CGTTGTCATGATCCTCATGGTGCCCTCCCTCATCAAGCAGCAGGTGCTCAAGAATGTCCGCATAGACCCGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS GCA 72 bp | AGCGAGGATTCGGGTGTCATGAAGGGTGCCCACATCTaGCCGGAAGTCCCATTGATCATGTTACACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SEDSGVMKGAHI*PEVPLIMLHCS Trigger: AGAGCAGTGTAACATGATCAATGGGACTTCCGGGCAGATGTGGGCACCCTTCATGACACCCGAATCCTCGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 72 bp | CTCCAAAACAAAAAGCATTTCTCCTGGCTGCGCAGTTaGCAGATGATGGGCACCAGCAACAGGAGGCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LQNKKHFSWLRS*QMMGTSNRRPP Trigger: TGGAGGCCTCCTGTTGCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGAGAAATGCTTTTTGTTTTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS CAA 72 bp | ACTCCAAAACAAAAAGCATTTCTCCTGGCTGCGCAGTaGGCAGATGATGGGCACCAGCAACAGGAGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: TPKQKAFLLAAQ*ADDGHQQQEAS Trigger: GGAGGCCTCCTGTTGCTGGTGCCCATCATCTGCCAACTGCGCAGCCAGGAGAAATGCTTTTTGTTTTGGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086075.13 |
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| CDS GCA 72 bp | GAAGAATTCCAGCGAGGATTCGGGTGTCATGAAGGGTaGCCACATCTGCCCGGAAGTCCCATTGATCATGTT | + |
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Preference number: 6 (lower is better) Translates to: EEFQRGFGCHEG*PHLPGSPIDHV Trigger: AACATGATCAATGGGACTTCCGGGCAGATGTGGGCACCCTTCATGACACCCGAATCCTCGCTGGAATTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 72 bp | CCGGACTACTGGCTTCTGGCCGTTGAGGACCTCGTTTaGGTTGACCACTTCGAAGAAGTAGACAGACAAGTA | + |
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Preference number: 6 (lower is better) Translates to: PDYWLLAVEDLV*VDHFEEVDRQV Trigger: TACTTGTCTGTCTACTTCTTCGAAGTGGTCAACCCAAACGAGGTCCTCAACGGCCAGAAGCCAGTAGTCCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000137783.3 |
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| CDS CAA 72 bp | CAGCAACGGCAGAACTACTGGCTCGATCTTCCCTGTTaGCCCGATGCCCTTGACAGATTTGATGTAGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: QQRQNYWLDLPC*PDALDRFDVEA Trigger: AGCCTCTACATCAAATCTGTCAAGGGCATCGGGCAAACAGGGAAGATCGAGCCAGTAGTTCTGCCGTTGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS CAA 90 bp | CACGAAGGACACGGTGTCGTTGTCATTGAAGGTGATGTTGACCTTTaGTCTGAACTCCCTGTAGACATAGGGTCCACGCTCCCGGACTAC | + |
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Preference number: 6 (lower is better) Translates to: HEGHGVVVIEGDVDL*SELPVDIGSTLPDY Trigger: GTAGTCCGGGAGCGTGGACCCTATGTCTACAGGGAGTTCAGACAAAAGGTCAACATCACCTTCAATGACAACGACACCGTGTCCTTCGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CAA 90 bp | TTCGAACCACAGCAACGGCAGAACTACTGGCTCGATCTTCCCTGTTaGCCCGATGCCCTTGACAGATTTGATGTAGAGGCTCAGCTGCAT | + |
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Preference number: 6 (lower is better) Translates to: FEPQQRQNYWLDLPC*PDALDRFDVEAQLH Trigger: ATGCAGCTGAGCCTCTACATCAAATCTGTCAAGGGCATCGGGCAAACAGGGAAGATCGAGCCAGTAGTTCTGCCGTTGCTGTGGTTCGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS TCA 72 bp | CGTGAAGCGATACGTGGGAATGCCTTCAAACACCCTTaGTTCGTTGTAGGTCAGCTTCATGGACCTGCATGC | + |
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Preference number: 6 (lower is better) Translates to: REAIRGNAFKHP*FVVGQLHGPAC Trigger: GCATGCAGGTCCATGAAGCTGACCTACAACGAATCAAGGGTGTTTGAAGGCATTCCCACGTATCGCTTCACG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CCA 72 bp | TCGATCTTGCTGAGTCCGTTCCATTTGTCCACCAGATaGATCCTGCTGAAATTCTGGACGCCCGTGAAGACA | + |
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Preference number: 6 (lower is better) Translates to: SILLSPFHLSTR*ILLKFWTPVKT Trigger: TGTCTTCACGGGCGTCCAGAATTTCAGCAGGATCCATCTGGTGGACAAATGGAACGGACTCAGCAAGATCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CAA 72 bp | CTGCGGTTCTCCACGAAGGACACGGTGTCGTTGTCATaGAAGGTGATGTTGACCTTTTGTCTGAACTCCCTG | + |
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Preference number: 6 (lower is better) Translates to: LRFSTKDTVSLS*KVMLTFCLNSL Trigger: CAGGGAGTTCAGACAAAAGGTCAACATCACCTTCAATGACAACGACACCGTGTCCTTCGTGGAGAACCGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CAA 72 bp | TGGAGGCTGCGGTTCTCCACGAAGGACACGGTGTCGTaGTCATTGAAGGTGATGTTGACCTTTTGTCTGAAC | + |
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Preference number: 6 (lower is better) Translates to: WRLRFSTKDTVS*SLKVMLTFCLN Trigger: GTTCAGACAAAAGGTCAACATCACCTTCAATGACAACGACACCGTGTCCTTCGTGGAGAACCGCAGCCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS TCA 72 bp | GACCAAGATGTTAGGCAGTACAATGTAGTCACTCTCTaGGCCATGCGACTTGTCAGGCTGGAAATGGAGGCT | + |
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Preference number: 6 (lower is better) Translates to: DQDVRQYNVVTL*AMRLVRLEMEA Trigger: AGCCTCCATTTCCAGCCTGACAAGTCGCATGGCTCAGAGAGTGACTACATTGTACTGCCTAACATCTTGGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS GCA 72 bp | ATCCCAGTGACCGGATGGATGTCTAGGAACAAGGAATaGTCCTTTGGGTTAGGGTTCAGACCAAGAACAGCT | + |
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Preference number: 6 (lower is better) Translates to: IPVTGWMSRNKE*SFGLGFRPRTA Trigger: AGCTGTTCTTGGTCTGAACCCTAACCCAAAGGAGCATTCCTTGTTCCTAGACATCCATCCGGTCACTGGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 ENSMUST00000127148.2 |
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| CDS CCA 72 bp | TTCCATTTGTCCACCAGATGGATCCTGCTGAAATTCTaGACGCCCGTGAAGACAGTGAAGACCCCAGAATTC | + |
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Preference number: 6 (lower is better) Translates to: FHLSTRWILLKF*TPVKTVKTPEF Trigger: GAATTCTGGGGTCTTCACTGTCTTCACGGGCGTCCAGAATTTCAGCAGGATCCATCTGGTGGACAAATGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS CAA 72 bp | CACGGTGTCGTTGTCATTGAAGGTGATGTTGACCTTTaGTCTGAACTCCCTGTAGACATAGGGTCCACGCTC | + |
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Preference number: 6 (lower is better) Translates to: HGVVVIEGDVDL*SELPVDIGSTL Trigger: GAGCGTGGACCCTATGTCTACAGGGAGTTCAGACAAAAGGTCAACATCACCTTCAATGACAACGACACCGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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| CDS TCA 72 bp | CTGCCCGGAAGTCCCATTGATCATGTTACACTGCTCTaGATGCCAATAATCGATCTTGCTGAGTCCGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: LPGSPIDHVTLL*MPIIDLAESVP Trigger: TGGAACGGACTCAGCAAGATCGATTATTGGCATTCAGAGCAGTGTAACATGATCAATGGGACTTCCGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086075.13 ENSMUST00000111390.8 |
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