Pregenerated sensors for SCARA5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022032Ensembl transcript IDs: ENSMUST00000022610.15, ENSMUST00000069226.7
Found 251 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR CCA 90 bp | TCTCTTCCCCAGCCTCTGACTGGGGAGCCTCACACCAGCCAGCTTTaGCTTCCACCTCCTCAGTCTCAGAGCGTAACCAGCGCTGTCCAG | + |
Preference number: 1 (lower is better) Translates to: SLPQPLTGEPHTSQL*LPPPQSQSVTSAVQ Trigger: CTGGACAGCGCTGGTTACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCCAGTCAGAGGCTGGGGAAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 90 bp | TGGCAAAGGCACTGGTTGCCAGAACCCAGCCAGGCAAGCTGGCCCTaGACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGTGCTGCGAAC | + |
Preference number: 1 (lower is better) Translates to: WQRHWLPEPSQASWP*TTQLRVLRFSGAAN Trigger: GTTCGCAGCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTGCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 90 bp | AGCCTTTGGCAAAGGCACTGGTTGCCAGAACCCAGCCAGGCAAGCTaGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGTGCT | + |
Preference number: 1 (lower is better) Translates to: SLWQRHWLPEPSQAS*PCTTQLRVLRFSGA Trigger: AGCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTGCCAAAGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 90 bp | GGTCTCAGTCTTGCTCATTCTTGGTCTTCTAACTTGGAAGCCAGATaGACGGGTCAGGTGAGCACTCCCAGGAGGCAGAGTCCTGCCCTG | + |
Preference number: 1 (lower is better) Translates to: GLSLAHSWSSNLEAR*TGQVSTPRRQSPAL Trigger: CAGGGCAGGACTCTGCCTCCTGGGAGTGCTCACCTGACCCGTTCATCTGGCTTCCAAGTTAGAAGACCAAGAATGAGCAAGACTGAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 90 bp | GCAAAGGTTCAGTCAGCCTGGGTCTTCCGTCAGCGTCTAGAGCCATaGGGAAAGAGGAACTCACTAGGAACTCTGGGGAGCCCAACCATA | + |
Preference number: 1 (lower is better) Translates to: AKVQSAWVFRQRLEP*GKRNSLGTLGSPTI Trigger: TATGGTTGGGCTCCCCAGAGTTCCTAGTGAGTTCCTCTTTCCTCATGGCTCTAGACGCTGACGGAAGACCCAGGCTGACTGAACCTTTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 90 bp | AACCTGAGGAATTTGGTAAAGGTTTCAAGCCTTTGGCAAAGGCACTaGTTGCCAGAACCCAGCCAGGCAAGCTGGCCCTGCACCACTCAG | + |
Preference number: 1 (lower is better) Translates to: NLRNLVKVSSLWQRH*LPEPSQASWPCTTQ Trigger: CTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTGCCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 90 bp | GAGTTGCAGGTTAACCTGAGGAATTTGGTAAAGGTTTCAAGCCTTTaGCAAAGGCACTGGTTGCCAGAACCCAGCCAGGCAAGCTGGCCC | + |
Preference number: 1 (lower is better) Translates to: ELQVNLRNLVKVSSL*QRHWLPEPSQASWP Trigger: GGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTGCCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTTAACCTGCAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 90 bp | GAAAGACAGAATGTAGGTCCCACTGAGCACTTTGGAGCAGTTGTCTaGAAAGAGAGTGACATCCGGTCACCTTCGAACCAGAGTAGGGCC | + |
Preference number: 1 (lower is better) Translates to: ERQNVGPTEHFGAVV*KESDIRSPSNQSRA Trigger: GGCCCTACTCTGGTTCGAAGGTGACCGGATGTCACTCTCTTTGCAGACAACTGCTCCAAAGTGCTCAGTGGGACCTACATTCTGTCTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 90 bp | ATGGTAGACTTCCAGTACCATGGTTCTAGAGTTCCTGTGCCCCTTTaGTGCTTTTCTTCACAGCGCGAGAGGCTTACAGTCTGCCAAGCC | + |
Preference number: 1 (lower is better) Translates to: MVDFQYHGSRVPVPL*CFSSQRERLTVCQA Trigger: GGCTTGGCAGACTGTAAGCCTCTCGCGCTGTGAAGAAAAGCATCAAAGGGGCACAGGAACTCTAGAACCATGGTACTGGAAGTCTACCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 90 bp | ACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAACCCCACTaGCAACCAGAGTCAGACCTCAGTTCTGAACTGAGGCAAAGGTTC | + |
Preference number: 1 (lower is better) Translates to: TQFRKLRLWEDNQPH*QPESDLSSELRQRF Trigger: GAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGGTTGGCAGTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 90 bp | TGTGACTCTATTTTAGCCAGACAGGTCTGCACTCAGTTGCTGCCCTaGAGCTCCCCGGTTCTAGAACACATGTACAATCTAGTTCAACCT | + |
Preference number: 1 (lower is better) Translates to: CDSILARQVCTQLLP*SSPVLEHMYNLVQP Trigger: AGGTTGAACTAGATTGTACATGTGTTCTAGAACCGGGGAGCTGCAGGGCAGCAACTGAGTGCAGACCTGTCTGGCTAAAATAGAGTCACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 90 bp | AGAACCCTGAGACACAGTCTAACGACTGATGGACTCAGGTTAATGTaGATAGCTCCCATGTCACCTTTCAAATCAGCCCTCCTGCGTGTA | + |
Preference number: 1 (lower is better) Translates to: RTLRHSLTTDGLRLM*IAPMSPFKSALLRV Trigger: TACACGCAGGAGGGCTGATTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAGACTGTGTCTCAGGGTTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 90 bp | TCTGAATATAGTCTCCTTATGACAGTAAAGAAACCTTCCTTCCCCTaGGAGACAAATCCAGAGCTGATGCCAGTCCCTGGCTGGGTCATC | + |
Preference number: 1 (lower is better) Translates to: SEYSLLMTVKKPSFP*ETNPELMPVPGWVI Trigger: GATGACCCAGCCAGGGACTGGCATCAGCTCTGGATTTGTCTCCCAGGGGAAGGAAGGTTTCTTTACTGTCATAAGGAGACTATATTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 90 bp | CACTGTGTCCATCAGAATTTCCACAGTTTTCTGAAAGATGAGCCATaGGCCTCTCCTCAGAGCCTGGGTCTCAGGGATATAAGTAACACC | + |
Preference number: 1 (lower is better) Translates to: HCVHQNFHSFLKDEP*ASPQSLGLRDISNT Trigger: GGTGTTACTTATATCCCTGAGACCCAGGCTCTGAGGAGAGGCCCATGGCTCATCTTTCAGAAAACTGTGGAAATTCTGATGGACACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 90 bp | GTTATTTCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTaGCATTTTCTTATGTCTCCCATTGGTTTCTCCACTGCTCCTTCC | + |
Preference number: 1 (lower is better) Translates to: VISLHSQLQLGLSGI*HFLMSPIGFSTAPS Trigger: GGAAGGAGCAGTGGAGAAACCAATGGGAGACATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGAAATAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 90 bp | TCCCCGGTTCTAGAACACATGTACAATCTAGTTCAACCTCCTCCCTaGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGTG | + |
Preference number: 1 (lower is better) Translates to: SPVLEHMYNLVQPPP*VKSKLCSLCKQGEV Trigger: CACTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTTGAACTAGATTGTACATGTGTTCTAGAACCGGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 90 bp | AAATTATGTTCTCTTTGTAAGCAGGGGGAAGTGCAACTAAAGGCTTaGGGAGTTCCGAGGCCTCTCATTTCCCATGGGAAGGTTATAGGA | + |
Preference number: 1 (lower is better) Translates to: KLCSLCKQGEVQLKA*GVPRPLISHGKVIG Trigger: TCCTATAACCTTCCCATGGGAAATGAGAGGCCTCGGAACTCCTCAAGCCTTTAGTTGCACTTCCCCCTGCTTACAAAGAGAACATAATTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 90 bp | TCTGTAACCAAGAGACCAAAGGGAATATGGATCCCCAGGCCCTTATaGATCTTCTTCAGAGAGCTCAACAAACTGCTGGTTCAAATGACT | + |
Preference number: 1 (lower is better) Translates to: SVTKRPKGIWIPRPL*IFFRELNKLLVQMT Trigger: AGTCATTTGAACCAGCAGTTTGTTGAGCTCTCTGAAGAAGATTCATAAGGGCCTGGGGATCCATATTCCCTTTGGTCTCTTGGTTACAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 90 bp | GTGCTACGCTTGTACAGGGATACATACATCGGCTCTGGAAGAAAGTaGATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGAT | + |
Preference number: 1 (lower is better) Translates to: VLRLYRDTYIGSGRK*MSTCMLCKHNSWSD Trigger: ATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTATGTATCCCTGTACAAGCGTAGCAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 90 bp | TACGCTTGTACAGGGATACATACATCGGCTCTGGAAGAAAGTGCATaGGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATG | + |
Preference number: 1 (lower is better) Translates to: YACTGIHTSALEESA*AHACYVNITVGQIM Trigger: CATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTATGTATCCCTGTACAAGCGTA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 90 bp | TACAGGGATACATACATCGGCTCTGGAAGAAAGTGCATGAGCACATaGATGTTATGTAAACATAACAGTTGGTCAGATCATGAGAACAGT | + |
Preference number: 1 (lower is better) Translates to: YRDTYIGSGRKCMST*MLCKHNSWSDHENS Trigger: ACTGTTCTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTATGTATCCCTGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | ACCCAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCCCCAGCGCTCAGCTCTaGGCCTCTAACAGTGGGGAA | + |
Preference number: 2 (lower is better) Translates to: TQPGKLALHHSAQGFEVLPSAQL*ASNSGE Trigger: TTCCCCACTGTTAGAGGCCCAGAGCTGAGCGCTGGG...GAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | ACCCAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTCACTCTGCTGGCTGTaGCCTCCTGTTTGGGTTCTC | + |
Preference number: 2 (lower is better) Translates to: TQPGKLALHHSAQGFEVLSLCWL*PPVWVL Trigger: GAGAACCCAAACAGGAGGTCACAGCCAGCAGAGTGA...GAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CCA 90 bp | CCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGTGCCACCTGCCCGTTCCATaGCACAAGGAGACCAATTCT | + |
Preference number: 2 (lower is better) Translates to: PGKLALHHSAQGFEVLWCHLPVP*HKETNS Trigger: AGAATTGGTCTCCTTGTGCCATGGAACGGGCAGGTG...GCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | CCAGAGTCAGACCTCAGTTCTGAACTGAGGCAAAGGTTCAGTCAGCCTGGGTCTAGACAAATCCAGAGCTaGTGCCAGTCCCTGGCTGGG | + |
Preference number: 2 (lower is better) Translates to: PESDLSSELRQRFSQPGSRQIQS*CQSLAG Trigger: CCCAGCCAGGGACTGGCATCAGCTCTGGATTTGTCT...AGACCCAGGCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR GCA 90 bp | GTTCACACTGACTGCAAGCATGGCCCCCAGGAGTTTTCCCTAATACCACACACTGAGAGGCTTACAGTCTaGCAAGCCCCCTCACCTGCC | + |
Preference number: 2 (lower is better) Translates to: VHTDCKHGPQEFSLIPHTERLTV*QAPSPA Trigger: GGCAGGTGAGGGGGCTTGGCAGACTGTAAGCCTCTC...AGTGTGTGGTATTAGGGAAAACTCCTGGGGGCCATGCTTGCAGTCAGTGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CCA 90 bp | ACTAGGCATGGCCAGACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAATCCCCAGCCTCTGACTaGGGAGCCTCACACCAGCCA | + |
Preference number: 2 (lower is better) Translates to: TRHGQTQFRKLRLWEDNQSPASD*GASHQP Trigger: TGGCTGGTGTGAGGCTCCCCAGTCAGAGGCTGGGGA...TTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGTCTGGCCATGCCTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGCAGAGTAGGGCCAACTaGCAGCAAGGGTGGGGTGGT | + |
Preference number: 2 (lower is better) Translates to: SLHSQLQLGLSGICHFLMQSRAN*QQGWGG Trigger: ACCACCCCACCCTTGCTGCCAGTTGGCCCTACTCTG...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | GTTCACACTGACTGCAAGCATGGCCCCCAGGAGTTTTCCCTAATACCACACACTCACACCAGCCAGCTTTaGCTTCCACCTCCTCAGTCT | + |
Preference number: 2 (lower is better) Translates to: VHTDCKHGPQEFSLIPHTHTSQL*LPPPQS Trigger: AGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTG...AGTGTGTGGTATTAGGGAAAACTCCTGGGGGCCATGCTTGCAGTCAGTGTGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | AATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTGGCAGAGTCCTGCCCTaGGGGACATGCCTTGCCTTA | + |
Preference number: 2 (lower is better) Translates to: NDQDQILAEWPVRIFGATGRVLP*GTCLAL Trigger: TAAGGCAAGGCATGTCCCTCAGGGCAGGACTCTGCC...AGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR TCA 90 bp | CCAAGGAACCAGGGAATGACTAAGAAAGCCCCAGTCGTAGTAGGCACTGTGTCCCAGCGTCTAGAGCCATaGGGAAAGAGGAACTCACTA | + |
Preference number: 2 (lower is better) Translates to: PRNQGMTKKAPVVVGTVSQRLEP*GKRNSL Trigger: TAGTGAGTTCCTCTTTCCTCATGGCTCTAGACGCTG...GGACACAGTGCCTACTACGACTGGGGCTTTCTTAGTCATTCCCTGGTTCCTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR GCA 90 bp | AGGCCTCTCATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCGTGGCTCAACAGCAGTaGCCTGGCCTTGGGCTGCGG | + |
Preference number: 2 (lower is better) Translates to: RPLISHGKVIGISYFFLPVAQQQ*PGLGLR Trigger: CCGCAGCCCAAGGCCAGGGCACTGCTGTTGAGCCAC...GGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAATGAGAGGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAACAGGAGGCAGAGTCCTaGCCTGAGGGACATGCCTTG | + |
Preference number: 2 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKQEAES*PEGHAL Trigger: CAAGGCATGTCCCTCAGGGCAGGACTCTGCCTCCTG...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | AAACCTATCCACACTCCCAAATCCCACAACTCCAGATTCAATATGGGTGAACACCAGGCAAGCTGGCCCTaGACCACTCAGCTCAGGGTT | + |
Preference number: 2 (lower is better) Translates to: KPIHTPKSHNSRFNMGEHQASWP*TTQLRV Trigger: AACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTG...GTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTGTGGATAGGTTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | ACTAGGCATGGCCAGACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAAACCTCAGTTCTGAACTaGGGCAAAGGTTCAGTCAGC | + |
Preference number: 2 (lower is better) Translates to: TRHGQTQFRKLRLWEDNQTSVLN*GKGSVS Trigger: GCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGT...TTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGTCTGGCCATGCCTAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAAGCAGCAAGGGTGGGGTaGTGTTGGATCAGGCATGAG | + |
Preference number: 2 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKAARVG*CWIRHE Trigger: CTCATGCCTGATCCAACACCACCCCACCCTTGCTGC...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | GTTCACACTGACTGCAAGCATGGCCCCCAGGAGTTTTCCCTAATACCACACACTGGTTTTGAGGTTCTCTaGTGCTGCGAACTCACACTT | + |
Preference number: 2 (lower is better) Translates to: VHTDCKHGPQEFSLIPHTGFEVL*CCELTL Trigger: AAGTGTGAGTTCGCAGCACCAGAGAACCTCAAAACC...AGTGTGTGGTATTAGGGAAAACTCCTGGGGGCCATGCTTGCAGTCAGTGTGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CAA 90 bp | GATTGTGTCTGTGACTCTATTTTAGCCAGACAGGTCTGCACTCAGTaGCTGCCCTGCAGCTCCCCGGTTCTAGAACACATGTACAATCTA | + |
Preference number: 2 (lower is better) Translates to: DCVCDSILARQVCTQ*LPCSSPVLEHMYNL Trigger: TAGATTGTACATGTGTTCTAGAACCGGGGAGCTGCAGGGCAGCAACTGAGTGCAGACCTGTCTGGCTAAAATAGAGTCACAGACACAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR TCA 90 bp | CATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGGTGCAACTAAAGGCTTaGGGAGTTCCGAGGCCTCTC | + |
Preference number: 2 (lower is better) Translates to: HIASKNDQDQILAEWPVRVQLKA*GVPRPL Trigger: GAGAGGCCTCGGAACTCCTCAAGCCTTTAGTTGCAC...CCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTTTGGAGCAGTTGTCTaGAAAGAGAGTGACATCCGG | + |
Preference number: 2 (lower is better) Translates to: SLHSQLQLGLSGICHFLMFGAVV*KESDIR Trigger: CCGGATGTCACTCTCTTTGCAGACAACTGCTCCAAA...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | ACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAACCCCACTGCCAACCAGTTCTAGAGTTCCTGTaGCCCTTTGATGCTTTTCTT | + |
Preference number: 2 (lower is better) Translates to: TQFRKLRLWEDNQPHCQPVLEFL*PFDAFL Trigger: AAGAAAAGCATCAAAGGGGCACAGGAACTCTAGAAC...TGGTTGGCAGTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | CATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGGAATGTAGGTCCCACTaGGCACTTTGGAGCAGTTGT | + |
Preference number: 2 (lower is better) Translates to: HIASKNDQDQILAEWPVRECRSH*ALWSSC Trigger: ACAACTGCTCCAAAGTGCTCAGTGGGACCTACATTC...CCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | TACATCGGCTCTGGAAGAAAGTGCATGAGCACATGCATGTTATGTAAACATAACACTCAGTTGCTGCCCTaGAGCTCCCCGGTTCTAGAA | + |
Preference number: 2 (lower is better) Translates to: YIGSGRKCMSTCMLCKHNTQLLP*SSPVLE Trigger: TTCTAGAACCGGGGAGCTGCAGGGCAGCAACTGAGT...GTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 90 bp | TGGAAGGAACTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTaGGTAAAGGTTTCAAGCCTTTGGCAAAGGCACTGGTTGCCAGAA | + |
Preference number: 2 (lower is better) Translates to: WKELQAFELQVNLRN*VKVSSLWQRHWLPE Trigger: TTCTGGCAACCAGTGCCTTTGCCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR TCA 90 bp | AAGGAACTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTTGGTAAAGGTTGTTCCTGTGCCCCTTTaGTGCTTTTCTTCACAGCGC | + |
Preference number: 2 (lower is better) Translates to: KELQAFELQVNLRNLVKVVPVPL*CFSSQR Trigger: GCGCTGTGAAGAAAAGCATCAAAGGGGCACAGGAAC...AACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CCA 90 bp | CATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTCTACATCAGGCATGAGCCATaGTTAGGTGGCTCCAAGCAA | + |
Preference number: 2 (lower is better) Translates to: HVLAVGFGTYNLLRRNVYIRHEP*LGGSKQ Trigger: TTGCTTGGAGCCACCTAACCATGGCTCATGCCTGAT...GTAGACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | AAGGAACTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTTGGTAAAGGTTATAAGGTCAAGTGGATaGGCTCTCTTCCCCAGCCTC | + |
Preference number: 2 (lower is better) Translates to: KELQAFELQVNLRNLVKVIRSSG*ALFPSL Trigger: GAGGCTGGGGAAGAGAGCCCATCCACTTGACCTTAT...AACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
||
3UTR-3UTR CCA 90 bp | AAGGAACTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTTGGTAAAGGTTAGGAAGCTGAGGCTGTaGGAAGATAACCAACCCCAC | + |
Preference number: 2 (lower is better) Translates to: KELQAFELQVNLRNLVKVRKLRL*EDNQPH Trigger: GTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCT...AACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
||
3UTR-3UTR CCA 90 bp | CTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTATTCCCAGCTCCAGCTaGGTTTATCAGGTATCTGCC | + |
Preference number: 2 (lower is better) Translates to: LTCACCRIWDIQPSKKECIPSSS*VYQVSA Trigger: GGCAGATACCTGATAAACCCAGCTGGAGCTGGGAAT...ACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 90 bp | TACTATAGTAACACTCCCTGCTGGAAGGAACTTCAGGCATTTGAGTaGCAGGTTAACCTGAGGAATTTGGTAAAGGTTTCAAGCCTTTGG | + |
Preference number: 2 (lower is better) Translates to: YYSNTPCWKELQAFE*QVNLRNLVKVSSLW Trigger: CCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTTCCAGCAGGGAGTGTTACTATAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
||
3UTR-3UTR CCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAAAGTCTTGCTCATTCTTaGTCTTCTAACTTGGAAGCC | + |
Preference number: 2 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKSLAHS*SSNLEA Trigger: GGCTTCCAAGTTAGAAGACCAAGAATGAGCAAGACT...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAACGCTAAGATTCACATaGGAACCTGGTCTCAGTCTT | + |
Preference number: 2 (lower is better) Translates to: HILQARMTKIKYWLSGQSTLRFT*EPGLSL Trigger: AAGACTGAGACCAGGTTCCCATGTGAATCTTAGCGT...TGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 90 bp | TCATACTTCTTTCTACCCTTTAGGGGTTTACCAGGATTGCATTCCTaGGATCACAGGATTCTATTTAGAGAGGCCTGGAAGGTACAATGT | + |
Preference number: 2 (lower is better) Translates to: SYFFLPFRGLPGLHS*DHRILFREAWKVQC Trigger: ACATTGTACCTTCCAGGCCTCTCTAAATAGAATCCTGTGATCCAAGGAATGCAATCCTGGTAAACCCCTAAAGGGTAGAAAGAAGTATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | CAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTATACCTCAGGATTGCATTCCTTaGATCACAGGATTCTATTTA | + |
Preference number: 2 (lower is better) Translates to: QDQILAEWPVRIFGATIPQDCIP*ITGFYL Trigger: TAAATAGAATCCTGTGATCCAAGGAATGCAATCCTG...AGGTATAGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
||
3UTR CAA 90 bp | ATAGGAATTTCATACTTCTTTCTACCCTTTAGGGGTTTACCAGGATaGCATTCCTTGGATCACAGGATTCTATTTAGAGAGGCCTGGAAG | + |
Preference number: 2 (lower is better) Translates to: IGISYFFLPFRGLPG*HSLDHRILFREAWK Trigger: CTTCCAGGCCTCTCTAAATAGAATCCTGTGATCCAAGGAATGCAATCCTGGTAAACCCCTAAAGGGTAGAAAGAAGTATGAAATTCCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGCTGAGGGACATGCCTTaGCTTATTAGCACAGCAATA | + |
Preference number: 2 (lower is better) Translates to: KCMSTCMLCKHNSWSDHELRDMP*LISTAI Trigger: TATTGCTGTGCTAATAAGGCAAGGCATGTCCCTCAG...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGATCTTACATGTGCTTaGTGTAGGATTTGGGACATA | + |
Preference number: 2 (lower is better) Translates to: HILQARMTKIKYWLSGQSDLTCA*CRIWDI Trigger: TATGTCCCAAATCCTACAGCAAGCACATGTAAGATC...TGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | TACATCGGCTCTGGAAGAAAGTGCATGAGCACATGCATGTTATGTAAACATAACGCCTCTCATTTCCCATaGGAAGGTTATAGGAATTTC | + |
Preference number: 2 (lower is better) Translates to: YIGSGRKCMSTCMLCKHNASHFP*EGYRNF Trigger: GAAATTCCTATAACCTTCCCATGGGAAATGAGAGGC...GTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR GCA 90 bp | CTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTGGTTTATCAGGTATCTaGCATTTTCTTATGTCTCCC | + |
Preference number: 2 (lower is better) Translates to: LTCACCRIWDIQPSKKECGLSGI*HFLMSP Trigger: GGGAGACATAAGAAAATGGCAGATACCTGATAAACC...ACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CCA 90 bp | TACATCGGCTCTGGAAGAAAGTGCATGAGCACATGCATGTTATGTAAACATAACTGGGGCAACTATACCTaGATGTACATAGTTTTTCTT | + |
Preference number: 2 (lower is better) Translates to: YIGSGRKCMSTCMLCKHNWGNYT*MYIVFL Trigger: AAGAAAAACTATGTACATCCAGGTATAGTTGCCCCA...GTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | CAGCCTCTGACTGGGGAGCCTCACACCAGCCAGCTTTaGCTTCCACCTCCTCAGTCTCAGAGCGTAACCAGC | + |
Preference number: 3 (lower is better) Translates to: QPLTGEPHTSQL*LPPPQSQSVTS Trigger: GCTGGTTACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCCAGTCAGAGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 72 bp | CACTGGTTGCCAGAACCCAGCCAGGCAAGCTGGCCCTaGACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGT | + |
Preference number: 3 (lower is better) Translates to: HWLPEPSQASWP*TTQLRVLRFSG Trigger: ACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 72 bp | GACATCCGGTCACCTTCGAACCAGAGTAGGGCCAACTaGCAGCAAGGGTGGGGTGGTGTTGGATCAGGCATG | + |
Preference number: 3 (lower is better) Translates to: DIRSPSNQSRAN*QQGWGGVGSGM Trigger: CATGCCTGATCCAACACCACCCCACCCTTGCTGCCAGTTGGCCCTACTCTGGTTCGAAGGTGACCGGATGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | CAAAGGCACTGGTTGCCAGAACCCAGCCAGGCAAGCTaGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTC | + |
Preference number: 3 (lower is better) Translates to: QRHWLPEPSQAS*PCTTQLRVLRF Trigger: GAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 72 bp | TCCCTGGCTGGGTCATCCATAGGCTATAAGGTCAAGTaGATGGGCTCTCTTCCCCAGCCTCTGACTGGGGAG | + |
Preference number: 3 (lower is better) Translates to: SLAGSSIGYKVK*MGSLPQPLTGE Trigger: CTCCCCAGTCAGAGGCTGGGGAAGAGAGCCCATCCACTTGACCTTATAGCCTATGGATGACCCAGCCAGGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 72 bp | TTACAGTCTGCCAAGCCCCCTCACCTGCCCGTTCCATaGCACAAGGAGACCAATTCTGGGGTCTCCGAAAGG | + |
Preference number: 3 (lower is better) Translates to: LQSAKPPHLPVP*HKETNSGVSER Trigger: CCTTTCGGAGACCCCAGAATTGGTCTCCTTGTGCCATGGAACGGGCAGGTGAGGGGGCTTGGCAGACTGTAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | CAGTCAGCCTGGGTCTTCCGTCAGCGTCTAGAGCCATaGGGAAAGAGGAACTCACTAGGAACTCTGGGGAGC | + |
Preference number: 3 (lower is better) Translates to: QSAWVFRQRLEP*GKRNSLGTLGS Trigger: GCTCCCCAGAGTTCCTAGTGAGTTCCTCTTTCCTCATGGCTCTAGACGCTGACGGAAGACCCAGGCTGACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | AGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTaGGGTTCTCTGGTGCTGCGAACTCACACTTCCTAC | + |
Preference number: 3 (lower is better) Translates to: RQAGPAPLSSGF*GSLVLRTHTSY Trigger: GTAGGAAGTGTGAGTTCGCAGCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CCA 72 bp | GCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTaGTGCTGCGAACTCACACTTCCTACTCCGTGGATC | + |
Preference number: 3 (lower is better) Translates to: ALHHSAQGFEVL*CCELTLPTPWI Trigger: GATCCACGGAGTAGGAAGTGTGAGTTCGCAGCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | CCCACTGCCAACCAGAGTCAGACCTCAGTTCTGAACTaGGGCAAAGGTTCAGTCAGCCTGGGTCTTCCGTCA | + |
Preference number: 3 (lower is better) Translates to: PTANQSQTSVLN*GKGSVSLGLPS Trigger: TGACGGAAGACCCAGGCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGGTTGGCAGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | CCAACCCCACTGCCAACCAGAGTCAGACCTCAGTTCTaGACTGAGGCAAAGGTTCAGTCAGCCTGGGTCTTC | + |
Preference number: 3 (lower is better) Translates to: PTPLPTRVRPQF*TEAKVQSAWVF Trigger: GAAGACCCAGGCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGGTTGGCAGTGGGGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | AGAAACCTTCCTTCCCCTGGGAGACAAATCCAGAGCTaGTGCCAGTCCCTGGCTGGGTCATCCATAGGCTAT | + |
Preference number: 3 (lower is better) Translates to: RNLPSPGRQIQS*CQSLAGSSIGY Trigger: ATAGCCTATGGATGACCCAGCCAGGGACTGGCATCAGCTCTGGATTTGTCTCCCAGGGGAAGGAAGGTTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 72 bp | AGGAAGCTGAGGCTGTGGGAAGATAACCAACCCCACTaGCAACCAGAGTCAGACCTCAGTTCTGAACTGAGG | + |
Preference number: 3 (lower is better) Translates to: RKLRLWEDNQPH*QPESDLSSELR Trigger: CCTCAGTTCAGAACTGAGGTCTGACTCTGGTTGGCAGTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | ACCTGCAGGGGTGGAGCTAGGAACAGGGACAGGAAGTaGTCTGAAACCTATCCACACTCCCAAATCCCACAA | + |
Preference number: 3 (lower is better) Translates to: TCRGGARNRDRK*SETYPHSQIPQ Trigger: TTGTGGGATTTGGGAGTGTGGATAGGTTTCAGATCACTTCCTGTCCCTGTTCCTAGCTCCACCCCTGCAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | TCTCTTTGTAAGCAGGGGGAAGTGCAACTAAAGGCTTaGGGAGTTCCGAGGCCTCTCATTTCCCATGGGAAG | + |
Preference number: 3 (lower is better) Translates to: SLCKQGEVQLKA*GVPRPLISHGK Trigger: CTTCCCATGGGAAATGAGAGGCCTCGGAACTCCTCAAGCCTTTAGTTGCACTTCCCCCTGCTTACAAAGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 72 bp | AATGTAGGTCCCACTGAGCACTTTGGAGCAGTTGTCTaGAAAGAGAGTGACATCCGGTCACCTTCGAACCAG | + |
Preference number: 3 (lower is better) Translates to: NVGPTEHFGAVV*KESDIRSPSNQ Trigger: CTGGTTCGAAGGTGACCGGATGTCACTCTCTTTGCAGACAACTGCTCCAAAGTGCTCAGTGGGACCTACATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 72 bp | TTCCAGTACCATGGTTCTAGAGTTCCTGTGCCCCTTTaGTGCTTTTCTTCACAGCGCGAGAGGCTTACAGTC | + |
Preference number: 3 (lower is better) Translates to: FQYHGSRVPVPL*CFSSQRERLTV Trigger: GACTGTAAGCCTCTCGCGCTGTGAAGAAAAGCATCAAAGGGGCACAGGAACTCTAGAACCATGGTACTGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR GCA 72 bp | ATTTTAGCCAGACAGGTCTGCACTCAGTTGCTGCCCTaGAGCTCCCCGGTTCTAGAACACATGTACAATCTA | + |
Preference number: 3 (lower is better) Translates to: ILARQVCTQLLP*SSPVLEHMYNL Trigger: TAGATTGTACATGTGTTCTAGAACCGGGGAGCTGCAGGGCAGCAACTGAGTGCAGACCTGTCTGGCTAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | TCAGGCAGGCCTAACAAGAGCACGCTAAGATTCACATaGGAACCTGGTCTCAGTCTTGCTCATTCTTGGTCT | + |
Preference number: 3 (lower is better) Translates to: SGRPNKSTLRFT*EPGLSLAHSWS Trigger: AGACCAAGAATGAGCAAGACTGAGACCAGGTTCCCATGTGAATCTTAGCGTGCTCTTGTTAGGCCTGCCTGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | GTTAACCTGAGGAATTTGGTAAAGGTTTCAAGCCTTTaGCAAAGGCACTGGTTGCCAGAACCCAGCCAGGCA | + |
Preference number: 3 (lower is better) Translates to: VNLRNLVKVSSL*QRHWLPEPSQA Trigger: TGCCTGGCTGGGTTCTGGCAACCAGTGCCTTTGCCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTTAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CAA 90 bp | CAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTATACCTGTCCCACTGAGCACTTaGGAGCAGTTGTCTGCAAAG | + |
Preference number: 3 (lower is better) Translates to: QDQILAEWPVRIFGATIPVPLST*EQLSAK Trigger: CTTTGCAGACAACTGCTCCAAAGTGCTCAGTGGGAC...AGGTATAGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CAA 90 bp | AATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTCCCCATGTAGAAACCTaGGTGGAAGGGAAAGACAGA | + |
Preference number: 3 (lower is better) Translates to: NDQDQILAEWPVRIFGATPHVET*VEGKDR Trigger: TCTGTCTTTCCCTTCCACCAAGGTTTCTACATGGGG...AGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CAA 90 bp | AACCTCCTCCCTGGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGTTCTTATGTCTCCCATaGGTTTCTCCACTGCTCCTT | + |
Preference number: 3 (lower is better) Translates to: NLLPGSRANYVLFVSRGKFLCLP*VSPLLL Trigger: AAGGAGCAGTGGAGAAACCAATGGGAGACATAAGAA...CTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 72 bp | AATGTCACCAAGAACCCTGAGACACAGTCTAACGACTaGTGGACTCAGGTTAATGTGGATAGCTCCCATGTC | + |
Preference number: 3 (lower is better) Translates to: NVTKNPETQSND*WTQVNVDSSHV Trigger: GACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAGACTGTGTCTCAGGGTTCTTGGTGACATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 72 bp | CTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTaGCATTTTCTTATGTCTCCCATTGGTTTCTCCACT | + |
Preference number: 3 (lower is better) Translates to: LHSQLQLGLSGI*HFLMSPIGFST Trigger: AGTGGAGAAACCAATGGGAGACATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | AGACACAGTCTAACGACTGATGGACTCAGGTTAATGTaGATAGCTCCCATGTCACCTTTCAAATCAGCCCTC | + |
Preference number: 3 (lower is better) Translates to: RHSLTTDGLRLM*IAPMSPFKSAL Trigger: GAGGGCTGATTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAGACTGTGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR TCA 72 bp | CATAACACCTCCCACCTCCATTGCTGCGCTTGCCTATaGCATCATATCATATCAGCATCCATCTGTAACCAA | + |
Preference number: 3 (lower is better) Translates to: HNTSHLHCCACL*HHIISASICNQ Trigger: TTGGTTACAGATGGATGCTGATATGATATGATGTCATAGGCAAGCGCAGCAATGGAGGTGGGAGGTGTTATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | TTCTACCCTTTAGGGGTTTACCAGGATTGCATTCCTTaGATCACAGGATTCTATTTAGAGAGGCCTGGAAGG | + |
Preference number: 3 (lower is better) Translates to: FYPLGVYQDCIP*ITGFYLERPGR Trigger: CCTTCCAGGCCTCTCTAAATAGAATCCTGTGATCCAAGGAATGCAATCCTGGTAAACCCCTAAAGGGTAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | AAAGGCTTGAGGAGTTCCGAGGCCTCTCATTTCCCATaGGAAGGTTATAGGAATTTCATACTTCTTTCTACC | + |
Preference number: 3 (lower is better) Translates to: KGLRSSEASHFP*EGYRNFILLST Trigger: GGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAATGAGAGGCCTCGGAACTCCTCAAGCCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTaGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTA | + |
Preference number: 3 (lower is better) Translates to: HILQARMTKIKY*LSGQSGSLGQL Trigger: TAGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CCA 72 bp | TCCACACTCCCAAATCCCACAACTCCAGATTCAATATaGGTGAACACCAGCAAGAATTTTGTTCTGCAAAGC | + |
Preference number: 3 (lower is better) Translates to: STLPNPTTPDSI*VNTSKNFVLQS Trigger: GCTTTGCAGAACAAAATTCTTGCTGGTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTGTGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR TCA 72 bp | CACTCCCAAATCCCACAACTCCAGATTCAATATGGGTaGACACCAGCAAGAATTTTGTTCTGCAAAGCATGT | + |
Preference number: 3 (lower is better) Translates to: HSQIPQLQIQYG*TPARILFCKAC Trigger: ACATGCTTTGCAGAACAAAATTCTTGCTGGTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR-3UTR CAA 90 bp | AATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTGTGAAACTGTGGGATTaGAGAATTATCTGCAAAGTA | + |
Preference number: 3 (lower is better) Translates to: NDQDQILAEWPVRIFGATVKLWD*RIICKV Trigger: TACTTTGCAGATAATTCTCAAATCCCACAGTTTCAC...AGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 72 bp | CATACTTCTTTCTACCCTTTAGGGGTTTACCAGGATTaGATTCCTTGGATCACAGGATTCTATTTAGAGAGG | + |
Preference number: 3 (lower is better) Translates to: HTSFYPLGVYQD*IPWITGFYLER Trigger: CCTCTCTAAATAGAATCCTGTGATCCAAGGAATGCAATCCTGGTAAACCCCTAAAGGGTAGAAAGAAGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR GCA 72 bp | ACATACATCGGCTCTGGAAGAAAGTGCATGAGCACATaGATGTTATGTAAACATAACAGTTGGTCAGATCAT | + |
Preference number: 3 (lower is better) Translates to: TYIGSGRKCMST*MLCKHNSWSDH Trigger: ATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR-3UTR CAA 90 bp | ATAACAGTTGGTCAGATCATGAGAACAGTAGTGAATAACACATATTGCAAGCAAAACCTGGTCTCAGTCTaGCTCATTCTTGGTCTTCTA | + |
Preference number: 3 (lower is better) Translates to: ITVGQIMRTVVNNTYCKQNLVSV*LILGLL Trigger: TAGAAGACCAAGAATGAGCAAGACTGAGACCAGGTT...TTGCTTGCAATATGTGTTATTCACTACTGTTCTCATGATCTGACCAACTGTTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGGCAGCCCCCACAGCGTaGCCTCCAGCCTCTGCACCA | + |
Preference number: 4 (lower is better) Translates to: ESLHLLGQGPAGVELGTGAAPTA*PPASAP Trigger: TGGTGCAGAGGCTGGAGGGCACGCTGTGGGGGCTGC...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | GGGGAGCCTCACACCAGCCAGCTTTGGCTTCCACCTCCTCAGTCTCAGAGCGTATCAGTCTGTGCCGCCTaGGCGTGCAGCCCCCACAGC | + |
Preference number: 4 (lower is better) Translates to: GEPHTSQLWLPPPQSQSVSVCAA*ACSPHS Trigger: GCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGA...TACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGGGGACCAGGCAGTCCTaGGTCACCTCTCTCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: ESLHLLGQGPAGVELGTGGTRQS*VTSLSW Trigger: CCAGGAGAGAGAGGTGACCCAGGACTGCCTGGTCCC...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | GGGGAGCCTCACACCAGCCAGCTTTGGCTTCCACCTCCTCAGTCTCAGAGCGTAAGCCCCAGGACTGCATaGTTCAGCGCTGAGAGGGAG | + |
Preference number: 4 (lower is better) Translates to: GEPHTSQLWLPPPQSQSVSPRTA*FSAERE Trigger: CTCCCTCTCAGCGCTGAAGCATGCAGTCCTGGGGCT...TACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | CCAGAGTCAGACCTCAGTTCTGAACTGAGGCAAAGGTTCAGTCAGCCTGGGTCTGTGCCCTCCAGCCTCTaGACCAAGCCGGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: PESDLSSELRQRFSQPGSVPSSL*TKPARA Trigger: GGCCCTGGCCGGCTTGGTGCAGAGGCTGGAGGGCAC...AGACCCAGGCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGCATACGGCGAGTGTCTaGGCTGGCATTGCTCACCAG | + |
Preference number: 4 (lower is better) Translates to: ESLHLLGQGPAGVELGTGHTASV*AGIAHQ Trigger: CTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATG...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | CAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGCGCCTTCAAGTCATCTaGGGAGCTTCGAGGCCGGGA | + |
Preference number: 4 (lower is better) Translates to: QPGKLALHHSAQGFEVLWRLQVI*GASRPG Trigger: TCCCGGCCTCGAAGCTCCCCAGATGACTTGAAGGCG...CCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CAA 72 bp | CCAGCCTCTGACTGGGGAGCCTCACACCAGCCAGCTTaGGCTTCCACCTCCTCAGTCTCAGAGCGTAACCAG | + |
Preference number: 4 (lower is better) Translates to: PASDWGASHQPA*ASTSSVSERNQ Trigger: CTGGTTACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCCAGTCAGAGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR TCA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGTTCTGCAGCGCATCCTaGACCTTCCACACCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: ESLHLLGQGPAGVELGTGFCSAS*TFHTCS Trigger: AGAGCAGGTGTGGAAGGTTCAGGATGCGCTGCAGAA...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | CCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGTGCTCTGTCAGGTCTGCCTaGAATGGAGCCTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: PGKLALHHSAQGFEVLWCSVRSA*NGACSS Trigger: GCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGA...GCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | ACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAACCCCACTGCCAACCACGCCTGCTCAGTCTGTaGCGCCTGCGCGTGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: TQFRKLRLWEDNQPHCQPRLLSL*RLRVQP Trigger: GGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCG...TGGTTGGCAGTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | GGGGAGCCTCACACCAGCCAGCTTTGGCTTCCACCTCCTCAGTCTCAGAGCGTAACCTTTGGGTCCCGGTaGCCCTTTGGCAAGGGTGAT | + |
Preference number: 4 (lower is better) Translates to: GEPHTSQLWLPPPQSQSVTFGSR*PFGKGD Trigger: ATCACCCTTGCCAAAGGGCCACCGGGACCCAAAGGT...TACGCTCTGAGACTGAGGAGGTGGAAGCCAAAGCTGGCTGGTGTGAGGCTCCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | ACCCAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTTCCTTGGTCACCTTTaGGTCCCGGTGGCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: TQPGKLALHHSAQGFEVLFLGHL*VPVALW Trigger: CCAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAA...GAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CAA 72 bp | CCATCTCAGCAGGTAGCCCTAGAGTCCCTCCACCTCTaGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACA | + |
Preference number: 4 (lower is better) Translates to: PSQQVALESLHL*GQGPAGVELGT Trigger: TGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTCTAGGGCTACCTGCTGAGATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | TCAGCGTCTAGAGCCATGAGGAAAGAGGAACTCACTAGGAACTCTGGGGAGCCCGCCTGCAATGGAGCCTaGAGCAGCCGCAGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: SASRAMRKEELTRNSGEPACNGA*SSRSCM Trigger: CATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGC...GGGCTCCCCAGAGTTCCTAGTGAGTTCCTCTTTCCTCATGGCTCTAGACGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | AGTAGGGCCAACTGGCAGCAAGGGTGGGGTGGTGTTGGATCAGGCATGAGCCATGTCACCTCTCTCTCCTaGCAGACCTCGAGATCCAGG | + |
Preference number: 4 (lower is better) Translates to: SRANWQQGWGGVGSGMSHVTSLS*QTSRSR Trigger: CCTGGATCTCGAGGTCTGCCAGGAGAGAGAGGTGAC...ATGGCTCATGCCTGATCCAACACCACCCCACCCTTGCTGCCAGTTGGCCCTACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGGCTTGGACAGGCTCCTaGCATCAAAGGGTTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: ESLHLLGQGPAGVELGTGAWTGS*HQRVLQ Trigger: TTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGC...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | AACCTCCTCCCTGGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGGTGCCCTCCAGCCTCTaGACCAAGCCGGCCAGGGCC | + |
Preference number: 4 (lower is better) Translates to: NLLPGSRANYVLFVSRGKVPSSL*TKPARA Trigger: GGCCCTGGCCGGCTTGGTGCAGAGGCTGGAGGGCAC...CTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTTGTGCCGCCTGCGCGTaGAGCCCCCACAGCGTGCCC | + |
Preference number: 4 (lower is better) Translates to: NDQDQILAEWPVRIFGATCAACA*SPHSVP Trigger: GGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACA...AGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTCCGCCTGCTCAGTCTGTaGCGCCTGCGCGTGCAGCCC | + |
Preference number: 4 (lower is better) Translates to: PPFPAPAGFIRYLPFSYVRLLSL*RLRVQP Trigger: GGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCG...GACATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AAACCTATCCACACTCCCAAATCCCACAACTCCAGATTCAATATGGGTGAACACTGTGCCGCCTGCGCGTaGAGCCCCCACAGCGTGCCC | + |
Preference number: 4 (lower is better) Translates to: KPIHTPKSHNSRFNMGEHCAACA*SPHSVP Trigger: GGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACA...GTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTGTGGATAGGTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | GGAACAGGGACAGGAAGTGATCTGAAACCTATCCACACTCCCAAATCCCACAACAGGCCCGCGTGGCGCTaGAGCAGTAGCTGGCTTCGA | + |
Preference number: 4 (lower is better) Translates to: GTGTGSDLKPIHTPKSHNRPAWR*SSSWLR Trigger: TCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCT...GTTGTGGGATTTGGGAGTGTGGATAGGTTTCAGATCACTTCCTGTCCCTGTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | CAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGTTCCCTTCATTTCCTTaGTCACCTTTGGGTCCCGGT | + |
Preference number: 4 (lower is better) Translates to: QPGKLALHHSAQGFEVLWFPSFP*SPLGPG Trigger: ACCGGGACCCAAAGGTGACCAAGGAAATGAAGGGAA...CCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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3UTR CAA 72 bp | CAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTaGAGGTTCTCTGGTGCTGCGAACTCACACTTCCTA | + |
Preference number: 4 (lower is better) Translates to: QASWPCTTQLRV*RFSGAANSHFL Trigger: TAGGAAGTGTGAGTTCGCAGCACCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR TCA 90 bp | GTTCACACTGACTGCAAGCATGGCCCCCAGGAGTTTTCCCTAATACCACACACTTGCATGCTTCAGCGCTaGGAGGGAGCCCAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: VHTDCKHGPQEFSLIPHTCMLQR*EGAQLC Trigger: ACACAGCTGGGCTCCCTCTCAGCGCTGAAGCATGCA...AGTGTGTGGTATTAGGGAAAACTCCTGGGGGCCATGCTTGCAGTCAGTGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | CCAAGGAACCAGGGAATGACTAAGAAAGCCCCAGTCGTAGTAGGCACTGTGTCCGTCACCTCTCTCTCCTaGCAGACCTCGAGATCCAGG | + |
Preference number: 4 (lower is better) Translates to: PRNQGMTKKAPVVVGTVSVTSLS*QTSRSR Trigger: CCTGGATCTCGAGGTCTGCCAGGAGAGAGAGGTGAC...GGACACAGTGCCTACTACGACTGGGGCTTTCTTAGTCATTCCCTGGTTCCTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | CAGAATGTAGGTCCCACTGAGCACTTTGGAGCAGTTGTCTGCAAAGAGAGTGACACCTCCTCAACCCCGTaGAAGCCCAGCATGCGGCAC | + |
Preference number: 4 (lower is better) Translates to: QNVGPTEHFGAVVCKESDTSSTP*KPSMRH Trigger: GTGCCGCATGCTGGGCTTCCACGGGGTTGAGGAGGT...GTCACTCTCTTTGCAGACAACTGCTCCAAAGTGCTCAGTGGGACCTACATTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AACCTCCTCCCTGGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGTGCAGCAGCCGCAGCTaGATGTCCCGGAGGCTCTCA | + |
Preference number: 4 (lower is better) Translates to: NLLPGSRANYVLFVSRGKCSSRS*MSRRLS Trigger: TGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGCA...CTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGGCCTGCAATGGAGCCTaGAGCAGCCGCAGCTGCATG | + |
Preference number: 4 (lower is better) Translates to: SLHSQLQLGLSGICHFLMACNGA*SSRSCM Trigger: CATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGC...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CCAGAGTCAGACCTCAGTTCTGAACTGAGGCAAAGGTTCAGTCAGCCTGGGTCTAGTGTGGCCAGCTCCTaGTTGAGCTGCATCTCCATG | + |
Preference number: 4 (lower is better) Translates to: PESDLSSELRQRFSQPGSSVASS*LSCISM Trigger: CATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACT...AGACCCAGGCTGACTGAACCTTTGCCTCAGTTCAGAACTGAGGTCTGACTCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR TCA 90 bp | AATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTCCTCGGTCACCACGTTaGGTGTGGCCAGCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: NDQDQILAEWPVRIFGATPRSPR*VWPAPA Trigger: AGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGG...AGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAACGTGGAAGCCCAGCATaGGGCACACCACGTCCCCGT | + |
Preference number: 4 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKRGSPA*GTPRPR Trigger: ACGGGGACGTGGTGTGCCGCATGCTGGGCTTCCACG...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | CCAAGGAACCAGGGAATGACTAAGAAAGCCCCAGTCGTAGTAGGCACTGTGTCCCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAA | + |
Preference number: 4 (lower is better) Translates to: PRNQGMTKKAPVVVGTVSHTGSA*TGSCHQ Trigger: TTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTG...GGACACAGTGCCTACTACGACTGGGGCTTTCTTAGTCATTCCCTGGTTCCTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | CCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTCGGCGAGTGTCTGCGCTaGCATTGCTCACCAGCACCT | + |
Preference number: 4 (lower is better) Translates to: PPFPAPAGFIRYLPFSYVGECLR*HCSPAP Trigger: AGGTGCTGGTGAGCAATGCCAGCGCAGACACTCGCC...GACATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | ACGCAATTTAGGAAGCTGAGGCTGTGGGAAGATAACCAACCCCACTGCCAACCAAAGTCCAGGGCTACCTaGCTTTCCCTCCTTCCCTTC | + |
Preference number: 4 (lower is better) Translates to: TQFRKLRLWEDNQPHCQPKSRAT*LSLLPF Trigger: GAAGGGAAGGAGGGAAAGCCAGGTAGCCCTGGACTT...TGGTTGGCAGTGGGGTTGGTTATCTTCCCACAGCCTCAGCTTCCTAAATTGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | AACCTCCTCCCTGGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGCCAGCATCCTCAGCATaGCCACAGTTTGTCACCCCC | + |
Preference number: 4 (lower is better) Translates to: NLLPGSRANYVLFVSRGKPASSA*PQFVTP Trigger: GGGGGTGACAAACTGTGGGCATGCTGAGGATGCTGG...CTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTTCCTTGGTCACCTTTaGGTCCCGGTGGCCCTTTGG | + |
Preference number: 4 (lower is better) Translates to: SLHSQLQLGLSGICHFLMFLGHL*VPVALW Trigger: CCAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAA...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | CATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGCCCCAACGACGATCATaGAACACCTCCACCCGGCCC | + |
Preference number: 4 (lower is better) Translates to: HIASKNDQDQILAEWPVRPQRRS*NTSTRP Trigger: GGGCCGGGTGGAGGTGTTCCATGATCGTCGTTGGGG...CCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAAAGCCCCAGGACTGCATaGTTCAGCGCTGAGAGGGAG | + |
Preference number: 4 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKSPRTA*FSAERE Trigger: CTCCCTCTCAGCGCTGAAGCATGCAGTCCTGGGGCT...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGGCAGCCCCCACAGCGTaGCCTCCAGCCTCTGCACCA | + |
Preference number: 4 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEAAPTA*PPASAP Trigger: TGGTGCAGAGGCTGGAGGGCACGCTGTGGGGGCTGC...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | ATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCTTTAGGGGTTCAGTCTGTGCCGCCTaGGCGTGCAGCCCCCACAGC | + |
Preference number: 4 (lower is better) Translates to: ISHGKVIGISYFFLPFRGSVCAA*ACSPHS Trigger: GCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGA...ACCCCTAAAGGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | TTCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATCATACGGCGAGTGTCTaGGCTGGCATTGCTCACCAG | + |
Preference number: 4 (lower is better) Translates to: FPPFPAPAGFIRYLPFSYHTASV*AGIAHQ Trigger: CTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATG...ATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAACGCCTTCAAGTCATCTaGGGAGCTTCGAGGCCGGGA | + |
Preference number: 4 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKRLQVI*GASRPG Trigger: TCCCGGCCTCGAAGCTCCCCAGATGACTTGAAGGCG...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGCACCCGGCCCTGGTGTaGGCCGGAGCCATTCACCAG | + |
Preference number: 4 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEHPALV*AGAIHQ Trigger: CTGGTGAATGGCTCCGGCCCACACCAGGGCCGGGTG...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR TCA 90 bp | CATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGTCTCATTCAGCCGGTTaGCGTTCCGAGTCAGCGCCT | + |
Preference number: 4 (lower is better) Translates to: HIASKNDQDQILAEWPVRSHSAG*RSESAP Trigger: AGGCGCTGACTCGGAACGTCAACCGGCTGAATGAGA...CCTGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR TCA 90 bp | TGTATGAGCTCTGGGCTCCAGTCTGAATATAGTCTCCTTATGACAGTAAAGAAACCTCGGTCACCACGTTaGGTGTGGCCAGCTCCTGCT | + |
Preference number: 4 (lower is better) Translates to: CMSSGLQSEYSLLMTVKKPRSPR*VWPAPA Trigger: AGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGG...TTTCTTTACTGTCATAAGGAGACTATATTCAGACTGGAGCCCAGAGCTCATACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | CTAACGACTGATGGACTCAGGTTAATGTGGATAGCTCCCATGTCACCTTTCAAATCTGTCAGGTCTGCCTaGAATGGAGCCTGCAGCAGC | + |
Preference number: 4 (lower is better) Translates to: LTTDGLRLMWIAPMSPFKSVRSA*NGACSS Trigger: GCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGA...TTTGAAAGGTGACATGGGAGCTATCCACATTAACCTGAGTCCATCAGTCGTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTCGTAGCTGGCTTCGATTaGTTTCCACCTGCAGCTGGT | + |
Preference number: 4 (lower is better) Translates to: PPFPAPAGFIRYLPFSYVVAGFD*FPPAAG Trigger: ACCAGCTGCAGGTGGAAAGCAATCGAAGCCAGCTAC...GACATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCAGGTCCTGTAGCCACGTaGTGTGCAGGGCCACGTCAT | + |
Preference number: 4 (lower is better) Translates to: HILQARMTKIKYWLSGQSGPVAT*CAGPRH Trigger: ATGACGTGGCCCTGCACAGCACGTGGCTACAGGACC...TGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AAACCTATCCACACTCCCAAATCCCACAACTCCAGATTCAATATGGGTGAACACTGTCTGCGCTGGCATTaGTCACCAGCACCTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: KPIHTPKSHNSRFNMGEHCLRWH*SPAPAG Trigger: ACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACA...GTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTGTGGATAGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAA | + |
Preference number: 4 (lower is better) Translates to: SLHSQLQLGLSGICHFLMHTGSA*TGSCHQ Trigger: TTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTG...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | GGAACAGGGACAGGAAGTGATCTGAAACCTATCCACACTCCCAAATCCCACAACTGTTCCTCAAGGCGATaGAGTGTTCCCAGTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: GTGTGSDLKPIHTPKSHNCSSRR*SVPSPS Trigger: TGAAGGACTGGGAACACTCCATCGCCTTGAGGAACA...GTTGTGGGATTTGGGAGTGTGGATAGGTTTCAGATCACTTCCTGTCCCTGTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | TTAGCCTATCTTTTAAAATGTAACCATTATGACGTGCTGAGCAATGGGCAATGTAGGCCCGCGTGGCGCTaGAGCAGTAGCTGGCTTCGA | + |
Preference number: 4 (lower is better) Translates to: LAYLLKCNHYDVLSNGQCRPAWR*SSSWLR Trigger: TCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCT...ACATTGCCCATTGCTCAGCACGTCATAATGGTTACATTTTAAAAGATAGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | TGTATGAGCTCTGGGCTCCAGTCTGAATATAGTCTCCTTATGACAGTAAAGAAAGGTCCTGTAGCCACGTaGTGTGCAGGGCCACGTCAT | + |
Preference number: 4 (lower is better) Translates to: CMSSGLQSEYSLLMTVKKGPVAT*CAGPRH Trigger: ATGACGTGGCCCTGCACAGCACGTGGCTACAGGACC...TTTCTTTACTGTCATAAGGAGACTATATTCAGACTGGAGCCCAGAGCTCATACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCATGTCTGCGCTGGCATTaGTCACCAGCACCTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: HILQARMTKIKYWLSGQSCLRWH*SPAPAG Trigger: ACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACA...TGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | TCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATGTGTTCCTCAAGGCGATaGAGTGTTCCCAGTCCTTCA | + |
Preference number: 4 (lower is better) Translates to: SLHSQLQLGLSGICHFLMCSSRR*SVPSPS Trigger: TGAAGGACTGGGAACACTCCATCGCCTTGAGGAACA...CATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGGGGACCAGGCAGTCCTaGGTCACCTCTCTCTCCTGG | + |
Preference number: 4 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEGTRQS*VTSLSW Trigger: CCAGGAGAGAGAGGTGACCCAGGACTGCCTGGTCCC...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR TCA 90 bp | GGAACAGGGACAGGAAGTGATCTGAAACCTATCCACACTCCCAAATCCCACAACGGGACACTGCTAAGATaGAGATACCCACAAGAATCA | + |
Preference number: 4 (lower is better) Translates to: GTGTGSDLKPIHTPKSHNGTLLR*RYPQES Trigger: TGATTCTTGTGGGTATCTTCATCTTAGCAGTGTCCC...GTTGTGGGATTTGGGAGTGTGGATAGGTTTCAGATCACTTCCTGTCCCTGTTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | AAACCTATCCACACTCCCAAATCCCACAACTCCAGATTCAATATGGGTGAACACGTAGCTGGCTTCGATTaGTTTCCACCTGCAGCTGGT | + |
Preference number: 4 (lower is better) Translates to: KPIHTPKSHNSRFNMGEHVAGFD*FPPAAG Trigger: ACCAGCTGCAGGTGGAAAGCAATCGAAGCCAGCTAC...GTGTTCACCCATATTGAATCTGGAGTTGTGGGATTTGGGAGTGTGGATAGGTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR GCA 90 bp | CTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTTTGCTCACCAGCACCTaGAGGTCCTGTAGCCACGTG | + |
Preference number: 4 (lower is better) Translates to: LTCACCRIWDIQPSKKECLLTST*RSCSHV Trigger: CACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAA...ACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | AAGGAACTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTTGGTAAAGGTTTTGCTCACCAGCACCTaGAGGTCCTGTAGCCACGTG | + |
Preference number: 4 (lower is better) Translates to: KELQAFELQVNLRNLVKVLLTST*RSCSHV Trigger: CACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAA...AACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR TCA 90 bp | TTAGCCTATCTTTTAAAATGTAACCATTATGACGTGCTGAGCAATGGGCAATGTTGCATGCTTCAGCGCTaGGAGGGAGCCCAGCTGTGT | + |
Preference number: 4 (lower is better) Translates to: LAYLLKCNHYDVLSNGQCCMLQR*EGAQLC Trigger: ACACAGCTGGGCTCCCTCTCAGCGCTGAAGCATGCA...ACATTGCCCATTGCTCAGCACGTCATAATGGTTACATTTTAAAAGATAGGCTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR TCA 90 bp | TACATCGGCTCTGGAAGAAAGTGCATGAGCACATGCATGTTATGTAAACATAACTTCTGCAGCGCATCCTaGACCTTCCACACCTGCTCT | + |
Preference number: 4 (lower is better) Translates to: YIGSGRKCMSTCMLCKHNFCSAS*TFHTCS Trigger: AGAGCAGGTGTGGAAGGTTCAGGATGCGCTGCAGAA...GTTATGTTTACATAACATGCATGTGCTCATGCACTTTCTTCCAGAGCCGATGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | GCGCTTGCCTATGACATCATATCATATCAGCATCCATCTGTAACCAAGAGACCAGCTTGGACAGGCTCCTaGCATCAAAGGGTTCTTCAA | + |
Preference number: 4 (lower is better) Translates to: ALAYDIISYQHPSVTKRPAWTGS*HQRVLQ Trigger: TTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGC...TGGTCTCTTGGTTACAGATGGATGCTGATATGATATGATGTCATAGGCAAGCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | CTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTAGTGTGGCCAGCTCCTaGTTGAGCTGCATCTCCATG | + |
Preference number: 4 (lower is better) Translates to: LTCACCRIWDIQPSKKECSVASS*LSCISM Trigger: CATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACT...ACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | ATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCTTTAGGGGTACCTTTGGGTCCCGGTaGCCCTTTGGCAAGGGTGAT | + |
Preference number: 4 (lower is better) Translates to: ISHGKVIGISYFFLPFRGTFGSR*PFGKGD Trigger: ATCACCCTTGCCAAAGGGCCACCGGGACCCAAAGGT...ACCCCTAAAGGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 72 bp | GGAAAAGAGGGAAACAGAGTCATTAAGGGTTTCTACTaGCTGGGGAGGTGGATGGTGAAACTGTGGGATTTG | + |
Preference number: 4 (lower is better) Translates to: GKEGNRVIKGFY*LGRWMVKLWDL Trigger: CAAATCCCACAGTTTCACCATCCACCTCCCCAGCAAGTAGAAACCCTTAATGACTCTGTTTCCCTCTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR GCA 90 bp | ATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCTTTAGGGGTCGTCGTCACACACTGTaGCCCAACGACGATCATGGA | + |
Preference number: 4 (lower is better) Translates to: ISHGKVIGISYFFLPFRGRRHTL*PNDDHG Trigger: TCCATGATCGTCGTTGGGGCACAGTGTGTGACGACG...ACCCCTAAAGGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | AGGCCTCTCATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCTTCCCTTCATTTCCTTaGTCACCTTTGGGTCCCGGT | + |
Preference number: 4 (lower is better) Translates to: RPLISHGKVIGISYFFLPFPSFP*SPLGPG Trigger: ACCGGGACCCAAAGGTGACCAAGGAAATGAAGGGAA...GGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAATGAGAGGCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | TTATGTCTGATCTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAAGTCCAGGGCTACCTaGCTTTCCCTCCTTCCCTTC | + |
Preference number: 4 (lower is better) Translates to: LCLILHVLAVGFGTYNLLKSRAT*LSLLPF Trigger: GAAGGGAAGGAGGGAAAGCCAGGTAGCCCTGGACTT...TAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAGATCAGACATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CCA 90 bp | CACATATTGCAAGCAAGAATGACCAAGATCAAATATTGGCTGAGTGGCCAGTCATTGGAGAACTGGCAGTaGAAGATGGAGCTCTCGGTT | + |
Preference number: 4 (lower is better) Translates to: HILQARMTKIKYWLSGQSLENWQ*KMELSV Trigger: AACCGAGAGCTCCATCTTCCACTGCCAGTTCTCCAA...TGACTGGCCACTCAGCCAATATTTGATCTTGGTCATTCTTGCTTGCAATATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 72 bp | CTTCAGGCATTTGAGTTGCAGGTTAACCTGAGGAATTaGGTAAAGGTTTCAAGCCTTTGGCAAAGGCACTGG | + |
Preference number: 4 (lower is better) Translates to: LQAFELQVNLRN*VKVSSLWQRHW Trigger: CCAGTGCCTTTGCCAAAGGCTTGAAACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CCA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGCCCCATTTGGAGAACTaGCAGTGGAAGATGGAGCTC | + |
Preference number: 4 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEPHLEN*QWKMEL Trigger: GAGCTCCATCTTCCACTGCCAGTTCTCCAAATGGGG...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 72 bp | AACACTCCCTGCTGGAAGGAACTTCAGGCATTTGAGTaGCAGGTTAACCTGAGGAATTTGGTAAAGGTTTCA | + |
Preference number: 4 (lower is better) Translates to: NTPCWKELQAFE*QVNLRNLVKVS Trigger: TGAAACCTTTACCAAATTCCTCAGGTTAACCTGCAACTCAAATGCCTGAAGTTCCTTCCAGCAGGGAGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR TCA 90 bp | CTTACATGTGCTTGCTGTAGGATTTGGGACATACAACCTTCTAAGAAGGAATGTGGGACACTGCTAAGATaGAGATACCCACAAGAATCA | + |
Preference number: 4 (lower is better) Translates to: LTCACCRIWDIQPSKKECGTLLR*RYPQES Trigger: TGATTCTTGTGGGTATCTTCATCTTAGCAGTGTCCC...ACATTCCTTCTTAGAAGGTTGTATGTCCCAAATCCTACAGCAAGCACATGTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR TCA 90 bp | TTAGCCTATCTTTTAAAATGTAACCATTATGACGTGCTGAGCAATGGGCAATGTCCAGGCGAATCATTGTaGAATCCATGTCACCAGCTC | + |
Preference number: 4 (lower is better) Translates to: LAYLLKCNHYDVLSNGQCPGESL*NPCHQL Trigger: GAGCTGGTGACATGGATTTCACAATGATTCGCCTGG...ACATTGCCCATTGCTCAGCACGTCATAATGGTTACATTTTAAAAGATAGGCTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 72 bp | CTTGTGTTTCCTCCATGTAAAGACCAAGTGAGAAAGTaGCTGAGTCTTCATCACTGGGGTAACTGGATTTTT | + |
Preference number: 4 (lower is better) Translates to: LVFPPCKDQVRK*LSLHHWGNWIF Trigger: AAAAATCCAGTTACCCCAGTGATGAAGACTCAGCAACTTTCTCACTTGGTCTTTACATGGAGGAAACACAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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3UTR CAA 72 bp | TCATACTTCTTTCTACCCTTTAGGGGTTTACCAGGATaGCATTCCTTGGATCACAGGATTCTATTTAGAGAG | + |
Preference number: 4 (lower is better) Translates to: SYFFLPFRGLPG*HSLDHRILFRE Trigger: CTCTCTAAATAGAATCCTGTGATCCAAGGAATGCAATCCTGGTAAACCCCTAAAGGGTAGAAAGAAGTATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 90 bp | CTGTCCTGTTCGGTCCCGCAGCAGGGCCATCGCCTGCTCAGTCTGTaGCGCCTGCGCGTGCAGCCCCCACAGCGTGCCCTCCAGCCTCTG | + |
Preference number: 5 (lower is better) Translates to: LSCSVPQQGHRLLSL*RLRVQPPQRALQPL Trigger: CAGAGGCTGGAGGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCGATGGCCCTGCTGCGGGACCGAACAGGACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | TCGCCTGCTCAGTCTGTGCCGCCTGCGCGTGCAGCCCCCACAGCGTaGCCTCCAGCCTCTGCACCAAGCCGGCCAGGGCCAACAACGAGT | + |
Preference number: 5 (lower is better) Translates to: SPAQSVPPARAAPTA*PPASAPSRPGPTTS Trigger: ACTCGTTGTTGGCCCTGGCCGGCTTGGTGCAGAGGCTGGAGGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | GAGTCACTCTGCTGTCCTGTTCGGTCCCGCAGCAGGGCCATCGCCTaGTCAGTCTGTGCCGCCTGCGCGTGCAGCCCCCACAGCGTGCCC | + |
Preference number: 5 (lower is better) Translates to: ESLCCPVRSRSRAIA*SVCAACACSPHSVP Trigger: GGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCGATGGCCCTGCTGCGGGACCGAACAGGACAGCAGAGTGACTC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 90 bp | CCCAGGACCCCCACCCTGCGTGCTAGCCCATCCAGCAGGCCCGCGTaGCGCTGCAGCAGTAGCTGGCTTCGATTGCTTTCCACCTGCAGC | + |
Preference number: 5 (lower is better) Translates to: PRTPTLRASPSSRPA*RCSSSWLRLLSTCS Trigger: GCTGCAGGTGGAAAGCAATCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCTGCTGGATGGGCTAGCACGCAGGGTGGGGGTCCTGGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 90 bp | GTAGCCACGTGCTGTGCAGGGCCACGTCATAGGACAGGCTGTGGTTaGGACCACGGAGCGCACCGCCCACGTCAGCCAGCTCCTCCCCCA | + |
Preference number: 5 (lower is better) Translates to: VATCCAGPRHRTGCG*DHGAHRPRQPAPPP Trigger: TGGGGGAGGAGCTGGCTGACGTGGGCGGTGCGCTCCGTGGTCTCAACCACAGCCTGTCCTATGACGTGGCCCTGCACAGCACGTGGCTAC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 90 bp | CAGGAAGACCAGAAGATACAGCCCCAGGACTGCATGCTTCAGCGCTaGGAGGGAGCCCAGCTGTGTACAGCAGCCTCCCGCCCGCCGTTT | + |
Preference number: 5 (lower is better) Translates to: QEDQKIQPQDCMLQR*EGAQLCTAASRPPF Trigger: AAACGGCGGGCGGGAGGCTGCTGTACACAGCTGGGCTCCCTCTCAGCGCTGAAGCATGCAGTCCTGGGGCTGTATCTTCTGGTCTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 90 bp | GCAGCAGCCGCAGCTGCATGTCCCGGAGGCTCTCATTCAGCCGGTTaGCGTTCCGAGTCAGCGCCTTCAAGTCATCTGGGGAGCTTCGAG | + |
Preference number: 5 (lower is better) Translates to: AAAAAACPGGSHSAG*RSESAPSSHLGSFE Trigger: CTCGAAGCTCCCCAGATGACTTGAAGGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | TGCTCTGTCAGGTCTGCCTGCAATGGAGCCTGCAGCAGCCGCAGCTaGATGTCCCGGAGGCTCTCATTCAGCCGGTTGACGTTCCGAGTC | + |
Preference number: 5 (lower is better) Translates to: CSVRSACNGACSSRS*MSRRLSFSRLTFRV Trigger: GACTCGGAACGTCAACCGGCTGAATGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | GTTCTGCAGCGCATCCTGAACCTTCCACACCTGCTCTGTCAGGTCTaGCTGCAATGGAGCCTGCAGCAGCCGCAGCTGCATGTCCCGGAG | + |
Preference number: 5 (lower is better) Translates to: VLQRILNLPHLLCQV*LQWSLQQPQLHVPE Trigger: CTCCGGGACATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGAGCAGGTGTGGAAGGTTCAGGATGCGCTGCAGAAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | CATCCAGCAGGCCCGCGTGGCGCTGCAGCAGTAGCTGGCTTCGATTaGTTTCCACCTGCAGCTGGTAGAGTTCCAGCTGTGCGGAGTCAC | + |
Preference number: 5 (lower is better) Translates to: HPAGPRGAAAVAGFD*FPPAAGRVPAVRSH Trigger: GTGACTCCGCACAGCTGGAACTCTACCAGCTGCAGGTGGAAAGCAATCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCTGCTGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | CAGCCAGGCAAGCTGGCCCTGCACCACTCAGCTCAGGGTTTTGAGGTTCTCTGGGTGTCTGCGCTGGCATaGCTCACCAGCACCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: QPGKLALHHSAQGFEVLWVSALA*LTSTCR Trigger: CCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACAC...CCAGAGAACCTCAAAACCCTGAGCTGAGTGGTGCAGGGCCAGCTTGCCTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS TCA 90 bp | CCGGCCAGGGCCAACAACGAGTCTGTCTGGTTCTGCAGCGCATCCTaGACCTTCCACACCTGCTCTGTCAGGTCTGCCTGCAATGGAGCC | + |
Preference number: 5 (lower is better) Translates to: PARANNESVWFCSAS*TFHTCSVRSACNGA Trigger: GGCTCCATTGCAGGCAGACCTGACAGAGCAGGTGTGGAAGGTTCAGGATGCGCTGCAGAACCAGACAGACTCGTTGTTGGCCCTGGCCGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 90 bp | CGCATCCTGAACCTTCCACACCTGCTCTGTCAGGTCTGCCTGCAATaGAGCCTGCAGCAGCCGCAGCTGCATGTCCCGGAGGCTCTCATT | + |
Preference number: 5 (lower is better) Translates to: RILNLPHLLCQVCLQ*SLQQPQLHVPEALI Trigger: AATGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGAGCAGGTGTGGAAGGTTCAGGATGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 90 bp | TCTCCATGTCCATGTGCACCAGCCGCATACGGCGAGTGTCTGCGCTaGCATTGCTCACCAGCACCTGCAGGTCCTGTAGCCACGTGCTGT | + |
Preference number: 5 (lower is better) Translates to: SPCPCAPAAYGECLR*HCSPAPAGPVATCC Trigger: ACAGCACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATGCGGCTGGTGCACATGGACATGGAGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | GAGTCCCTCCACCTCTTGGGTCAAGGACCTGCAGGGGTGGAGCTAGGAACAGGGTTTCCTTGGTCACCTTaGGGTCCCGGTGGCCCTTTG | + |
Preference number: 5 (lower is better) Translates to: ESLHLLGQGPAGVELGTGFPWSP*GPGGPL Trigger: CAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAAA...CCCTGTTCCTAGCTCCACCCCTGCAGGTCCTTGACCCAAGAGGTGGAGGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS GCA 90 bp | CTGGCTTCGATTGCTTTCCACCTGCAGCTGGTAGAGTTCCAGCTGTaGGGAGTCACTCTGCTGTCCTGTTCGGTCCCGCAGCAGGGCCAT | + |
Preference number: 5 (lower is better) Translates to: LASIAFHLQLVEFQL*GVTLLSCSVPQQGH Trigger: ATGGCCCTGCTGCGGGACCGAACAGGACAGCAGAGTGACTCCGCACAGCTGGAACTCTACCAGCTGCAGGTGGAAAGCAATCGAAGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | AGGTCCTCGGTCACCACGTTGAGTGTGGCCAGCTCCTGCTTGAGCTaGATCTCCATGTCCATGTGCACCAGCCGCATACGGCGAGTGTCT | + |
Preference number: 5 (lower is better) Translates to: RSSVTTLSVASSCLS*ISMSMCTSRIRRVS Trigger: AGACACTCGCCGTATGCGGCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGGACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | TTCAGACGCAGGTCCTCGGTCACCACGTTGAGTGTGGCCAGCTCCTaGTTGAGCTGCATCTCCATGTCCATGTGCACCAGCCGCATACGG | + |
Preference number: 5 (lower is better) Translates to: FRRRSSVTTLSVASS*LSCISMSMCTSRIR Trigger: CCGTATGCGGCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGGACCTGCGTCTGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 90 bp | ATCATCACCCTTGGGACCAGGCAGTCCTGGGTCACCTCTCTCTCCTaGCAGACCTCGAGATCCAGGAAGTCCAGGGCTACCTGGCTTTCC | + |
Preference number: 5 (lower is better) Translates to: IITLGTRQSWVTSLS*QTSRSRKSRATWLS Trigger: GGAAAGCCAGGTAGCCCTGGACTTCCTGGATCTCGAGGTCTGCCAGGAGAGAGAGGTGACCCAGGACTGCCTGGTCCCAAGGGTGATGAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 90 bp | CCCACAAGAATCAGGAAGACCAGAAGATACAGCCCCAGGACTGCATaGTTCAGCGCTGAGAGGGAGCCCAGCTGTGTACAGCAGCCTCCC | + |
Preference number: 5 (lower is better) Translates to: PTRIRKTRRYSPRTA*FSAEREPSCVQQPP Trigger: GGGAGGCTGCTGTACACAGCTGGGCTCCCTCTCAGCGCTGAAGCATGCAGTCCTGGGGCTGTATCTTCTGGTCTTCCTGATTCTTGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 90 bp | CCCGGCCCTGGTGTGGGCCGGAGCCATTCACCAGGCGAATCATTGTaGAATCCATGTCACCAGCTCTCTCTCCTCTCTCTCCTTTCTCTC | + |
Preference number: 5 (lower is better) Translates to: PGPGVGRSHSPGESL*NPCHQLSLLSLLSL Trigger: GAGAGAAAGGAGAGAGAGGAGAGAGAGCTGGTGACATGGATTTCACAATGATTCGCCTGGTGAATGGCTCCGGCCCACACCAGGGCCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS CCA 90 bp | GGAAGTCCAGGGCTACCTGGCTTTCCCTCCTTCCCTTCATTTCCTTaGTCACCTTTGGGTCCCGGTGGCCCTTTGGCAAGGGTGATGTTC | + |
Preference number: 5 (lower is better) Translates to: GSPGLPGFPSFPSFP*SPLGPGGPLARVMF Trigger: GAACATCACCCTTGCCAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAAATGAAGGGAAGGAGGGAAAGCCAGGTAGCCCTGGACTTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | AGTAGGGCCAACTGGCAGCAAGGGTGGGGTGGTGTTGGATCAGGCATGAGCCATAGTAGCTGGCTTCGATaGCTTTCCACCTGCAGCTGG | + |
Preference number: 5 (lower is better) Translates to: SRANWQQGWGGVGSGMSHSSWLR*LSTCSW Trigger: CCAGCTGCAGGTGGAAAGCAATCGAAGCCAGCTACT...ATGGCTCATGCCTGATCCAACACCACCCCACCCTTGCTGCCAGTTGGCCCTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 90 bp | GTTCCCTTGCAGTTCACATCGTCCATCCAAATCCTCCCTGTGCCTTaGCCAAAACGAGCTGTCCGGTACACCTCCTCAACCCCGTGGAAG | + |
Preference number: 5 (lower is better) Translates to: VPLQFTSSIQILPVP*PKRAVRYTSSTPWK Trigger: CTTCCACGGGGTTGAGGAGGTGTACCGGACAGCTCGTTTTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGGGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 90 bp | TCTCGGTTCCCTTGCAGTTCACATCGTCCATCCAAATCCTCCCTGTaGCTTGCCCAAAACGAGCTGTCCGGTACACCTCCTCAACCCCGT | + |
Preference number: 5 (lower is better) Translates to: SRFPCSSHRPSKSSL*LAQNELSGTPPQPR Trigger: ACGGGGTTGAGGAGGTGTACCGGACAGCTCGTTTTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGGGAACCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS CCA 90 bp | CCGCCCGCCGTTTGTGACATGGACCATCCTCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAAAGGGTTCTTCAAAGATGGAGCCGT | + |
Preference number: 5 (lower is better) Translates to: PPAVCDMDHPHTGSA*TGSCHQRVLQRWSR Trigger: ACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTCCATGTCACAAACGGCGGGCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | GTTCACACTGACTGCAAGCATGGCCCCCAGGAGTTTTCCCTAATACCACACACTGTGGCCAGCTCCTGCTaGAGCTGCATCTCCATGTCC | + |
Preference number: 5 (lower is better) Translates to: VHTDCKHGPQEFSLIPHTVASSC*SCISMS Trigger: GGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCAC...AGTGTGTGGTATTAGGGAAAACTCCTGGGGGCCATGCTTGCAGTCAGTGTGAAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS GCA 90 bp | CCCATTTGGAGAACTGGCAGTGGAAGATGGAGCTCTCGGTTCCCTTaGAGTTCACATCGTCCATCCAAATCCTCCCTGTGCCTTGCCCAA | + |
Preference number: 5 (lower is better) Translates to: PIWRTGSGRWSSRFP*SSHRPSKSSLCLAQ Trigger: TTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGGGAACCGAGAGCTCCATCTTCCACTGCCAGTTCTCCAAATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS CCA 90 bp | GGTTCAGCTTGGACAGGCTCCTGCCATCAAAGGGTTCTTCAAAGATaGAGCCGTTGTCACGGTCACTCACGGTGTGCAGGTACATGGCTT | + |
Preference number: 5 (lower is better) Translates to: GSAWTGSCHQRVLQR*SRCHGHSRCAGTWL Trigger: AAGCCATGTACCTGCACACCGTGAGTGACCGTGACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | GGAACAGGGACAGGAAGTGATCTGAAACCTATCCACACTCCCAAATCCCACAACCTCTCATTCAGCCGGTaGACGTTCCGAGTCAGCGCC | + |
Preference number: 5 (lower is better) Translates to: GTGTGSDLKPIHTPKSHNLSFSR*TFRVSA Trigger: GGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAG...GTTGTGGGATTTGGGAGTGTGGATAGGTTTCAGATCACTTCCTGTCCCTGTTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS GCA 90 bp | TGTGACATGGACCATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGGTTCTTCAAAGATGGAGCCGTTGTCACGGTCAC | + |
Preference number: 5 (lower is better) Translates to: CDMDHPHTGSAWTGS*HQRVLQRWSRCHGH Trigger: GTGACCGTGACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTCCATGTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 90 bp | CCTTCAAGTCATCTGGGGAGCTTCGAGGCCGGGACACTGCTAAGATaGAGATACCCACAAGAATCAGGAAGACCAGAAGATACAGCCCCA | + |
Preference number: 5 (lower is better) Translates to: PSSHLGSFEAGTLLR*RYPQESGRPEDTAP Trigger: TGGGGCTGTATCTTCTGGTCTTCCTGATTCTTGTGGGTATCTTCATCTTAGCAGTGTCCCGGCCTCGAAGCTCCCCAGATGACTTGAAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | CAAGATCAAATATTGGCTGAGTGGCCAGTCAGGATCTTTGGGGCAACTATACCTGTGGCCAGCTCCTGCTaGAGCTGCATCTCCATGTCC | + |
Preference number: 5 (lower is better) Translates to: QDQILAEWPVRIFGATIPVASSC*SCISMS Trigger: GGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCAC...AGGTATAGTTGCCCCAAAGATCCTGACTGGCCACTCAGCCAATATTTGATCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CAA 90 bp | TTCCCTCCATTCCCAGCTCCAGCTGGGTTTATCAGGTATCTGCCATTTTCTTATTTCCCATCATCACCCTaGGGACCAGGCAGTCCTGGG | + |
Preference number: 5 (lower is better) Translates to: FPPFPAPAGFIRYLPFSYFPSSP*GPGSPG Trigger: CCCAGGACTGCCTGGTCCCAAGGGTGATGATGGGAA...ATAAGAAAATGGCAGATACCTGATAAACCCAGCTGGAGCTGGGAATGGAGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CAA 90 bp | AACCTCCTCCCTGGGTCAAGAGCAAATTATGTTCTCTTTGTAAGCAGGGGGAAGTCACACAGGTTCAGCTaGGACAGGCTCCTGCCATCA | + |
Preference number: 5 (lower is better) Translates to: NLLPGSRANYVLFVSRGKSHRFS*DRLLPS Trigger: TGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGA...CTTCCCCCTGCTTACAAAGAGAACATAATTTGCTCTTGACCCAGGGAGGAGGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CAA 90 bp | AATGACCATATTCACTCTGCTGGCTGTGACCTCCTGTTTGGGTTCTCAAGTCAGTCACACAGGTTCAGCTaGGACAGGCTCCTGCCATCA | + |
Preference number: 5 (lower is better) Translates to: NDHIHSAGCDLLFGFSSQSHRFS*DRLLPS Trigger: TGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGA...CTGACTTGAGAACCCAAACAGGAGGTCACAGCCAGCAGAGTGAATATGGTCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | ACTATAGTAACACTCCCTGCTGGAAGGAACTTCAGGCATTTGAGTTGCAGGTTATTCCCATCATCACCCTaGGGACCAGGCAGTCCTGGG | + |
Preference number: 5 (lower is better) Translates to: TIVTLPAGRNFRHLSCRLFPSSP*GPGSPG Trigger: CCCAGGACTGCCTGGTCCCAAGGGTGATGATGGGAA...TAACCTGCAACTCAAATGCCTGAAGTTCCTTCCAGCAGGGAGTGTTACTATAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS-3UTR CAA 90 bp | AGGCCTCTCATTTCCCATGGGAAGGTTATAGGAATTTCATACTTCTTTCTACCCCTCTCATTCAGCCGGTaGACGTTCCGAGTCAGCGCC | + |
Preference number: 5 (lower is better) Translates to: RPLISHGKVIGISYFFLPLSFSR*TFRVSA Trigger: GGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAG...GGGTAGAAAGAAGTATGAAATTCCTATAACCTTCCCATGGGAAATGAGAGGCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CAA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGGTGTCTGCGCTGGCATaGCTCACCAGCACCTGCAGG | + |
Preference number: 5 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEVSALA*LTSTCR Trigger: CCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACAC...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS-3UTR CAA 90 bp | AAGTGCATGAGCACATGCATGTTATGTAAACATAACAGTTGGTCAGATCATGAGTTTCCTTGGTCACCTTaGGGTCCCGGTGGCCCTTTG | + |
Preference number: 5 (lower is better) Translates to: KCMSTCMLCKHNSWSDHEFPWSP*GPGGPL Trigger: CAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAAA...CTCATGATCTGACCAACTGTTATGTTTACATAACATGCATGTGCTCATGCACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 72 bp | TCGGTCCCGCAGCAGGGCCATCGCCTGCTCAGTCTGTaGCGCCTGCGCGTGCAGCCCCCACAGCGTGCCCTC | + |
Preference number: 6 (lower is better) Translates to: SVPQQGHRLLSL*RLRVQPPQRAL Trigger: GAGGGCACGCTGTGGGGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCGATGGCCCTGCTGCGGGACCGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | TGCTGTCCTGTTCGGTCCCGCAGCAGGGCCATCGCCTaGTCAGTCTGTGCCGCCTGCGCGTGCAGCCCCCAC | + |
Preference number: 6 (lower is better) Translates to: CCPVRSRSRAIA*SVCAACACSPH Trigger: GTGGGGGCTGCACGCGCAGGCGGCACAGACTGAGCAGGCGATGGCCCTGCTGCGGGACCGAACAGGACAGCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | CCCACCCTGCGTGCTAGCCCATCCAGCAGGCCCGCGTaGCGCTGCAGCAGTAGCTGGCTTCGATTGCTTTCC | + |
Preference number: 6 (lower is better) Translates to: PTLRASPSSRPA*RCSSSWLRLLS Trigger: GGAAAGCAATCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCTGCTGGATGGGCTAGCACGCAGGGTGGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 72 bp | TGCTGTGCAGGGCCACGTCATAGGACAGGCTGTGGTTaGGACCACGGAGCGCACCGCCCACGTCAGCCAGCT | + |
Preference number: 6 (lower is better) Translates to: CCAGPRHRTGCG*DHGAHRPRQPA Trigger: AGCTGGCTGACGTGGGCGGTGCGCTCCGTGGTCTCAACCACAGCCTGTCCTATGACGTGGCCCTGCACAGCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | CTGCGTGCTAGCCCATCCAGCAGGCCCGCGTGGCGCTaGAGCAGTAGCTGGCTTCGATTGCTTTCCACCTGC | + |
Preference number: 6 (lower is better) Translates to: LRASPSSRPAWR*SSSWLRLLSTC Trigger: GCAGGTGGAAAGCAATCGAAGCCAGCTACTGCTGCAGCGCCACGCGGGCCTGCTGGATGGGCTAGCACGCAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | CACACCTGCTCTGTCAGGTCTGCCTGCAATGGAGCCTaGAGCAGCCGCAGCTGCATGTCCCGGAGGCTCTCA | + |
Preference number: 6 (lower is better) Translates to: HTCSVRSACNGA*SSRSCMSRRLS Trigger: TGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGAGCAGGTGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | CCATGTGCACCAGCCGCATACGGCGAGTGTCTGCGCTaGCATTGCTCACCAGCACCTGCAGGTCCTGTAGCC | + |
Preference number: 6 (lower is better) Translates to: PCAPAAYGECLR*HCSPAPAGPVA Trigger: GGCTACAGGACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATGCGGCTGGTGCACATGG 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 72 bp | TGCACCAGCCGCATACGGCGAGTGTCTGCGCTGGCATaGCTCACCAGCACCTGCAGGTCCTGTAGCCACGTG | + |
Preference number: 6 (lower is better) Translates to: CTSRIRRVSALA*LTSTCRSCSHV Trigger: CACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATGCGGCTGGTGCA 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | ATGTCCATGTGCACCAGCCGCATACGGCGAGTGTCTGCGCTGGCATaGCTCACCAGCACCTGCAGGTCCTGTAGCCACGTGCTGTGCAGG | + |
Preference number: 6 (lower is better) Translates to: MSMCTSRIRRVSALA*LTSTCRSCSHVLCR Trigger: CCTGCACAGCACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAATGCCAGCGCAGACACTCGCCGTATGCGGCTGGTGCACATGGACAT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | CTTGGGACCAGGCAGTCCTGGGTCACCTCTCTCTCCTaGCAGACCTCGAGATCCAGGAAGTCCAGGGCTACC | + |
Preference number: 6 (lower is better) Translates to: LGTRQSWVTSLS*QTSRSRKSRAT Trigger: GGTAGCCCTGGACTTCCTGGATCTCGAGGTCTGCCAGGAGAGAGAGGTGACCCAGGACTGCCTGGTCCCAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | TGCAGCAGCCGCAGCTGCATGTCCCGGAGGCTCTCATTCAGCCGGTaGACGTTCCGAGTCAGCGCCTTCAAGTCATCTGGGGAGCTTCGA | + |
Preference number: 6 (lower is better) Translates to: CSSRSCMSRRLSFSR*TFRVSAFKSSGELR Trigger: TCGAAGCTCCCCAGATGACTTGAAGGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAGCCTCCGGGACATGCAGCTGCGGCTGCTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | AGACGCAGGTCCTCGGTCACCACGTTGAGTGTGGCCAGCTCCTGCTaGAGCTGCATCTCCATGTCCATGTGCACCAGCCGCATACGGCGA | + |
Preference number: 6 (lower is better) Translates to: RRRSSVTTLSVASSC*SCISMSMCTSRIRR Trigger: TCGCCGTATGCGGCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGGACCTGCGTCT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 72 bp | GCAGCTGCATGTCCCGGAGGCTCTCATTCAGCCGGTTaGCGTTCCGAGTCAGCGCCTTCAAGTCATCTGGGG | + |
Preference number: 6 (lower is better) Translates to: AAACPGGSHSAG*RSESAPSSHLG Trigger: CCCCAGATGACTTGAAGGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAGCCTCCGGGACATGCAGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | CGCATCCTGAACCTTCCACACCTGCTCTGTCAGGTCTaGCTGCAATGGAGCCTGCAGCAGCCGCAGCTGCAT | + |
Preference number: 6 (lower is better) Translates to: RILNLPHLLCQV*LQWSLQQPQLH Trigger: ATGCAGCTGCGGCTGCTGCAGGCTCCATTGCAGGCAGACCTGACAGAGCAGGTGTGGAAGGTTCAGGATGCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | CATTGCTCACCAGCACCTGCAGGTCCTGTAGCCACGTaGTGTGCAGGGCCACGTCATAGGACAGGCTGTGGT | + |
Preference number: 6 (lower is better) Translates to: HCSPAPAGPVAT*CAGPRHRTGCG Trigger: ACCACAGCCTGTCCTATGACGTGGCCCTGCACAGCACGTGGCTACAGGACCTGCAGGTGCTGGTGAGCAATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 72 bp | CGCAGCTGCATGTCCCGGAGGCTCTCATTCAGCCGGTaGACGTTCCGAGTCAGCGCCTTCAAGTCATCTGGG | + |
Preference number: 6 (lower is better) Translates to: RSCMSRRLSFSR*TFRVSAFKSSG Trigger: CCCAGATGACTTGAAGGCGCTGACTCGGAACGTCAACCGGCTGAATGAGAGCCTCCGGGACATGCAGCTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 72 bp | TCCTCGGTCACCACGTTGAGTGTGGCCAGCTCCTGCTaGAGCTGCATCTCCATGTCCATGTGCACCAGCCGC | + |
Preference number: 6 (lower is better) Translates to: SSVTTLSVASSC*SCISMSMCTSR Trigger: GCGGCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGGA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 72 bp | GGTCACCTTTGGGTCCCGGTGGCCCTTTGGCAAGGGTaGTGTTCCTCAAGGCGATGGAGTGTTCCCAGTCCT | + |
Preference number: 6 (lower is better) Translates to: GHLWVPVALWQG*CSSRRWSVPSP Trigger: AGGACTGGGAACACTCCATCGCCTTGAGGAACATCACCCTTGCCAAAGGGCCACCGGGACCCAAAGGTGACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | GTCACCACGTTGAGTGTGGCCAGCTCCTGCTTGAGCTaGATCTCCATGTCCATGTGCACCAGCCGCATACGG | + |
Preference number: 6 (lower is better) Translates to: VTTLSVASSCLS*ISMSMCTSRIR Trigger: CCGTATGCGGCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGAC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | AGGTCCTCGGTCACCACGTTGAGTGTGGCCAGCTCCTaGTTGAGCTGCATCTCCATGTCCATGTGCACCAGC | + |
Preference number: 6 (lower is better) Translates to: RSSVTTLSVASS*LSCISMSMCTS Trigger: GCTGGTGCACATGGACATGGAGATGCAGCTCAAGCAGGAGCTGGCCACACTCAACGTGGTGACCGAGGACCT 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS TCA 72 bp | GCCAACAACGAGTCTGTCTGGTTCTGCAGCGCATCCTaGACCTTCCACACCTGCTCTGTCAGGTCTGCCTGC | + |
Preference number: 6 (lower is better) Translates to: ANNESVWFCSAS*TFHTCSVRSAC Trigger: GCAGGCAGACCTGACAGAGCAGGTGTGGAAGGTTCAGGATGCGCTGCAGAACCAGACAGACTCGTTGTTGGC 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | ATTGCTTTCCACCTGCAGCTGGTAGAGTTCCAGCTGTaGGGAGTCACTCTGCTGTCCTGTTCGGTCCCGCAG | + |
Preference number: 6 (lower is better) Translates to: IAFHLQLVEFQL*GVTLLSCSVPQ Trigger: CTGCGGGACCGAACAGGACAGCAGAGTGACTCCGCACAGCTGGAACTCTACCAGCTGCAGGTGGAAAGCAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | GGTTCCCTTGCAGTTCACATCGTCCATCCAAATCCTCCCTGTGCCTaGCCCAAAACGAGCTGTCCGGTACACCTCCTCAACCCCGTGGAA | + |
Preference number: 6 (lower is better) Translates to: GSLAVHIVHPNPPCA*PKTSCPVHLLNPVE Trigger: TTCCACGGGGTTGAGGAGGTGTACCGGACAGCTCGTTTTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGGGAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 72 bp | ATCAGGAAGACCAGAAGATACAGCCCCAGGACTGCATaGTTCAGCGCTGAGAGGGAGCCCAGCTGTGTACAG | + |
Preference number: 6 (lower is better) Translates to: IRKTRRYSPRTA*FSAEREPSCVQ Trigger: CTGTACACAGCTGGGCTCCCTCTCAGCGCTGAAGCATGCAGTCCTGGGGCTGTATCTTCTGGTCTTCCTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | CCCCATTTGGAGAACTGGCAGTGGAAGATGGAGCTCTCGGTTCCCTaGCAGTTCACATCGTCCATCCAAATCCTCCCTGTGCCTTGCCCA | + |
Preference number: 6 (lower is better) Translates to: PHLENWQWKMELSVP*QFTSSIQILPVPCP Trigger: TGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGGGAACCGAGAGCTCCATCTTCCACTGCCAGTTCTCCAAATGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS TCA 72 bp | GGTGTGGGCCGGAGCCATTCACCAGGCGAATCATTGTaGAATCCATGTCACCAGCTCTCTCTCCTCTCTCTC | + |
Preference number: 6 (lower is better) Translates to: GVGRSHSPGESL*NPCHQLSLLSL Trigger: GAGAGAGAGGAGAGAGAGCTGGTGACATGGATTTCACAATGATTCGCCTGGTGAATGGCTCCGGCCCACACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 72 bp | CAGTTCACATCGTCCATCCAAATCCTCCCTGTGCCTTaGCCAAAACGAGCTGTCCGGTACACCTCCTCAACC | + |
Preference number: 6 (lower is better) Translates to: QFTSSIQILPVP*PKRAVRYTSST Trigger: GGTTGAGGAGGTGTACCGGACAGCTCGTTTTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS GCA 72 bp | CCTTGCAGTTCACATCGTCCATCCAAATCCTCCCTGTaGCTTGCCCAAAACGAGCTGTCCGGTACACCTCCT | + |
Preference number: 6 (lower is better) Translates to: PCSSHRPSKSSL*LAQNELSGTPP Trigger: AGGAGGTGTACCGGACAGCTCGTTTTGGGCAAGGCACAGGGAGGATTTGGATGGACGATGTGAACTGCAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS CCA 72 bp | TGGACAGGCTCCTGCCATCAAAGGGTTCTTCAAAGATaGAGCCGTTGTCACGGTCACTCACGGTGTGCAGGT | + |
Preference number: 6 (lower is better) Translates to: WTGSCHQRVLQR*SRCHGHSRCAG Trigger: ACCTGCACACCGTGAGTGACCGTGACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | CTTCCCTTCATTTCCTTGGTCACCTTTGGGTCCCGGTaGCCCTTTGGCAAGGGTGATGTTCCTCAAGGCGAT | + |
Preference number: 6 (lower is better) Translates to: LPFISLVTFGSR*PFGKGDVPQGD Trigger: ATCGCCTTGAGGAACATCACCCTTGCCAAAGGGCCACCGGGACCCAAAGGTGACCAAGGAAATGAAGGGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | ACCAGCTCTCTCTCCTCTCTCTCCTTTCTCTCCTTTTaGGCCTCGATCACCTTTGAATCCGCGCATGCCCAT | + |
Preference number: 6 (lower is better) Translates to: TSSLSSLSFLSF*ASITFESAHAH Trigger: ATGGGCATGCGCGGATTCAAAGGTGATCGAGGCCCAAAAGGAGAGAAAGGAGAGAGAGGAGAGAGAGCTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022610.15 |
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CDS CAA 72 bp | CTCCTGCCATCAAAGGGTTCTTCAAAGATGGAGCCGTaGTCACGGTCACTCACGGTGTGCAGGTACATGGCT | + |
Preference number: 6 (lower is better) Translates to: LLPSKGSSKMEP*SRSLTVCRYMA Trigger: AGCCATGTACCTGCACACCGTGAGTGACCGTGACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CAA 90 bp | TTGGACAGGCTCCTGCCATCAAAGGGTTCTTCAAAGATGGAGCCGTaGTCACGGTCACTCACGGTGTGCAGGTACATGGCTTTGTTGTCC | + |
Preference number: 6 (lower is better) Translates to: LDRLLPSKGSSKMEP*SRSLTVCRYMALLS Trigger: GGACAACAAAGCCATGTACCTGCACACCGTGAGTGACCGTGACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS GCA 72 bp | GACCATCCTCACACAGGTTCAGCTTGGACAGGCTCCTaGCATCAAAGGGTTCTTCAAAGATGGAGCCGTTGT | + |
Preference number: 6 (lower is better) Translates to: DHPHTGSAWTGS*HQRVLQRWSRC Trigger: ACAACGGCTCCATCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | TTCAGCTCTCTCTCCTCTCTCTCCTTTCTCTCCTTTTaGGCCTCGATCACCTTTGAATCCGCGCATGCCCAT | + |
Preference number: 6 (lower is better) Translates to: FSSLSSLSFLSF*ASITFESAHAH Trigger: ATGGGCATGCGCGGATTCAAAGGTGATCGAGGCCCAAAAGGAGAGAAAGGAGAGAGAGGAGAGAGAGCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000069226.7 |
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CDS TCA 72 bp | CATCTGGGGAGCTTCGAGGCCGGGACACTGCTAAGATaGAGATACCCACAAGAATCAGGAAGACCAGAAGAT | + |
Preference number: 6 (lower is better) Translates to: HLGSFEAGTLLR*RYPQESGRPED Trigger: ATCTTCTGGTCTTCCTGATTCTTGTGGGTATCTTCATCTTAGCAGTGTCCCGGCCTCGAAGCTCCCCAGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |
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CDS CCA 72 bp | GTTTGTGACATGGACCATCCTCACACAGGTTCAGCTTaGACAGGCTCCTGCCATCAAAGGGTTCTTCAAAGA | + |
Preference number: 6 (lower is better) Translates to: VCDMDHPHTGSA*TGSCHQRVLQR Trigger: TCTTTGAAGAACCCTTTGATGGCAGGAGCCTGTCCAAGCTGAACCTGTGTGAGGATGGTCCATGTCACAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000022610.15 ENSMUST00000069226.7 |