Pregenerated sensors for SCARA3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034463Ensembl transcript IDs: ENSMUST00000042046.5
Found 177 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGGCAGACTTCTCTTGCCCTGTGTGGATCAAGGCAGCTCCACATaGTTCTACCGTGACTGTTATGTGTCGAGGGAGGGGGAAAGAGGG | + |
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Preference number: 1 (lower is better) Translates to: PGRLLLPCVDQGSST*FYRDCYVSREGERG Trigger: CCCTCTTTCCCCCTCCCTCGACACATAACAGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 90 bp | TCTCTTGCCCTGTGTGGATCAAGGCAGCTCCACATGATTCTACCGTaGCTGTTATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTAT | + |
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Preference number: 1 (lower is better) Translates to: SLALCGSRQLHMILP*LLCVEGGGKRGGCY Trigger: ATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATAACAGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 90 bp | TCTCTGAACTTGTCAGGGTCAGTATCCATGCATAAGGCCTGGGAATaGCAGCCAGGCAGACTTCTCTTGCCCTGTGTGGATCAAGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: SLNLSGSVSMHKAWE*QPGRLLLPCVDQGS Trigger: GCTGCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGGCTGGCATTCCCAGGCCTTATGCATGGATACTGACCCTGACAAGTTCAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 90 bp | TATCCATGCATAAGGCCTGGGAATGCCAGCCAGGCAGACTTCTCTTaGCCTGTGTGGATCAAGGCAGCTCCACATGATTCTACCGTGACT | + |
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Preference number: 1 (lower is better) Translates to: YPCIRPGNASQADFS*PVWIKAAPHDSTVT Trigger: AGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGGCTGGCATTCCCAGGCCTTATGCATGGATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 90 bp | GAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTaGATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCG | + |
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Preference number: 1 (lower is better) Translates to: ERTPAILGHCGVRSL*ICLRSTKRRRQELP Trigger: CGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 90 bp | TGCACGTTCAGCCTTTCGCATGCCTGGTCCAGCTTGCTGTTCATGTaGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: CTFSLSHAWSSLLFM*ERTPAILGHCGVRS Trigger: TGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGCAAGCTGGACCAGGCATGCGAAAGGCTGAACGTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 90 bp | AGTCAAGCAGAGTGCTCTGGGACCTGTAGGTTCTTGACCTGCCGATaGAACTCTGCTTGGGTTTCTTCCAGGCCACTCTTGAGATGCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQAECSGTCRFLTCR*NSAWVSSRPLLRCR Trigger: TCTGCATCTCAAGAGTGGCCTGGAAGAAACCCAAGCAGAGTTTCATCGGCAGGTCAAGAACCTACAGGTCCCAGAGCACTCTGCTTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 90 bp | AGCTGGATAGAAGTCAAGCAGAGTGCTCTGGGACCTGTAGGTTCTTaGCCTGCCGATGAAACTCTGCTTGGGTTTCTTCCAGGCCACTCT | + |
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Preference number: 1 (lower is better) Translates to: SWIEVKQSALGPVGS*PADETLLGFLPGHS Trigger: AGAGTGGCCTGGAAGAAACCCAAGCAGAGTTTCATCGGCAGGTCAAGAACCTACAGGTCCCAGAGCACTCTGCTTGACTTCTATCCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 90 bp | GGATCAAAGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTaGCCCTCACCTCTCCAACCTGCATGGCAGCATCAGGCCAAAGAC | + |
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Preference number: 1 (lower is better) Translates to: GSKNNDCSNPSGCFL*PSPLQPAWQHQAKD Trigger: GTCTTTGGCCTGATGCTGCCATGCAGGTTGGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCTTTGATCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 90 bp | CTTGCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTaGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAG | + |
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Preference number: 1 (lower is better) Translates to: LAVHVGKNSSHLRSL*GEVIVHLSQVNQEE Trigger: CTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGCAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCCCACCTCCAGCCCTGTaGTCTTCCTGGGAGCTGGAT | + |
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Preference number: 2 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVPPPAL*SSWELD Trigger: ATCCAGCTCCCAGGAAGACCACAGGGCTGGAGGTGG...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CAA 90 bp | GGCAGGGCAAGAGAGGACACAGCTCTAGCCTCTGCCCAGGAGTGTTaGAGTCTGCTGGAGTATGAAGGATCAGGGCAGCTCTACAAAATG | + |
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Preference number: 2 (lower is better) Translates to: GRAREDTALASAQEC*SLLEYEGSGQLYKM Trigger: CATTTTGTAGAGCTGCCCTGATCCTTCATACTCCAGCAGACTCAAACACTCCTGGGCAGAGGCTAGAGCTGTGTCCTCTCTTGCCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR TCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTTCTGGCTGCTTTCTCTaGCCCTCACCTCTCCAACCT | + |
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Preference number: 2 (lower is better) Translates to: YVSREGERGEAAIPGVSFSGCFL*PSPLQP Trigger: AGGTTGGAGAGGTGAGGGTCAGAGAAAGCAGCCAGA...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR TCA 90 bp | GTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCACTTCCAGGCCACTCTTaGGATGCAGAGGTAAGACTG | + |
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Preference number: 2 (lower is better) Translates to: VHLSQVNQEEEARAAVLPLPGHS*DAEVRL Trigger: CAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAG...TGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR GCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCATAAGGCCTGGGAATaGCAGCCAGGCAGACTTCTC | + |
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Preference number: 2 (lower is better) Translates to: HCGVRSLCICLRSTKRRRHKAWE*QPGRLL Trigger: GAGAAGTCTGCCTGGCTGGCATTCCCAGGCCTTATG...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTCCTCTCCAACCTGCATaGCAGCATCAGGCCAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: YVSREGERGEAAIPGVSFPLQPA*QHQAKD Trigger: GTCTTTGGCCTGATGCTGCCATGCAGGTTGGAGAGG...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTTCTCTTGCCCTGTGTaGATCAAGGCAGCTCCACAT | + |
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Preference number: 2 (lower is better) Translates to: SQVNQEEEARAAVLPASSFSCPV*IKAAPH Trigger: ATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAA...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCTCCATGCATAAGGCCTaGGAATGCCAGCCAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVSMHKA*ECQPGR Trigger: TCTGCCTGGCTGGCATTCCCAGGCCTTATGCATGGA...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCGGTCTTCCTGGGAGCTaGATAGAAGTCAAGCAGAGT | + |
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Preference number: 2 (lower is better) Translates to: SQVNQEEEARAAVLPASSGLPGS*IEVKQS Trigger: ACTCTGCTTGACTTCTATCCAGCTCCCAGGAAGACC...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CAA 90 bp | TGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATaGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: WERTPAILGHCGVRS*CICLRSTKRRRQEL Trigger: CAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | AGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTTGGCTATTACTGAGGTTGAACAAGTGGTaGCTTTGGAGAGGGGAGTTT | + |
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Preference number: 2 (lower is better) Translates to: RRRQELPCYQLLPPWLLLRLNKW*LWRGEF Trigger: AAACTCCCCTCTCCAAAGCCACCACTTGTTCAACCT...CAGTAATAGCCAAGGAGGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CAA 90 bp | CAGCTTGCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATaGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAG | + |
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Preference number: 2 (lower is better) Translates to: QLAVHVGKNSSHLRS*WGEVIVHLSQVNQE Trigger: CTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGCAAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR GCA 90 bp | AGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTTGGCTATTACTGTGGGTGTTAAGTCATTaGAGAGACCAGAGTAGTTAC | + |
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Preference number: 2 (lower is better) Translates to: RRRQELPCYQLLPPWLLLWVLSH*RDQSSY Trigger: GTAACTACTCTGGTCTCTGCAATGACTTAACACCCA...CAGTAATAGCCAAGGAGGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CCA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGGCCCTGTGGTCTTCCTaGGAGCTGGATAGAAGTCAA | + |
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Preference number: 2 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKALWSS*ELDRSQ Trigger: TTGACTTCTATCCAGCTCCCAGGAAGACCACAGGGC...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTACTGGGTCAGCGATATTGTGTTGCATGATATTTTCATATGTAGACAGGACAAGAAGACAGGTCTCTaGGGCAGGGCAAGAGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LYWVSDIVLHDIFICRQDKKTGL*GRARED Trigger: GTCCTCTCTTGCCCTGCCTCAGAGACCTGTCTTCTT...GTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR TCA 90 bp | CTTTACTGGGTCAGCGATATTGTGTTGCATGATATTTTCATATGTAGACAGGACCTGCCCAGGAGTGTTTaGGTCTGCTGGAGTATGAAG | + |
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Preference number: 2 (lower is better) Translates to: LYWVSDIVLHDIFICRQDLPRSV*VCWSMK Trigger: CTTCATACTCCAGCAGACTCAAACACTCCTGGGCAG...GTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 72 bp | GGGAATGCCAGCCAGGCAGACTTCTCTTGCCCTGTGTaGATCAAGGCAGCTCCACATGATTCTACCGTGACT | + |
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Preference number: 3 (lower is better) Translates to: GNASQADFSCPV*IKAAPHDSTVT Trigger: AGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGGCTGGCATTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 72 bp | CTGTGTGGATCAAGGCAGCTCCACATGATTCTACCGTaGCTGTTATGTGTCGAGGGAGGGGGAAAGAGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LCGSRQLHMILP*LLCVEGGGKRG Trigger: TCCCCTCTTTCCCCCTCCCTCGACACATAACAGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 72 bp | CTTCTCTTGCCCTGTGTGGATCAAGGCAGCTCCACATaGTTCTACCGTGACTGTTATGTGTCGAGGGAGGGG | + |
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Preference number: 3 (lower is better) Translates to: LLLPCVDQGSST*FYRDCYVSREG Trigger: CCCCTCCCTCGACACATAACAGTCACGGTAGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 72 bp | ATAAGGCCTGGGAATGCCAGCCAGGCAGACTTCTCTTaGCCTGTGTGGATCAAGGCAGCTCCACATGATTCT | + |
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Preference number: 3 (lower is better) Translates to: IRPGNASQADFS*PVWIKAAPHDS Trigger: AGAATCATGTGGAGCTGCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGGCTGGCATTCCCAGGCCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 72 bp | CTGAACTTGTCAGGGTCAGTATCCATGCATAAGGCCTaGGAATGCCAGCCAGGCAGACTTCTCTTGCCCTGT | + |
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Preference number: 3 (lower is better) Translates to: LNLSGSVSMHKA*ECQPGRLLLPC Trigger: ACAGGGCAAGAGAAGTCTGCCTGGCTGGCATTCCCAGGCCTTATGCATGGATACTGACCCTGACAAGTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 72 bp | CCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTaGATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: PAILGHCGVRSL*ICLRSTKRRRQ Trigger: TTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 72 bp | AGCCTTTCGCATGCCTGGTCCAGCTTGCTGTTCATGTaGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGG | + |
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Preference number: 3 (lower is better) Translates to: SLSHAWSSLLFM*ERTPAILGHCG Trigger: CCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGCAAGCTGGACCAGGCATGCGAAAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | TGGGTTTCTTCCAGGCCACTCTTGAGATGCAGAGGTAAGACTGAAAAGAGGAATCCAGGCAGACTTCTCTaGCCCTGTGTGGATCAAGGC | + |
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Preference number: 3 (lower is better) Translates to: WVSSRPLLRCRGKTEKRNPGRLL*PCVDQG Trigger: GCCTTGATCCACACAGGGCAAGAGAAGTCTGCCTGG...ATTCCTCTTTTCAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGAAACCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCTCTTCCAGGCCACTCTaGAGATGCAGAGGTAAGACT | + |
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Preference number: 3 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVSSRPL*RCRGKT Trigger: AGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGA...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CCA 72 bp | CATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTaGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAAC | + |
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Preference number: 3 (lower is better) Translates to: HVGKNSSHLRSL*GEVIVHLSQVN Trigger: GTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 72 bp | TTATACAGCAGGGGTAGATGGGTCGTGCAAGCCAGTTaGACACTGATATTGATGAAGAAGGTAGCACAGAGC | + |
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Preference number: 3 (lower is better) Translates to: LYSRGRWVVQAS*TLILMKKVAQS Trigger: GCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAACTGGCTTGCACGACCCATCTACCCCTGCTGTATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCAAAAACTCTCTGAACTaGTCAGGGTCAGTATCCATG | + |
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Preference number: 3 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVKNSLN*SGSVSM Trigger: CATGGATACTGACCCTGACAAGTTCAGAGAGTTTTT...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGGAACAAGTGGTGGCTTaGGAGAGGGGAGTTTTCCCC | + |
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Preference number: 3 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKEQVVA*ERGVFP Trigger: GGGGAAAACTCCCCTCTCCAAAGCCACCACTTGTTC...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 72 bp | ACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTaGACAGGAAGAAGAAGACAGGTCTCTGAGGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TLILMKKVAQSL*TGRRRQVSEAG Trigger: CCCTGCCTCAGAGACCTGTCTTCTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR GCA 72 bp | GTCAAGGAAATGCAGGCCTTTCCCAGCATCCCTTTCTaGCAGTGTATTCAAGAAGTTCATGAAAGACGAGAA | + |
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Preference number: 3 (lower is better) Translates to: VKEMQAFPSIPF*QCIQEVHERRE Trigger: TTCTCGTCTTTCATGAACTTCTTGAATACACTGGCAGAAAGGGATGCTGGGAAAGGCCTGCATTTCCTTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | CTTTACTGGGTCAGCGATATTGTGTTGCATGATATTTTCATATGTAGACAGGACTGTGGGGTGAGGTCATaGTGCATCTGTCTCAGGTCA | + |
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Preference number: 3 (lower is better) Translates to: LYWVSDIVLHDIFICRQDCGVRS*CICLRS Trigger: TGACCTGAGACAGATGCACAATGACCTCACCCCACA...GTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR TCA 72 bp | GATGAAACTCTGCTTGGGTTTCTTCCAGGCCACTCTTaGGATGCAGAGGTAAGACTGAAAAGAGGAATTTTC | + |
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Preference number: 3 (lower is better) Translates to: DETLLGFLPGHS*DAEVRLKRGIF Trigger: GAAAATTCCTCTTTTCAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGAAACCCAAGCAGAGTTTCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR-3UTR CAA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGATGGTACAGTCATTATaGGGAAGCTTAAGGCTATGC | + |
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Preference number: 3 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKMVQSL*GSLRLC Trigger: GCATAGCCTTAAGCTTCCCAATAATGACTGTACCAT...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CCA 90 bp | GTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGGGGCTCTGGTTCCCTaGTGGACCTGGAGGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: VHLSQVNQEEEARAAVLPGALVP*WTWRSR Trigger: CCTGGACCTCCAGGTCCACCAGGGAACCAGAGCCCC...TGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR GCA 90 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCTTCTGGCAGCGGTTaGAGCGGGGTCCTGCCCGGC | + |
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Preference number: 4 (lower is better) Translates to: TPAILGHCGVRSLCICLRSSGSG*SGVLPG Trigger: GCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGA...CCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR TCA 90 bp | GTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCACCTCCTGGACCTTCCTaGTCTCTTGCCCCAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: VHLSQVNQEEEARAAVLPPPGPS*SLAPAA Trigger: AGCAGCTGGGGCAAGAGATCAGGAAGGTCCAGGAGG...TGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCCCTGCCCGGCCCTCTTaGGTGCATGGGAAGGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVPARPS*VHGKDG Trigger: GCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGG...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTTGGCTATTACTGGAGGTCTGGTCCAGCTaGACCTCCTGGGCTAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RRRQELPCYQLLPPWLLLEVWSS*TSWASS Trigger: GCTGCTAGCCCAGGAGGTCCAGCTGGACCAGACCTC...CAGTAATAGCCAAGGAGGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTTGGCTATTACTGAGGACCCTGAGGTCCTaGGGGTCCCAGATTGCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQELPCYQLLPPWLLLRTLRS*GSQIAR Trigger: CCTGGCAATCTGGGACCCCCAGGACCTCAGGGTCCT...CAGTAATAGCCAAGGAGGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGGCCTGGCTGCCCCCTTaGTCCTCCAGTGCCAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRAWLPP*SSSAKA Trigger: AGCTTTGGCACTGGAGGACCAAGGGGGCAGCCAGGC...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCCTGGCTAATGCGCTGTaGGGAGGCCCCCAGGGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSLANAL*GGPQGG Trigger: ACCACCCTGGGGGCCTCCTCACAGCGCATTAGCCAG...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCGGTGATGTCCATGCCTaGTGTGGTGGCCTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVGDVHA*CGGLPA Trigger: GGCTGGCAGGCCACCACAGCAGGCATGGACATCACC...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTGTGGAAGCCCAGTGTaGAAGACAGCCGCACGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SQVNQEEEARAAVLPASSCGSPV*KTAARR Trigger: ACGACGTGCGGCTGTCTTGCACACTGGGCTTCCACA...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCGAGTCCTCTTGGTCCTaGAGGGCCGGGGACACCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSESSWS*RAGDTS Trigger: CGAGGTGTCCCCGGCCCTCCAGGACCAAGAGGACTC...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCTTCTCCCACAGGTCCTaGCTCCCCAGGCTGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSFSHRS*LPRLPL Trigger: CAGGGGCAGCCTGGGGAGCCAGGACCTGTGGGAGAA...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTCGTCGTCCAGGTACTTaGGCATGCTGTGCACGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: YVSREGERGEAAIPGVSFRRPGT*ACCARG Trigger: ACCACGTGCACAGCATGCTCAAGTACCTGGACGACG...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCCCTCCAGCTCCTCCTaGACCTTCCTGATCTCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRPSSSS*TFLISC Trigger: GCAAGAGATCAGGAAGGTCCAGGAGGAGCTGGAGGG...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCCTTTGAGTCCTCTTaGTCCTGGAGGGCCGGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: TPAILGHCGVRSLCICLRSFESS*SWRAGD Trigger: GTCCCCGGCCCTCCAGGACCAAGAGGACTCAAAGGA...CCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | AGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTTGGCTATTACTGGTCCCAGGGACTGATTaGCCTGGTGAATGGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRQELPCYQLLPPWLLLVPGTD*PGEWRR Trigger: CCTTCTCCATTCACCAGGTCAATCAGTCCCTGGGAC...CAGTAATAGCCAAGGAGGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGGCCCCCAGGGTGGTCTaGATGGTCTTGACTATTTCG | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRAPRVV*MVLTIS Trigger: CGAAATAGTCAAGACCATTCAGACCACCCTGGGGGC...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTCCTGGCTTTCCCTaGGGCCCTGAAGGTCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVIPGFP*GPEGPG Trigger: TCCAGGACCTTCAGGGCCTCAGGGAAAGCCAGGAAT...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCCGAACCTTTCCACTGTaGGATTCTGGGCATATCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SQVNQEEEARAAVLPASSRTFPL*DSGHIG Trigger: CCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCG...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCCCCTTGGTCCTCCAGTaGCAAAGCTGCCCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVPLVLQ*QSCPLS Trigger: GCTCAAAGGGCAGCTTTGGCACTGGAGGACCAAGGG...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTCAGTCTTGGCAGAGGTaGTTCGCAGACCCCCAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YVSREGERGEAAIPGVSFQSWQR*FADPQR Trigger: TCTTTGGGGGTCTGCGAACCACCTCTGCCAAGACTG...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCGGGACCCTGGATGCCTaGTTCACCCTTAGGCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSGTLDA*FTLRPC Trigger: ACAGGGCCTAAGGGTGAACCAGGCATCCAGGGTCCC...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | GTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAAGTTCTGCCAGTCAGTaGCTATCTTCTGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: VHLSQVNQEEEARAAVLPSSASQ*LSSAGS Trigger: TGACCCTGCAGAAGATAGTCACTGACTGGCAGAACT...TGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGACAGATGCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCGCCCTCTTGGGTGCATaGGAAGGATGGCATGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSALLGA*EGWHVL Trigger: GAGGACATGCCATCCTTCCCATGCACCCAAGAGGGC...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTCGAAGGATTTCTCCGTaGTGTGTGTCCACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: YVSREGERGEAAIPGVSFRRISP*CVSTAF Trigger: GAAGGCTGTGGACACACACCACGGAGAAATCCTTCG...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| 3UTR CAA 72 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATaGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPAILGHCGVRS*CICLRSTKRRR Trigger: CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTCTCACAGCCTTTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCGGTGTACAGCAGCCTTaGCATCATAGCACTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SRLSQPFLLTSHRNPIDSGVQQP*HHSTPG Trigger: CCCAGGAGTGCTATGATGTCAAGGCTGCTGTACACC...GGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAAAGGCTGTGAGAGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCCCGATTTCAATCTCATaGGAAGCCATACGTCCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SQVNQEEEARAAVLPASSPISIS*EAIRPS Trigger: GGAAGGACGTATGGCTTCTCATGAGATTGAAATCGG...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGTCAGTGACTATCTTCTaGAGGGTCAGGGTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRSVTIF*RVRVSS Trigger: TGAGGAGACCCTGACCCTGCAGAAGATAGTCACTGA...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCTCTCACAGCCTTTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCGGTGCATGGGAAGGATaGCATGTCCTCGTCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: SRLSQPFLLTSHRNPIDSGAWEG*HVLVFT Trigger: GGTGAAGACGAGGACATGCCATCCTTCCCATGCACC...GGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAAAGGCTGTGAGAGCCTGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTCTTCCAGGCCACTCTTGAGATGCAGAGGTAAGACTGAAAAGAGGAATAGCAGCTCATGGGTCTaGGAGGTCTGGTCCAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WVSSRPLLRCRGKTEKRNSSSWV*EVWSSW Trigger: CCAGCTGGACCAGACCTCCCAGACCCATGAGCTGCT...ATTCCTCTTTTCAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGAAACCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGGCTCTCACAGCCTTTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCCCAGGTCCTCTTCAGTaGCACACAGTACATCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRLSQPFLLTSHRNPIDSPGPLQ*HTVHPC Trigger: ACAGGGATGTACTGTGTGTCACTGAAGAGGACCTGG...GGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAAAGGCTGTGAGAGCCTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGCCTTCATTTCCTCCATaGTCATGGAGAGGTTTCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRPSFPP*SWRGFG Trigger: TCCGAAACCTCTCCATGATCATGGAGGAAATGAAGG...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTGTACATCCCTGTCACTaGCAGCTGATCTCACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVSREGERGEAAIPGVSFVHPCH*QLISLS Trigger: TGAAAGTGAGATCAGCTGGCAGTGACAGGGATGTAC...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCCCTTTAGTCAGCAGAAAATGGGTCTGGGAGGTCTaGTCCAGCTGGACCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLTSHRNPIDSPLVSRKWVWEV*SSWTSW Trigger: CCAGGAGGTCCAGCTGGACCAGACCTCCCAGACCCA...TTTTCTGCTGACTAAAGGGGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCATCCACTCAGCAGTCTaGCCCACCGTGAAGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: RTMIVATLLAAFSDPHLSIHSAV*PTVKLI Trigger: GATCAACTTCACGGTGGGCCAGACTGCTGAGTGGAT...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTTCATCTGTCTTCCTTTaGATCCCGTGGATCCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: YVSREGERGEAAIPGVSFSSVFL*IPWIHS Trigger: TGAGTGGATCCACGGGATCCAAAGGAAGACAGATGA...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGATGCTCTCAGAATTCTaGCTAATGCGCTGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HCGVRSLCICLRSTKRRRMLSEF*LMRCEE Trigger: CTCCTCACAGCGCATTAGCCAGAATTCTGAGAGCAT...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCCCTTTAGTCAGCAGAAAAGGCCTGGAAAGCCTCTaGGGCCAGCTGGCCCTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLLTSHRNPIDSPLVSRKGLESL*GQLALF Trigger: AAAGAGGGCCAGCTGGCCCCAGAGGCTTTCCAGGCC...TTTTCTGCTGACTAAAGGGGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCCCTTTAGTCAGCAGAAAACCCGGCCCTCTTGGGTaGATGGGAAGGATGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: FLLTSHRNPIDSPLVSRKPGPLG*MGRMAC Trigger: ACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGG...TTTTCTGCTGACTAAAGGGGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGACCGTGAAGTTGATCTaGTGTACAGCAGCCTTGACA | + |
|
Preference number: 4 (lower is better) Translates to: TPAILGHCGVRSLCICLRTVKLI*CTAALT Trigger: TGTCAAGGCTGCTGTACACCAGATCAACTTCACGGT...CCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGGCTCTCACAGCCTTTCCTTCTAACCAGCCATAGAAACCCAATAGACTCCAGCATGCTGTGCACGTaGTTGTCGGTGGCATTGATA | + |
|
Preference number: 4 (lower is better) Translates to: SRLSQPFLLTSHRNPIDSSMLCT*LSVALI Trigger: TATCAATGCCACCGACAACCACGTGCACAGCATGCT...GGAGTCTATTGGGTTTCTATGGCTGGTTAGAAGGAAAGGCTGTGAGAGCCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| 3UTR CAA 72 bp | GTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATaGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VHVGKNSSHLRS*WGEVIVHLSQV Trigger: GACCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGCAAGGAGATATCTTCTaGGAGAGAGTCCACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TPAILGHCGVRSLCICLRQGDIF*ERVHLS Trigger: AGAAAGGTGGACTCTCTCTCAGAAGATATCTCCTTG...CCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAGTTACCATCCAAGAGATCTAAGACATTCTTCCCCAGGTAGCTATCCCTACTTGAGCATGCTGTaGACGTGGTTGTCGGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSYHPRDLRHSSPGSYPYLSML*TWLSVA Trigger: TGCCACCGACAACCACGTGCACAGCATGCTCAAGTA...GGGATAGCTACCTGGGGAAGAATGTCTTAGATCTCTTGGATGGTAACTACTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTCTTCCAGGCCACTCTTGAGATGCAGAGGTAAGACTGAAAAGAGGAATTCTTCAGCATGGGTGTaGAAGCCCAGTGTGCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: WVSSRPLLRCRGKTEKRNSSAWV*KPSVQD Trigger: GTCTTGCACACTGGGCTTCCACACCCATGCTGAAGA...ATTCCTCTTTTCAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGAAACCCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR CCA 90 bp | CTTTACTGGGTCAGCGATATTGTGTTGCATGATATTTTCATATGTAGACAGGACCCTGTGGCCCCTCGCTaGCCTGGTGACCCTGTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LYWVSDIVLHDIFICRQDPVAPR*PGDPVF Trigger: AAAGACAGGGTCACCAGGCCAGCGAGGGGCCACAGG...GTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR GCA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGATCTCTTGCCCCAGCTaGTCAGCCTCACGGCAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKISCPS*SASRQK Trigger: CTTTTGCCGTGAGGCTGAGCAGCTGGGGCAAGAGAT...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
||
| CDS-3UTR TCA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGATCTCCTGGGAGATTTaGCTGCTTCTGGTGGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKISWEI*LLLVES Trigger: GCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGAT...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGTTACCATCCAAGAGATCTAAGACATTCTTCCCCAGGTAGCTATCCCATCCGCACTGATGTGTaGAAAGATAGGTTCTTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QSSYHPRDLRHSSPGSYPIRTDV*KDRFFW Trigger: CCAGAAGAACCTATCTTTGCACACATCAGTGCGGAT...GGGATAGCTACCTGGGGAAGAATGTCTTAGATCTCTTGGATGGTAACTACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR GCA 90 bp | CAGAGTAGTTACCATCCAAGAGATCTAAGACATTCTTCCCCAGGTAGCTATCCCTGGTATTGGAGGTCATaGATGTTCTCCTCATGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSYHPRDLRHSSPGSYPWYWRS*MFSSWS Trigger: TGACCATGAGGAGAACATGCATGACCTCCAATACCA...GGGATAGCTACCTGGGGAAGAATGTCTTAGATCTCTTGGATGGTAACTACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CCA 90 bp | TTGCACACTGATATTGATGAAGAAGGTAGCACAGAGCCTTTGAACAGGAAGAAGTTTGACTGCTTCTGGTaGAGAGCAGCTCATGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LHTDIDEEGSTEPLNRKKFDCFW*RAAHGS Trigger: AGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAA...CTTCTTCCTGTTCAAAGGCTCTGTGCTACCTTCTTCATCAATATCAGTGTGCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR TCA 90 bp | CTTTACTGGGTCAGCGATATTGTGTTGCATGATATTTTCATATGTAGACAGGACCTGTGGTGCCCAGCATaGGGGAGACGGATTTATTCA | + |
|
Preference number: 4 (lower is better) Translates to: LYWVSDIVLHDIFICRQDLWCPA*GRRIYS Trigger: TGAATAAATCCGTCTCCCTCATGCTGGGCACCACAG...GTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CAA 72 bp | GAATTTTCTGGACATGTGAATAAAAACTCTCTGAACTaGTCAGGGTCAGTATCCATGCATAAGGCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: EFSGHVNKNSLN*SGSVSMHKAWE Trigger: TTCCCAGGCCTTATGCATGGATACTGACCCTGACAAGTTCAGAGAGTTTTTATTCACATGTCCAGAAAATTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| 3UTR CAA 72 bp | CTGGAAACAGCTCTTTACTGGGTCAGCGATATTGTGTaGCATGATATTTTCATATGTAGACAGGACAATTAT | + |
|
Preference number: 4 (lower is better) Translates to: LETALYWVSDIV*HDIFICRQDNY Trigger: ATAATTGTCCTGTCTACATATGAAAATATCATGCAACACAATATCGCTGACCCAGTAAAGAGCTGTTTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | CTGGCAGCGGTTGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATaGGAAGGATGGCATGTCCTCGTCTTCACCAGCCAGGTCCTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAAVAAGSCPALLGA*EGWHVLVFTSQVLF Trigger: GAAGAGGACCTGGCTGGTGAAGACGAGGACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | GTTGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATGGGAAGGATaGCATGTCCTCGTCTTCACCAGCCAGGTCCTCTTCAGTGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VAAGSCPALLGAWEG*HVLVFTSQVLFSDT Trigger: TGTGTCACTGAAGAGGACCTGGCTGGTGAAGACGAGGACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCTCCTGCCCGGCCCTCTaGGGTGCATGGGAAGGATGG | + |
|
Preference number: 5 (lower is better) Translates to: SQVNQEEEARAAVLPASSSCPAL*GAWEGW Trigger: CCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGA...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | CATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGTCAACCAAGAGGAGGAGGTTCTTCTGGCAGCGGTaGCAGCGGGGTCCTGCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HCGVRSLCICLRSTKRRRFFWQR*QRGPAR Trigger: CCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAA...CCTCCTCCTCTTGGTTGACCTGAGACAGATGCACAATGACCTCACCCCACAATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | AAATCCGCACTGATGTGTGCAAAGATAGGTTCTTCTGGCAGCGGTTaGAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATGGGAAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: KSALMCAKIGSSGSG*SGVLPGPLGCMGRM Trigger: CATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAACCTATCTTTGCACACATCAGTGCGGATTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | GCTACCAACAGGTCCTTTCACGCCTGTATCTCCTTTGAGTCCTCTTaGTCCTGGAGGGCCGGGGACACCTCGGATGACGGTGACATTGCG | + |
|
Preference number: 5 (lower is better) Translates to: ATNRSFHACISFESS*SWRAGDTSDDGDIA Trigger: CGCAATGTCACCGTCATCCGAGGTGTCCCCGGCCCTCCAGGACCAAGAGGACTCAAAGGAGATACAGGCGTGAAAGGACCTGTTGGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | AGAAGGAGCAACTGCCCATCTCCTGGGAGATTTGACTGCTTCTGGTaGAGAGCAGCTCATGGGTCTGGGAGGTCTGGTCCAGCTGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RRSNCPSPGRFDCFW*RAAHGSGRSGPAGP Trigger: AGGTCCAGCTGGACCAGACCTCCCAGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGATGGGCAGTTGCTCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | TGGAGAAGGAGCAACTGCCCATCTCCTGGGAGATTTGACTGCTTCTaGTGGAGAGCAGCTCATGGGTCTGGGAGGTCTGGTCCAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: WRRSNCPSPGRFDCF*WRAAHGSGRSGPAG Trigger: TCCAGCTGGACCAGACCTCCCAGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGATGGGCAGTTGCTCCTTCTCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | AAGAGGTACAAAATCCGCACTGATGTGTGCAAAGATAGGTTCTTCTaGCAGCGGTTGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: KRYKIRTDVCKDRFF*QRLQRGPARPSWVH Trigger: ATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAACCTATCTTTGCACACATCAGTGCGGATTTTGTACCTCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | TATGTGTCGAGGGAGGGGGAAAGAGGGGAGGCTGCTATCCCTGGAGTTTCATTTGACCTTCCTGATCTCTaGCCCCAGCTGCTCAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: YVSREGERGEAAIPGVSFDLPDL*PQLLSL Trigger: GAGGCTGAGCAGCTGGGGCAAGAGATCAGGAAGGTC...AAATGAAACTCCAGGGATAGCAGCCTCCCCTCTTTCCCCCTCCCTCGACACATA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | TCTCAGGTCAACCAAGAGGAGGAGGCAAGAGCTGCCGTGTTACCAGCTTCTTCCCTGCCCTTTGAGCCTTaGAGGCCTGGAAAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SQVNQEEEARAAVLPASSLPFEP*RPGKPL Trigger: CAGAGGCTTTCCAGGCCTCAAAGGCTCAAAGGGCAG...GGAAGAAGCTGGTAACACGGCAGCTCTTGCCTCCTCCTCTTGGTTGACCTGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | TCAGAATTCTGGCTAATGCGCTGTGAGGAGGCCCCCAGGGTGGTCTaGATGGTCTTGACTATTTCGCCAGTCTTGGCAGAGGTGGTTCGC | + |
|
Preference number: 5 (lower is better) Translates to: SEFWLMRCEEAPRVV*MVLTISPVLAEVVR Trigger: GCGAACCACCTCTGCCAAGACTGGCGAAATAGTCAAGACCATTCAGACCACCCTGGGGGCCTCCTCACAGCGCATTAGCCAGAATTCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | TTGTCCAGCTGTAGCTGTAGGCCCATGACCTGCAGAACCAAGTCATaGATGCTCTCAGAATTCTGGCTAATGCGCTGTGAGGAGGCCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSSCSCRPMTCRTKS*MLSEFWLMRCEEAP Trigger: GGGGGCCTCCTCACAGCGCATTAGCCAGAATTCTGAGAGCATGCATGACTTGGTTCTGCAGGTCATGGGCCTACAGCTACAGCTGGACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | TTCTGCAGGGTCAGGGTCTCCTCATCTGTCTTCCTTTGGATCCCGTaGATCCACTCAGCAGTCTGGCCCACCGTGAAGTTGATCTGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: FCRVRVSSSVFLWIP*IHSAVWPTVKLIWC Trigger: ACACCAGATCAACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGAGACCCTGACCCTGCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | GTGACTATCTTCTGCAGGGTCAGGGTCTCCTCATCTGTCTTCCTTTaGATCCCGTGGATCCACTCAGCAGTCTGGCCCACCGTGAAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: VTIFCRVRVSSSVFL*IPWIHSAVWPTVKL Trigger: CAACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGAGACCCTGACCCTGCAGAAGATAGTCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | CCGGGGACACCTCGGATGACGGTGACATTGCGAAGGATTTCTCCGTaGTGTGTGTCCACAGCCTTCATTTCCTCCATGATCATGGAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PGTPRMTVTLRRISP*CVSTAFISSMIMER Trigger: CCTCTCCATGATCATGGAGGAAATGAAGGCTGTGGACACACACCACGGAGAAATCCTTCGCAATGTCACCGTCATCCGAGGTGTCCCCGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | TGGGTTTCTTCCAGGCCACTCTTGAGATGCAGAGGTAAGACTGAAAAGAGGAATGGCCTGGCTGCCCCCTaGGTCCTCCAGTGCCAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WVSSRPLLRCRGKTEKRNGLAAP*VLQCQS Trigger: GCTTTGGCACTGGAGGACCAAGGGGGCAGCCAGGCC...ATTCCTCTTTTCAGTCTTACCTCTGCATCTCAAGAGTGGCCTGGAAGAAACCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | AGTGTGCAAGACAGCCGCACGTCGTCCAGGTACTTGAGCATGCTGTaGACGTGGTTGTCGGTGGCATTGATATTGGTGAAGATAGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: SVQDSRTSSRYLSML*TWLSVALILVKIVP Trigger: CGGCACTATCTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTCTTGCACACT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | ACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCATTGTGCATCTGTCTCAGGACGTCGTCCAGGTACTaGAGCATGCTGTGCACGTGG | + |
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Preference number: 5 (lower is better) Translates to: TPAILGHCGVRSLCICLRTSSRY*SMLCTW Trigger: CCACGTGCACAGCATGCTCAAGTACCTGGACGACGT...CCTGAGACAGATGCACAATGACCTCACCCCACAATGACCTAAGATGGCTGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | GGAAGGATGGCATGTCCTCGTCTTCACCAGCCAGGTCCTCTTCAGTaGCACACAGTACATCCCTGTCACTGCCAGCTGATCTCACTTTCA | + |
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Preference number: 5 (lower is better) Translates to: GRMACPRLHQPGPLQ*HTVHPCHCQLISLS Trigger: TGAAAGTGAGATCAGCTGGCAGTGACAGGGATGTACTGTGTGTCACTGAAGAGGACCTGGCTGGTGAAGACGAGGACATGCCATCCTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | CAGAACCAAGTCATGCATGCTCTCAGAATTCTGGCTAATGCGCTGTaGGGAGGCCCCCAGGGTGGTCTGAATGGTCTTGACTATTTCGCC | + |
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Preference number: 5 (lower is better) Translates to: QNQVMHALRILANAL*GGPQGGLNGLDYFA Trigger: GGCGAAATAGTCAAGACCATTCAGACCACCCTGGGGGCCTCCTCACAGCGCATTAGCCAGAATTCTGAGAGCATGCATGACTTGGTTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | TCCTCATCTGTCTTCCTTTGGATCCCGTGGATCCACTCAGCAGTCTaGCCCACCGTGAAGTTGATCTGGTGTACAGCAGCCTTGACATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSVFLWIPWIHSAV*PTVKLIWCTAALTS Trigger: TGATGTCAAGGCTGCTGTACACCAGATCAACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | TGGTTCGCAGACCCCCAAAGAGTCTGGTGTAGTTCTGCCAGTCAGTaGCTATCTTCTGCAGGGTCAGGGTCTCCTCATCTGTCTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: WFADPQRVWCSSASQ*LSSAGSGSPHLSSF Trigger: AAAGGAAGACAGATGAGGAGACCCTGACCCTGCAGAAGATAGTCACTGACTGGCAGAACTACACCAGACTCTTTGGGGGTCTGCGAACCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | GCCATACGTCCTTCCAGAGACTCGAACCTTTCCACTGTGCGATTCTaGGCATATCGGGTGTGGTATTGGAGGTCATGCATGTTCTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: AIRPSRDSNLSTVRF*AYRVWYWRSCMFSS Trigger: TGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAGTCTCTGGAAGGACGTATGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | CAAGACAGCCGCACGTCGTCCAGGTACTTGAGCATGCTGTGCACGTaGTTGTCGGTGGCATTGATATTGGTGAAGATAGTGCCGATTTCA | + |
|
Preference number: 5 (lower is better) Translates to: QDSRTSSRYLSMLCT*LSVALILVKIVPIS Trigger: TGAAATCGGCACTATCTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCCGGATGACGGTGACATaGCGAAGGATTTCTCCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTMIVATLLAAFSDPHLSRMTVT*RRISPW Trigger: CCACGGAGAAATCCTTCGCAATGTCACCGTCATCCG...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | CATGAGAAGCCATACGTCCTTCCAGAGACTCGAACCTTTCCACTGTaGGATTCTGGGCATATCGGGTGTGGTATTGGAGGTCATGCATGT | + |
|
Preference number: 5 (lower is better) Translates to: HEKPYVLPETRTFPL*DSGHIGCGIGGHAC Trigger: ACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAGTCTCTGGAAGGACGTATGGCTTCTCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | AGAACAATGATTGTAGCAACCCTTCTGGCTGCTTTCTCTGACCCTCACCTCTCCCTCATCTGTCTTCCTTaGGATCCCGTGGATCCACTC | + |
|
Preference number: 5 (lower is better) Translates to: RTMIVATLLAAFSDPHLSLICLP*DPVDPL Trigger: GAGTGGATCCACGGGATCCAAAGGAAGACAGATGAG...GGAGAGGTGAGGGTCAGAGAAAGCAGCCAGAAGGGTTGCTACAATCATTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | AAAAAGGAAGAGATGTTGTCCAGCTGTAGCTGTAGGCCCATGACCTaGAGAACCAAGTCATGCATGCTCTCAGAATTCTGGCTAATGCGC | + |
|
Preference number: 5 (lower is better) Translates to: KKEEMLSSCSCRPMT*RTKSCMLSEFWLMR Trigger: GCGCATTAGCCAGAATTCTGAGAGCATGCATGACTTGGTTCTGCAGGTCATGGGCCTACAGCTACAGCTGGACAACATCTCTTCCTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 90 bp | TCCACTGTGCGATTCTGGGCATATCGGGTGTGGTATTGGAGGTCATaGATGTTCTCCTCATGGTCATCCAAAAAGGAAGAGATGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: STVRFWAYRVWYWRS*MFSSWSSKKEEMLS Trigger: GGACAACATCTCTTCCTTTTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | TCGAACCTTTCCACTGTGCGATTCTGGGCATATCGGGTGTGGTATTaGAGGTCATGCATGTTCTCCTCATGGTCATCCAAAAAGGAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SNLSTVRFWAYRVWY*RSCMFSSWSSKKEE Trigger: CTCTTCCTTTTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | AGAGACTCGAACCTTTCCACTGTGCGATTCTGGGCATATCGGGTGTaGTATTGGAGGTCATGCATGTTCTCCTCATGGTCATCCAAAAAG | + |
|
Preference number: 5 (lower is better) Translates to: RDSNLSTVRFWAYRV*YWRSCMFSSWSSKK Trigger: CTTTTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAGTCTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS-3UTR CAA 90 bp | GCTGTTCATGTGGGAAAGAACTCCAGCCATCTTAGGTCATTGTGGGGTGAGGTCTCGGTGGCATTGATATaGGTGAAGATAGTGCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: AVHVGKNSSHLRSLWGEVSVALI*VKIVPI Trigger: AATCGGCACTATCTTCACCAATATCAATGCCACCGA...GACCTCACCCCACAATGACCTAAGATGGCTGGAGTTCTTTCCCACATGAACAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | CACAAGCTTCTTATTATAGATGGACTGGGCCAAGGAGATATCTTCTaGGAGAGAGTCCACCTTTCTAAAAACCAGAGAGGCCAGCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HKLLIIDGLGQGDIF*ERVHLSKNQRGQHS Trigger: GCTGTGCTGGCCTCTCTGGTTTTTAGAAAGGTGGACTCTCTCTCAGAAGATATCTCCTTGGCCCAGTCCATCTATAATAAGAAGCTTGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 90 bp | TCGGTGGCATTGATATTGGTGAAGATAGTGCCGATTTCAATCTCATaGGAAGCCATACGTCCTTCCAGAGACTCGAACCTTTCCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SVALILVKIVPISIS*EAIRPSRDSNLSTV Trigger: CACAGTGGAAAGGTTCGAGTCTCTGGAAGGACGTATGGCTTCTCATGAGATTGAAATCGGCACTATCTTCACCAATATCAATGCCACCGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 90 bp | GTCCTTGAAGATTTTCTTGCATTGACACAAGCTTCTTATTATAGATaGACTGGGCCAAGGAGATATCTTCTGAGAGAGAGTCCACCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: VLEDFLALTQASYYR*TGPRRYLLRESPPF Trigger: GAAAGGTGGACTCTCTCTCAGAAGATATCTCCTTGGCCCAGTCCATCTATAATAAGAAGCTTGTGTCAATGCAAGAAAATCTTCAAGGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | AGCGGTTGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTaGATGGGAAGGATGGCATGTCCTCGTCTTCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: SGCSGVLPGPLG*MGRMACPRLHQ Trigger: CTGGTGAAGACGAGGACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | CTCCTGGGTGAGGTCCTTCAGGGTGATGTCCATGCCTaGTGTGGTGGCCTGCCAGCCCCTCACCTGTGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLGEVLQGDVHA*CGGLPAPHLCQ Trigger: CTGGCACAGGTGAGGGGCTGGCAGGCCACCACAGCAGGCATGGACATCACCCTGAAGGACCTCACCCAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | GTTGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATaGGAAGGATGGCATGTCCTCGTCTTCACCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VAAGSCPALLGA*EGWHVLVFTSQ Trigger: CTGGCTGGTGAAGACGAGGACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | GGGTCCTGCCCGGCCCTCTTGGGTGCATGGGAAGGATaGCATGTCCTCGTCTTCACCAGCCAGGTCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: GSCPALLGAWEG*HVLVFTSQVLF Trigger: GAAGAGGACCTGGCTGGTGAAGACGAGGACATGCCATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | CCTGGAGGGCCGGGGACACCTCGGATGACGGTGACATaGCGAAGGATTTCTCCGTGGTGTGTGTCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: PGGPGTPRMTVT*RRISPWCVSTA Trigger: GGCTGTGGACACACACCACGGAGAAATCCTTCGCAATGTCACCGTCATCCGAGGTGTCCCCGGCCCTCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | CTGATGTGTGCAAAGATAGGTTCTTCTGGCAGCGGTTaGAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATG | + |
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Preference number: 6 (lower is better) Translates to: LMCAKIGSSGSG*SGVLPGPLGCM Trigger: CATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAACCTATCTTTGCACACATCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | CTTCTGGTGGAGAGCAGCTCATGGGTCTGGGAGGTCTaGTCCAGCTGGACCTCCTGGGCTAGCAGCATCTTC | + |
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Preference number: 6 (lower is better) Translates to: LLVESSSWVWEV*SSWTSWASSIF Trigger: GAAGATGCTGCTAGCCCAGGAGGTCCAGCTGGACCAGACCTCCCAGACCCATGAGCTGCTCTCCACCAGAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | ATGCCTGGTTCACCCTTAGGCCCTGTGGCCCCTCGCTaGCCTGGTGACCCTGTCTTTCCTGAAATTCCTGGC | + |
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Preference number: 6 (lower is better) Translates to: MPGSPLGPVAPR*PGDPVFPEIPG Trigger: GCCAGGAATTTCAGGAAAGACAGGGTCACCAGGCCAGCGAGGGGCCACAGGGCCTAAGGGTGAACCAGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | ACTGATGTGTGCAAAGATAGGTTCTTCTGGCAGCGGTaGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCAT | + |
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Preference number: 6 (lower is better) Translates to: TDVCKDRFFWQR*QRGPARPSWVH Trigger: ATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAACCTATCTTTGCACACATCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | CCCAGTGTGCAAGACAGCCGCACGTCGTCCAGGTACTaGAGCATGCTGTGCACGTGGTTGTCGGTGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: PSVQDSRTSSRY*SMLCTWLSVAL Trigger: CAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTCTTGCACACTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | AAAATCCGCACTGATGTGTGCAAAGATAGGTTCTTCTGGCAGCGGTaGCAGCGGGGTCCTGCCCGGCCCTCTTGGGTGCATGGGAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: KIRTDVCKDRFFWQR*QRGPARPSWVHGKD Trigger: ATCCTTCCCATGCACCCAAGAGGGCCGGGCAGGACCCCGCTGCAACCGCTGCCAGAAGAACCTATCTTTGCACACATCAGTGCGGATTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | GCTGTGAGGAGGCCCCCAGGGTGGTCTGAATGGTCTTaGCTATTTCGCCAGTCTTGGCAGAGGTGGTTCGCA | + |
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Preference number: 6 (lower is better) Translates to: AVRRPPGWSEWS*LFRQSWQRWFA Trigger: TGCGAACCACCTCTGCCAAGACTGGCGAAATAGTCAAGACCATTCAGACCACCCTGGGGGCCTCCTCACAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | TTCTGCAGGGTCAGGGTCTCCTCATCTGTCTTCCTTTaGATCCCGTGGATCCACTCAGCAGTCTGGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: FCRVRVSSSVFL*IPWIHSAVWPT Trigger: GGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGAGACCCTGACCCTGCAGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | GTGTGGAAGCCCAGTGTGCAAGACAGCCGCACGTCGTCCAGGTACTaGAGCATGCTGTGCACGTGGTTGTCGGTGGCATTGATATTGGTG | + |
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Preference number: 6 (lower is better) Translates to: VWKPSVQDSRTSSRY*SMLCTWLSVALILV Trigger: CACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTCTTGCACACTGGGCTTCCACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | TGGCTAATGCGCTGTGAGGAGGCCCCCAGGGTGGTCTaGATGGTCTTGACTATTTCGCCAGTCTTGGCAGAG | + |
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Preference number: 6 (lower is better) Translates to: WLMRCEEAPRVV*MVLTISPVLAE Trigger: CTCTGCCAAGACTGGCGAAATAGTCAAGACCATTCAGACCACCCTGGGGGCCTCCTCACAGCGCATTAGCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | AACTGCCCATCTCCTGGGAGATTTGACTGCTTCTGGTaGAGAGCAGCTCATGGGTCTGGGAGGTCTGGTCCA | + |
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Preference number: 6 (lower is better) Translates to: NCPSPGRFDCFW*RAAHGSGRSGP Trigger: TGGACCAGACCTCCCAGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGATGGGCAGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | AGCAACTGCCCATCTCCTGGGAGATTTGACTGCTTCTaGTGGAGAGCAGCTCATGGGTCTGGGAGGTCTGGT | + |
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Preference number: 6 (lower is better) Translates to: SNCPSPGRFDCF*WRAAHGSGRSG Trigger: ACCAGACCTCCCAGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGATGGGCAGTTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | GTCTTCCTTTGGATCCCGTGGATCCACTCAGCAGTCTaGCCCACCGTGAAGTTGATCTGGTGTACAGCAGCC | + |
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Preference number: 6 (lower is better) Translates to: VFLWIPWIHSAV*PTVKLIWCTAA Trigger: GGCTGCTGTACACCAGATCAACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | GTCAGGGTCTCCTCATCTGTCTTCCTTTGGATCCCGTaGATCCACTCAGCAGTCTGGCCCACCGTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: VRVSSSVFLWIP*IHSAVWPTVKL Trigger: CAACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGAGACCCTGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | ACCTGCAGAACCAAGTCATGCATGCTCTCAGAATTCTaGCTAATGCGCTGTGAGGAGGCCCCCAGGGTGGTC | + |
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Preference number: 6 (lower is better) Translates to: TCRTKSCMLSEF*LMRCEEAPRVV Trigger: GACCACCCTGGGGGCCTCCTCACAGCGCATTAGCCAGAATTCTGAGAGCATGCATGACTTGGTTCTGCAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | TTTCACGCCTGTATCTCCTTTGAGTCCTCTTGGTCCTaGAGGGCCGGGGACACCTCGGATGACGGTGACATT | + |
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Preference number: 6 (lower is better) Translates to: FHACISFESSWS*RAGDTSDDGDI Trigger: AATGTCACCGTCATCCGAGGTGTCCCCGGCCCTCCAGGACCAAGAGGACTCAAAGGAGATACAGGCGTGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | ATGGAGAAGGAGCAACTGCCCATCTCCTGGGAGATTTaGCTGCTTCTGGTGGAGAGCAGCTCATGGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: MEKEQLPISWEI*LLLVESSSWVW Trigger: CCAGACCCATGAGCTGCTCTCCACCAGAAGCAGTCAAATCTCCCAGGAGATGGGCAGTTGCTCCTTCTCCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | GACAGCCGCACGTCGTCCAGGTACTTGAGCATGCTGTaGACGTGGTTGTCGGTGGCATTGATATTGGTGAAG | + |
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Preference number: 6 (lower is better) Translates to: DSRTSSRYLSML*TWLSVALILVK Trigger: CTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | AGTGACTATCTTCTGCAGGGTCAGGGTCTCCTCATCTGTCTTCCTTaGGATCCCGTGGATCCACTCAGCAGTCTGGCCCACCGTGAAGTT | + |
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Preference number: 6 (lower is better) Translates to: SDYLLQGQGLLICLP*DPVDPLSSLAHREV Trigger: AACTTCACGGTGGGCCAGACTGCTGAGTGGATCCACGGGATCCAAAGGAAGACAGATGAGGAGACCCTGACCCTGCAGAAGATAGTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | GACCCCCAAAGAGTCTGGTGTAGTTCTGCCAGTCAGTaGCTATCTTCTGCAGGGTCAGGGTCTCCTCATCTG | + |
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Preference number: 6 (lower is better) Translates to: DPQRVWCSSASQ*LSSAGSGSPHL Trigger: CAGATGAGGAGACCCTGACCCTGCAGAAGATAGTCACTGACTGGCAGAACTACACCAGACTCTTTGGGGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | CCATACGTCCTTCCAGAGACTCGAACCTTTCCACTGTaGGATTCTGGGCATATCGGGTGTGGTATTGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: PYVLPETRTFPL*DSGHIGCGIGG Trigger: ACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAGTCTCTGGAAGGACGTATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | CCTTCCAGAGACTCGAACCTTTCCACTGTGCGATTCTaGGCATATCGGGTGTGGTATTGGAGGTCATGCATG | + |
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Preference number: 6 (lower is better) Translates to: PSRDSNLSTVRF*AYRVWYWRSCM Trigger: CATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAGTCTCTGGAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | CGCACGTCGTCCAGGTACTTGAGCATGCTGTGCACGTaGTTGTCGGTGGCATTGATATTGGTGAAGATAGTG | + |
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Preference number: 6 (lower is better) Translates to: RTSSRYLSMLCT*LSVALILVKIV Trigger: CACTATCTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | CCTCGGATGACGGTGACATTGCGAAGGATTTCTCCGTaGTGTGTGTCCACAGCCTTCATTTCCTCCATGATC | + |
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Preference number: 6 (lower is better) Translates to: PRMTVTLRRISP*CVSTAFISSMI Trigger: GATCATGGAGGAAATGAAGGCTGTGGACACACACCACGGAGAAATCCTTCGCAATGTCACCGTCATCCGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | GACAGCCGCACGTCGTCCAGGTACTTGAGCATGCTGTGCACGTGGTaGTCGGTGGCATTGATATTGGTGAAGATAGTGCCGATTTCAATC | + |
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Preference number: 6 (lower is better) Translates to: DSRTSSRYLSMLCTW*SVALILVKIVPISI Trigger: GATTGAAATCGGCACTATCTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTACCTGGACGACGTGCGGCTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | AGGAAGAGATGTTGTCCAGCTGTAGCTGTAGGCCCATaGCCTGCAGAACCAAGTCATGCATGCTCTCAGAAT | + |
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Preference number: 6 (lower is better) Translates to: RKRCCPAVAVGP*PAEPSHACSQN Trigger: ATTCTGAGAGCATGCATGACTTGGTTCTGCAGGTCATGGGCCTACAGCTACAGCTGGACAACATCTCTTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | TCCACTGTGCGATTCTGGGCATATCGGGTGTGGTATTaGAGGTCATGCATGTTCTCCTCATGGTCATCCAAA | + |
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Preference number: 6 (lower is better) Translates to: STVRFWAYRVWY*RSCMFSSWSSK Trigger: TTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | AACCTTTCCACTGTGCGATTCTGGGCATATCGGGTGTaGTATTGGAGGTCATGCATGTTCTCCTCATGGTCA | + |
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Preference number: 6 (lower is better) Translates to: NLSTVRFWAYRV*YWRSCMFSSWS Trigger: TGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | TTCCACTGTGCGATTCTGGGCATATCGGGTGTGGTATaGGAGGTCATGCATGTTCTCCTCATGGTCATCCAA | + |
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Preference number: 6 (lower is better) Translates to: FHCAILGISGVV*EVMHVLLMVIQ Trigger: TTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | TTCATTTCCTCCATGATCATGGAGAGGTTTCGGACATaGAAGTCTAACCGGGCACTGAGCAGACTGAAGCGC | + |
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Preference number: 6 (lower is better) Translates to: FISSMIMERFRT*KSNRALSRLKR Trigger: GCGCTTCAGTCTGCTCAGTGCCCGGTTAGACTTCAATGTCCGAAACCTCTCCATGATCATGGAGGAAATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | AGGTCATGCATGTTCTCCTCATGGTCATCCAAAAAGGAAGAGATGTaGTCCAGCTGTAGCTGTAGGCCCATGACCTGCAGAACCAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: RSCMFSSWSSKKEEM*SSCSCRPMTCRTKS Trigger: TGACTTGGTTCTGCAGGTCATGGGCCTACAGCTACAGCTGGACAACATCTCTTCCTTTTTGGATGACCATGAGGAGAACATGCATGACCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 90 bp | CTCGAACCTTTCCACTGTGCGATTCTGGGCATATCGGGTGTGGTATaGGAGGTCATGCATGTTCTCCTCATGGTCATCCAAAAAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LEPFHCAILGISGVV*EVMHVLLMVIQKGR Trigger: TCTTCCTTTTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCGCACAGTGGAAAGGTTCGAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS GCA 72 bp | CGATTCTGGGCATATCGGGTGTGGTATTGGAGGTCATaGATGTTCTCCTCATGGTCATCCAAAAAGGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: RFWAYRVWYWRS*MFSSWSSKKEE Trigger: CTCTTCCTTTTTGGATGACCATGAGGAGAACATGCATGACCTCCAATACCACACCCGATATGCCCAGAATCG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CAA 72 bp | TACTTGAGCATGCTGTGCACGTGGTTGTCGGTGGCATaGATATTGGTGAAGATAGTGCCGATTTCAATCTCA | + |
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Preference number: 6 (lower is better) Translates to: YLSMLCTWLSVA*ILVKIVPISIS Trigger: TGAGATTGAAATCGGCACTATCTTCACCAATATCAATGCCACCGACAACCACGTGCACAGCATGCTCAAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | TTGATATTGGTGAAGATAGTGCCGATTTCAATCTCATaGGAAGCCATACGTCCTTCCAGAGACTCGAACCTT | + |
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Preference number: 6 (lower is better) Translates to: LILVKIVPISIS*EAIRPSRDSNL Trigger: AAGGTTCGAGTCTCTGGAAGGACGTATGGCTTCTCATGAGATTGAAATCGGCACTATCTTCACCAATATCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS CCA 72 bp | GATTTTCTTGCATTGACACAAGCTTCTTATTATAGATaGACTGGGCCAAGGAGATATCTTCTGAGAGAGAGT | + |
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Preference number: 6 (lower is better) Translates to: DFLALTQASYYR*TGPRRYLLRES Trigger: ACTCTCTCTCAGAAGATATCTCCTTGGCCCAGTCCATCTATAATAAGAAGCTTGTGTCAATGCAAGAAAATC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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| CDS TCA 72 bp | AAGGAACAATTGATCAGGGCTTTTGGGTCTAGTCCTTaGAGATTTTCTTGCATTGACACAAGCTTCTTATTA | + |
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Preference number: 6 (lower is better) Translates to: KEQLIRAFGSSP*RFSCIDTSFLL Trigger: TAATAAGAAGCTTGTGTCAATGCAAGAAAATCTTCAAGGACTAGACCCAAAAGCCCTGATCAATTGTTCCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000042046.5 |
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