RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SCAPER (Mus musculus)

Ensembl gene IDs: ENSMUSG00000034007

Ensembl transcript IDs: ENSMUST00000037408.9, ENSMUST00000214747.2, ENSMUST00000216595.2, ENSMUST00000217647.2

Found 319 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTaGACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTT +
Preference number: 1 (lower is better)
Translates to: GWVKRAPCGPAHQER*TSLAVFRDMATLIV
Trigger: AACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR CCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTaGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTC +
Preference number: 1 (lower is better)
Translates to: RGPPVAQPIRSGAHH*LYSETWPPSLFLLL
Trigger: GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR TCA 90 bp TTTCTTGTAATTGCTAAATATTTCTCAGGCTCCGCACTGGGTGGGTaGAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACAT +
Preference number: 1 (lower is better)
Translates to: FLVIAKYFSGSALGG*RGPPVAQPIRSGAH
Trigger: ATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTGCGGAGCCTGAGAAATATTTAGCAATTACAAGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR TCA 90 bp GCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATaGACAGTCTTTATAAACAATGCACAGAGGGGTATCTACAGTAGG +
Preference number: 1 (lower is better)
Translates to: AQRKQTQFAKLGRPV*TVFINNAQRGIYSR
Trigger: CCTACTGTAGATACCCCTCTGTGCATTGTTTATAAAGACTGTTCATACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGACGAATAGTTCACAGTaGTTTCTGCCAGTGAAGTTC +
Preference number: 2 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPTNSSQ*FLPVKF
Trigger: GAACTTCACTGGCAGAAAGCACTGTGAACTATTCGT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAAACAAACTCAATTTaGAAAGCTAGGAAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRETNSI*KARKAS
Trigger: ACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTC...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR CCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACCTCCTCAAGGAACAATaGAAAACACTAACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYLLKEQ*KTLTKG
Trigger: TCCCTTTGTTAGTGTTTTCCATTGTTCCTTGAGGAG...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR TCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCTAGGAAGGCCAGTATaGACAGTCTTTATAAACAAT +
Preference number: 2 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPLGRPV*TVFINN
Trigger: ATTGTTTATAAAGACTGTTCATACTGGCCTTCCTAG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGAAACAAACTCAATTTaGAAAGCTAGGAAGGCCAGT +
Preference number: 2 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVETNSI*KARKAS
Trigger: ACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACTCCTCAAGGAACAATaGAAAACACTAACAAAGGGA +
Preference number: 2 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVLLKEQ*KTLTKG
Trigger: TCCCTTTGTTAGTGTTTTCCATTGTTCCTTGAGGAG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR TCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACTAGGAAGGCCAGTATaGACAGTCTTTATAAACAAT +
Preference number: 2 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLGRPV*TVFINN
Trigger: ATTGTTTATAAAGACTGTTCATACTGGCCTTCCTAG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR GCA 72 bp AAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTaGACATCACTGGCTGTATTCAGAGACATGGCCACC +
Preference number: 3 (lower is better)
Translates to: KRAPCGPAHQER*TSLAVFRDMAT
Trigger: GGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACACATGGCCACCCTCATaGTTTCTTTTACTCCGTGTT +
Preference number: 3 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHTWPPS*FLLLRV
Trigger: AACACGGAGTAAAAGAAACAATGAGGGTGGCCATGT...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR TCA 72 bp ATTGCTAAATATTTCTCAGGCTCCGCACTGGGTGGGTaGAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGC +
Preference number: 3 (lower is better)
Translates to: IAKYFSGSALGG*RGPPVAQPIRS
Trigger: GCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTGCGGAGCCTGAGAAATATTTAGCAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR CCA 72 bp CCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTaGCTGTATTCAGAGACATGGCCACCCTCATTGTTT +
Preference number: 3 (lower is better)
Translates to: PVAQPIRSGAHH*LYSETWPPSLF
Trigger: AAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACCCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHPCQPN*HLWEPD
Trigger: GTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGG...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACTCCTCTACACGGGCCTaGCTTTCTGCCTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHSSTRA*LSASKA
Trigger: AGCCTTGGAGGCAGAAAGGCAGGCCCGTGTAGAGGA...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACTGTGGGAGCCAGACATaGGGCAGTTACTGCACCAGG +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHCGSQT*GSYCTR
Trigger: CCTGGTGCAGTAACTGCCCCATGTCTGGCTCCCACA...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACTGCCGGCGTCTGAGATaGTGCCGTGGAAGAGGATAC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHCRRLR*CRGRGY
Trigger: GTATCCTCTTCCACGGCACCATCTCAGACGCCGGCA...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATCACTGGGCCTTGCACTaGGAGGAAGCAGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYHWALH*EEAAMQ
Trigger: CTGCATGGCTGCTTCCTCTCAGTGCAAGGCCCAGTG...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGAGAGGAAGCAGCCATaGAGTCTGTCAATCAGACCC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHERKQP*SLSIRP
Trigger: GGGTCTGATTGACAGACTGCATGGCTGCTTCCTCTC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACAAGGAGCTAGCCATGTaGCGGAATGCAAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHKELAM*RNARDK
Trigger: CTTGTCCCTTGCATTCCGGCACATGGCTAGCTCCTT...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATGGGTGGCGGCCGGACTaGACAATCACCTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYGWRPD*TITWLS
Trigger: AGATAACCAGGTGATTGTTCAGTCCGGCCGCCACCC...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATAGCTGCTGTGAGCGCTaGCAACCGTTCTTCCCTGTC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYSCCER*QPFFPV
Trigger: GACAGGGAAGAACGGTTGGCAGCGCTCACAGCAGCT...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATAGGAAGCCTGCGGCGTaGTGCAGAAATGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYRKPAA*CRNVAI
Trigger: AATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCT...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGAAATGTGGCCATTTTaGGATTCTCATCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHEMWPF*DSHPLG
Trigger: GCCCAGTGGATGAGAATCCCAAAATGGCCACATTTC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATTGCTCTTTCCCGGGCTaGATCTTCACGAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYCSFPG*IFTSFL
Trigger: GAGAAAGCTCGTGAAGATGCAGCCCGGGAAAGAGCA...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATGAGAGGAAGCAGCCATaGAGTCTGTCAATCAGACCC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYERKQP*SLSIRP
Trigger: GGGTCTGATTGACAGACTGCATGGCTGCTTCCTCTC...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACAGCTGTGGTGTTTTGTaGAGCAACACATACTGCATC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHSCGVL*SNTYCI
Trigger: GATGCAGTATGTGTTGCTCCACAAAACACCACAGCT...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACCGATGGCTTCTTCATTaGCCTTTTCTAGACGATCTG +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHRWLLH*PFLDDL
Trigger: CAGATCGTCTAGAAAAGGCCAATGAAGAAGCCATCG...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATCATGCCCTGGAAGTCTaGCAGGCTCCTCTTCTACAA +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYHALEV*QAPLLQ
Trigger: TTGTAGAAGAGGAGCCTGCCAGACTTCCAGGGCATG...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATGGGTCACTGAAATACTaGAAAGGCAGCTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYGSLKY*KGSWQS
Trigger: GCTCTGCCAGCTGCCTTTCCAGTATTTCAGTGACCC...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACCACCACACTCTGATCTaGTTCACAAGTCACATAGAT +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHHHTLI*FTSHID
Trigger: ATCTATGTGACTTGTGAATCAGATCAGAGTGTGGTG...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGATTTTCCACCAGTTTaGCATTTCGGTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHDFPPV*HFGFPS
Trigger: TGATGGAAAACCGAAATGTCAAACTGGTGGAAAATC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACCCAATATACACACTGTaGACTGAGTTCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHPIYTL*TEFSQK
Trigger: TTTCTGAGAGAACTCAGTTCACAGTGTGTATATTGG...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGCTTCTTCTTGCAGTTaGTGTTACATTCATTCTATC +
Preference number: 4 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHASSCS*CYIHSI
Trigger: GATAGAATGAATGTAACATCAACTGCAAGAAGAAGC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATAGCTGTGGTGTTTTGTaGAGCAACACATACTGCATC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYSCGVL*SNTYCI
Trigger: GATGCAGTATGTGTTGCTCCACAAAACACCACAGCT...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATTTCAGAAGTATGCACTaGACTGTCTTGACTACTACC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYFRSMH*TVLTTT
Trigger: GGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAA...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATTTTTCCTTTGAGACTTaGAGACTGGTTATCCACGTG +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYFSFET*RLVIHV
Trigger: CACGTGGATAACCAGTCTTCAAGTCTCAAAGGAAAA...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATGTTTTCCTTTCTGTATaGTTTCTTCAGGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYVFLSV*FLQVKG
Trigger: GCCTTTTACCTGAAGAAAGCATACAGAAAGGAAAAC...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCTTCTGCAGCACCGTTaGGTGGCGGCCGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLLQHR*VAAGLN
Trigger: GTTCAGTCCGGCCGCCACCCAACGGTGCTGCAGAAG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCACTGGGCCTTGCACTaGGAGGAAGCAGCCATGCAG +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVHWALH*EEAAMQ
Trigger: CTGCATGGCTGCTTCCTCTCAGTGCAAGGCCCAGTG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGAC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVPCQPN*HLWEPD
Trigger: GTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGACTGGCCGACCTCTCTaGACAGTCTCCCAACCCTCA +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPTGRPL*TVSQPS
Trigger: TGAGGGTTGGGAGACTGTTCAGAGAGGTCGGCCAGT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCTTGCTGAGCTGCTGTaGGCGCTGCCAACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRLAELL*ALPTVL
Trigger: AAGAACGGTTGGCAGCGCTCACAGCAGCTCAGCAAG...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGACGGGCCTGCCTTTCTaGCTCCAAGGCTCTCTTACG +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPTGLPF*LQGSLT
Trigger: CGTAAGAGAGCCTTGGAGGCAGAAAGGCAGGCCCGT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTAGCTTCTTGCTGAGCTaGTGTGAGCGCTGCCAACCG +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSFLLS*CERCQP
Trigger: CGGTTGGCAGCGCTCACAGCAGCTCAGCAAGAAGCT...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACAGCCATGTGCCGGAATaGAAGGGACAAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYSHVPE*KGQALC
Trigger: GCAGAGGGCTTGTCCCTTGCATTCCGGCACATGGCT...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTGCCGGCGTCTGAGATaGTGCCGTGGAAGAGGATAC +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRCRRLR*CRGRGY
Trigger: GTATCCTCTTCCACGGCACCATCTCAGACGCCGGCA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTAGCCCACACAGACGATaGCCTCATGGAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSPHRR*PHGGGF
Trigger: AAAGCCTCCTCCATGAGGTCATCGTCTGTGTGGGCT...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTCCTCTACACGGGCCTaGCTTTCTGCCTCCAAGGCT +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVSSTRA*LSASKA
Trigger: AGCCTTGGAGGCAGAAAGGCAGGCCCGTGTAGAGGA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTAGCTTCTTGCTGAGCTaGTGTGAGCGCTGCCAACCG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVSFLLS*CERCQP
Trigger: CGGTTGGCAGCGCTCACAGCAGCTCAGCAAGAAGCT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCATCCACTGGGCCTTaGACTGAGAGGAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSSTGP*TERKQP
Trigger: TGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGGAAGCCTGCGGCGTaGTGCAGAAATGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVRKPAA*CRNVAI
Trigger: AATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACCGGCGTCTGAGATGGTaGCGTGGAAGAGGATACAGT +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYRRLRW*RGRGYS
Trigger: ACTGTATCCTCTTCCACGGCACCATCTCAGACGCCG...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTAGCCATGTGCCGGAATaGAAGGGACAAGCCCTCTGC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVSHVPE*KGQALC
Trigger: GCAGAGGGCTTGTCCCTTGCATTCCGGCACATGGCT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGGATTGAGCAGGTGTaGCCTCAGGAGGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVRIEQV*PQEEQN
Trigger: GTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACGTGAATTCCATGCCCTaGAAGTCTGGCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYVNSMP*KSGRLL
Trigger: GAGGAGCCTGCCAGACTTCCAGGGCATGGAATTCAC...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCTCCAGCCAAGTCTGTaGCCTGAAGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLLQPSL*PEEQLS
Trigger: TGACAGCTGCTCTTCAGGCCACAGACTTGGCTGGAG...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTACTGGAAAGGCAGCTaGCAGAGCTTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYYWKGS*QSFCST
Trigger: GGTGCTGCAGAAGCTCTGCCAGCTGCCTTTCCAGTA...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTACTGGAAAGGCAGCTaGCAGAGCTTCTGCAGCACC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVYWKGS*QSFCST
Trigger: GGTGCTGCAGAAGCTCTGCCAGCTGCCTTTCCAGTA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTATTGGTGCACAGGATTaGGCAGGTGTGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTIGAQD*AGVASG
Trigger: TCCTGAGGCCACACCTGCTCAATCCTGTGCACCAAT...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTTCCCAGGCCTGCTaGGGAAATCTGTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYSSQAC*GNLLAS
Trigger: ACTGGCTAACAGATTTCCTCAGCAGGCCTGGGAAGA...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCTTCCCTGTCTCTTaGTCTTTCCCGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPFFPVS*SFPGCI
Trigger: GATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAA...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTTCTTCCCTGTCTCTTaGTCTTTCCCGGGCTGCATC +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRFFPVS*SFPGCI
Trigger: GATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCACGGCCCTGGATACTaGTATTCTCTCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLHGPGY*YSLSQP
Trigger: AGGCTGTGAGAGAGAATAGCAGTATCCAGGGCCGTG...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGAAGCCTGCGGCGTGCTaGAGAAATGTGGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPKPAAC*RNVAIL
Trigger: CAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGTGAATTCCATGCCCTaGAAGTCTGGCAGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVVNSMP*KSGRLL
Trigger: GAGGAGCCTGCCAGACTTCCAGGGCATGGAATTCAC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCTTTCACAGGACACTTaGCTGCAGTGGCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRLSQDT*LQWPSK
Trigger: CTTGCTAGGCCACTGCAGCCAAGTGTCCTGTGAAAG...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCAGACGATGACCTCATaGAGGAGGCTTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVQTMTS*RRLSQD
Trigger: GTCCTGTGAAAGCCTCCTCCATGAGGTCATCGTCTG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCCCCAGGATGTATTTTaGCGCCATGATTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLPQDVF*RHDSRA
Trigger: AGCTCGTGAATCATGGCGTCAAAATACATCCTGGGG...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCCCCAGGATGTATTTTaGCGCCATGATTCACGAGCT +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPPQDVF*RHDSRA
Trigger: AGCTCGTGAATCATGGCGTCAAAATACATCCTGGGG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTGGAGGACCTTCCAGTaGCAGCAAAGCATAGCATAC +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLWRTFQ*QQSIAY
Trigger: GTATGCTATGCTTTGCTGTCACTGGAAGGTCCTCCA...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGCTATCAAGTTTCTTaGGGTACGACCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVSYQVS*GTTLLS
Trigger: GCTGAGGAGGGTCGTACCGCAAGAAACTTGATAGCT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCCGGGACGTCTTTTaGACTGTCATTGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPFRDVF*TVIGAQ
Trigger: CTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAA...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCACGGCCCTGGATACTaGTATTCTCTCTCACAGCCT +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTHGPGY*YSLSQP
Trigger: AGGCTGTGAGAGAGAATAGCAGTATCCAGGGCCGTG...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTAAGCCTGCGGCGTGCTaGAGAAATGTGGCCATTTTG +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTKPAAC*RNVAIL
Trigger: CAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTT...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTAAGGAGCTAGCCATGTaGCGGAATGCAAGGGACAAG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVKELAM*RNARDK
Trigger: CTTGTCCCTTGCATTCCGGCACATGGCTAGCTCCTT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCACGGCTGTTTCCATCTaGTCGGTTGGCAATCAGACA +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLTAVSI*SVGNQT
Trigger: TGTCTGATTGCCAACCGACCAGATGGAAACAGCCGT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCAGACGATGACCTCATaGAGGAGGCTTTCACAGGAC +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTQTMTS*RRLSQD
Trigger: GTCCTGTGAAAGCCTCCTCCATGAGGTCATCGTCTG...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCACTCCACCACACTCTaGTCTGATTCACAAGTCACA +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLHSTTL*SDSQVT
Trigger: TGTGACTTGTGAATCAGATCAGAGTGTGGTGGAGTG...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACGAGGTTGGTCTGCTTTaGGCATCTGTCTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYEVGLL*ASVFSN
Trigger: GTTAGAGAAGACAGATGCTCAAAGCAGACCAACCTC...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGGAGGTTGGTCTGCTTTaGGCATCTGTCTTCTCTAAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVEVGLL*ASVFSN
Trigger: GTTAGAGAAGACAGATGCTCAAAGCAGACCAACCTC...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGATCAGTGCAGTTTTCTaGGCAGTTATTGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVISAVF*AVIAGE
Trigger: CTCGCCTGCAATAACTGCTCAGAAAACTGCACTGAT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTGGAGGACCTTCCAGTaGCAGCAAAGCATAGCATAC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVWRTFQ*QQSIAY
Trigger: GTATGCTATGCTTTGCTGTCACTGGAAGGTCCTCCA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTGCAAAGTCCTGGATaGATGTGGCCAGTAAAACAC +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRVQSPG*MWPVKH
Trigger: GTGTTTTACTGGCCACATTCATCCAGGACTTTGCAC...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACCCAGTGAGGTTGGTCTaGTTTGAGCATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYPVRLV*FEHLSS
Trigger: AGAAGACAGATGCTCAAAGCAGACCAACCTCACTGG...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGCACTGTCATTGGTaGACAGGATTGAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLHCHW*TGLSRC
Trigger: ACACCTGCTCAATCCTGTGCACCAATGACAGTGCAA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTTTCCGGGACGTCTTTTaGACTGTCATTGGTGCACAG +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTFRDVF*TVIGAQ
Trigger: CTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAA...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTTCTCTTGCCTCTGTTaGTCAATTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLFSCLC*SIRASC
Trigger: GCAAGAAGCCCGAATTGAGCAACAGAGGCAAGAGAA...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTTCTCTTGCCTCTGTTaGTCAATTCGGGCTTCTTGC +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYFSCLC*SIRASC
Trigger: GCAAGAAGCCCGAATTGAGCAACAGAGGCAAGAGAA...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGGCTTTCTCCTTCTCTTaGCTCTGTTGCTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPAFSFS*LCCSIR
Trigger: CCGAATTGAGCAACAGAGGCAAGAGAAGGAGAAAGC...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGGCTCTGGTGGAGCTaGACTTTCAATCACAATGTC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVRLWWS*TFNHNV
Trigger: GACATTGTGATTGAAAGTGCAGCTCCACCAGAGCCT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAAGCTGGCAGAGCTTCTaGAGCACCGTTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVSWQSF*STVGWR
Trigger: CCGCCACCCAACGGTGCTGCAGAAGCTCTGCCAGCT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAAGCTGGCAGAGCTTCTaGAGCACCGTTGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKSWQSF*STVGWR
Trigger: CCGCCACCCAACGGTGCTGCAGAAGCTCTGCCAGCT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCTGTTGGCAAAGCTGTaGTGTTTTGTGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLLAKL*CFVEQH
Trigger: GTGTTGCTCCACAAAACACCACAGCTTTGCCAACAG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACTTCTGCAGCACCGTTaGGTGGCGGCCGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLLQHR*VAAGLN
Trigger: GTTCAGTCCGGCCGCCACCCAACGGTGCTGCAGAAG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTATCAGTGCAGTTTTCTaGGCAGTTATTGCAGGCGAG +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTISAVF*AVIAGE
Trigger: CTCGCCTGCAATAACTGCTCAGAAAACTGCACTGAT...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCTCTTGCTCCAGAATaGGCTTGTTCTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPSLAPE*ACSDGC
Trigger: ACAACCATCAGAACAAGCTCATTCTGGAGCAAGAGA...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGTGCAAAGTCCTGGATaGATGTGGCCAGTAAAACAC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVVQSPG*MWPVKH
Trigger: GTGTTTTACTGGCCACATTCATCCAGGACTTTGCAC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTTGCACTGTCATTGGTaGACAGGATTGAGCAGGTGT +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVLHCHW*TGLSRC
Trigger: ACACCTGCTCAATCCTGTGCACCAATGACAGTGCAA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGCCTCATCACGAGCTTaGTTTTCTTCTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLASSRA*FSSCLL
Trigger: GAGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGCATGCCGCCCACTaGTTAATTCAGCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLHAAH*LIQQLF
Trigger: AAAAAGCTGCTGAATTAAGCAGTGGGCGGCATGCAA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTAGGCTCTGGTGGAGCTaGACTTTCAATCACAATGTC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVRLWWS*TFNHNV
Trigger: GACATTGTGATTGAAAGTGCAGCTCCACCAGAGCCT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCTTTGTCATGACTATTaGAGCGCTGGAAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVLCHDY*SAGRKP
Trigger: TGGCTTCCTTCCAGCGCTCCAATAGTCATGACAAAG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCTGTTGGCAAAGCTGTaGTGTTTTGTGGAGCAACAC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVLLAKL*CFVEQH
Trigger: GTGTTGCTCCACAAAACACCACAGCTTTGCCAACAG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCGATGGCTTCTTCATTaGCCTTTTCTAGACGATCTG +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVRWLLH*PFLDDL
Trigger: CAGATCGTCTAGAAAAGGCCAATGAAGAAGCCATCG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTTTTACAGGCTCTGGTaGAGCTGCACTTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRFYRLW*SCTFNH
Trigger: GTGATTGAAAGTGCAGCTCCACCAGAGCCTGTAAAA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTTTACAGGCTCTGGTaGAGCTGCACTTTCAATCAC +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVFYRLW*SCTFNH
Trigger: GTGATTGAAAGTGCAGCTCCACCAGAGCCTGTAAAA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTATTTTTGGTGTAGCTaGACGGCTGTTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPYFWCS*TAVSIW
Trigger: CCAGATGGAAACAGCCGTCCAGCTACACCAAAAATA...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGAAATGTGGCCATTTTaGGATTCTCATCCACTGGGC +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTEMWPF*DSHPLG
Trigger: GCCCAGTGGATGAGAATCCCAAAATGGCCACATTTC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCATACACACTGTGAACTaGGTTCTCTCAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLIHTVN*VLSERG
Trigger: TCCTCTTTCTGAGAGAACTCAGTTCACAGTGTGTAT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGTTTTTCATGCATGTaGATTCCATGCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVSFSCM*IPCPGS
Trigger: ACTTCCAGGGCATGGAATTCACATGCATGAAAAACT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACAGTTTTTCATGCATGTaGATTCCATGCCCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYSFSCM*IPCPGS
Trigger: ACTTCCAGGGCATGGAATTCACATGCATGAAAAACT...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCTTCTTGTCTTCTCTaGCGTTCTTCCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSSCLL*RSSCNS
Trigger: TGAATTGCAGGAAGAACGTCAGAGAAGACAAGAAGA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACTTGCTGAGCTGCTGTaGGCGCTGCCAACCGTTCTT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVLAELL*ALPTVL
Trigger: AAGAACGGTTGGCAGCGCTCACAGCAGCTCAGCAAG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCTGTGGGATCCTGGTaGTTATTGTCAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTPVGSW*LLSNML
Trigger: CAGCATATTTGACAATAATCACCAGGATCCCACAGG...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCAAGAAACGTAAACTCTaGATGGCTACTTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLKKRKL*MATWMV
Trigger: CACCATCCAAGTAGCCATTCAGAGTTTACGTTTCTT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGGGTGGCGGCCGGACTaGACAATCACCTGGTTATCT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVGWRPD*TITWLS
Trigger: AGATAACCAGGTGATTGTTCAGTCCGGCCGCCACCC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAACGGGCCTGCCTTTCTaGCTCCAAGGCTCTCTTACG +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVTGLPF*LQGSLT
Trigger: CGTAAGAGAGCCTTGGAGGCAGAAAGGCAGGCCCGT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTTTCTGAGCAGTTATTaGAGGCGAGGCTGTAAACAT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLFLSSY*RRGCKH
Trigger: ATGTTTACAGCCTCGCCTGCAATAACTGCTCAGAAA...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTTTCTGAGCAGTTATTaGAGGCGAGGCTGTAAACAT +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRFLSSY*RRGCKH
Trigger: ATGTTTACAGCCTCGCCTGCAATAACTGCTCAGAAA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTACACAGCTCATCTCTTaGTCCAGAATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVTQLIS*SRMSLF
Trigger: GAACAAGCTCATTCTGGAGCAAGAGATGAGCTGTGT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGTTCATGTTTGTGGCTaGAGTCACTACTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLVHVCG*SHYLKD
Trigger: ATCCTTCAAGTAGTGACTCCAGCCACAAACATGAAC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTATTTTTGGTGTAGCTaGACGGCTGTTTCCATCTGG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVYFWCS*TAVSIW
Trigger: CCAGATGGAAACAGCCGTCCAGCTACACCAAAAATA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGTCTGTGCAAAGTCCTaGATGAATGTGGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVVCAKS*MNVASK
Trigger: TTTACTGGCCACATTCATCCAGGACTTTGCACAGAC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGTCTGTGCAAAGTCCTaGATGAATGTGGCCAGTAAA +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTVCAKS*MNVASK
Trigger: TTTACTGGCCACATTCATCCAGGACTTTGCACAGAC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCACCACACTCTGATCTaGTTCACAAGTCACATAGAT +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVHHTLI*FTSHID
Trigger: ATCTATGTGACTTGTGAATCAGATCAGAGTGTGGTG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAATTGGTGCACAGGATTaGGCAGGTGTGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVIGAQD*AGVASG
Trigger: TCCTGAGGCCACACCTGCTCAATCCTGTGCACCAAT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTATACACACTGTGAACTaGGTTCTCTCAGAAAGAGGA +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVIHTVN*VLSERG
Trigger: TCCTCTTTCTGAGAGAACTCAGTTCACAGTGTGTAT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCCAATATACACACTGTaGACTGAGTTCTCTCAGAAA +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVPIYTL*TEFSQK
Trigger: TTTCTGAGAGAACTCAGTTCACAGTGTGTATATTGG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTATCATCCTACGTCGTTaGTCTAGTAATTCTTCCTTC +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRIILRR*SSNSSF
Trigger: GAAGGAAGAATTACTAGATCAACGACGTAGGATGAT...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTTCTTCTTGTCTTCTCTaGCGTTCTTCCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTSSCLL*RSSCNS
Trigger: TGAATTGCAGGAAGAACGTCAGAGAAGACAAGAAGA...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCTTTGCTTTATAAGGTaGCTCGGAGCCAGAATTTTT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLLCFIR*LGARIF
Trigger: AAAAATTCTGGCTCCGAGTCACCTTATAAAGCAAAG...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTAAGAAACGTAAACTCTaGATGGCTACTTGGATGGTG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVKKRKL*MATWMV
Trigger: CACCATCCAAGTAGCCATTCAGAGTTTACGTTTCTT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAAGCCCACACAGACGATaGCCTCATGGAGGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKSPHRR*PHGGGF
Trigger: AAAGCCTCCTCCATGAGGTCATCGTCTGTGTGGGCT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTTTTCCTTTGAGACTTaGAGACTGGTTATCCACGTG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVFSFET*RLVIHV
Trigger: CACGTGGATAACCAGTCTTCAAGTCTCAAAGGAAAA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGATAGATTTCATCTACTaGCCGGCGAAGATTGTCAAA +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVIDFIY*PAKIVK
Trigger: TTTGACAATCTTCGCCGGGCAGTAGATGAAATCTAT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTCAATTCGGGCTTCTTaGTCTTTCCTCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVSIRAS*SFLFIN
Trigger: ATTGATGAAGAGGAAAGAGCAAGAAGCCCGAATTGA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCAATCTGTTCCATGTaGCTTCGAATGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSICSM*LRMLSS
Trigger: TGATGAAAGCATTCGAAGGCACATGGAACAGATTGA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATCATCCACTGGGCCTTaGACTGAGAGGAAGCAGCCA +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKSSTGP*TERKQP
Trigger: TGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAAGGATTGAGCAGGTGTaGCCTCAGGAGGAGCAGAAC +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKRIEQV*PQEEQN
Trigger: GTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGTTCATGTTTGTGGCTaGAGTCACTACTTGAAGGAT +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTVHVCG*SHYLKD
Trigger: ATCCTTCAAGTAGTGACTCCAGCCACAAACATGAAC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACTCCAGCCAAGTCTGTaGCCTGAAGAGCAGCTGTCA +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLQPSL*PEEQLS
Trigger: TGACAGCTGCTCTTCAGGCCACAGACTTGGCTGGAG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAACGTAAACTCTGAATaGCTACTTGGATGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVNVNSE*LLGWCS
Trigger: AGAACACCATCCAAGTAGCCATTCAGAGTTTACGTT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGAACGTAAACTCTGAATaGCTACTTGGATGGTGTTCT +
Preference number: 4 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPNVNSE*LLGWCS
Trigger: AGAACACCATCCAAGTAGCCATTCAGAGTTTACGTT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACATTCATTCTATCTGTTaGTGGGCTTTGAATCACATG +
Preference number: 4 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYIHSIC*WALNHM
Trigger: CATGTGATTCAAAGCCCATCAACAGATAGAATGAAT...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGCTTCTTCTTGCAGTTaGTGTTACATTCATTCTATC +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLASSCS*CYIHSI
Trigger: GATAGAATGAATGTAACATCAACTGCAAGAAGAAGC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTTCATTTCCTGTGTTaGTATTTTTGGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVFHFLC*YFWCSW
Trigger: CCAGCTACACCAAAAATATCAACACAGGAAATGAAA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTTCTGGAATTTTCCTTTaGGACTTGAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSGIFL*DLKTGY
Trigger: ATAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGA...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTCTGGAATTTTCCTTTaGGACTTGAAGACTGGTTAT +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLSGIFL*DLKTGY
Trigger: ATAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGA...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATCTTCCCAGGCCTGCTaGGGAAATCTGTTAGCCAGT +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKSSQAC*GNLLAS
Trigger: ACTGGCTAACAGATTTCCTCAGCAGGCCTGGGAAGA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGTTTTCCTTTCTGTATaGTTTCTTCAGGTAAAAGGC +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLVFLSV*FLQVKG
Trigger: GCCTTTTACCTGAAGAAAGCATACAGAAAGGAAAAC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTCAATTCGGGCTTCTTaGTCTTTCCTCTTCATCAAT +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVSIRAS*SFLFIN
Trigger: ATTGATGAAGAGGAAAGAGCAAGAAGCCCGAATTGA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATGCTCTTTCCCGGGCTaGATCTTCACGAGCTTTCTC +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVCSFPG*IFTSFL
Trigger: GAGAAAGCTCGTGAAGATGCAGCCCGGGAAAGAGCA...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTTCAATCTGTTCCATGTaGCTTCGAATGCTTTCATCA +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTSICSM*LRMLSS
Trigger: TGATGAAAGCATTCGAAGGCACATGGAACAGATTGA...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGCTGTAAACATTGATTaGATTGCAGAGAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVAVNID*IAERLR
Trigger: CCTAAGTCTCTCTGCAATGCAATCAATGTTTACAGC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACATGCCCTGGAAGTCTaGCAGGCTCCTCTTCTACAA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVHALEV*QAPLLQ
Trigger: TTGTAGAAGAGGAGCCTGCCAGACTTCCAGGGCATG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCAAACGAAATCTGATCTaGCACATTCTCTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLKRNLI*HILFLQ
Trigger: TTGGAGAAAGAGAATGTGCCAGATCAGATTTCGTTT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAAACGAAATCTGATCTaGCACATTCTCTTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVKRNLI*HILFLQ
Trigger: TTGGAGAAAGAGAATGTGCCAGATCAGATTTCGTTT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACTTTCACAGGACACTTaGCTGCAGTGGCCTAGCAAG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLSQDT*LQWPSK
Trigger: CTTGCTAGGCCACTGCAGCCAAGTGTCCTGTGAAAG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGGGTCACTGAAATACTaGAAAGGCAGCTGGCAGAGC +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKGSLKY*KGSWQS
Trigger: GCTCTGCCAGCTGCCTTTCCAGTATTTCAGTGACCC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTTTCATTTCCTGTGTTaGTATTTTTGGTGTAGCTGG +
Preference number: 4 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVFHFLC*YFWCSW
Trigger: CCAGCTACACCAAAAATATCAACACAGGAAATGAAA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAAGCTATCAAGTTTCTTaGGGTACGACCCTCCTCAGC +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVSYQVS*GTTLLS
Trigger: GCTGAGGAGGGTCGTACCGCAAGAAACTTGATAGCT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTCAATTTTTCTTGGGTaGCTTGTTTTTGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVSIFLG*LVFVGL
Trigger: AAGTCCTACAAAAACAAGGCACCCAAGAAAAATTGA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAACGGCTGTTTCCATCTaGTCGGTTGGCAATCAGACA +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKTAVSI*SVGNQT
Trigger: TGTCTGATTGCCAACCGACCAGATGGAAACAGCCGT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACCAGTGAGGTTGGTCTaGTTTGAGCATCTGTCTTCT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVPVRLV*FEHLSS
Trigger: AGAAGACAGATGCTCAAAGCAGACCAACCTCACTGG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATTTAGCGAGAACTTCTaGCATAGACCAGTCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKFSENF*HRPVSS
Trigger: GCTGCTGACTGGTCTATGGCAGAAGTTCTCGCTAAA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000037408.9
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGCTTTCTCCTTCTCTTaGCTCTGTTGCTCAATTCGG +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVAFSFS*LCCSIR
Trigger: CCGAATTGAGCAACAGAGGCAAGAGAAGGAGAAAGC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACTTTGTCATGACTATTaGAGCGCTGGAAGGAAGCCA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVLCHDY*SAGRKP
Trigger: TGGCTTCCTTCCAGCGCTCCAATAGTCATGACAAAG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGCTTCTCTCCAGTTGTaGATGTTATTTTACATTCTA +
Preference number: 4 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTASLQL*MLFYIL
Trigger: TAGAATGTAAAATAACATCCACAACTGGAGAGAAGC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACTTTTGCACTGTCATTaGTGCACAGGATTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVLLHCH*CTGLSR
Trigger: CCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACTTTTGCACTGTCATTaGTGCACAGGATTGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLLHCH*CTGLSR
Trigger: CCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
3UTR CAA 72 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATaGTTTCTTTTACTCCGTGTTGTTTCAAGTAAATTA +
Preference number: 4 (lower is better)
Translates to: HHWLYSETWPPS*FLLLRVVSSKL
Trigger: TAATTTACTTGAAACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACCTGTGGGATCCTGGTaGTTATTGTCAAATATGCTG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKPVGSW*LLSNML
Trigger: CAGCATATTTGACAATAATCACCAGGATCCCACAGG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATCTCTTGCTCCAGAATaGGCTTGTTCTGATGGTTGT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVSLAPE*ACSDGC
Trigger: ACAACCATCAGAACAAGCTCATTCTGGAGCAAGAGA...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGCCTCATCACGAGCTTaGTTTTCTTCTTGTCTTCTC +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVASSRA*FSSCLL
Trigger: GAGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATTGCATGCCGCCCACTaGTTAATTCAGCAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKLHAAH*LIQQLF
Trigger: AAAAAGCTGCTGAATTAAGCAGTGGGCGGCATGCAA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAACACAGCTCATCTCTTaGTCCAGAATGAGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVTQLIS*SRMSLF
Trigger: GAACAAGCTCATTCTGGAGCAAGAGATGAGCTGTGT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGAATGGCTACTTGGATaGTGTTCTGGGTGTAACTGT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVEWLLG*CSGCNC
Trigger: ACAGTTACACCCAGAACACCATCCAAGTAGCCATTC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGAATGGCTACTTGGATaGTGTTCTGGGTGTAACTGT +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKEWLLG*CSGCNC
Trigger: ACAGTTACACCCAGAACACCATCCAAGTAGCCATTC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATTCAGAAGTATGCACTaGACTGTCTTGACTACTACC +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVFRSMH*TVLTTT
Trigger: GGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAA...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAAATCACCTGGTTATCTaGGTGGTTGACAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVNHLVI*VVDSEV
Trigger: TACTTCACTGTCAACCACCCAGATAACCAGGTGATT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGATTTTCCACCAGTTTaGCATTTCGGTTTTCCATCA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVDFPPV*HFGFPS
Trigger: TGATGGAAAACCGAAATGTCAAACTGGTGGAAAATC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGCTGTAAACATTGATTaGATTGCAGAGAGACTTAGG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKAVNID*IAERLR
Trigger: CCTAAGTCTCTCTGCAATGCAATCAATGTTTACAGC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR TCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAATTCATTCTATCTGTTaGTGGGCTTTGAATCACATG +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKIHSIC*WALNHM
Trigger: CATGTGATTCAAAGCCCATCAACAGATAGAATGAAT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR GCA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATCAATTTTTCTTGGGTaGCTTGTTTTTGTAGGACTT +
Preference number: 4 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKSIFLG*LVFVGL
Trigger: AAGTCCTACAAAAACAAGGCACCCAAGAAAAATTGA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
34% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGCTTCTCTCCAGTTGTaGATGTTATTTTACATTCTA +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVASLQL*MLFYIL
Trigger: TAGAATGTAAAATAACATCCACAACTGGAGAGAAGC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CCA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTACTCTCAGAAAGAGGATaGTCAGAAGAATGTAATAAT +
Preference number: 4 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVLSERG*SEECNN
Trigger: ATTATTACATTCTTCTGACCATCCTCTTTCTGAGAG...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGCTTCTGCAGCACCGTaGGGTGGCGGCCGGACTGAA +
Preference number: 5 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHASAAP*GGGRTE
Trigger: TTCAGTCCGGCCGCCACCCAACGGTGCTGCAGAAGC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACACTGCCCGGCGAAGATaGTCAAAAAGAAATGCCCAG +
Preference number: 5 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHTARRR*SKRNAQ
Trigger: CTGGGCATTTCTTTTTGACAATCTTCGCCGGGCAGT...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGAAGCGATCAGGACATaGCAGAGAGAACACTGCTTC +
Preference number: 5 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHEAIRT*QREHCF
Trigger: GAAGCAGTGTTCTCTCTGCAATGTCCTGATCGCTTC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACGAAAAGTCACTGTCGTaGTCAGTCTCGATGTTAATG +
Preference number: 5 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHEKSLS*SVSMLM
Trigger: CATTAACATCGAGACTGACAACGACAGTGACTTTTC...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS CCA 90 bp CCCACACAGACGATGACCTCATGGAGGAGGCTTTCACAGGACACTTaGCTGCAGTGGCCTAGCAAGGAGCTAGCCATGTGCCGGAATGCA +
Preference number: 5 (lower is better)
Translates to: PTQTMTSWRRLSQDT*LQWPSKELAMCRNA
Trigger: TGCATTCCGGCACATGGCTAGCTCCTTGCTAGGCCACTGCAGCCAAGTGTCCTGTGAAAGCCTCCTCCATGAGGTCATCGTCTGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATAGCTTTCTCCTTCTCTaGCCTCTGTTGCTCAATTCG +
Preference number: 5 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYSFLLL*PLLLNS
Trigger: CGAATTGAGCAACAGAGGCAAGAGAAGGAGAAAGCT...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS CCA 90 bp AGCGAAGGAAACAGCACTTTGATGAGCCTCGGGTCACTGAAATACTaGAAAGGCAGCTGGCAGAGCTTCTGCAGCACCGTTGGGTGGCGG +
Preference number: 5 (lower is better)
Translates to: SEGNSTLMSLGSLKY*KGSWQSFCSTVGWR
Trigger: CCGCCACCCAACGGTGCTGCAGAAGCTCTGCCAGCTGCCTTTCCAGTATTTCAGTGACCCGAGGCTCATCAAAGTGCTGTTTCCTTCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATTTTCCATCTGGTCGGTaGGCAATCAGACAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYFPSGR*AIRQLK
Trigger: TTTTAGCTGTCTGATTGCCAACCGACCAGATGGAAA...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CACTGGGTGGGTGAAGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACTTCTGGAATTTTCCTTaGAGACTTGAAGACTGGTTA +
Preference number: 5 (lower is better)
Translates to: HWVGEEGPLWPSPSGAVHFWNFP*RLEDWL
Trigger: TAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGAA...GTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCTTCACCCACCCAGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS GCA 90 bp TTTCTGCAGCTCTTCCATAGCTTCTTGCTGAGCTGCTGTGAGCGCTaGCAACCGTTCTTCCCTGTCTCTTGCTCTTTCCCGGGCTGCATC +
Preference number: 5 (lower is better)
Translates to: FLQLFHSFLLSCCER*QPFFPVSCSFPGCI
Trigger: GATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAACGGTTGGCAGCGCTCACAGCAGCTCAGCAAGAAGCTATGGAAGAGCTGCAGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS GCA 90 bp TGGCTACTTGGATGGTGTTCTGGGTGTAACTGTCCTTGGGACTCGTaGCGGCGTCTGAGATGGTGCCGTGGAAGAGGATACAGTAGAGCA +
Preference number: 5 (lower is better)
Translates to: WLLGWCSGCNCPWDS*RRLRWCRGRGYSRA
Trigger: TGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAGAACACCATCCAAGTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 90 bp GCATACACATCCCACGTAGGAAGCCTGCGGCGTGCTGCAGAAATGTaGCCATTTTGGGATTCTCATCCACTGGGCCTTGCACTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: AYTSHVGSLRRAAEM*PFWDSHPLGLALRG
Trigger: TCCTCTCAGTGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCTACGTGGGATGTGTATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp AGAGGGCCCCCTGTGGCCCAGCCCATCAGGAGCGGTGCACATCACTGGCTGTATGAAAAGTCACTGTCGTaGTCAGTCTCGATGTTAATG +
Preference number: 5 (lower is better)
Translates to: RGPPVAQPIRSGAHHWLYEKSLS*SVSMLM
Trigger: CATTAACATCGAGACTGACAACGACAGTGACTTTTC...ATACAGCCAGTGATGTGCACCGCTCCTGATGGGCTGGGCCACAGGGGGCCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp GAGGAGCAGAACCAGTATGATGAGCCTTTACCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGACATGGGGCAGTTACTGCACCAGGTA +
Preference number: 5 (lower is better)
Translates to: EEQNQYDEPLPCQPN*HLWEPDMGQLLHQV
Trigger: TACCTGGTGCAGTAACTGCCCCATGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGGTAAAGGCTCATCATACTGGTTCTGCTCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 90 bp TCTGGGTGTAACTGTCCTTGGGACTCGTGCCGGCGTCTGAGATGGTaGCGTGGAAGAGGATACAGTAGAGCATATGTAGAACTCCAGCCA +
Preference number: 5 (lower is better)
Translates to: SGCNCPWDSCRRLRW*RGRGYSRAYVELQP
Trigger: TGGCTGGAGTTCTACATATGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 90 bp AACTCTGAATGGCTACTTGGATGGTGTTCTGGGTGTAACTGTCCTTaGGACTCGTGCCGGCGTCTGAGATGGTGCCGTGGAAGAGGATAC +
Preference number: 5 (lower is better)
Translates to: NSEWLLGWCSGCNCP*DSCRRLRWCRGRGY
Trigger: GTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAGAACACCATCCAAGTAGCCATTCAGAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 90 bp ACAGCAAAGCATAGCATACACATCCCACGTAGGAAGCCTGCGGCGTaGTGCAGAAATGTGGCCATTTTGGGATTCTCATCCACTGGGCCT +
Preference number: 5 (lower is better)
Translates to: TAKHSIHIPRRKPAA*CRNVAILGFSSTGP
Trigger: AGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCTACGTGGGATGTGTATGCTATGCTTTGCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 90 bp TGTTCTGGGTGTAACTGTCCTTGGGACTCGTGCCGGCGTCTGAGATaGTGCCGTGGAAGAGGATACAGTAGAGCATATGTAGAACTCCAG +
Preference number: 5 (lower is better)
Translates to: CSGCNCPWDSCRRLR*CRGRGYSRAYVELQ
Trigger: CTGGAGTTCTACATATGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAGAACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGCTTCTGCAGCACCGTaGGGTGGCGGCCGGACTGAA +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTASAAP*GGGRTE
Trigger: TTCAGTCCGGCCGCCACCCAACGGTGCTGCAGAAGC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS GCA 90 bp TGCTGCAGAAATGTGGCCATTTTGGGATTCTCATCCACTGGGCCTTaGACTGAGAGGAAGCAGCCATGCAGTCTGTCAATCAGACCCATG +
Preference number: 5 (lower is better)
Translates to: CCRNVAILGFSSTGP*TERKQPCSLSIRPM
Trigger: CATGGGTCTGATTGACAGACTGCATGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTGCAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 90 bp AGCATCTTTCCGTTCATTTTTCCGGGACGTCTTTTGCACTGTCATTaGTGCACAGGATTGAGCAGGTGTGGCCTCAGGAGGAGCAGAACC +
Preference number: 5 (lower is better)
Translates to: SIFPFIFPGRLLHCH*CTGLSRCGLRRSRT
Trigger: GGTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGGAAAGATGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGGGCGTAATCGGTGCTaGCATGCCGCCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLGRNRC*HAAHCL
Trigger: TAAGCAGTGGGCGGCATGCAAGCACCGATTACGCCC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGGGGCGTAATCGGTGCTaGCATGCCGCCCACTGCTTA +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVGRNRC*HAAHCL
Trigger: TAAGCAGTGGGCGGCATGCAAGCACCGATTACGCCC...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp CAGAAATGTGGCCATTTTGGGATTCTCATCCACTGGGCCTTGCACTaGGAGGAAGCAGCCATGCAGTCTGTCAATCAGACCCATGTTCAC +
Preference number: 5 (lower is better)
Translates to: QKCGHFGILIHWALH*EEAAMQSVNQTHVH
Trigger: GTGAACATGGGTCTGATTGACAGACTGCATGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 90 bp CAGTTCCAGGTAGTTCCCGGGGTTCTGGAATTTTCCTTTGAGACTTaGAGACTGGTTATCCACGTGACCCGGAGTCTGTGCAAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: QFQVVPGVLEFSFET*RLVIHVTRSLCKVL
Trigger: CAGGACTTTGCACAGACTCCGGGTCACGTGGATAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGAACCCCGGGAACTACCTGGAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 90 bp ATCTTTCCGTTCATTTTTCCGGGACGTCTTTTGCACTGTCATTGGTaGACAGGATTGAGCAGGTGTGGCCTCAGGAGGAGCAGAACCAGT +
Preference number: 5 (lower is better)
Translates to: IFPFIFPGRLLHCHW*TGLSRCGLRRSRTS
Trigger: ACTGGTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGGAAAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 90 bp CTTGCTCTTTCCCGGGCTGCATCTTCACGAGCTTTCTCCTTCTCTTaGCTCTGTTGCTCAATTCGGGCTTCTTGCTCTTTCCTCTTCATC +
Preference number: 5 (lower is better)
Translates to: LALSRAASSRAFSFS*LCCSIRASCSFLFI
Trigger: GATGAAGAGGAAAGAGCAAGAAGCCCGAATTGAGCAACAGAGGCAAGAGAAGGAGAAAGCTCGTGAAGATGCAGCCCGGGAAAGAGCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 90 bp GGAAGAGGATACAGTAGAGCATATGTAGAACTCCAGCCAAGTCTGTaGCCTGAAGAGCAGCTGTCAGCCCTGTGGGATCCTGGTGATTAT +
Preference number: 5 (lower is better)
Translates to: GRGYSRAYVELQPSL*PEEQLSALWDPGDY
Trigger: ATAATCACCAGGATCCCACAGGGCTGACAGCTGCTCTTCAGGCCACAGACTTGGCTGGAGTTCTACATATGCTCTACTGTATCCTCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 90 bp TGGGATCCTGGTGATTATTGTCAAATATGCTGGAGGACCTTCCAGTaGCAGCAAAGCATAGCATACACATCCCACGTAGGAAGCCTGCGG +
Preference number: 5 (lower is better)
Translates to: WDPGDYCQICWRTFQ*QQSIAYTSHVGSLR
Trigger: CCGCAGGCTTCCTACGTGGGATGTGTATGCTATGCTTTGCTGTCACTGGAAGGTCCTCCAGCATATTTGACAATAATCACCAGGATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGTTCTTCCCTGTCTCTaGCTCTTTCCCGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLVLPCL*LFPGLH
Trigger: ATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAAC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCTCTTCCATAGCTTCTaGCTGAGCTGCTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRLFHSF*LSCCER
Trigger: GCGCTCACAGCAGCTCAGCAAGAAGCTATGGAAGAG...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACCTCTTCCATAGCTTCTaGCTGAGCTGCTGTGAGCGC +
Preference number: 5 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYLFHSF*LSCCER
Trigger: GCGCTCACAGCAGCTCAGCAAGAAGCTATGGAAGAG...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCAGTCACCATTCCTGTaGTCTCCGCTGGAACTCTGT +
Preference number: 5 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRQSPFL*SPLELC
Trigger: ACAGAGTTCCAGCGGAGACAACAGGAATGGTGACTG...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCAGTCACCATTCCTGTaGTCTCCGCTGGAACTCTGT +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVQSPFL*SPLELC
Trigger: ACAGAGTTCCAGCGGAGACAACAGGAATGGTGACTG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp GGGTTCTGGAATTTTCCTTTGAGACTTGAAGACTGGTTATCCACGTaGCCCGGAGTCTGTGCAAAGTCCTGGATGAATGTGGCCAGTAAA +
Preference number: 5 (lower is better)
Translates to: GFWNFPLRLEDWLST*PGVCAKSWMNVASK
Trigger: TTTACTGGCCACATTCATCCAGGACTTTGCACAGACTCCGGGTCACGTGGATAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTAAGCTATCAAGTTTCTaGCGGTACGACCCTCCTCAG +
Preference number: 5 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRKLSSF*RYDPPQ
Trigger: CTGAGGAGGGTCGTACCGCAAGAAACTTGATAGCTT...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCTTCTCTTGCCTCTGTaGCTCAATTCGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPLLLPL*LNSGFL
Trigger: CAAGAAGCCCGAATTGAGCAACAGAGGCAAGAGAAG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GTGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACCTTCTCTTGCCTCTGTaGCTCAATTCGGGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: VHITGCIQRHGHPHCFFYLLLPL*LNSGFL
Trigger: CAAGAAGCCCGAATTGAGCAACAGAGGCAAGAGAAG...GTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCGGCTGGAGTCACTACTaGAAGGATGTTTTCAAGGGC +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLGWSHY*KDVFKG
Trigger: GCCCTTGAAAACATCCTTCAAGTAGTGACTCCAGCC...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTACTGCCCGGCGAAGATaGTCAAAAAGAAATGCCCAG +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTTARRR*SKRNAQ
Trigger: CTGGGCATTTCTTTTTGACAATCTTCGCCGGGCAGT...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCAAAGCTGTGGTGTTTaGTGGAGCAACACATACTGC +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPQSCGV*WSNTYC
Trigger: GCAGTATGTGTTGCTCCACAAAACACCACAGCTTTG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGCTGGAACTCTGTCTGTaGGCAAAGCTGTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLELCL*AKLWCF
Trigger: AAAACACCACAGCTTTGCCAACAGACAGAGTTCCAG...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCTGGAACTCTGTCTGTaGGCAAAGCTGTGGTGTTTT +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPLELCL*AKLWCF
Trigger: AAAACACCACAGCTTTGCCAACAGACAGAGTTCCAG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCAGCAGCACTCACATTaGAAATGTCTGAAGGGTCCG +
Preference number: 5 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVQQHSH*KCLKGP
Trigger: CGGACCCTTCAGACATTTCAAATGTGAGTGCTGCTG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000037408.9
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCAGCTTTCTCCTTCTCTaGCCTCTGTTGCTCAATTCG +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLSFLLL*PLLLNS
Trigger: CGAATTGAGCAACAGAGGCAAGAGAAGGAGAAAGCT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGCGATGGCTTCTTCATaGGCCTTTTCTAGACGATCT +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTAMASS*AFSRRS
Trigger: AGATCGTCTAGAAAAGGCCAATGAAGAAGCCATCGC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTGCGATGGCTTCTTCATaGGCCTTTTCTAGACGATCT +
Preference number: 5 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVAMASS*AFSRRS
Trigger: AGATCGTCTAGAAAAGGCCAATGAAGAAGCCATCGC...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTAGCCTCATCACGAGCTaGCTTTTCTTCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRSLITS*LFFLSS
Trigger: AGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGCT...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCTTTCCATCTGGTCGGTaGGCAATCAGACAGCTAAAA +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLFPSGR*AIRQLK
Trigger: TTTTAGCTGTCTGATTGCCAACCGACCAGATGGAAA...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTACTCTGAATGGCTACTaGGATGGTGTTCTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVTLNGY*DGVLGV
Trigger: TACACCCAGAACACCATCCAAGTAGCCATTCAGAGT...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTACTCTGAATGGCTACTaGGATGGTGTTCTGGGTGTA +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTTLNGY*DGVLGV
Trigger: TACACCCAGAACACCATCCAAGTAGCCATTCAGAGT...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAACACAGCTCATCTCTaGCTCCAGAATGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVNTAHL*LQNELV
Trigger: AACAAGCTCATTCTGGAGCAAGAGATGAGCTGTGTT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCAACACAGCTCATCTCTaGCTCCAGAATGAGCTTGTT +
Preference number: 5 (lower is better)
Translates to: AHHWLYSETWPPSLFLLLNTAHL*LQNELV
Trigger: AACAAGCTCATTCTGGAGCAAGAGATGAGCTGTGTT...GAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp GCGATTGTCCTTTTACGAGAAGGTGATGAAAGTTTTTCATGCATGTaGATTCCATGCCCTGGAAGTCTGGCAGGCTCCTCTTCTACAATA +
Preference number: 5 (lower is better)
Translates to: AIVLLREGDESFSCM*IPCPGSLAGSSSTI
Trigger: TATTGTAGAAGAGGAGCCTGCCAGACTTCCAGGGCATGGAATTCACATGCATGAAAAACTTTCATCACCTTCTCGTAAAAGGACAATCGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp CATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTCCAAGAGCCACTGTCTaGTACTTGAAGTTGTTTTAC +
Preference number: 5 (lower is better)
Translates to: HHWLYSETWPPSLFLLLRPRATV*YLKLFY
Trigger: GTAAAACAACTTCAAGTACAAGACAGTGGCTCTTGG...ACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGCCAAGAGCCACTGTCTaGTACTTGAAGTTGTTTTAC +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPPRATV*YLKLFY
Trigger: GTAAAACAACTTCAAGTACAAGACAGTGGCTCTTGG...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGAACATAAACCGTCAATaGGTGTATCAGGAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPNINRQ*VYQEVH
Trigger: ATGGACCTCCTGATACACCAATTGACGGTTTATGTT...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGATAGCTGATAAGGTCTaGCACTCGACTGTTAAAAGC +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVIADKV*HSTVKS
Trigger: GCTTTTAACAGTCGAGTGCAAGACCTTATCAGCTAT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGAGATTTTCCACCAGTTaGACATTTCGGTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVRFSTS*TFRFSI
Trigger: GATGGAAAACCGAAATGTCAAACTGGTGGAAAATCT...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGTTCTTCCCTGTCTCTaGCTCTTTCCCGGGCTGCAT +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKVLPCL*LFPGLH
Trigger: ATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAAC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTAATCTCTGAAGCTTaGCTTTATAAGGTGACTCGG +
Preference number: 5 (lower is better)
Translates to: ITGCIQRHGHPHCFFYSVLISEA*LYKVTR
Trigger: CCGAGTCACCTTATAAAGCAAAGCTTCAGAGATTAA...CACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp ACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGGCCACTGTCTTGTACTaGAAGTTGTTTTACAAGATC +
Preference number: 5 (lower is better)
Translates to: TSLAVFRDMATLIVSFTPATVLY*KLFYKI
Trigger: GATCTTGTAAAACAACTTCAAGTACAAGACAGTGGC...CGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp TTTCTCCAATATTCTAGCAATCTCACCAAGGGTCCGATCCAAAGCTaGAGCCTTATTATTTACCCAAGAGCCACTGTCTTGTACTTGAAG +
Preference number: 5 (lower is better)
Translates to: FLQYSSNLTKGPIQS*SLIIYPRATVLYLK
Trigger: CTTCAAGTACAAGACAGTGGCTCTTGGGTAAATAATAAGGCTTCAGCTTTGGATCGGACCCTTGGTGAGATTGCTAGAATATTGGAGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTTTAATCTCTGAAGCTTaGCTTTATAAGGTGACTCGG +
Preference number: 5 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVLISEA*LYKVTR
Trigger: CCGAGTCACCTTATAAAGCAAAGCTTCAGAGATTAA...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTGCCACTGTCTTGTACTaGAAGTTGTTTTACAAGATC +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTATVLY*KLFYKI
Trigger: GATCTTGTAAAACAACTTCAAGTACAAGACAGTGGC...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGAAGGAAACAGCACTTaGATGAGCCTCGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKEGNST*MSLGSL
Trigger: CAGTGACCCGAGGCTCATCAAAGTGCTGTTTCCTTC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAGAAGGAAACAGCACTTaGATGAGCCTCGGGTCACTG +
Preference number: 5 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVEGNST*MSLGSL
Trigger: CAGTGACCCGAGGCTCATCAAAGTGCTGTTTCCTTC...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGCACATCACTGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCATTCATTCTATCTGTaGATGGGCTTTGAATCACAT +
Preference number: 5 (lower is better)
Translates to: CTSLAVFRDMATLIVSFTHSFYL*MGFESH
Trigger: ATGTGATTCAAAGCCCATCAACAGATAGAATGAATG...AGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCAGTGATGTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp TGGCTGTATTCAGAGACATGGCCACCCTCATTGTTTCTTTTACTCCGTGTTGTTCATTCATTCTATCTGTaGATGGGCTTTGAATCACAT +
Preference number: 5 (lower is better)
Translates to: WLYSETWPPSLFLLLRVVHSFYL*MGFESH
Trigger: ATGTGATTCAAAGCCCATCAACAGATAGAATGAATG...AACAACACGGAGTAAAAGAAACAATGAGGGTGGCCATGTCTCTGAATACAGCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATTTCCGGGACGTCTTTaGCACTGTCATTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVFPGRL*HCHWCT
Trigger: TGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAA...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAATTTCCGGGACGTCTTTaGCACTGTCATTGGTGCACA +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKFPGRL*HCHWCT
Trigger: TGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAA...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAGAAGCGATCAGGACATaGCAGAGAGAACACTGCTTC +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKEAIRT*QREHCF
Trigger: GAAGCAGTGTTCTCTCTGCAATGTCCTGATCGCTTC...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAACAAAGCTGTGGTGTTTaGTGGAGCAACACATACTGC +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKQSCGV*WSNTYC
Trigger: GCAGTATGTGTTGCTCCACAAAACACCACAGCTTTG...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp TCACTGTCAATAGCTGGTATTTCAGAAGTATGCACTGAACTGTCTTaGCTACTACCAGAATTCTTGACATCATCCAATATACACACTGTG +
Preference number: 5 (lower is better)
Translates to: SLSIAGISEVCTELS*LLPEFLTSSNIHTV
Trigger: CACAGTGTGTATATTGGATGATGTCAAGAATTCTGGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAAATACCAGCTATTGACAGTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAAGCCTCATCACGAGCTaGCTTTTCTTCTTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVSLITS*LFFLSS
Trigger: AGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGCT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp ACATACTGCATCACTGTCAATAGCTGGTATTTCAGAAGTATGCACTaGACTGTCTTGACTACTACCAGAATTCTTGACATCATCCAATAT +
Preference number: 5 (lower is better)
Translates to: TYCITVNSWYFRSMH*TVLTTTRILDIIQY
Trigger: ATATTGGATGATGTCAAGAATTCTGGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAAATACCAGCTATTGACAGTGATGCAGTATGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTAAACATAAACCGTCAATaGGTGTATCAGGAGGTCCAT +
Preference number: 5 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVNINRQ*VYQEVH
Trigger: ATGGACCTCCTGATACACCAATTGACGGTTTATGTT...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS TCA 90 bp TCTTCTCTAACTTTTCCTGAAGTTGAATCCAGTCAATCAATGCTTTaGAATCTCTCACATAGTAATCCAGCATCATTAACACCTCCTTAC +
Preference number: 5 (lower is better)
Translates to: SSLTFPEVESSQSML*NLSHSNPASLTPPY
Trigger: GTAAGGAGGTGTTAATGATGCTGGATTACTATGTGAGAGATTTCAAAGCATTGATTGACTGGATTCAACTTCAGGAAAAGTTAGAGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS-3UTR CAA 90 bp GGCTTACTGAAAGTGTTAGTTACACAGGTCTCTAACTCCAAAGAAAAACTTAAAAGATTTTCCACCAGTTaGACATTTCGGTTTTCCATC +
Preference number: 5 (lower is better)
Translates to: GLLKVLVTQVSNSKEKLKRFSTS*TFRFSI
Trigger: GATGGAAAACCGAAATGTCAAACTGGTGGAAAATCT...TTTAAGTTTTTCTTTGGAGTTAGAGACCTGTGTAACTAACACTTTCAGTAAGCC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS-3UTR CAA 90 bp AAATATTATGCACAAAGGAAACAAACTCAATTTGCAAAGCTAGGAAGGCCAGTATTCTGGAATTTTCCTTaGAGACTTGAAGACTGGTTA +
Preference number: 5 (lower is better)
Translates to: KYYAQRKQTQFAKLGRPVFWNFP*RLEDWL
Trigger: TAACCAGTCTTCAAGTCTCAAAGGAAAATTCCAGAA...TACTGGCCTTCCTAGCTTTGCAAATTGAGTTTGTTTCCTTTGTGCATAATATTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
CDS CCA 72 bp ATGAGCCTCGGGTCACTGAAATACTGGAAAGGCAGCTaGCAGAGCTTCTGCAGCACCGTTGGGTGGCGGCCG +
Preference number: 6 (lower is better)
Translates to: MSLGSLKYWKGS*QSFCSTVGWRP
Trigger: CGGCCGCCACCCAACGGTGCTGCAGAAGCTCTGCCAGCTGCCTTTCCAGTATTTCAGTGACCCGAGGCTCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp GGATGGTGTTCTGGGTGTAACTGTCCTTGGGACTCGTaGCGGCGTCTGAGATGGTGCCGTGGAAGAGGATAC +
Preference number: 6 (lower is better)
Translates to: GWCSGCNCPWDS*RRLRWCRGRGY
Trigger: GTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAGAACACCATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 90 bp ATCCCACGTAGGAAGCCTGCGGCGTGCTGCAGAAATGTGGCCATTTaGGGATTCTCATCCACTGGGCCTTGCACTGAGAGGAAGCAGCCA +
Preference number: 6 (lower is better)
Translates to: IPRRKPAACCRNVAI*GFSSTGPCTERKQP
Trigger: TGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCTACGTGGGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp CTGGGTGTAACTGTCCTTGGGACTCGTGCCGGCGTCTaGGATGGTGCCGTGGAAGAGGATACAGTAGAGCAT +
Preference number: 6 (lower is better)
Translates to: LGVTVLGTRAGV*DGAVEEDTVEH
Trigger: ATGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACACCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 72 bp TCCCACGTAGGAAGCCTGCGGCGTGCTGCAGAAATGTaGCCATTTTGGGATTCTCATCCACTGGGCCTTGCA +
Preference number: 6 (lower is better)
Translates to: SHVGSLRRAAEM*PFWDSHPLGLA
Trigger: TGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCTACGTGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp CTCTTCCATAGCTTCTTGCTGAGCTGCTGTGAGCGCTaGCAACCGTTCTTCCCTGTCTCTTGCTCTTTCCCG +
Preference number: 6 (lower is better)
Translates to: LFHSFLLSCCER*QPFFPVSCSFP
Trigger: CGGGAAAGAGCAAGAGACAGGGAAGAACGGTTGGCAGCGCTCACAGCAGCTCAGCAAGAAGCTATGGAAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp GGCCATTTTGGGATTCTCATCCACTGGGCCTTGCACTaGGAGGAAGCAGCCATGCAGTCTGTCAATCAGACC +
Preference number: 6 (lower is better)
Translates to: GHFGILIHWALH*EEAAMQSVNQT
Trigger: GGTCTGATTGACAGACTGCATGGCTGCTTCCTCTCAGTGCAAGGCCCAGTGGATGAGAATCCCAAAATGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp CAACCGTTCTTCCCTGTCTCTTGCTCTTTCCCGGGCTaGATCTTCACGAGCTTTCTCCTTCTCTTGCCTCTG +
Preference number: 6 (lower is better)
Translates to: QPFFPVSCSFPG*IFTSFLLLLPL
Trigger: CAGAGGCAAGAGAAGGAGAAAGCTCGTGAAGATGCAGCCCGGGAAAGAGCAAGAGACAGGGAAGAACGGTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 72 bp CCGTTCATTTTTCCGGGACGTCTTTTGCACTGTCATTaGTGCACAGGATTGAGCAGGTGTGGCCTCAGGAGG +
Preference number: 6 (lower is better)
Translates to: PFIFPGRLLHCH*CTGLSRCGLRR
Trigger: CCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp AACCAGTATGATGAGCCTTTACCTTGTCAGCCCAACTaGCACCTGTGGGAGCCAGACATGGGGCAGTTACTG +
Preference number: 6 (lower is better)
Translates to: NQYDEPLPCQPN*HLWEPDMGQLL
Trigger: CAGTAACTGCCCCATGTCTGGCTCCCACAGGTGTCAGTTGGGCTGACAAGGTAAAGGCTCATCATACTGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp TTCATTTTTCCGGGACGTCTTTTGCACTGTCATTGGTaGACAGGATTGAGCAGGTGTGGCCTCAGGAGGAGC +
Preference number: 6 (lower is better)
Translates to: FIFPGRLLHCHW*TGLSRCGLRRS
Trigger: GCTCCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp GCCTGCCTTTCTGCCTCCAAGGCTCTCTTACGTTCCTaGACAGCCTCATCACGAGCTTGCTTTTCTTCTTGT +
Preference number: 6 (lower is better)
Translates to: ACLSASKALLRS*TASSRACFSSC
Trigger: ACAAGAAGAAAAGCAAGCTCGTGATGAGGCTGTGCAGGAACGTAAGAGAGCCTTGGAGGCAGAAAGGCAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS GCA 72 bp CATAGCATACACATCCCACGTAGGAAGCCTGCGGCGTaGTGCAGAAATGTGGCCATTTTGGGATTCTCATCC +
Preference number: 6 (lower is better)
Translates to: HSIHIPRRKPAA*CRNVAILGFSS
Trigger: GGATGAGAATCCCAAAATGGCCACATTTCTGCAGCACGCCGCAGGCTTCCTACGTGGGATGTGTATGCTATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp AACTGTCCTTGGGACTCGTGCCGGCGTCTGAGATGGTaGCGTGGAAGAGGATACAGTAGAGCATATGTAGAA +
Preference number: 6 (lower is better)
Translates to: NCPWDSCRRLRW*RGRGYSRAYVE
Trigger: TTCTACATATGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp GCTAGCCATGTGCCGGAATGCAAGGGACAAGCCCTCTaGCCCTACAACAGACTGAAAAGCAGACAAATCAAG +
Preference number: 6 (lower is better)
Translates to: ASHVPECKGQAL*PYNRLKSRQIK
Trigger: CTTGATTTGTCTGCTTTTCAGTCTGTTGTAGGGGCAGAGGGCTTGTCCCTTGCATTCCGGCACATGGCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 72 bp TGTAACTGTCCTTGGGACTCGTGCCGGCGTCTGAGATaGTGCCGTGGAAGAGGATACAGTAGAGCATATGTA +
Preference number: 6 (lower is better)
Translates to: CNCPWDSCRRLR*CRGRGYSRAYV
Trigger: TACATATGCTCTACTGTATCCTCTTCCACGGCACCATCTCAGACGCCGGCACGAGTCCCAAGGACAGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 72 bp TCCGTTCATTTTTCCGGGACGTCTTTTGCACTGTCATaGGTGCACAGGATTGAGCAGGTGTGGCCTCAGGAG +
Preference number: 6 (lower is better)
Translates to: SVHFSGTSFALS*VHRIEQVWPQE
Trigger: CTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 90 bp CAGCATCTTTCCGTTCATTTTTCCGGGACGTCTTTTGCACTGTCATaGGTGCACAGGATTGAGCAGGTGTGGCCTCAGGAGGAGCAGAAC +
Preference number: 6 (lower is better)
Translates to: QHLSVHFSGTSFALS*VHRIEQVWPQEEQN
Trigger: GTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGGAAAGATGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 90 bp TTCATTTTTCCGGGACGTCTTTTGCACTGTCATTGGTGCACAGGATaGAGCAGGTGTGGCCTCAGGAGGAGCAGAACCAGTATGATGAGC +
Preference number: 6 (lower is better)
Translates to: FIFPGRLLHCHWCTG*SRCGLRRSRTSMMS
Trigger: GCTCATCATACTGGTTCTGCTCCTCCTGAGGCCACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 72 bp GTCCGTCATCTCAGTCACCATTCCTGTTGTCTCCGCTaGAACTCTGTCTGTTGGCAAAGCTGTGGTGTTTTG +
Preference number: 6 (lower is better)
Translates to: VRHLSHHSCCLR*NSVCWQSCGVL
Trigger: CAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCGGAGACAACAGGAATGGTGACTGAGATGACGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS GCA 72 bp AGTCCAGAGACACACCACAGAAAGATAGACTCCCACTaGCCATACTGGCAGAAAAGTCACTGTCGTTGTCAG +
Preference number: 6 (lower is better)
Translates to: SPETHHRKIDSH*PYWQKSHCRCQ
Trigger: CTGACAACGACAGTGACTTTTCTGCCAGTATGGGCAGTGGGAGTCTATCTTTCTGTGGTGTGTCTCTGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 72 bp CACCATTCCTGTTGTCTCCGCTGGAACTCTGTCTGTTaGCAAAGCTGTGGTGTTTTGTGGAGCAACACATAC +
Preference number: 6 (lower is better)
Translates to: HHSCCLRWNSVC*QSCGVLWSNTY
Trigger: GTATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCGGAGACAACAGGAATGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 72 bp TTGTCTCCGCTGGAACTCTGTCTGTTGGCAAAGCTGTaGTGTTTTGTGGAGCAACACATACTGCATCACTGT +
Preference number: 6 (lower is better)
Translates to: LSPLELCLLAKL*CFVEQHILHHC
Trigger: ACAGTGATGCAGTATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCGGAGACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 72 bp GTTTTTCATGCATGTGAATTCCATGCCCTGGAAGTCTaGCAGGCTCCTCTTCTACAATATCTCCCCAGGATG +
Preference number: 6 (lower is better)
Translates to: VFHACEFHALEV*QAPLLQYLPRM
Trigger: CATCCTGGGGAGATATTGTAGAAGAGGAGCCTGCCAGACTTCCAGGGCATGGAATTCACATGCATGAAAAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 72 bp CTCAGCATCTTTCCGTTCATTTTTCCGGGACGTCTTTaGCACTGTCATTGGTGCACAGGATTGAGCAGGTGT +
Preference number: 6 (lower is better)
Translates to: LSIFPFIFPGRL*HCHWCTGLSRC
Trigger: ACACCTGCTCAATCCTGTGCACCAATGACAGTGCAAAAGACGTCCCGGAAAAATGAACGGAAAGATGCTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 72 bp CGCTGGAACTCTGTCTGTTGGCAAAGCTGTGGTGTTTaGTGGAGCAACACATACTGCATCACTGTCAATAGC +
Preference number: 6 (lower is better)
Translates to: RWNSVCWQSCGV*WSNTYCITVNS
Trigger: GCTATTGACAGTGATGCAGTATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 72 bp TCACCATTCCTGTTGTCTCCGCTGGAACTCTGTCTGTaGGCAAAGCTGTGGTGTTTTGTGGAGCAACACATA +
Preference number: 6 (lower is better)
Translates to: SPFLLSPLELCL*AKLWCFVEQHI
Trigger: TATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCGGAGACAACAGGAATGGTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 90 bp TGCCTCCAAGGCTCTCTTACGTTCCTGCACAGCCTCATCACGAGCTaGCTTTTCTTCTTGTCTTCTCTGACGTTCTTCCTGCAATTCATT +
Preference number: 6 (lower is better)
Translates to: CLQGSLTFLHSLITS*LFFLSSLTFFLQFI
Trigger: AATGAATTGCAGGAAGAACGTCAGAGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGCTGTGCAGGAACGTAAGAGAGCCTTGGAGGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 90 bp GTTGATATTTTTGGTGTAGCTGGACGGCTGTTTCCATCTGGTCGGTaGGCAATCAGACAGCTAAAAACCACAGCACCAGCTCTGAGAAGT +
Preference number: 6 (lower is better)
Translates to: VDIFGVAGRLFPSGR*AIRQLKTTAPALRS
Trigger: ACTTCTCAGAGCTGGTGCTGTGGTTTTTAGCTGTCTGATTGCCAACCGACCAGATGGAAACAGCCGTCCAGCTACACCAAAAATATCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 90 bp TGTTGTCTCCGCTGGAACTCTGTCTGTTGGCAAAGCTGTGGTGTTTaGTGGAGCAACACATACTGCATCACTGTCAATAGCTGGTATTTC +
Preference number: 6 (lower is better)
Translates to: CCLRWNSVCWQSCGV*WSNTYCITVNSWYF
Trigger: GAAATACCAGCTATTGACAGTGATGCAGTATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCAGCGGAGACAACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 90 bp TCTCTTACGTTCCTGCACAGCCTCATCACGAGCTTGCTTTTCTTCTaGTCTTCTCTGACGTTCTTCCTGCAATTCATTAAGCCTCTGCTC +
Preference number: 6 (lower is better)
Translates to: SLTFLHSLITSLLFF*SSLTFFLQFIKPLL
Trigger: GAGCAGAGGCTTAATGAATTGCAGGAAGAACGTCAGAGAAGACAAGAAGAAAAGCAAGCTCGTGATGAGGCTGTGCAGGAACGTAAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CCA 72 bp TGGAACTCTGTCTGTTGGCAAAGCTGTGGTGTTTTGTaGAGCAACACATACTGCATCACTGTCAATAGCTGG +
Preference number: 6 (lower is better)
Translates to: WNSVCWQSCGVL*SNTYCITVNSW
Trigger: CCAGCTATTGACAGTGATGCAGTATGTGTTGCTCCACAAAACACCACAGCTTTGCCAACAGACAGAGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp CTTTTACGAGAAGGTGATGAAAGTTTTTCATGCATGTaGATTCCATGCCCTGGAAGTCTGGCAGGCTCCTCT +
Preference number: 6 (lower is better)
Translates to: LLREGDESFSCM*IPCPGSLAGSS
Trigger: AGAGGAGCCTGCCAGACTTCCAGGGCATGGAATTCACATGCATGAAAAACTTTCATCACCTTCTCGTAAAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp GGTGATTATTGTCAAATATGCTGGAGGACCTTCCAGTaGCAGCAAAGCATAGCATACACATCCCACGTAGGA +
Preference number: 6 (lower is better)
Translates to: GDYCQICWRTFQ*QQSIAYTSHVG
Trigger: TCCTACGTGGGATGTGTATGCTATGCTTTGCTGTCACTGGAAGGTCCTCCAGCATATTTGACAATAATCACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp AATTTTCCTTTGAGACTTGAAGACTGGTTATCCACGTaGCCCGGAGTCTGTGCAAAGTCCTGGATGAATGTG +
Preference number: 6 (lower is better)
Translates to: NFPLRLEDWLST*PGVCAKSWMNV
Trigger: CACATTCATCCAGGACTTTGCACAGACTCCGGGTCACGTGGATAACCAGTCTTCAAGTCTCAAAGGAAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 72 bp TGCTTTCTAGTGGAACACTCCAAGCTATCAAGTTTCTaGCGGTACGACCCTCCTCAGCAACAATTCTTCTCA +
Preference number: 6 (lower is better)
Translates to: CFLVEHSKLSSF*RYDPPQQQFFS
Trigger: TGAGAAGAATTGTTGCTGAGGAGGGTCGTACCGCAAGAAACTTGATAGCTTGGAGTGTTCCACTAGAAAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp TATTCTAGCAATCTCACCAAGGGTCCGATCCAAAGCTaGAGCCTTATTATTTACCCAAGAGCCACTGTCTTG +
Preference number: 6 (lower is better)
Translates to: YSSNLTKGPIQS*SLIIYPRATVL
Trigger: CAAGACAGTGGCTCTTGGGTAAATAATAAGGCTTCAGCTTTGGATCGGACCCTTGGTGAGATTGCTAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 72 bp TCTTCTTCAGCAATAGCACTGGCGATGGCTTCTTCATaGGCCTTTTCTAGACGATCTGCTAGCTCTTCTTTT +
Preference number: 6 (lower is better)
Translates to: SSSAIALAMASS*AFSRRSASSSF
Trigger: AAAAGAAGAGCTAGCAGATCGTCTAGAAAAGGCCAATGAAGAAGCCATCGCCAGTGCTATTGCTGAAGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS CAA 90 bp CATCATCTTTGCTTTCTAGTGGAACACTCCAAGCTATCAAGTTTCTaGCGGTACGACCCTCCTCAGCAACAATTCTTCTCACTTTGTCAT +
Preference number: 6 (lower is better)
Translates to: HHLCFLVEHSKLSSF*RYDPPQQQFFSLCH
Trigger: ATGACAAAGTGAGAAGAATTGTTGCTGAGGAGGGTCGTACCGCAAGAAACTTGATAGCTTGGAGTGTTCCACTAGAAAGCAAAGATGATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS GCA 72 bp TGGCAAAGCTGTGGTGTTTTGTGGAGCAACACATACTaGATCACTGTCAATAGCTGGTATTTCAGAAGTATG +
Preference number: 6 (lower is better)
Translates to: WQSCGVLWSNTY*ITVNSWYFRSM
Trigger: CATACTTCTGAAATACCAGCTATTGACAGTGATGCAGTATGTGTTGCTCCACAAAACACCACAGCTTTGCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS GCA 72 bp CCGTTCTTCTCCATCTTTTACAGGCTCTGGTGGAGCTaGACTTTCAATCACAATGTCAACAACATACTTCTT +
Preference number: 6 (lower is better)
Translates to: PFFSIFYRLWWS*TFNHNVNNILL
Trigger: AAGAAGTATGTTGTTGACATTGTGATTGAAAGTGCAGCTCCACCAGAGCCTGTAAAAGATGGAGAAGAACGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp CACTTTCGGACATCTTTCTCCCTTTCTAACAACTTTTaGAGCTTTAGTGTCTTCTCTTCGCGTAGCTTTTCC +
Preference number: 6 (lower is better)
Translates to: HFRTSFSLSNNF*SFSVFSSRSFS
Trigger: GGAAAAGCTACGCGAAGAGAAGACACTAAAGCTTCAAAAGTTGTTAGAAAGGGAGAAAGATGTCCGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp TTCTACAATATCTCCCCAGGATGTATTTTGACGCCATaGTTCACGAGCTTCATAATCTGCGAGAACATCATT +
Preference number: 6 (lower is better)
Translates to: FYNISPGCILTP*FTSFIICENII
Trigger: AATGATGTTCTCGCAGATTATGAAGCTCGTGAATCATGGCGTCAAAATACATCCTGGGGAGATATTGTAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp GAATTCTTGACATCATCCAATATACACACTGTGAACTaGGTTCTCTCAGAAAGAGGATGGTCAGAAGAATGT +
Preference number: 6 (lower is better)
Translates to: EFLTSSNIHTVN*VLSERGWSEEC
Trigger: ACATTCTTCTGACCATCCTCTTTCTGAGAGAACTCAGTTCACAGTGTGTATATTGGATGATGTCAAGAATTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp ATCACTGTCAATAGCTGGTATTTCAGAAGTATGCACTaGACTGTCTTGACTACTACCAGAATTCTTGACATC +
Preference number: 6 (lower is better)
Translates to: ITVNSWYFRSMH*TVLTTTRILDI
Trigger: GATGTCAAGAATTCTGGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAAATACCAGCTATTGACAGTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp AATCTTGTTACTAAACAGAACATCAGTGCAGTTTTCTaGGCAGTTATTGCAGGCGAGGCTGTAAACATTGAT +
Preference number: 6 (lower is better)
Translates to: NLVTKQNISAVF*AVIAGEAVNID
Trigger: ATCAATGTTTACAGCCTCGCCTGCAATAACTGCTCAGAAAACTGCACTGATGTTCTGTTTAGTAACAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CAA 72 bp AATTGGTGTATCAGGAGGTCCATTAAGAAGGTAATCTaGTTACTAAACAGAACATCAGTGCAGTTTTCTGAG +
Preference number: 6 (lower is better)
Translates to: NWCIRRSIKKVI*LLNRTSVQFSE
Trigger: CTCAGAAAACTGCACTGATGTTCTGTTTAGTAACAAGATTACCTTCTTAATGGACCTCCTGATACACCAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS TCA 72 bp ATAGCTGGTATTTCAGAAGTATGCACTGAACTGTCTTaGCTACTACCAGAATTCTTGACATCATCCAATATA +
Preference number: 6 (lower is better)
Translates to: IAGISEVCTELS*LLPEFLTSSNI
Trigger: TATATTGGATGATGTCAAGAATTCTGGTAGTAGTCAAGACAGTTCAGTGCATACTTCTGAAATACCAGCTAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000217647.2
CDS TCA 72 bp ACTTTTCCTGAAGTTGAATCCAGTCAATCAATGCTTTaGAATCTCTCACATAGTAATCCAGCATCATTAACA +
Preference number: 6 (lower is better)
Translates to: TFPEVESSQSML*NLSHSNPASLT
Trigger: TGTTAATGATGCTGGATTACTATGTGAGAGATTTCAAAGCATTGATTGACTGGATTCAACTTCAGGAAAAGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2
CDS CCA 72 bp CACTGTCTTGTACTTGAAGTTGTTTTACAAGATCTTTaGTTAATCTCTGAAGCTTTGCTTTATAAGGTGACT +
Preference number: 6 (lower is better)
Translates to: HCLVLEVVLQDL*LISEALLYKVT
Trigger: AGTCACCTTATAAAGCAAAGCTTCAGAGATTAACCAAAGATCTTGTAAAACAACTTCAAGTACAAGACAGTG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000037408.9
ENSMUST00000214747.2
ENSMUST00000216595.2
ENSMUST00000217647.2