Pregenerated sensors for SCAP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032485Ensembl transcript IDs: ENSMUST00000098350.10, ENSMUST00000197630.3, ENSMUST00000198976.5
Found 236 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTGCCCCACCTTGGGATaGGGGAAAGGGAATAGCGTA | + |
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Preference number: 2 (lower is better) Translates to: VYYYSQETTVQSQLLPLVCPTLG*GKGNSV Trigger: TACGCTATTCCCTTTCCCCCATCCCAAGGTGGGGCA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| 3UTR-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACCCTGTGCCCCACCTTaGGATGGGGGAAAGGGAATA | + |
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Preference number: 2 (lower is better) Translates to: LLLQSGDNSSESAIASSLPCAPP*DGGKGI Trigger: TATTCCCTTTCCCCCATCCCAAGGTGGGGCACAGGG...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| 3UTR GCA 72 bp | GCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTaGCCCACCTTGGGATGGGGGAAAGGGAATAGCGTA | + |
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Preference number: 3 (lower is better) Translates to: ASSLGPKSCYPL*PTLGWGKGNSV Trigger: TACGCTATTCCCTTTCCCCCATCCCAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTGGGGTGCAGCAGCATaGGCCGGGCACGTAGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTWGAAA*AGHVGC Trigger: GCAGCCTACGTGCCCGGCTCATGCTGCTGCACCCCA...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGGCTCCGGAGTTTCCTaGGGCCTGGCAGCAGGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTGSGVS*GLAAGL Trigger: CAGACCTGCTGCCAGGCCTCAGGAAACTCCGGAGCC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGTGGGGCCCAGGCACTaGGACCATCCTGAGGGTGTC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLVGPRH*DHPEGV Trigger: GACACCCTCAGGATGGTCGCAGTGCCTGGGCCCCAC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCTCGGAGGCTGCAGTTaGGGCTGGGGTGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLLGGCS*GWGAAA Trigger: TGCTGCTGCACCCCAGCCCCAACTGCAGCCTCCGAG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGCCTCCCCACGGGCTTaGCTGAGGGCAGGCAGGATT | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLASPRA*LRAGRI Trigger: AATCCTGCCTGCCCTCAGCCAAGCCCGTGGGGAGGC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGAATGCAGGGTCCGGGTaGCTGGCAGGCAGCACTCCG | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLNAGSG*LAGSTP Trigger: CGGAGTGCTGCCTGCCAGCCACCCGGACCCTGCATT...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGGGCTGAGTGGGCTCTaGGGGCAGCTGCACCGAGAA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTGLSGL*GQLHRE Trigger: TTCTCGGTGCAGCTGCCCCCAGAGCCCACTCAGCCC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGCAGTCCCCTCTTCTTaGGAGGCCTGGGGCAAGGGA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTAVPSS*EAWGKG Trigger: TCCCTTGCCCCAGGCCTCTCAAGAAGAGGGGACTGC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGTAGGTGCGCAGCCCTaGCGGGTCGGTGTATACCAG | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTVGAQP*RVGVYQ Trigger: CTGGTATACACCGACCCGGCAGGGCTGCGCACCTAC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGGGGTCCCTCTGAACTaGAGGGGGCTGAGGGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTGVPLN*RGLREV Trigger: CACTTCCCTCAGCCCCCTGCAGTTCAGAGGGACCCC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGGGGCTCGGCTGTCATaGACACCCTCTGCTGGACCA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTGARLS*TPSAGP Trigger: TGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTCCCACACGCAGACTTaGCCTGCCAGGCAGCAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLSHTQT*PARQQL Trigger: GAGCTGCTGCCTGGCAGGCCAAGTCTGCGTGTGGGA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTCTGCTGGACCAGCATaGTCAGGCAGCTCACCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLSAGPA*SGSSPG Trigger: GCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGGCTCTCCTTGTTTGTaGTCAGAGTCCGCAGGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLGSPCL*SESAGG Trigger: CCCGCCTGCGGACTCTGACCACAAACAAGGAGAGCC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGGAACCCTCACCCAGTaGGCTCTGCTCTGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLGTLTQ*ALLCHL Trigger: CAGGTGACAGAGCAGAGCCCACTGGGTGAGGGTTCC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCAGGCTCTTGGTCCCTaGGCTGTCTCTCAGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLQALGP*AVSQHM Trigger: CATGTGCTGAGAGACAGCTCAGGGACCAAGAGCCTG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGGCCCCACTTGGACTTaGCCATGTCGATCTTGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLGPTWT*PCRSCV Trigger: CACGCAAGATCGACATGGTCAAGTCCAAGTGGGGCC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCAGCAGGTCTGTCACCTaGAGGCAAACCTCCTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTSRSVT*RQTSSR Trigger: CCTGGAGGAGGTTTGCCTGCAGGTGACAGACCTGCT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCTGTCTCTCATATCGTaGTGGCCTCCCCACGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTLSLIS*WPPHGL Trigger: AAGCCCGTGGGGAGGCCAGCACGATATGAGAGACAG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTCCTGGTACACACGCTaGACCAGGCGGCTGAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLSWYTR*TRRLKS Trigger: TGACTTCAGCCGCCTGGTGCAGCGTGTGTACCAGGA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCCTCCTCCAGGCTCTTaGTCCCTGAGCTGTCTCTCA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTPPPGS*SLSCLS Trigger: TGAGAGACAGCTCAGGGACCAAGAGCCTGGAGGAGG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTGCCGAGGCTCGGGCTaGGTGGGCTCTGGGGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVCRGSG*VGSGGS Trigger: GCTGCCCCCAGAGCCCACTCAGCCCGAGCCTCGGCA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGCTGCTGTACACAGATaGGGAAGGAGAACTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLAAVHR*GRRTAS Trigger: CGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGAGCTGTGATTGCCCCTaGGTGGCCCTTCAGGGTAAA | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLSCDCP*VALQGK Trigger: TTTACCCTGAAGGGCCACTCAGGGGCAATCACAGCT...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCACATACCACTCTGGCTaGTCGCTGGGCTCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTTYHSG*SLGSPC Trigger: ACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGGAGCCCTTCTCAGGTaGAGTCCCCTCTTCTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTGALLR*SPLFLR Trigger: TCTCAAGAAGAGGGGACTGCACCTGAGAAGGGCTCC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTCCAACACCAAAATCTaGCGGGCAGGCTGGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTSNTKI*RAGWAS Trigger: TGAAGCCCAGCCTGCCCGGCAGATTTTGGTGTTGGA...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCAACCCTTCACAGGCGTaGAGAATTCCACAGGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTNPSQA*RIPQVP Trigger: CGGGACCTGTGGAATTCTCCACGCCTGTGAAGGGTT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCAATGTGATGGTGTGTaGCGTGGATGGCCGTACAGC | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTQCDGV*RGWPYS Trigger: GCTGTACGGCCATCCACGCCACACACCATCACATTG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCATCCCACAGGCAGATaGCTCCATCTTGTCCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLHPTGR*LHLVLH Trigger: GTGGAGGACAAGATGGAGCCATCTGCCTGTGGGATG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTGCCAATCTCCTCTTTaGAGTGGACGTGGACCAGGT | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLCQSPL*SGRGPG Trigger: ACCTGGTCCACGTCCACTTCAAAGAGGAGATTGGCA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGCACATACACTAGGCTaGGCTCACTGCCAAAGTTGC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLAHTLG*AHCQSC Trigger: GCAACTTTGGCAGTGAGCTCAGCCTAGTGTATGTGC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGGGAATTGGATAGGATaGGCAGAGCAGCCCATGGTT | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLGNWIG*AEQPMV Trigger: AACCATGGGCTGCTCTGCGCATCCTATCCAATTCCC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCTCTCCCAATCATTCTaGCAGAAGTTCCCAGGGGAC | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTLSQSF*QKFPGD Trigger: GTCCCCTGGGAACTTCTGGCAGAATGATTGGGAGAG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCTGTCTCTCAGCACATaGTTCCGGATCTCTTCCACC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLLSLST*FRISST Trigger: GGTGGAAGAGATCCGGAACCATGTGCTGAGAGACAG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCGCCATGATGAGGCGCTaGGCCAGGCGAGTGCGGGCC | + |
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Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVAMMRR*ARRVRA Trigger: GGCCCGCACTCGCCTGGCCCAGCGCCTCATCATGGC...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGAAGAGTGTGGGCCAGTaGCGGAAGGACAATTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLKSVGQ*RKDNFL Trigger: GAGGAAATTGTCCTTCCGCCACTGGCCCACACTCTT...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGGTCCAGGGGAGGGTaGGCGCAGGGCCGGCATGCG | + |
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Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLRSRGG*AQGRHA Trigger: CGCATGCCGGCCCTGCGCCCACCCTCCCCTGGACCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCCCCACGGGCTTGGCTaGGGGCAGGCAGGATTCAGG | + |
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Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVPHGLG*GQAGFR Trigger: CCTGAATCCTGCCTGCCCTCAGCCAAGCCCGTGGGG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR TCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCACCAGAAGGTTATCTaGGATGACACCCAAGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTHQKVI*DDTQAC Trigger: GCAAGCTTGGGTGTCATCTCAGATAACCTTCTGGTG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCGGTGTATACCAGGATaGCAATCCAGACAACGGTAC | + |
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Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLRCIPG*QSRQRY Trigger: GTACCGTTGTCTGGATTGGCATCCTGGTATACACCG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGGGCAGCAAGGTAGGTaGGCAGCCCTGCCGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLGQQGR*AALPGR Trigger: CCGACCCGGCAGGGCTGCGCACCTACCTTGCTGCCC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGACAGGTCACTGTGTTaGTGCTGCTGTACACAGATG | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTDRSLC*CCCTQM Trigger: CATCTGTGTACAGCAGCAGCAACACAGTGACCTGTC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCATCTTGTCCTCCACTaGCCAGTACCATGGTCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTHLVLH*PVPWSD Trigger: ATCAGACCATGGTACTGGCCAGTGGAGGACAAGATG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCCAGGGAGACACCGATaGCTTCACAAATATCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLPGRHR*LHKYLL Trigger: CAACAGATATTTGTGAAGTCATCGGTGTCTCCCTGG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCGCTCACTGCCAAAGTTaGAGACAATGGCAGCATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTAHCQS*RQWQHC Trigger: ACAATGCTGCCATTGTCTGCAACTTTGGCAGTGAGC...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCATCTCCTCTTTGAAGTaGACGTGGACCAGGTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SAIASSLGPKSCYPLCPTISSLK*TWTRFS Trigger: AGAGAACCTGGTCCACGTCCACTTCAAAGAGGAGAT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATGGAACCGGCTGTGCTaGGGGTCCAGGCCAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLWNRLC*GSRPGE Trigger: CTCCCCTGGCCTGGACCCCCAGCACAGCCGGTTCCA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCAGGCAGTCCCCTGTCTaGGCGTCCCACACGCAGACT | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVRQSPV*ASHTQT Trigger: AGTCTGCGTGTGGGACGCTCAGACAGGGGACTGCCT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACTGTGACCACGGCTaGCAGGGCGAGGCCCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVYCDHG*QGEAPL Trigger: AAGTGGGGCCTCGCCCTGGCAGCCGTGGTCACAGTA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCTCCGTCTCGGGCGGTaGGTAGCCGTAGTCATCGCA | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVLRLGR*VAVVIA Trigger: TGCGATGACTACGGCTACGCACCGCCCGAGACGGAG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGATGGAACCGGCTGTaGTGGGGGTCCAGGCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLRWNRL*WGSRPG Trigger: CCCTGGCCTGGACCCCCAGCACAGCCGGTTCCATCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTGTCGATCTTGCGTGTaGAGAAGTAGATGTAGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLCRSCV*RSRCRQ Trigger: TTGCCTACATCTACTTCTCCACACGCAAGATCGACA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCAAAGTTGCAGACAATaGCAGCATTGTCCAACACCA | + |
|
Preference number: 4 (lower is better) Translates to: AIASSLGPKSCYPLCPTLQSCRQ*QHCPTP Trigger: TGGTGTTGGACAATGCTGCCATTGTCTGCAACTTTG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCAGCTCTCAGGGCTGTaGTGGGCTTCTGGTGTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVQLSGL*WASGVH Trigger: GTGCACACCAGAAGCCCATCACAGCCCTGAGAGCTG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATCTCTGCTCGGAGGCTaGAGTTGGGGCTGGGGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLSLLGG*SWGWGA Trigger: TGCACCCCAGCCCCAACTGCAGCCTCCGAGCAGAGA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCCCCCAAGTTACCTCTaGGGCTCGGCTGTCATGGAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVPPSYL*GSAVMD Trigger: GTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGAGCACCCCCTCAATaGCGTCCCACACCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLRAPPQ*RPTPPA Trigger: GGCTGGAGGTGTGGGACGCCATTGAGGGGGTGCTCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCAGAACTGCCTCGCCCTaGGGTCCCTCTGAACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVRTASP*GPSELQ Trigger: CTGCAGTTCAGAGGGACCCCAGGGCGAGGCAGTTCT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAAGGAGACACAGCCCTaGCCGCCGGTCACCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLKETQP*PPVTRR Trigger: CCTTCTGGTGACCGGCGGCCAGGGCTGTGTCTCCTT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCATCTGCCGGGCAGGCTaGGCTTCACTGTTCTTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVICRAG*ASLFLP Trigger: GGGCAAGAACAGTGAAGCCCAGCCTGCCCGGCAGAT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVAGRPG*WCRRPS Trigger: GGATGGTCTCCTACACCATCACCCTGGTCTTCCAGC...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGATCTCACCGCCATTaGGTGTGGGCGTCAGGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLRSHRH*VWASGR Trigger: TCGGCCTGACGCCCACACTCAATGGCGGTGAGATCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTGTCGATTAAGCAGGTaGGGTCGGGCTGGTCCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVCRLSR*GRAGPQ Trigger: TTGGGGACCAGCCCGACCTCACCTGCTTAATCGACA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATGGGAAGATGGAGAATaGAGGGTCCGGGTGGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLWEDGE*RVRVAG Trigger: GCCAGCCACCCGGACCCTGCATTCTCCATCTTCCCA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAATGAGGAAGGAGAACTaGCTCGCCCTGGGGTCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLMRKEN*LALGSL Trigger: GAGGGACCCCAGGGCGAGGCAGTTCTCCTTCCTCAT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCGAGTTTCCTGAGGCCTaGCAGCAGGTCTGTCACCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVEFPEA*QQVCHL Trigger: CAGGTGACAGACCTGCTGCCAGGCCTCAGGAAACTC...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTCGCCGCGTTCTTCATaGTGGACCAGCTCTCACTAC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVSPRSS*WTSSHY Trigger: GTAGTGAGAGCTGGTCCATCATGAAGAACGCGGCGA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCACTGTGTGGGTCCGATaGCAGGTCACTGTGTTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVTVWVR*QVTVLL Trigger: CAGCAACACAGTGACCTGTCATCGGACCCACACAGT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCAATGTACACAGCTGTaGTTGCCCCTGAGTGGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVQCTQL*LPLSGP Trigger: AGGGCCACTCAGGGGCAATCACAGCTGTGTACATTG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGAATGGAGTACAGCTTaGTGCCTGTGCTGCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLEWSTA*CLCCGP Trigger: GGGACCGCAGCACAGGCATCAAGCTGTACTCCATTC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGTCATGGACACCCTCTaGTGGACCAGCATGCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLVMDTL*WTSMLR Trigger: CCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGAC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGATGACACCCAAGCTTaGACCACAGCCCAGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLDDTQA*TTAQVL Trigger: CAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCACTCTGGCTGCTCGCTaGGCTCTCCTTGTTTGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVTLAAR*ALLVCG Trigger: ACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGCTGTGATGGGCTTCTaGTGTGCACAGGGCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLAVMGF*CAQGTV Trigger: CACAGTGCCCTGTGCACACCAGAAGCCCATCACAGC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGATGGATGGTCCCAATaGTGTCAGGGTCGGCATGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLDGWSQ*CQGRHG Trigger: TCCATGCCGACCCTGACATCATTGGGACCATCCATC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTGTAGGCAAACAGGATaGTGTAGGTGGTCACGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVCRQTG*CRWSRA Trigger: CGCTCGTGACCACCTACATCATCCTGTTTGCCTACA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGGGCCAGGAAGTAGATaGCACGCAGCCTTTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLGPGSR*HAAFWE Trigger: TTCCCAAAAGGCTGCGTGTCATCTACTTCCTGGCCC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAAGAGGCAGAACTCCTaGATAGCAGGCACGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLKRQNS*IAGTRV Trigger: CACCCTCGTGCCTGCTATCCAGGAGTTCTGCCTCTT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGTGATTGCCCCTGAGTaGCCCTTCAGGGTAAAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLVIAPE*PFRVKR Trigger: CCTCTTTACCCTGAAGGGCCACTCAGGGGCAATCAC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATCGACAGGACAGTGGTaGAGAACAGCATCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLSTGQW*RTASGG Trigger: TCCTCCAGATGCTGTTCTTCACCACTGTCCTGTCGA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCGGAAGGAAGATGGTTaGAATGTGATGGTGTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVRKEDG*NVMVCG Trigger: GCCACACACCATCACATTGCAACCATCTTCCTTCCG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACTTAGAGTATGGTCTTaGCTCCCTGTCACTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLLRVWS*LPVTRR Trigger: GCGCCTAGTGACAGGGAGCCAAGACCATACTCTAAG...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACACAGACATGAGCAGTaGGCTAAGTACTGTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLHRHEQ*AKYCDH Trigger: GTGGTCACAGTACTTAGCTCACTGCTCATGTCTGTG...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAAGATGGTTGCAATGTaGTGGTGTGTGGCGTGGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLKMVAM*WCVAWM Trigger: CATCCACGCCACACACCATCACATTGCAACCATCTT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGTAACATCTCCACGGTaGGCAAATGTTTGGCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLVTSPR*ANVWLT Trigger: GGTCAGCCAAACATTTGCTCACCGTGGAGATGTTAC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGAAGGTTATCTGAGATaGCACCCAAGCTTGCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLEGYLR*HPSLHH Trigger: GTGGTGCAAGCTTGGGTGTCATCTCAGATAACCTTC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGAGGATGATGGGAATTaGATAGGATGCGCAGAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLEDDGN*IGCAEQ Trigger: CTGCTCTGCGCATCCTATCCAATTCCCATCATCCTC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACAAGGTCTGGTTCTCTaGCAGTTTAGGAGCATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLQGLVL*QFRSIR Trigger: CCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTG...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAACGATGAGATTGCCTTaGAGCTCTAAGCTCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLTMRLP*SSKLQM Trigger: CATCTGGAGCTTAGAGCTGCAAGGCAATCTCATCGT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR GCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGGGCTTCACTGTTCTTaGCCAAGTAGACTGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLGLHCS*PSRLSV Trigger: TACAGACAGTCTACTTGGGCAAGAACAGTGAAGCCC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATTCACAAATATCTGTTaGATGTACGCCACGGGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLFTNIC*MYATGA Trigger: TGCCCCCGTGGCGTACATCCAACAGATATTTGTGAA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR TCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTACAAACAGCAAGTCTTTaGGTGTGGCTGATGTCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLQTASL*VWLMSV Trigger: TACAGACATCAGCCACACTCAAAGACTTGCTGTTTG...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCATGTCTGTAGAGTTTTaGGCTCATGTTGATGGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VYYYSQETTVQSQLLPLVMSVEF*AHVDGW Trigger: CCATCCATCAACATGAGCCCAAAACTCTACAGACAT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CCA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGTTTCGGAAGGAAGATaGTTGCAATGTGATGGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLQSGDNSSESAIASSLVSEGR*LQCDGV Trigger: CACACCATCACATTGCAACCATCTTCCTTCCGAAAC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | GTGCGTAGCCGTAGTCATCGCAGGGCAGCTCCCCGCGCCTCCGCCTaGCGGGGCCACCACCCGGCTGCCCATAATTACGCGGGCAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VRSRSHRRAAPRASA*RGHHPAAHNYAGRA Trigger: TGCTCTGCCCGCGTAATTATGGGCAGCCGGGTGGTGGCCCCGGCAGGCGGAGGCGCGGGGAGCTGCCCTGCGATGACTACGGCTACGCAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | GAGGTGACCTCGCAGCACCAGCGGCACTATCTCCGTCTCGGGCGGTaGGTAGCCGTAGTCATCGCAGGGCAGCTCCCCGCGCCTCCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EVTSQHQRHYLRLGR*VAVVIAGQLPAPPP Trigger: AGGCGGAGGCGCGGGGAGCTGCCCTGCGATGACTACGGCTACGCACCGCCCGAGACGGAGATAGTGCCGCTGGTGCTGCGAGGTCACCTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 90 bp | CGGCGTGGCCCTGGGCGTGGGATCCGTGTGAGGCAGTCCCCTGTCTaGGCGTCCCACACGCAGACTTGGCCTGCCAGGCAGCAGCTCACT | + |
|
Preference number: 5 (lower is better) Translates to: RRGPGRGIRVRQSPV*ASHTQTWPARQQLT Trigger: AGTGAGCTGCTGCCTGGCAGGCCAAGTCTGCGTGTGGGACGCTCAGACAGGGGACTGCCTCACACGGATCCCACGCCCAGGGCCACGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 90 bp | CACCTCCGCAGCTATCCCGGCGTGGCCCTGGGCGTGGGATCCGTGTaGGGCAGTCCCCTGTCTGAGCGTCCCACACGCAGACTTGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLRSYPGVALGVGSV*GSPLSERPTRRLGL Trigger: CAGGCCAAGTCTGCGTGTGGGACGCTCAGACAGGGGACTGCCTCACACGGATCCCACGCCCAGGGCCACGCCGGGATAGCTGCGGAGGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | TCCCTTAGGTCCGGACTCCCAGAGGCCAGCGGGCAAAGGCTCTTGTaGGGCCCAGGCACTGCGACCATCCTGAGGGTGTCGCCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLRSGLPEASGQRLL*GPGTATILRVSPLQ Trigger: CTGGAGGGGCGACACCCTCAGGATGGTCGCAGTGCCTGGGCCCCACAAGAGCCTTTGCCCGCTGGCCTCTGGGAGTCCGGACCTAAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 90 bp | GAGTCTCTAGAGCGGCCACAGCCCACCCGGTGCCGAGGCTCGGGCTaGGTGGGCTCTGGGGGCAGCTGCACCGAGAAGTTGGTGTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: ESLERPQPTRCRGSG*VGSGGSCTEKLVSI Trigger: AATCGACACCAACTTCTCGGTGCAGCTGCCCCCAGAGCCCACTCAGCCCGAGCCTCGGCACCGGGTGGGCTGTGGCCGCTCTAGAGACTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | CTCAAAAGCTCCACCTCCGCAGCTATCCCGGCGTGGCCCTGGGCGTaGGATCCGTGTGAGGCAGTCCCCTGTCTGAGCGTCCCACACGCA | + |
|
Preference number: 5 (lower is better) Translates to: LKSSTSAAIPAWPWA*DPCEAVPCLSVPHA Trigger: TGCGTGTGGGACGCTCAGACAGGGGACTGCCTCACACGGATCCCACGCCCAGGGCCACGCCGGGATAGCTGCGGAGGTGGAGCTTTTGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | GGATGTACGCCACGGGGGCACCCACATACCACTCTGGCTGCTCGCTaGGCTCTCCTTGTTTGTGGTCAGAGTCCGCAGGCGGGGGCGAGT | + |
|
Preference number: 5 (lower is better) Translates to: GCTPRGHPHTTLAAR*ALLVCGQSPQAGAS Trigger: ACTCGCCCCCGCCTGCGGACTCTGACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGTGGGTGCCCCCGTGGCGTACATCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS TCA 90 bp | GCTCTGGGGGCAGCTGCACCGAGAAGTTGGTGTCGATTAAGCAGGTaGGGTCGGGCTGGTCCCCAAAGAGGGAAGGCGGTGGAGGCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALGAAAPRSWCRLSR*GRAGPQRGKAVEAL Trigger: GAGGGCCTCCACCGCCTTCCCTCTTTGGGGACCAGCCCGACCTCACCTGCTTAATCGACACCAACTTCTCGGTGCAGCTGCCCCCAGAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | ACCTCCAGCCGGCCGCTGCTCCGCCCAACCACGATGAGATTGCCTTaGAGCTCTAAGCTCCAGATGGAACCGGCTGTGCTGGGGGTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TSSRPLLRPTTMRLP*SSKLQMEPAVLGVQ Trigger: CTGGACCCCCAGCACAGCCGGTTCCATCTGGAGCTTAGAGCTGCAAGGCAATCTCATCGTGGTTGGGCGGAGCAGCGGCCGGCTGGAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | AGCTGCACCGAGAAGTTGGTGTCGATTAAGCAGGTGAGGTCGGGCTaGTCCCCAAAGAGGGAAGGCGGTGGAGGCCCTCGGGGGCGTCGT | + |
|
Preference number: 5 (lower is better) Translates to: SCTEKLVSIKQVRSG*SPKREGGGGPRGRR Trigger: ACGACGCCCCCGAGGGCCTCCACCGCCTTCCCTCTTTGGGGACCAGCCCGACCTCACCTGCTTAATCGACACCAACTTCTCGGTGCAGCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | ACGTGGACCAGGTTCTCTGCTCGGAGGCTGCAGTTGGGGCTGGGGTaGAGCAGCATGAGCCGGGCACGTAGGCTGCTCAGAAACTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: TWTRFSARRLQLGLG*SSMSRARRLLRNLA Trigger: TGCCAAGTTTCTGAGCAGCCTACGTGCCCGGCTCATGCTGCTGCACCCCAGCCCCAACTGCAGCCTCCGAGCAGAGAACCTGGTCCACGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | CCTCACCCAGTGGGCTCTGCTCTGTCACCTGGGCAGCAAGGTAGGTaGGCAGCCCTGCCGGGTCGGTGTATACCAGGATGCCAATCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PHPVGSALSPGQQGR*AALPGRCIPGCQSR Trigger: TCTGGATTGGCATCCTGGTATACACCGACCCGGCAGGGCTGCGCACCTACCTTGCTGCCCAGGTGACAGAGCAGAGCCCACTGGGTGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | AGTTTAGGAGCATCAGGTGGGAAGATGGAGAATGCAGGGTCCGGGTaGCTGGCAGGCAGCACTCCGCTAGGCACAGGCATGGGGCCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SLGASGGKMENAGSG*LAGSTPLGTGMGPR Trigger: CCTGGGCCCCATGCCTGTGCCTAGCGGAGTGCTGCCTGCCAGCCACCCGGACCCTGCATTCTCCATCTTCCCACCTGATGCTCCTAAACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | TCCTCATCCTCAGGCCCCCAAGTTACCTCTGGGGCTCGGCTGTCATaGACACCCTCTGCTGGACCAGCATGCTCAGGCAGCTCACCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGPQVTSGARLS*TPSAGPACSGSSPG Trigger: GCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGGCCTGAGGATGAGGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | TGGGCTCTGCTCTGTCACCTGGGCAGCAAGGTAGGTGCGCAGCCCTaGCGGGTCGGTGTATACCAGGATGCCAATCCAGACAACGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: WALLCHLGSKVGAQP*RVGVYQDANPDNGT Trigger: GGTACCGTTGTCTGGATTGGCATCCTGGTATACACCGACCCGGCAGGGCTGCGCACCTACCTTGCTGCCCAGGTGACAGAGCAGAGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | AGGCCCCCAAGTTACCTCTGGGGCTCGGCTGTCATGGACACCCTCTaGTGGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGTCTGGTT | + |
|
Preference number: 5 (lower is better) Translates to: RPPSYLWGSAVMDTL*WTSMLRQLTWQGLV Trigger: AACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGGCCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | TGTGGTCAGAGTCCGCAGGCGGGGGCGAGTAACCCTTCACAGGCGTaGAGAATTCCACAGGTCCCGTTCCAGGCAAGGGGAGCTTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGQSPQAGASNPSQA*RIPQVPFQARGASA Trigger: TGCTGAAGCTCCCCTTGCCTGGAACGGGACCTGTGGAATTCTCCACGCCTGTGAAGGGTTACTCGCCCCCGCCTGCGGACTCTGACCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
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| CDS CCA 90 bp | GTACAGCCTGCTGTCTCTCATATCGTGCTGGCCTCCCCACGGGCTTaGCTGAGGGCAGGCAGGATTCAGGGGGCAGCCGCTTGTTTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: VQPAVSHIVLASPRA*LRAGRIQGAAACLG Trigger: ACCTAAACAAGCGGCTGCCCCCTGAATCCTGCCTGCCCTCAGCCAAGCCCGTGGGGAGGCCAGCACGATATGAGAGACAGCAGGCTGTAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | CCCCCAAGTTACCTCTGGGGCTCGGCTGTCATGGACACCCTCTGCTaGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGTCTGGTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: PPSYLWGSAVMDTLC*TSMLRQLTWQGLVL Trigger: GAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | ACAGCAGCAGGCAGCCATGTTCGGGAAGTAGGCTCCGGAGTTTCCTaGGGCCTGGCAGCAGGTCTGTCACCTGCAGGCAAACCTCCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TAAGSHVREVGSGVS*GLAAGLSPAGKPPP Trigger: TGGAGGAGGTTTGCCTGCAGGTGACAGACCTGCTGCCAGGCCTCAGGAAACTCCGGAGCCTACTTCCCGAACATGGCTGCCTGCTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | CTGGTTCTCTGGCAGTTTAGGAGCATCAGGTGGGAAGATGGAGAATaGAGGGTCCGGGTGGCTGGCAGGCAGCACTCCGCTAGGCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLWQFRSIRWEDGE*RVRVAGRQHSARHR Trigger: CCTGTGCCTAGCGGAGTGCTGCCTGCCAGCCACCCGGACCCTGCATTCTCCATCTTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | GATGGTTGCAATGTGATGGTGTGTGGCGTGGATGGCCGTACAGCCTaGTGTCTCTCATATCGTGCTGGCCTCCCCACGGGCTTGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: DGCNVMVCGVDGRTA*CLSYRAGLPTGLAE Trigger: CTCAGCCAAGCCCGTGGGGAGGCCAGCACGATATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | ACCTCTGGGGCTCGGCTGTCATGGACACCCTCTGCTGGACCAGCATaGTCAGGCAGCTCACCTGGCAAGGTCTGGTTCTCTGGCAGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: TSGARLSWTPSAGPA*SGSSPGKVWFSGSL Trigger: TAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | CACAGGGCACTGTGTGGGTCCGATGACAGGTCACTGTGTTGCTGCTaGTGTACACAGATGAGGAAGGAGAACTGCCTCGCCCTGGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRALCGSDDRSLCCC*CTQMRKENCLALGS Trigger: GGACCCCAGGGCGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCACACAGTGCCCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | GTGCACAGGGCACTGTGTGGGTCCGATGACAGGTCACTGTGTTGCTaGTGCTGTACACAGATGAGGAAGGAGAACTGCCTCGCCCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: VHRALCGSDDRSLCC*CCTQMRKENCLALG Trigger: CCCCAGGGCGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCACACAGTGCCCTGTGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | CAATTTCCTCCACAGCTCCTCATCCTCAGGCCCCCAAGTTACCTCTaGGGCTCGGCTGTCATGGACACCCTCTGCTGGACCAGCATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: QFPPQLLILRPPSYL*GSAVMDTLCWTSML Trigger: GAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGGCCTGAGGATGAGGAGCTGTGGAGGAAATTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | GTGGGTCCGATGACAGGTCACTGTGTTGCTGCTGCTGTACACAGATaGGGAAGGAGAACTGCCTCGCCCTGGGGTCCCTCTGAACTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VGPMTGHCVAAAVHR*GRRTASPWGPSELQ Trigger: CTGCAGTTCAGAGGGACCCCAGGGCGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | AGGAGACACAGCCCTGGCCGCCGGTCACCAGAAGGTTATCTGAGATaGCACCCAAGCTTGCACCACAGCCCAGGTCCTGCTGAATGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: RRHSPGRRSPEGYLR*HPSLHHSPGPAEWS Trigger: ACTCCATTCAGCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGATAACCTTCTGGTGACCGGCGGCCAGGGCTGTGTCTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | GGTGTGCACAGGGCACTGTGTGGGTCCGATGACAGGTCACTGTGTTaGTGCTGCTGTACACAGATGAGGAAGGAGAACTGCCTCGCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVHRALCGSDDRSLC*CCCTQMRKENCLAL Trigger: CAGGGCGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCACACAGTGCCCTGTGCACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | AGGCAACACGAGTCATCCAGTCGGAAGACTCTTAGAGTATGGTCTTaGCTCCCTGTCACTAGGCGCCCGGCAGCAGCTCTCAGGGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RQHESSSRKTLRVWS*LPVTRRPAAALRAV Trigger: CACAGCCCTGAGAGCTGCTGCCGGGCGCCTAGTGACAGGGAGCCAAGACCATACTCTAAGAGTCTTCCGACTGGATGACTCGTGTTGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS-3UTR CAA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGGTCCCACACGCAGACTaGGCCTGCCAGGCAGCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AIASSLGPKSCYPLCPTLVPHAD*ACQAAA Trigger: AGCTGCTGCCTGGCAGGCCAAGTCTGCGTGTGGGAC...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 90 bp | CAGGTCTGTCACCTGCAGGCAAACCTCCTCCAGGCTCTTGGTCCCTaGGCTGTCTCTCAGCACATGGTTCCGGATCTCTTCCACCAGTTG | + |
|
Preference number: 5 (lower is better) Translates to: QVCHLQANLLQALGP*AVSQHMVPDLFHQL Trigger: CAACTGGTGGAAGAGATCCGGAACCATGTGCTGAGAGACAGCTCAGGGACCAAGAGCCTGGAGGAGGTTTGCCTGCAGGTGACAGACCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 90 bp | CCAAAAGGAGACACAGCCCTGGCCGCCGGTCACCAGAAGGTTATCTaGGATGACACCCAAGCTTGCACCACAGCCCAGGTCCTGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: PKGDTALAAGHQKVI*DDTQACTTAQVLLN Trigger: ATTCAGCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGATAACCTTCTGGTGACCGGCGGCCAGGGCTGTGTCTCCTTTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | GTCATGGACACCCTCTGCTGGACCAGCATGCTCAGGCAGCTCACCTaGCAAGGTCTGGTTCTCTGGCAGTTTAGGAGCATCAGGTGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VMDTLCWTSMLRQLT*QGLVLWQFRSIRWE Trigger: TTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | GTCCCAATGATGTCAGGGTCGGCATGGAATCTCTCCCAATCATTCTaGCAGAAGTTCCCAGGGGACAGCAGCAGGCAGCCATGTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VPMMSGSAWNLSQSF*QKFPGDSSRQPCSG Trigger: TCCCGAACATGGCTGCCTGCTGCTGTCCCCTGGGAACTTCTGGCAGAATGATTGGGAGAGATTCCATGCCGACCCTGACATCATTGGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 90 bp | ACACGCAGCCTTTTGGGAAGCCGCAGGTTTCGGAAGGAAGATGGTTaGAATGTGATGGTGTGTGGCGTGGATGGCCGTACAGCCTGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TRSLLGSRRFRKEDG*NVMVCGVDGRTACC Trigger: ACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTCCCAAAAGGCTGCGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 90 bp | CCTGAGCTGTCTCTCAGCACATGGTTCCGGATCTCTTCCACCAGTTaGAATGCTCGGGACAGAGGTGACCGGAACACATCGACTGCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: PELSLSTWFRISSTS*NARDRGDRNTSTAR Trigger: TCTGGCAGTCGATGTGTTCCGGTCACCTCTGTCCCGAGCATTCCAACTGGTGGAAGAGATCCGGAACCATGTGCTGAGAGACAGCTCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | GTTTCGGAAGGAAGATGGTTGCAATGTGATGGTGTGTGGCGTGGATaGCCGTACAGCCTGCTGTCTCTCATATCGTGCTGGCCTCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: VSEGRWLQCDGVWRG*PYSLLSLISCWPPH Trigger: GTGGGGAGGCCAGCACGATATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | GATGACACGCAGCCTTTTGGGAAGCCGCAGGTTTCGGAAGGAAGATaGTTGCAATGTGATGGTGTGTGGCGTGGATGGCCGTACAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: DDTQPFGKPQVSEGR*LQCDGVWRGWPYSL Trigger: CAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTCCCAAAAGGCTGCGTGTCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | TGGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGTCTGGTTCTCTaGCAGTTTAGGAGCATCAGGTGGGAAGATGGAGAATGCAGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WTSMLRQLTWQGLVL*QFRSIRWEDGECRV Trigger: GACCCTGCATTCTCCATCTTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | CCCTCTGCTGGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGTCTaGTTCTCTGGCAGTTTAGGAGCATCAGGTGGGAAGATGGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: PSAGPACSGSSPGKV*FSGSLGASGGKMEN Trigger: ATTCTCCATCTTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | GTAAAGAGGCAACACGAGTCATCCAGTCGGAAGACTCTTAGAGTATaGTCTTGGCTCCCTGTCACTAGGCGCCCGGCAGCAGCTCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VKRQHESSSRKTLRV*SWLPVTRRPAAALR Trigger: CCTGAGAGCTGCTGCCGGGCGCCTAGTGACAGGGAGCCAAGACCATACTCTAAGAGTCTTCCGACTGGATGACTCGTGTTGCCTCTTTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGCTCGCTGGGCTCTCCTaGTTTGTGGTCAGAGTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: AIASSLGPKSCYPLCPTLLAGLS*FVVRVR Trigger: GCGGACTCTGACCACAAACAAGGAGAGCCCAGCGAG...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCAAGATCTCACCGCCATaGAGTGTGGGCGTCAGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAIASSLGPKSCYPLCPTKISPP*SVGVRP Trigger: CGGCCTGACGCCCACACTCAATGGCGGTGAGATCTT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGTCAGGGGGCAGCCGCTaGTTTAGGTCTGCTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AIASSLGPKSCYPLCPTLSGGSR*FRSASS Trigger: GGAGCTAGCAGACCTAAACAAGCGGCTGCCCCCTGA...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | GGTCTGCTAGCTCCATCCGGCGAATGTCGATCGACAGGACAGTGGTaGAGAACAGCATCTGGAGGAAGAAGTCAGACACCAGGCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: GLLAPSGECRSTGQW*RTASGGRSQTPGPQ Trigger: TTGTGGGCCTGGTGTCTGACTTCTTCCTCCAGATGCTGTTCTTCACCACTGTCCTGTCGATCGACATTCGCCGGATGGAGCTAGCAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | GCCTTTTGGGAAGCCGCAGGTTTCGGAAGGAAGATGGTTGCAATGTaGTGGTGTGTGGCGTGGATGGCCGTACAGCCTGCTGTCTCTCAT | + |
|
Preference number: 5 (lower is better) Translates to: AFWEAAGFGRKMVAM*WCVAWMAVQPAVSH Trigger: ATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTCCCAAAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 90 bp | AAGCCGCAGGTTTCGGAAGGAAGATGGTTGCAATGTGATGGTGTGTaGCGTGGATGGCCGTACAGCCTGCTGTCTCTCATATCGTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: KPQVSEGRWLQCDGV*RGWPYSLLSLISCW Trigger: CCAGCACGATATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCACGGTGAGCAAATGTTaGGCTGACCCGGCTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: SAIASSLGPKSCYPLCPTTVSKC*ADPAAC Trigger: ACAGGCAGCCGGGTCAGCCAAACATTTGCTCACCGT...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | ATGGTTCCGGATCTCTTCCACCAGTTGGAATGCTCGGGACAGAGGTaGCCGGAACACATCGACTGCCAGAAGATTTCTGTGCCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: MVPDLFHQLECSGQR*PEHIDCQKISVPGR Trigger: TCTCCCTGGCACAGAAATCTTCTGGCAGTCGATGTGTTCCGGTCACCTCTGTCCCGAGCATTCCAACTGGTGGAAGAGATCCGGAACCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098350.10 ENSMUST00000198976.5 |
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| CDS TCA 90 bp | GTAGGCTGCTCAGAAACTTGGCATGGTAGCGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCCTTTTCCTTGTGTAGAGGCTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: VGCSETWHGSAGRPG*WCRRPSFSLCRGSP Trigger: GGGTGAGCCTCTACACAAGGAAAAGGATGGTCTCCTACACCATCACCCTGGTCTTCCAGCGCTACCATGCCAAGTTTCTGAGCAGCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | GGCCAGTACCATGGTCTGATCAATGTACACAGCTGTGATTGCCCCTaGGTGGCCCTTCAGGGTAAAGAGGCAACACGAGTCATCCAGTCG | + |
|
Preference number: 5 (lower is better) Translates to: GQYHGLINVHSCDCP*VALQGKEATRVIQS Trigger: CGACTGGATGACTCGTGTTGCCTCTTTACCCTGAAGGGCCACTCAGGGGCAATCACAGCTGTGTACATTGATCAGACCATGGTACTGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | ATGACACAGGAAGCGGTACAGGTGAGGGAGGTAACATCTCCACGGTaGGCAAATGTTTGGCTGACCCGGCTGCCTGTTAGTACATCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: MTQEAVQVREVTSPR*ANVWLTRLPVSTSH Trigger: GTGGGATGTACTAACAGGCAGCCGGGTCAGCCAAACATTTGCTCACCGTGGAGATGTTACCTCCCTCACCTGTACCGCTTCCTGTGTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | TGTCCAACACCAAAATCTGCCGGGCAGGCTGGGCTTCACTGTTCTTaGCCAAGTAGACTGTCTGTAACAGGTCCCCATAGTTTAGGTCCC | + |
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Preference number: 5 (lower is better) Translates to: CPTPKSAGQAGLHCS*PSRLSVTGPHSLGP Trigger: GGGACCTAAACTATGGGGACCTGTTACAGACAGTCTACTTGGGCAAGAACAGTGAAGCCCAGCCTGCCCGGCAGATTTTGGTGTTGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TCAGCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCCTTCACAAATATCTGTaGGATGTACGCCACGGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SAIASSLGPKSCYPLCPTLHKYL*DVRHGG Trigger: GCCCCCGTGGCGTACATCCAACAGATATTTGTGAAG...GGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGCTGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GCTATTGCCTCTAGTCTAGGTCCAAAGAGTTGCTATCCCCTGTGCCCCACCTTGAGACCATCCTTTTCCTaGTGTAGAGGCTCACCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AIASSLGPKSCYPLCPTLRPSFS*CRGSPH Trigger: GTGGGGTGAGCCTCTACACAAGGAAAAGGATGGTCT...CAAGGTGGGGCACAGGGGATAGCAACTCTTTGGACCTAGACTAGAGGCAATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCAGCGGGCAAAGGCTCTaGTGGGGCCCAGGCACTGCG | + |
|
Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVSGQRL*WGPGTA Trigger: CGCAGTGCCTGGGCCCCACAAGAGCCTTTGCCCGCT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 90 bp | CGGGACAGAGGTGACCGGAACACATCGACTGCCAGAAGATTTCTGTaGCAGGGAGACACCGATGACTTCACAAATATCTGTTGGATGTAC | + |
|
Preference number: 5 (lower is better) Translates to: RDRGDRNTSTARRFL*QGDTDDFTNICWMY Trigger: GTACATCCAACAGATATTTGTGAAGTCATCGGTGTCTCCCTGGCACAGAAATCTTCTGGCAGTCGATGTGTTCCGGTCACCTCTGTCCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
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| CDS TCA 90 bp | CTGATGTCTGTAGAGTTTTGGGCTCATGTTGATGGATGGTCCCAATaGTGTCAGGGTCGGCATGGAATCTCTCCCAATCATTCTGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: LMSVEFWAHVDGWSQ*CQGRHGISPNHSAR Trigger: TCTGGCAGAATGATTGGGAGAGATTCCATGCCGACCCTGACATCATTGGGACCATCCATCAACATGAGCCCAAAACTCTACAGACATCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 90 bp | AAGTCTTTGAGTGTGGCTGATGTCTGTAGAGTTTTGGGCTCATGTTaGTGGATGGTCCCAATGATGTCAGGGTCGGCATGGAATCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: KSLSVADVCRVLGSC*WMVPMMSGSAWNLS Trigger: GGAGAGATTCCATGCCGACCCTGACATCATTGGGACCATCCATCAACATGAGCCCAAAACTCTACAGACATCAGCCACACTCAAAGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCAGGGCGAGGCCCCACTaGGACTTGACCATGTCGATC | + |
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Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVRARPH*DLTMSI Trigger: GATCGACATGGTCAAGTCCAAGTGGGGCCTCGCCCT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCATGACACGCAGCCTTTaGGGAAGCCGCAGGTTTCGG | + |
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Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVMTRSL*GSRRFR Trigger: CCGAAACCTGCGGCTTCCCAAAAGGCTGCGTGTCAT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTCTTCCGGGCTAGCCTaGCCTCCATCTGACAGCCTT | + |
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Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVSSGLA*PPSDSL Trigger: AAGGCTGTCAGATGGAGGCAAGGCTAGCCCGGAAGA...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGCAGATGGCTCCATCTaGTCCTCCACTGGCCAGTAC | + |
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Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLADGSI*SSTGQY Trigger: GTACTGGCCAGTGGAGGACAAGATGGAGCCATCTGC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGATCTCTTCCACCAGTaGGAATGCTCGGGACAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLDLFHQ*ECSGQR Trigger: CCTCTGTCCCGAGCATTCCAACTGGTGGAAGAGATC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCATGCCAATCTCCTCTTaGAAGTGGACGTGGACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVMPISS*KWTWTR Trigger: CCTGGTCCACGTCCACTTCAAAGAGGAGATTGGCAT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGGCCCCACTTGGACTaGACCATGTCGATCTTGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLRPHLD*TMSILR Trigger: ACGCAAGATCGACATGGTCAAGTCCAAGTGGGGCCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCCAACCACGATGAGATaGCCTTGCAGCTCTAAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVPTTMR*PCSSKL Trigger: GAGCTTAGAGCTGCAAGGCAATCTCATCGTGGTTGG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGCTGCACCGAGAAGTaGGTGTCGATTAAGCAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLSCTEK*VSIKQV Trigger: CACCTGCTTAATCGACACCAACTTCTCGGTGCAGCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAGTTGATACCACTGACTaGGTGAGCACCAACACGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLVDTTD*VSTNTF Trigger: GAACGTGTTGGTGCTCACCAAGTCAGTGGTATCAAC...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTATCGGAAGGAAGATGGTaGCAATGTGATGGTGTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLSEGRW*QCDGVW Trigger: CCACACACCATCACATTGCAACCATCTTCCTTCCGA...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCCAGACAATGGCAGCATaGTCCAACACCAAAATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVQTMAA*SNTKIC Trigger: GCAGATTTTGGTGTTGGACAATGCTGCCATTGTCTG...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | TTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCTAAGCTCACTGCCAAAGTaGCAGACAATGGCAGCATTG | + |
|
Preference number: 5 (lower is better) Translates to: LLLQSGDNSSESAIASSLSSLPK*QTMAAL Trigger: CAATGCTGCCATTGTCTGCAACTTTGGCAGTGAGCT...TAGACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS-3UTR CAA 90 bp | GTTTATTATTACAGTCAGGAGACAACAGTTCAGAGTCAGCTATTGCCTCTAGTCAGTTTTGGGCTCATGTaGATGGATGGTCCCAATGAT | + |
|
Preference number: 5 (lower is better) Translates to: VYYYSQETTVQSQLLPLVSFGLM*MDGPND Trigger: ATCATTGGGACCATCCATCAACATGAGCCCAAAACT...GACTAGAGGCAATAGCTGACTCTGAACTGTTGTCTCCTGACTGTAATAATAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | GAGCGGCCACAGCCCACCCGGTGCCGAGGCTCGGGCTaGGTGGGCTCTGGGGGCAGCTGCACCGAGAAGTTG | + |
|
Preference number: 6 (lower is better) Translates to: ERPQPTRCRGSG*VGSGGSCTEKL Trigger: CAACTTCTCGGTGCAGCTGCCCCCAGAGCCCACTCAGCCCGAGCCTCGGCACCGGGTGGGCTGTGGCCGCTC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 72 bp | CGTAGTCATCGCAGGGCAGCTCCCCGCGCCTCCGCCTaGCGGGGCCACCACCCGGCTGCCCATAATTACGCG | + |
|
Preference number: 6 (lower is better) Translates to: RSHRRAAPRASA*RGHHPAAHNYA Trigger: CGCGTAATTATGGGCAGCCGGGTGGTGGCCCCGGCAGGCGGAGGCGCGGGGAGCTGCCCTGCGATGACTACG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 72 bp | TCGCAGCACCAGCGGCACTATCTCCGTCTCGGGCGGTaGGTAGCCGTAGTCATCGCAGGGCAGCTCCCCGCG | + |
|
Preference number: 6 (lower is better) Translates to: SQHQRHYLRLGR*VAVVIAGQLPA Trigger: CGCGGGGAGCTGCCCTGCGATGACTACGGCTACGCACCGCCCGAGACGGAGATAGTGCCGCTGGTGCTGCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 90 bp | TGGTCCCTTAGGTCCGGACTCCCAGAGGCCAGCGGGCAAAGGCTCTaGTGGGGCCCAGGCACTGCGACCATCCTGAGGGTGTCGCCCCTC | + |
|
Preference number: 6 (lower is better) Translates to: WSLRSGLPEASGQRL*WGPGTATILRVSPL Trigger: GAGGGGCGACACCCTCAGGATGGTCGCAGTGCCTGGGCCCCACAAGAGCCTTTGCCCGCTGGCCTCTGGGAGTCCGGACCTAAGGGACCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | CCTGGGCGTGGGATCCGTGTGAGGCAGTCCCCTGTCTaGGCGTCCCACACGCAGACTTGGCCTGCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGRGIRVRQSPV*ASHTQTWPARQ Trigger: CTGCCTGGCAGGCCAAGTCTGCGTGTGGGACGCTCAGACAGGGGACTGCCTCACACGGATCCCACGCCCAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | AGCTATCCCGGCGTGGCCCTGGGCGTGGGATCCGTGTaGGGCAGTCCCCTGTCTGAGCGTCCCACACGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: SYPGVALGVGSV*GSPLSERPTRR Trigger: TCTGCGTGTGGGACGCTCAGACAGGGGACTGCCTCACACGGATCCCACGCCCAGGGCCACGCCGGGATAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 72 bp | AGGTCCGGACTCCCAGAGGCCAGCGGGCAAAGGCTCTaGTGGGGCCCAGGCACTGCGACCATCCTGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: RSGLPEASGQRL*WGPGTATILRV Trigger: CACCCTCAGGATGGTCGCAGTGCCTGGGCCCCACAAGAGCCTTTGCCCGCTGGCCTCTGGGAGTCCGGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 72 bp | AGTCTCAAAAGCTCCACCTCCGCAGCTATCCCGGCGTaGCCCTGGGCGTGGGATCCGTGTGAGGCAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SLKSSTSAAIPA*PWAWDPCEAVP Trigger: GGGGACTGCCTCACACGGATCCCACGCCCAGGGCCACGCCGGGATAGCTGCGGAGGTGGAGCTTTTGAGACT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | GGCGCTGGGCCAGGCGAGTGCGGGCCAGGAAGTAGATaGCACGCAGCCTTTTGGGAAGCCGCAGGTTTCGGA | + |
|
Preference number: 6 (lower is better) Translates to: GAGPGECGPGSR*HAAFWEAAGFG Trigger: TCCGAAACCTGCGGCTTCCCAAAAGGCTGCGTGTCATCTACTTCCTGGCCCGCACTCGCCTGGCCCAGCGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | CCACGGGGGCACCCACATACCACTCTGGCTGCTCGCTaGGCTCTCCTTGTTTGTGGTCAGAGTCCGCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PRGHPHTTLAAR*ALLVCGQSPQA Trigger: CGCCTGCGGACTCTGACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGTGGGTGCCCCCGTGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS CAA 90 bp | CACGGGGGCACCCACATACCACTCTGGCTGCTCGCTGGGCTCTCCTaGTTTGTGGTCAGAGTCCGCAGGCGGGGGCGAGTAACCCTTCAC | + |
|
Preference number: 6 (lower is better) Translates to: HGGTHIPLWLLAGLS*FVVRVRRRGRVTLH Trigger: GTGAAGGGTTACTCGCCCCCGCCTGCGGACTCTGACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGTGGGTGCCCCCGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS CCA 72 bp | AGTCCGCAGGCGGGGGCGAGTAACCCTTCACAGGCGTaGAGAATTCCACAGGTCCCGTTCCAGGCAAGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SPQAGASNPSQA*RIPQVPFQARG Trigger: TCCCCTTGCCTGGAACGGGACCTGTGGAATTCTCCACGCCTGTGAAGGGTTACTCGCCCCCGCCTGCGGACT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS CCA 72 bp | TCAGGCCCCCAAGTTACCTCTGGGGCTCGGCTGTCATaGACACCCTCTGCTGGACCAGCATGCTCAGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SGPQVTSGARLS*TPSAGPACSGS Trigger: GCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACTTGGGGGCCTGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | CTCTGTCACCTGGGCAGCAAGGTAGGTGCGCAGCCCTaGCGGGTCGGTGTATACCAGGATGCCAATCCAGAC | + |
|
Preference number: 6 (lower is better) Translates to: LCHLGSKVGAQP*RVGVYQDANPD Trigger: GTCTGGATTGGCATCCTGGTATACACCGACCCGGCAGGGCTGCGCACCTACCTTGCTGCCCAGGTGACAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | CGGCCGCTGCTCCGCCCAACCACGATGAGATTGCCTTaGAGCTCTAAGCTCCAGATGGAACCGGCTGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RPLLRPTTMRLP*SSKLQMEPAVL Trigger: CAGCACAGCCGGTTCCATCTGGAGCTTAGAGCTGCAAGGCAATCTCATCGTGGTTGGGCGGAGCAGCGGCCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | TACCTCTGGGGCTCGGCTGTCATGGACACCCTCTGCTaGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: YLWGSAVMDTLC*TSMLRQLTWQG Trigger: ACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 72 bp | ACCCACATACCACTCTGGCTGCTCGCTGGGCTCTCCTaGTTTGTGGTCAGAGTCCGCAGGCGGGGGCGAGTA | + |
|
Preference number: 6 (lower is better) Translates to: THIPLWLLAGLS*FVVRVRRRGRV Trigger: TACTCGCCCCCGCCTGCGGACTCTGACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGTGGGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS CAA 72 bp | TCCAGCCGGCCGCTGCTCCGCCCAACCACGATGAGATaGCCTTGCAGCTCTAAGCTCCAGATGGAACCGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSRPLLRPTTMR*PCSSKLQMEPA Trigger: AGCCGGTTCCATCTGGAGCTTAGAGCTGCAAGGCAATCTCATCGTGGTTGGGCGGAGCAGCGGCCGGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | ACACCTCCAGCCGGCCGCTGCTCCGCCCAACCACGATaGGATTGCCTTGCAGCTCTAAGCTCCAGATGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: TPPAGRCSAQPR*DCLAALSSRWN Trigger: GTTCCATCTGGAGCTTAGAGCTGCAAGGCAATCTCATCGTGGTTGGGCGGAGCAGCGGCCGGCTGGAGGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | AGCCCTGGCCGCCGGTCACCAGAAGGTTATCTGAGATaGCACCCAAGCTTGCACCACAGCCCAGGTCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SPGRRSPEGYLR*HPSLHHSPGPA Trigger: AGCAGGACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGATAACCTTCTGGTGACCGGCGGCCAGGGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | GACACAGCCCTGGCCGCCGGTCACCAGAAGGTTATCTaGGATGACACCCAAGCTTGCACCACAGCCCAGGTC | + |
|
Preference number: 6 (lower is better) Translates to: DTALAAGHQKVI*DDTQACTTAQV Trigger: GACCTGGGCTGTGGTGCAAGCTTGGGTGTCATCTCAGATAACCTTCTGGTGACCGGCGGCCAGGGCTGTGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | ATGTACGCCACGGGGGCACCCACATACCACTCTGGCTaGTCGCTGGGCTCTCCTTGTTTGTGGTCAGAGTCC | + |
|
Preference number: 6 (lower is better) Translates to: MYATGAPTYHSG*SLGSPCLWSES Trigger: GGACTCTGACCACAAACAAGGAGAGCCCAGCGAGCAGCCAGAGTGGTATGTGGGTGCCCCCGTGGCGTACAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS GCA 72 bp | AATGTGATGGTGTGTGGCGTGGATGGCCGTACAGCCTaGTGTCTCTCATATCGTGCTGGCCTCCCCACGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NVMVCGVDGRTA*CLSYRAGLPTG Trigger: GCCCGTGGGGAGGCCAGCACGATATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | AGTTACCTCTGGGGCTCGGCTGTCATGGACACCCTCTaGTGGACCAGCATGCTCAGGCAGCTCACCTGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SYLWGSAVMDTL*WTSMLRQLTWQ Trigger: TTGCCAGGTGAGCTGCCTGAGCATGCTGGTCCAGCAGAGGGTGTCCATGACAGCCGAGCCCCAGAGGTAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 72 bp | AGTACTGTGACCACGGCTGCCAGGGCGAGGCCCCACTaGGACTTGACCATGTCGATCTTGCGTGTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: STVTTAARARPH*DLTMSILRVEK Trigger: CTTCTCCACACGCAAGATCGACATGGTCAAGTCCAAGTGGGGCCTCGCCCTGGCAGCCGTGGTCACAGTACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 72 bp | AGGACGATGCCCGCTGCTAGGCCAAGCGCGGCCACCTaGTACAAGGTAATGTCGCCATGGGTCTGTGTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: RTMPAARPSAAT*YKVMSPWVCVP Trigger: TGGAACACAGACCCATGGCGACATTACCTTGTACAAGGTGGCCGCGCTTGGCCTAGCAGCGGGCATCGTCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | TCTAGCCCAATAACGACCACCAGGTATGGGAAGATCTCACCGCCATaGAGTGTGGGCGTCAGGCCGAAGAGGGTGCAGAGCCCCACAGAC | + |
|
Preference number: 6 (lower is better) Translates to: SSPITTTRYGKISPP*SVGVRPKRVQSPTD Trigger: GTCTGTGGGGCTCTGCACCCTCTTCGGCCTGACGCCCACACTCAATGGCGGTGAGATCTTCCCATACCTGGTGGTCGTTATTGGGCTAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | CTGTCCAAGAAGACAAGGGCTGTGATGCCTGAGGAGATCTCCTCATaGCTGCAGCAGAGCACCCCCTCAATGGCGTCCCACACCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LSKKTRAVMPEEISS*LQQSTPSMASHTSS Trigger: GCTGGAGGTGTGGGACGCCATTGAGGGGGTGCTCTGCTGCAGCAATGAGGAGATCTCCTCAGGCATCACAGCCCTTGTCTTCTTGGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | GACACGCAGCCTTTTGGGAAGCCGCAGGTTTCGGAAGGAAGATGGTaGCAATGTGATGGTGTGTGGCGTGGATGGCCGTACAGCCTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DTQPFGKPQVSEGRW*QCDGVWRGWPYSLL Trigger: CAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTCCCAAAAGGCTGCGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | CACCTGCAGGCAAACCTCCTCCAGGCTCTTGGTCCCTaGGCTGTCTCTCAGCACATGGTTCCGGATCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HLQANLLQALGP*AVSQHMVPDLF Trigger: GAAGAGATCCGGAACCATGTGCTGAGAGACAGCTCAGGGACCAAGAGCCTGGAGGAGGTTTGCCTGCAGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | GGCAGCCATGTTCGGGAAGTAGGCTCCGGAGTTTCCTaGGGCCTGTCTCTCAGCACATGGTTCCGGATCTCT | + |
|
Preference number: 6 (lower is better) Translates to: GSHVREVGSGVS*GLSLSTWFRIS Trigger: AGAGATCCGGAACCATGTGCTGAGAGACAGGCCTCAGGAAACTCCGGAGCCTACTTCCCGAACATGGCTGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198976.5 |
||
| CDS CCA 72 bp | GGACCAGCATGCTCAGGCAGCTCACCTGGCAAGGTCTaGTTCTCTGGCAGTTTAGGAGCATCAGGTGGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: GPACSGSSPGKV*FSGSLGASGGK Trigger: CTTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCATGCTGGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | GAGTCATCCAGTCGGAAGACTCTTAGAGTATGGTCTTaGCTCCCTGTCACTAGGCGCCCGGCAGCAGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ESSSRKTLRVWS*LPVTRRPAAAL Trigger: GAGAGCTGCTGCCGGGCGCCTAGTGACAGGGAGCCAAGACCATACTCTAAGAGTCTTCCGACTGGATGACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 72 bp | ATAACGACCACCAGGTATGGGAAGATCTCACCGCCATaGAGTGTGGGCGTCAGGCCGAAGAGGGTGCAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: ITTTRYGKISPP*SVGVRPKRVQS Trigger: GCTCTGCACCCTCTTCGGCCTGACGCCCACACTCAATGGCGGTGAGATCTTCCCATACCTGGTGGTCGTTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 72 bp | AAGACAAGGGCTGTGATGCCTGAGGAGATCTCCTCATaGCTGCAGCAGAGCACCCCCTCAATGGCGTCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: KTRAVMPEEISS*LQQSTPSMASH Trigger: GTGGGACGCCATTGAGGGGGTGCTCTGCTGCAGCAATGAGGAGATCTCCTCAGGCATCACAGCCCTTGTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | GAAGCCGCAGGTTTCGGAAGGAAGATGGTTGCAATGTaGTGGTGTGTGGCGTGGATGGCCGTACAGCCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: EAAGFGRKMVAM*WCVAWMAVQPA Trigger: AGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | CTGTGTGGGTCCGATGACAGGTCACTGTGTTGCTGCTaGTGTACACAGATGAGGAAGGAGAACTGCCTCGCC | + |
|
Preference number: 6 (lower is better) Translates to: LCGSDDRSLCCC*CTQMRKENCLA Trigger: GGCGAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCACACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CCA 72 bp | CAGCCTTTTGGGAAGCCGCAGGTTTCGGAAGGAAGATaGTTGCAATGTGATGGTGTGTGGCGTGGATGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: QPFGKPQVSEGR*LQCDGVWRGWP Trigger: CGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCCTTCCGAAACCTGCGGCTTCCCAAAAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | CAACACGAGTCATCCAGTCGGAAGACTCTTAGAGTATaGTCTTGGCTCCCTGTCACTAGGCGCCCGGCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QHESSSRKTLRV*SWLPVTRRPAA Trigger: TGCTGCCGGGCGCCTAGTGACAGGGAGCCAAGACCATACTCTAAGAGTCTTCCGACTGGATGACTCGTGTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 72 bp | ACGAGCGGGATGAGCTCAGCAATGCCAATCTCCTCTTaGAAGTGGACGTGGACCAGGTTCTCTGCTCGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TSGMSSAMPISS*KWTWTRFSARR Trigger: CCTCCGAGCAGAGAACCTGGTCCACGTCCACTTCAAAGAGGAGATTGGCATTGCTGAGCTCATCCCGCTCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | GAAGCGGTACAGGTGAGGGAGGTAACATCTCCACGGTaGGCAAATGTTTGGCTGACCCGGCTGCCTGTTAGT | + |
|
Preference number: 6 (lower is better) Translates to: EAVQVREVTSPR*ANVWLTRLPVS Trigger: ACTAACAGGCAGCCGGGTCAGCCAAACATTTGCTCACCGTGGAGATGTTACCTCCCTCACCTGTACCGCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | GCACTGTGTGGGTCCGATGACAGGTCACTGTGTTGCTaGTGCTGTACACAGATGAGGAAGGAGAACTGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: ALCGSDDRSLCC*CCTQMRKENCL Trigger: GAGGCAGTTCTCCTTCCTCATCTGTGTACAGCAGCAGCAACACAGTGACCTGTCATCGGACCCACACAGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | TCTCTCAGCACATGGTTCCGGATCTCTTCCACCAGTTaGAATGCTCGGGACAGAGGTGACCGGAACACATCG | + |
|
Preference number: 6 (lower is better) Translates to: SLSTWFRISSTS*NARDRGDRNTS Trigger: CGATGTGTTCCGGTCACCTCTGTCCCGAGCATTCCAACTGGTGGAAGAGATCCGGAACCATGTGCTGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098350.10 ENSMUST00000198976.5 |
||
| CDS CCA 72 bp | GGAAGATGGTTGCAATGTGATGGTGTGTGGCGTGGATaGCCGTACAGCCTGCTGTCTCTCATATCGTGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: GRWLQCDGVWRG*PYSLLSLISCW Trigger: CCAGCACGATATGAGAGACAGCAGGCTGTACGGCCATCCACGCCACACACCATCACATTGCAACCATCTTCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS CAA 72 bp | CTGAGCTCACTGCCAAAGTTGCAGACAATGGCAGCATaGTCCAACACCAAAATCTGCCGGGCAGGCTGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSLPKLQTMAA*SNTKICRAGWA Trigger: AGCCCAGCCTGCCCGGCAGATTTTGGTGTTGGACAATGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | GCTCCATCCGGCGAATGTCGATCGACAGGACAGTGGTaGAGAACAGCATCTGGAGGAAGAAGTCAGACACCA | + |
|
Preference number: 6 (lower is better) Translates to: APSGECRSTGQW*RTASGGRSQTP Trigger: TGGTGTCTGACTTCTTCCTCCAGATGCTGTTCTTCACCACTGTCCTGTCGATCGACATTCGCCGGATGGAGC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | TTGCAGACAATGGCAGCATTGTCCAACACCAAAATCTaGCGGGCAGGCTGGGCTTCACTGTTCTTGCCCAAG | + |
|
Preference number: 6 (lower is better) Translates to: LQTMAALSNTKI*RAGWASLFLPK Trigger: CTTGGGCAAGAACAGTGAAGCCCAGCCTGCCCGGCAGATTTTGGTGTTGGACAATGCTGCCATTGTCTGCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | TGCCAGGGAGACACCGATGACTTCACAAATATCTGTTaGATGTACGCCACGGGGGCACCCACATACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: CQGDTDDFTNIC*MYATGAPTYHS Trigger: AGAGTGGTATGTGGGTGCCCCCGTGGCGTACATCCAACAGATATTTGTGAAGTCATCGGTGTCTCCCTGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
||
| CDS CCA 72 bp | ATGCTCAGGCAGCTCACCTGGCAAGGTCTGGTTCTCTaGCAGTTTAGGAGCATCAGGTGGGAAGATGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: MLRQLTWQGLVL*QFRSIRWEDGE Trigger: TTCTCCATCTTCCCACCTGATGCTCCTAAACTGCCAGAGAACCAGACCTTGCCAGGTGAGCTGCCTGAGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CCA 72 bp | CATCCCACAGGCAGATGGCTCCATCTTGTCCTCCACTaGCCAGTACCATGGTCTGATCAATGTACACAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: HPTGRWLHLVLH*PVPWSDQCTQL Trigger: CAGCTGTGTACATTGATCAGACCATGGTACTGGCCAGTGGAGGACAAGATGGAGCCATCTGCCTGTGGGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | ATCCGAAGCTTCACCTCGAGGTCCACTGGAGTTGATACCACTGACTaGGTGAGCACCAACACGTTCTCTAGCCCAATAACGACCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IRSFTSRSTGVDTTD*VSTNTFSSPITTTR Trigger: CCTGGTGGTCGTTATTGGGCTAGAGAACGTGTTGGTGCTCACCAAGTCAGTGGTATCAACTCCAGTGGACCTCGAGGTGAAGCTTCGGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | TACACTAGGCTGAGCTCACTGCCAAAGTTGCAGACAATGGCAGCATaGTCCAACACCAAAATCTGCCGGGCAGGCTGGGCTTCACTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: YTRLSSLPKLQTMAA*SNTKICRAGWASLF Trigger: GAACAGTGAAGCCCAGCCTGCCCGGCAGATTTTGGTGTTGGACAATGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTAGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 90 bp | TCCAGCACAGAGGGCACATACACTAGGCTGAGCTCACTGCCAAAGTaGCAGACAATGGCAGCATTGTCCAACACCAAAATCTGCCGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SSTEGTYTRLSSLPK*QTMAALSNTKICRA Trigger: TGCCCGGCAGATTTTGGTGTTGGACAATGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTAGTGTATGTGCCCTCTGTGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | GATCTCTTCCACCAGTTGGAATGCTCGGGACAGAGGTaGCCGGAACACATCGACTGCCAGAAGATTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: DLFHQLECSGQR*PEHIDCQKISV Trigger: CACAGAAATCTTCTGGCAGTCGATGTGTTCCGGTCACCTCTGTCCCGAGCATTCCAACTGGTGGAAGAGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000098350.10 ENSMUST00000198976.5 |
||
| CDS TCA 72 bp | CATGGTCTGATCAATGTACACAGCTGTGATTGCCCCTaGGTGGCCCTTCAGGGTAAAGAGGCAACACGAGTC | + |
|
Preference number: 6 (lower is better) Translates to: HGLINVHSCDCP*VALQGKEATRV Trigger: GACTCGTGTTGCCTCTTTACCCTGAAGGGCCACTCAGGGGCAATCACAGCTGTGTACATTGATCAGACCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | CCAGTTTCTCCAGCACAGAGGGCACATACACTAGGCTaGGCTCACTGCCAAAGTTGCAGACAATGGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PVSPAQRAHTLG*AHCQSCRQWQH Trigger: ATGCTGCCATTGTCTGCAACTTTGGCAGTGAGCTCAGCCTAGTGTATGTGCCCTCTGTGCTGGAGAAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS GCA 72 bp | CTTCATGATGGACCAGCTCTCACTACTCAAGCCTTGTaGAATCCGAAGCTTCACCTCGAGGTCCACTGGAGT | + |
|
Preference number: 6 (lower is better) Translates to: LHDGPALTTQAL*NPKLHLEVHWS Trigger: ACTCCAGTGGACCTCGAGGTGAAGCTTCGGATTGCACAAGGCTTGAGTAGTGAGAGCTGGTCCATCATGAAG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS TCA 72 bp | AGTGTGGCTGATGTCTGTAGAGTTTTGGGCTCATGTTaGTGGATGGTCCCAATGATGTCAGGGTCGGCATGG | + |
|
Preference number: 6 (lower is better) Translates to: SVADVCRVLGSC*WMVPMMSGSAW Trigger: CCATGCCGACCCTGACATCATTGGGACCATCCATCAACATGAGCCCAAAACTCTACAGACATCAGCCACACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
||
| CDS CAA 72 bp | TTCACCTCGAGGTCCACTGGAGTTGATACCACTGACTaGGTGAGCACCAACACGTTCTCTAGCCCAATAACG | + |
|
Preference number: 6 (lower is better) Translates to: FTSRSTGVDTTD*VSTNTFSSPIT Trigger: CGTTATTGGGCTAGAGAACGTGTTGGTGCTCACCAAGTCAGTGGTATCAACTCCAGTGGACCTCGAGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | TCAGAAACTTGGCATGGTAGCGCTGGAAGACCAGGGTaGTGGTGTAGGAGACCATCCTTTTCCTTGTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: SETWHGSAGRPG*WCRRPSFSLCR Trigger: TCTACACAAGGAAAAGGATGGTCTCCTACACCATCACCCTGGTCTTCCAGCGCTACCATGCCAAGTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS GCA 72 bp | GGTGACCGGAACACATCGACTGCCAGAAGATTTCTGTaGCAGGGAGACACCGATGACTTCACAAATATCTGT | + |
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Preference number: 6 (lower is better) Translates to: GDRNTSTARRFL*QGDTDDFTNIC Trigger: ACAGATATTTGTGAAGTCATCGGTGTCTCCCTGGCACAGAAATCTTCTGGCAGTCGATGTGTTCCGGTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000098350.10 ENSMUST00000197630.3 ENSMUST00000198976.5 |
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| CDS TCA 72 bp | GTAGAGTTTTGGGCTCATGTTGATGGATGGTCCCAATaGTGTCAGGGTCGGCATGGAATCTCTCCCAATCAT | + |
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Preference number: 6 (lower is better) Translates to: VEFWAHVDGWSQ*CQGRHGISPNH Trigger: ATGATTGGGAGAGATTCCATGCCGACCCTGACATCATTGGGACCATCCATCAACATGAGCCCAAAACTCTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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| CDS TCA 72 bp | CACTGTACTTCCCAGGAACACCAAACAGCAAGTCTTTaGGTGTGGCTGATGTCTGTAGAGTTTTGGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: HCTSQEHQTASL*VWLMSVEFWAH Trigger: ATGAGCCCAAAACTCTACAGACATCAGCCACACTCAAAGACTTGCTGTTTGGTGTTCCTGGGAAGTACAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000098350.10 |
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