Pregenerated sensors for SCAMP5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040722Ensembl transcript IDs: ENSMUST00000046587.8, ENSMUST00000213771.2, ENSMUST00000214256.2, ENSMUST00000215059.2, ENSMUST00000215734.2
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGCAGCCCCCATGGCTGCATTCTGGGCTGCCTGCTGCACATGTaGGTTCTTCCACGCTCCAGTGGTCCATTCCTCCTGAGCCTTGCT | + |
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Preference number: 1 (lower is better) Translates to: LSSPHGCILGCLLHM*VLPRSSGPFLLSLA Trigger: AGCAAGGCTCAGGAGGAATGGACCACTGGAGCGTGGAAGAACCCACATGTGCAGCAGGCAGCCCAGAATGCAGCCATGGGGGCTGCTCAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR CCA 90 bp | CAAGTGCCTCATACAAGCCAGCGGGAAATGCAGAGCGGCTCAAGGTaGATCTGGGCAGCAAGGGGTGGAAGCCAGGAGAGGGAAAAGGAG | + |
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Preference number: 1 (lower is better) Translates to: QVPHTSQREMQSGSR*IWAARGGSQEREKE Trigger: CTCCTTTTCCCTCTCCTGGCTTCCACCCCTTGCTGCCCAGATCCACCTTGAGCCGCTCTGCATTTCCCGCTGGCTTGTATGAGGCACTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 90 bp | GCATCACCACTGCTGAGCCGATGTTCGTCCCGAAGAAGGAAATGGTaGCAATCCAGCCGCAGACACCCCAGCCTGGAATTCCCACAGCCT | + |
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Preference number: 1 (lower is better) Translates to: ASPLLSRCSSRRRKW*QSSRRHPSLEFPQP Trigger: AGGCTGTGGGAATTCCAGGCTGGGGTGTCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTCAGCAGTGGTGATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR CCA 90 bp | CCCGAAGAAGGAAATGGTGGCAATCCAGCCGCAGACACCCCAGCCTaGAATTCCCACAGCCTGGATGATGCTGATGACCAGCTGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: PEEGNGGNPAADTPA*NSHSLDDADDQLSH Trigger: ATGGCTCAGCTGGTCATCAGCATCATCCAGGCTGTGGGAATTCCAGGCTGGGGTGTCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR CCA 90 bp | AATACTGAGTCTGCGGTTGATTCATGGCACCCTGAGCAGCCCCCATaGCTGCATTCTGGGCTGCCTGCTGCACATGTGGGTTCTTCCACG | + |
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Preference number: 1 (lower is better) Translates to: NTESAVDSWHPEQPP*LHSGLPAAHVGSST Trigger: CGTGGAAGAACCCACATGTGCAGCAGGCAGCCCAGAATGCAGCCATGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTCAGTATT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR TCA 90 bp | CTCATCAAAGTGCATAGTTGCCTGAAGATGCAGCATCCCAGTGCCTaGGCAGCTGGGCCAGACACTGGTGACAGGCTTTCCCAAGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LIKVHSCLKMQHPSA*AAGPDTGDRLSQGQ Trigger: CTGCCCTTGGGAAAGCCTGTCACCAGTGTCTGGCCCAGCTGCTCAGGCACTGGGATGCTGCATCTTCAGGCAACTATGCACTTTGATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR GCA 90 bp | ACCAATGATGCCCTCTGTTCCACCACGGCCTTTACACCTGGCAAGTaGCTCATACAAGCCAGCGGGAAATGCAGAGCGGCTCAAGGTGGA | + |
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Preference number: 1 (lower is better) Translates to: TNDALCSTTAFTPGK*LIQASGKCRAAQGG Trigger: TCCACCTTGAGCCGCTCTGCATTTCCCGCTGGCTTGTATGAGGCACTTGCCAGGTGTAAAGGCCGTGGTGGAACAGAGGGCATCATTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR GCA 90 bp | TCAGGACATTGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCTCTaGAGAATGTGTCCTGTAGCCAGGACAAGGGAGACTGGAGAGGTG | + |
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Preference number: 1 (lower is better) Translates to: SGHCACSLNWAWEHL*RMCPVARTRETGEV Trigger: CACCTCTCCAGTCTCCCTTGTCCTGGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 90 bp | CAGGAATCCTACTCAGGACATTGTGCTTGCAGCTTGAACTGGGCCTaGGAGCATCTCTGCAGAATGTGTCCTGTAGCCAGGACAAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: QESYSGHCACSLNWA*EHLCRMCPVARTRE Trigger: CTCCCTTGTCCTGGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 90 bp | GCCAACCAGGAATCCTACTCAGGACATTGTGCTTGCAGCTTGAACTaGGCCTGGGAGCATCTCTGCAGAATGTGTCCTGTAGCCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: ANQESYSGHCACSLN*AWEHLCRMCPVART Trigger: TGTCCTGGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR GCA 90 bp | AACAGCCAGCTGCTCCTTGGTAAGGCCTACCCACCTCAGGCCTCATaGAGAGGAATAAGATACCAGACAATGTCCACACCCTGCTTGAAA | + |
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Preference number: 1 (lower is better) Translates to: NSQLLLGKAYPPQAS*RGIRYQTMSTPCLK Trigger: TTTCAAGCAGGGTGTGGACATTGTCTGGTATCTTATTCCTCTGCATGAGGCCTGAGGTGGGTAGGCCTTACCAAGGAGCAGCTGGCTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 90 bp | AGGAAGTTGACTGGGGGTAACACCCAACAGCTGTGGATGCTAGGCTaGCAGCTGGATCACAGCTTTCCTGGAAGTAACAGAGGACTAAGA | + |
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Preference number: 1 (lower is better) Translates to: RKLTGGNTQQLWMLG*QLDHSFPGSNRGLR Trigger: TCTTAGTCCTCTGTTACTTCCAGGAAAGCTGTGATCCAGCTGCCAGCCTAGCATCCACAGCTGTTGGGTGTTACCCCCAGTCAACTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR TCA 90 bp | CTATTTGACTTCTCCTCAGATCTTCCCCCTTCAGACCTAACCTTCTaGCCTCTATCCTTTCTGCCAGACTCAATTAGAACAGCTACTCCT | + |
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Preference number: 1 (lower is better) Translates to: LFDFSSDLPPSDLTF*PLSFLPDSIRTATP Trigger: AGGAGTAGCTGTTCTAATTGAGTCTGGCAGAAAGGATAGAGGTCAGAAGGTTAGGTCTGAAGGGGGAAGATCTGAGGAGAAGTCAAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR TCA 90 bp | AAGGAACTTTCCAGACACTCTTGGATTCTCTTACAAGGAAGAAGCTaGAAAATCAAAGCTCAAGGTGGCCTGAAACCAAGTCTTAGGGTC | + |
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Preference number: 1 (lower is better) Translates to: KELSRHSWILLQGRS*KIKAQGGLKPSLRV Trigger: GACCCTAAGACTTGGTTTCAGGCCACCTTGAGCTTTGATTTTTCAGCTTCTTCCTTGTAAGAGAATCCAAGAGTGTCTGGAAAGTTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | CATCACCCTGCACAAGGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTGGACTGGCCCCCAGCCCTaGCTCCTGGTGGGCTTGGCT | + |
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Preference number: 2 (lower is better) Translates to: HHPAQGIWLPARPPPGLWTGPQP*LLVGLA Trigger: AGCCAAGCCCACCAGGAGGCAGGGCTGGGGGCCAGT...CCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGGGTGATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | CACTGGCTGGCGACAGACAGGAGGACTCCCAGCATCCACCAGGCCCTCCCACCCTTAGGCTCATCACCCTaGACAAGGTATCTGGCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HWLATDRRTPSIHQALPPLGSSP*TRYLAP Trigger: GGGAGCCAGATACCTTGTGCAGGGTGATGAGCCTAA...GGGTGGGAGGGCCTGGTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | CAGCGACCAATGATGCCCTCTGTTCCACCACGGCCTTTACACCTGGCAAGTGCCCCTGCACAAGGTATCTaGCTCCCTGCTAGGCCTCCC | + |
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Preference number: 2 (lower is better) Translates to: QRPMMPSVPPRPLHLASAPAQGI*LPARPP Trigger: GGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGG...GGCACTTGCCAGGTGTAAAGGCCGTGGTGGAACAGAGGGCATCATTGGTCGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGAGAATGCAAAAGCAGGTCACTGGCTGGCGACAGACAGGAGGACTCCCATCAGAGGGGACAACCTaGTGGATGGAGGGGGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: TRRMQKQVTGWRQTGGLPSEGTT*WMEGAG Trigger: ACCAGCCCCCTCCATCCATCAGGTTGTCCCCTCTGA...TGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | ATCACCCTGCACAAGGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTGGAACCACACAGAAGATGTaGCTTAAGCCCCCTGTCCCA | + |
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Preference number: 2 (lower is better) Translates to: ITLHKVSGSLLGLPLACGTTQKM*LKPPVP Trigger: TGGGACAGGGGGCTTAAGCCACATCTTCTGTGTGGT...TCCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGGGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | GAGTCTGCGGTTGATTCATGGCACCCTGAGCAGCCCCCATGGCTGCATTCTGGGTCTTCCACGCTCCAGTaGTCCATTCCTCCTGAGCCT | + |
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Preference number: 2 (lower is better) Translates to: ESAVDSWHPEQPPWLHSGSSTLQ*SIPPEP Trigger: AGGCTCAGGAGGAATGGACCACTGGAGCGTGGAAGA...CCCAGAATGCAGCCATGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR-3UTR CCA 90 bp | GGAGAGGTGAACTACCCTCTCAATGGGTCCTATTTGACTTCTCCTCAGATCTTCCCTCCCCCTGGCCTGTaGAGTCTCTGGGCCAGGGTC | + |
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Preference number: 2 (lower is better) Translates to: GEVNYPLNGSYLTSPQIFPPPGL*SLWARV Trigger: GACCCTGGCCCAGAGACTCCACAGGCCAGGGGGAGG...GAAGATCTGAGGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAAACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGGAAGCCCTTCTGAGCTaGGGCCAGCCACACCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: RQTNVVWFSSLPSLGGFLEALLS*GQPHLP Trigger: GGGGAGGTGTGGCTGGCCCCAGCTCAGAAGGGCTTC...CAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGTTTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CAA 90 bp | CCTCCTGCCAACCAGGAATCCTACTCAGGACATTGTGCTTGCAGCTaGAACTGGGCCTGGGAGCATCTCTGCAGAATGTGTCCTGTAGCC | + |
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Preference number: 2 (lower is better) Translates to: PPANQESYSGHCACS*NWAWEHLCRMCPVA Trigger: GGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGCAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CAA 90 bp | TGCCCTTCCTCCTGCCAACCAGGAATCCTACTCAGGACATTGTGCTaGCAGCTTGAACTGGGCCTGGGAGCATCTCTGCAGAATGTGTCC | + |
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Preference number: 2 (lower is better) Translates to: CPSSCQPGILLRTLC*QLELGLGASLQNVS Trigger: GGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGCAGGAGGAAGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR TCA 90 bp | GTTACACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTTGGGCCAGACACTGGTaGCAGGCTTTCCCAAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: VTQIDTGSGRSTANEGIVWARHW*QAFPRA Trigger: TGCCCTTGGGAAAGCCTGTCACCAGTGTCTGGCCCA...AACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | GTTACACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTGGAGATGCCTGCCTCTaGGGGCCAGGCTTGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: VTQIDTGSGRSTANEGIVGDACL*GPGLQN Trigger: ATTCTGCAAGCCTGGCCCGCAGAGGCAGGCATCTCC...AACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | AATGAGGGGATAGTTTGTGTCTCTCAGAAACAAGGGGCAGTGGGCACCAGGAGACAGAGCGGCTCAAGGTaGATCTGGGCAGCAAGGGGT | + |
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Preference number: 2 (lower is better) Translates to: NEGIVCVSQKQGAVGTRRQSGSR*IWAARG Trigger: ACCCCTTGCTGCCCAGATCCACCTTGAGCCGCTCTG...TCTCCTGGTGCCCACTGCCCCTTGTTTCTGAGAGACACAAACTATCCCCTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCTGCACATGTGGGTTCTTCCACGCTCCAGTGGTCCATTCCTCCTGAGCCTTTCCCGAAGAAGGAAATaGTGGCAATCCAGCCGCAGA | + |
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Preference number: 2 (lower is better) Translates to: LLHMWVLPRSSGPFLLSLSRRRK*WQSSRR Trigger: TCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGA...AAGGCTCAGGAGGAATGGACCACTGGAGCGTGGAAGAACCCACATGTGCAGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR-3UTR TCA 90 bp | ACCAGGAGAATGCAAAAGCAGGTCACTGGCTGGCGACAGACAGGAGGACTCCCATCAGACCTAACCTTCTaGCCTCTATCCTTTCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: TRRMQKQVTGWRQTGGLPSDLTF*PLSFLP Trigger: TGGCAGAAAGGATAGAGGTCAGAAGGTTAGGTCTGA...TGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR TCA 90 bp | AATGAGGGGATAGTTTGTGTCTCTCAGAAACAAGGGGCAGTGGGCACCAGGAGAATTGTGCTTGCAGCTTaGACTGGGCCTGGGAGCATC | + |
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Preference number: 2 (lower is better) Translates to: NEGIVCVSQKQGAVGTRRIVLAA*TGPGSI Trigger: GATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAAT...TCTCCTGGTGCCCACTGCCCCTTGTTTCTGAGAGACACAAACTATCCCCTCATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCTCTGCAGAATGTGTCCAGGGGGAACCCTGCTTaGTCACCACACAGAAGATGT | + |
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Preference number: 2 (lower is better) Translates to: TLCLQLELGLGASLQNVSRGNPA*SPHRRC Trigger: ACATCTTCTGTGTGGTGACCAAGCAGGGTTCCCCCT...GGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | ACCAGGAGAATGCAAAAGCAGGTCACTGGCTGGCGACAGACAGGAGGACTCCCACGGATTGGGGGTATCTaGGTAGTCTTAAAAGCAGAC | + |
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Preference number: 2 (lower is better) Translates to: TRRMQKQVTGWRQTGGLPRIGGI*VVLKAD Trigger: GTCTGCTTTTAAGACTACCCAGATACCCCCAATCCG...TGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAAGGAGATGAGCTGGGCAGCAAGGGGTaGAAGCCAGGAGAGGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: VWFSSLPSLGGFLLQGDELGSKG*KPGEGK Trigger: TTTTCCCTCTCCTGGCTTCCACCCCTTGCTGCCCAG...CTCATCTCCTTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | CTGAGCCTTGCTGAAACTGCCTCCGCTACCCCGGTAGAACTTATGAACCATGCTGGAATTCCCACAGCCTaGATGATGCTGATGACCAGC | + |
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Preference number: 2 (lower is better) Translates to: LSLAETASATPVELMNHAGIPTA*MMLMTS Trigger: GCTGGTCATCAGCATCATCCAGGCTGTGGGAATTCC...AGCATGGTTCATAAGTTCTACCGGGGTAGCGGAGGCAGTTTCAGCAAGGCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR-3UTR GCA 90 bp | GTTACACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTACACTTCTTGTGCAGTaGAAAGTTCCCAGAGGACCC | + |
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Preference number: 2 (lower is better) Translates to: VTQIDTGSGRSTANEGIVTLLVQ*KVPRGP Trigger: GGGTCCTCTGGGAACTTTGCACTGCACAAGAAGTGT...AACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | GAGTGGCAGAATACTGAGTCTGCGGTTGATTCATGGCACCCTGAGCAGCCCCCAGAAGGTGAAGAAGAATaGCATGAAGCTGAAGGAACT | + |
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Preference number: 2 (lower is better) Translates to: EWQNTESAVDSWHPEQPPEGEEE*HEAEGT Trigger: AGTTCCTTCAGCTTCATGGCATTCTTCTTCACCTTC...TGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTCAGTATTCTGCCACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCCTTTATTATATTCATCCAGTTACACAGATAGACACTGGCTCGGGCAGGGGAGACTGGAGAGGTaGACTACCCTCTCAATGGGT | + |
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Preference number: 2 (lower is better) Translates to: MIPLLYSSSYTDRHWLGQGRLER*TTLSMG Trigger: ACCCATTGAGAGGGTAGTTCACCTCTCCAGTCTCCC...CTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATAATAAAGGGATCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | GTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAAGGAGATGAGGAACTACCCTCTCAATaGGTCCTATTTGACTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: VWFSSLPSLGGFLLQGDEELPSQ*VLFDFS Trigger: GGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTC...CTCATCTCCTTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR TCA 90 bp | ACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAAAGCCAGCTAGGGAAATaGGCACAAAGAATCTCACAA | + |
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Preference number: 2 (lower is better) Translates to: TNVVWFSSLPSLGGFLLQSQLGK*AQRISQ Trigger: TTGTGAGATTCTTTGTGCTCATTTCCCTAGCTGGCT...TTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATCCCTTTATTATATTCATCCAGTTACACAGATAGACACTGGCTCGGGCAGGATAGGACAGGAAGTTaGCTGGGGGTAACACCCAAC | + |
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Preference number: 2 (lower is better) Translates to: MIPLLYSSSYTDRHWLGQDRTGS*LGVTPN Trigger: GTTGGGTGTTACCCCCAGTCAACTTCCTGTCCTATC...CTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATAATAAAGGGATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAAACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGAGGCTTGGCTACCAATaGACAGAAAACACTTCTTGT | + |
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Preference number: 2 (lower is better) Translates to: RQTNVVWFSSLPSLGGFLRLGYQ*TENTSC Trigger: ACAAGAAGTGTTTTCTGTGCATTGGTAGCCAAGCCT...CAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGTTTGCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR GCA 90 bp | CTATCCTTTCTGCCAGACTCAATTAGAACAGCTACTCCTTCCAGGAATCCAGTGAGAAAACACTTCTTGTaGAGTGCAAAGTTCCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: LSFLPDSIRTATPSRNPVRKHFL*SAKFPE Trigger: CTCTGGGAACTTTGCACTGCACAAGAAGTGTTTTCT...CACTGGATTCCTGGAAGGAGTAGCTGTTCTAATTGAGTCTGGCAGAAAGGATAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR-3UTR CCA 90 bp | ATGATCCCTTTATTATATTCATCCAGTTACACAGATAGACACTGGCTCGGGCAGCAACGAAAAGCTACATaGGGAGGAAAAAGATCACGG | + |
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Preference number: 2 (lower is better) Translates to: MIPLLYSSSYTDRHWLGQQRKAT*GGKRSR Trigger: CCGTGATCTTTTTCCTCCCCATGTAGCTTTTCGTTG...CTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATAATAAAGGGATCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 72 bp | GGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTaGAGTCTCTGGGCCAGGGTCAGAGGGGACAACCTG | + |
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Preference number: 3 (lower is better) Translates to: GIWLPARPPPGL*SLWARVRGDNL Trigger: CAGGTTGTCCCCTCTGACCCTGGCCCAGAGACTCCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 72 bp | GAATCCCCAAGCTGGGTGCCCCTTCCACGTCAGGGTTaGCTGAGCTCCCATGTCAGCTTCCTGGAACTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ESPSWVPLPRQG*LSSHVSFLELG Trigger: CCCCAGTTCCAGGAAGCTGACATGGGAGCTCAGCCAACCCTGACGTGGAAGGGGCACCCAGCTTGGGGATTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 72 bp | GCAGAGCGGCTCAAGGTGGATCTGGGCAGCAAGGGGTaGAAGCCAGGAGAGGGAAAAGGAGATGCCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: AERLKVDLGSKG*KPGEGKGDACL Trigger: GAGGCAGGCATCTCCTTTTCCCTCTCCTGGCTTCCACCCCTTGCTGCCCAGATCCACCTTGAGCCGCTCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| 3UTR CCA 72 bp | AGCCAGCGGGAAATGCAGAGCGGCTCAAGGTGGATCTaGGCAGCAAGGGGTGGAAGCCAGGAGAGGGAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: SQREMQSGSRWI*AARGGSQEREK Trigger: CTTTTCCCTCTCCTGGCTTCCACCCCTTGCTGCCCAGATCCACCTTGAGCCGCTCTGCATTTCCCGCTGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | GTGGGCACCAGGAGAATGCAAAAGCAGGTCACTGGCTaGCGACAGACAGGAGGACTCCCAGCATCCACCAGG | + |
|
Preference number: 3 (lower is better) Translates to: VGTRRMQKQVTG*RQTGGLPASTR Trigger: CCTGGTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGTGCCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | GGCAGTGGGCACCAGGAGAATGCAAAAGCAGGTCACTaGCTGGCGACAGACAGGAGGACTCCCAGCATCCAC | + |
|
Preference number: 3 (lower is better) Translates to: GSGHQENAKAGH*LATDRRTPSIH Trigger: GTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGTGCCCACTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | CCCCATGGCTGCATTCTGGGCTGCCTGCTGCACATGTaGGTTCTTCCACGCTCCAGTGGTCCATTCCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PHGCILGCLLHM*VLPRSSGPFLL Trigger: CAGGAGGAATGGACCACTGGAGCGTGGAAGAACCCACATGTGCAGCAGGCAGCCCAGAATGCAGCCATGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| 3UTR GCA 72 bp | GCCCTCTGTTCCACCACGGCCTTTACACCTGGCAAGTaGCTCATACAAGCCAGCGGGAAATGCAGAGCGGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALCSTTAFTPGK*LIQASGKCRAA Trigger: AGCCGCTCTGCATTTCCCGCTGGCTTGTATGAGGCACTTGCCAGGTGTAAAGGCCGTGGTGGAACAGAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | ACTGGTGACAGGCTTTCCCAAGGGCAGTGCCAGGCATaGCCAATAGGTGTGAGCCAGGAAAGAGGAGAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TGDRLSQGQCQA*PIGVSQERGEA Trigger: GGCCTCTCCTCTTTCCTGGCTCACACCTATTGGCCATGCCTGGCACTGCCCTTGGGAAAGCCTGTCACCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | CCACTGCTGAGCCGATGTTCGTCCCGAAGAAGGAAATaGTGGCAATCCAGCCGCAGACACCCCAGCCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: PLLSRCSSRRRK*WQSSRRHPSLE Trigger: TTCCAGGCTGGGGTGTCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTCAGCAGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| 3UTR CCA 72 bp | CTGCTGAGCCGATGTTCGTCCCGAAGAAGGAAATGGTaGCAATCCAGCCGCAGACACCCCAGCCTGGAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSRCSSRRRKW*QSSRRHPSLEF Trigger: GAATTCCAGGCTGGGGTGTCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTCAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| 3UTR TCA 72 bp | TCCACGCTCCAGTGGTCCATTCCTCCTGAGCCTTGCTaGAACTGCCTCCGCTACCCCGGTAGAACTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: STLQWSIPPEPC*NCLRYPGRTYE Trigger: TTCATAAGTTCTACCGGGGTAGCGGAGGCAGTTTCAGCAAGGCTCAGGAGGAATGGACCACTGGAGCGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| 3UTR GCA 72 bp | TGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCTCTaGAGAATGTGTCCTGTAGCCAGGACAAGGGAGACT | + |
|
Preference number: 3 (lower is better) Translates to: CACSLNWAWEHL*RMCPVARTRET Trigger: AGTCTCCCTTGTCCTGGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR GCA 72 bp | CCTGCCAACCAGGAATCCTACTCAGGACATTGTGCTTaGAGCTTGAACTGGGCCTGGGAGCATCTCTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PANQESYSGHCA*SLNWAWEHLCR Trigger: TCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGCAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | GACAGGAAGTTGACTGGGGGTAACACCCAACAGCTGTaGATGCTAGGCTGGCAGCTGGATCACAGCTTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: DRKLTGGNTQQL*MLGWQLDHSFP Trigger: AGGAAAGCTGTGATCCAGCTGCCAGCCTAGCATCCACAGCTGTTGGGTGTTACCCCCAGTCAACTTCCTGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | TGTGGAGTCTCTGGGCCAGGGTCAGAGGGGACAACCTaGTGGATGGAGGGGGCTGGTTTAGTTCTAAACATA | + |
|
Preference number: 3 (lower is better) Translates to: CGVSGPGSEGTT*WMEGAGLVLNI Trigger: TATGTTTAGAACTAAACCAGCCCCCTCCATCCATCAGGTTGTCCCCTCTGACCCTGGCCCAGAGACTCCACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | TCTCTCACTCTCTCCTCATCAAAGTGCATAGTTGCCTaGAGATGCAGCATCCCAGTGCCTGAGCAGCTGGGC | + |
|
Preference number: 3 (lower is better) Translates to: SLTLSSSKCIVA*RCSIPVPEQLG Trigger: GCCCAGCTGCTCAGGCACTGGGATGCTGCATCTTCAGGCAACTATGCACTTTGATGAGGAGAGAGTGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR GCA 72 bp | AGGGAAAAGGAGATGCCTGCCTCTGCGGGCCAGGCTTaGAGAATCAAGGAGATCAGCTCTGCATTTCCATTC | + |
|
Preference number: 3 (lower is better) Translates to: REKEMPASAGQA*RIKEISSAFPF Trigger: GAATGGAAATGCAGAGCTGATCTCCTTGATTCTGCAAGCCTGGCCCGCAGAGGCAGGCATCTCCTTTTCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR GCA 72 bp | CTGCTCCTTGGTAAGGCCTACCCACCTCAGGCCTCATaGAGAGGAATAAGATACCAGACAATGTCCACACCC | + |
|
Preference number: 3 (lower is better) Translates to: LLLGKAYPPQAS*RGIRYQTMSTP Trigger: GGGTGTGGACATTGTCTGGTATCTTATTCCTCTGCATGAGGCCTGAGGTGGGTAGGCCTTACCAAGGAGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | TACTCAGGACATTGTGCTTGCAGCTTGAACTGGGCCTaGGAGCATCTCTGCAGAATGTGTCCTGTAGCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: YSGHCACSLNWA*EHLCRMCPVAR Trigger: CCTGGCTACAGGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | ACTGGGGGTAACACCCAACAGCTGTGGATGCTAGGCTaGCAGCTGGATCACAGCTTTCCTGGAAGTAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGGNTQQLWMLG*QLDHSFPGSNR Trigger: TCTGTTACTTCCAGGAAAGCTGTGATCCAGCTGCCAGCCTAGCATCCACAGCTGTTGGGTGTTACCCCCAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | ACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATaGGGGGATAGTTTGTGTCTCTCAGAAACAAGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: TDRHWLGQVNCQ*GDSLCLSETRG Trigger: GCCCCTTGTTTCTGAGAGACACAAACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR GCA 72 bp | TTGGCTACCAATGCACAGAAAACACTTCTTGTGCAGTaGAAAGTTCCCAGAGGACCCAAAGGTGGGGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: LATNAQKTLLVQ*KVPRGPKGGGR Trigger: CCTGCCCCCACCTTTGGGTCCTCTGGGAACTTTGCACTGCACAAGAAGTGTTTTCTGTGCATTGGTAGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAAAAGGGGGAACCCTGCTaGGTCACCACACAGAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: TNVVWFSSLPSLGGFLLQKGEPC*VTTQKM Trigger: CATCTTCTGTGTGGTGACCAAGCAGGGTTCCCCCTT...TTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | GACAAGGGAGACTGGAGAGGTGAACTACCCTCTCAATaGGTCCTATTTGACTTCTCCTCAGATCTTCCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: DKGDWRGELPSQ*VLFDFSSDLPP Trigger: AGGGGGAAGATCTGAGGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCCAGTCTCCCTTGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CCA 72 bp | CTGCAGAATGTGTCCTGTAGCCAGGACAAGGGAGACTaGAGAGGTGAACTACCCTCTCAATGGGTCCTATTT | + |
|
Preference number: 3 (lower is better) Translates to: LQNVSCSQDKGD*RGELPSQWVLF Trigger: AAATAGGACCCATTGAGAGGGTAGTTCACCTCTCCAGTCTCCCTTGTCCTGGCTACAGGACACATTCTGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGATCCCTTTATTATATTCATCCAGTTACACAGATAGACACTGGCTCGGGCAGACAGCCAGCTGCTCCTaGGTAAGGCCTACCCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: MIPLLYSSSYTDRHWLGQTASCS*VRPTHL Trigger: GAGGTGGGTAGGCCTTACCAAGGAGCAGCTGGCTGT...CTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATAATAAAGGGATCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | CTCTCTGTCCCATCGCCTAGAACCTGCCTATCACCATaGACACTAATACTGTTGCTTCCCAATGGGACTAAA | + |
|
Preference number: 3 (lower is better) Translates to: LSVPSPRTCLSP*TLILLLPNGTK Trigger: TTTAGTCCCATTGGGAAGCAACAGTATTAGTGTTCATGGTGATAGGCAGGTTCTAGGCGATGGGACAGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | TTCTCCTCAGATCTTCCCCCTTCAGACCTAACCTTCTaGCCTCTATCCTTTCTGCCAGACTCAATTAGAACA | + |
|
Preference number: 3 (lower is better) Translates to: FSSDLPPSDLTF*PLSFLPDSIRT Trigger: TGTTCTAATTGAGTCTGGCAGAAAGGATAGAGGTCAGAAGGTTAGGTCTGAAGGGGGAAGATCTGAGGAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR GCA 72 bp | CATTATCTCACAAGGGGACATAGGCTTGGCTACCAATaGACAGAAAACACTTCTTGTGCAGTGCAAAGTTCC | + |
|
Preference number: 3 (lower is better) Translates to: HYLTRGHRLGYQ*TENTSCAVQSS Trigger: GGAACTTTGCACTGCACAAGAAGTGTTTTCTGTGCATTGGTAGCCAAGCCTATGTCCCCTTGTGAGATAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | AAGGAAGAAGCTGAAAAATCAAAGCTCAAGGTGGCCTaGAACCAAGTCTTAGGGTCCAAGGCAAACCAATGT | + |
|
Preference number: 3 (lower is better) Translates to: KEEAEKSKLKVA*NQVLGSKANQC Trigger: ACATTGGTTTGCCTTGGACCCTAAGACTTGGTTTCAGGCCACCTTGAGCTTTGATTTTTCAGCTTCTTCCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR TCA 72 bp | TCCAGACACTCTTGGATTCTCTTACAAGGAAGAAGCTaGAAAATCAAAGCTCAAGGTGGCCTGAAACCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SRHSWILLQGRS*KIKAQGGLKPS Trigger: ACTTGGTTTCAGGCCACCTTGAGCTTTGATTTTTCAGCTTCTTCCTTGTAAGAGAATCCAAGAGTGTCTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGCTGGCGACAGACAGGAGGACTCCCAGCATCCACCAGGCCCTCCCACCCCCTGAGCAGCCCCCATaGCTGCATTCTGGGCTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: HWLATDRRTPSIHQALPPPEQPP*LHSGLP Trigger: AGGCAGCCCAGAATGCAGCCATGGGGGCTGCTCAGG...GGGTGGGAGGGCCTGGTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | CACTGGCTGGCGACAGACAGGAGGACTCCCAGCATCCACCAGGCCCTCCCACCCGCAGACACCCCAGCCTaGAATTCCCACAGCCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HWLATDRRTPSIHQALPPADTPA*NSHSLD Trigger: ATCCAGGCTGTGGGAATTCCAGGCTGGGGTGTCTGC...GGGTGGGAGGGCCTGGTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR GCA 90 bp | CATCACCCTGCACAAGGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTGGGGCTGCATTCTGGGCTaGCTGCTGCACATGTGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHPAQGIWLPARPPPGLWGCILG*LLHMWV Trigger: AACCCACATGTGCAGCAGGCAGCCCAGAATGCAGCC...CCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGGGTGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CAA 72 bp | AGAATCCCCAAGCTGGGTGCCCCTTCCACGTCAGGGTaGGCTGAGCTCCCATGTCAGCTTCCTGGAACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RIPKLGAPSTSG*AELPCQLPGTG Trigger: CCCAGTTCCAGGAAGCTGACATGGGAGCTCAGCCAACCCTGACGTGGAAGGGGCACCCAGCTTGGGGATTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGAGAATGCAAAAGCAGGTCACTGGCTGGCGACAGACAGGAGGACTCCCACCAGGCCAAAGTTGGTaGCTCCCCCGCCTCCGATCA | + |
|
Preference number: 4 (lower is better) Translates to: TRRMQKQVTGWRQTGGLPPGQSW*LPRLRS Trigger: TGATCGGAGGCGGGGGAGCCACCAACTTTGGCCTGG...TGGGAGTCCTCCTGTCTGTCGCCAGCCAGTGACCTGCTTTTGCATTCTCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | ACATTGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCTCTGCAGAATGTGTCCAGGCCAGGCCAAAGTTaGTGGCTCCCCCGCCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: TLCLQLELGLGASLQNVSRPGQS*WLPRLR Trigger: TCGGAGGCGGGGGAGCCACCAACTTTGGCCTGGCCT...GGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | ATCACCCTGCACAAGGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTGGAGGAATTCCCACAGCCTaGATGATGCTGATGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: ITLHKVSGSLLGLPLACGGIPTA*MMLMTS Trigger: GCTGGTCATCAGCATCATCCAGGCTGTGGGAATTCC...TCCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGGGTGAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR TCA 90 bp | GCATCACCACTGCTGAGCCGATGTTCGTCCCGAAGAAGGAAATGGTGGCAATCCGGCGCTTGGTCAAGCTaGGATGCTGAGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: ASPLLSRCSSRRRKWWQSGAWSS*DAEEGC Trigger: ACATCCCTCCTCAGCATCTCAGCTTGACCAAGCGCC...GGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTCAGCAGTGGTGATGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| CDS-3UTR GCA 90 bp | CAGCGACCAATGATGCCCTCTGTTCCACCACGGCCTTTACACCTGGCAAGTGCCCTGAGGAGGGATGTCTaGCTCGAAGTCTTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: QRPMMPSVPPRPLHLASALRRDV*LEVLVE Trigger: TTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAG...GGCACTTGCCAGGTGTAAAGGCCGTGGTGGAACAGAGGGCATCATTGGTCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR GCA 90 bp | GAGCCGATGTTCGTCCCGAAGAAGGAAATGGTGGCAATCCAGCCGCAGACACCCCTGAGGAGGGATGTCTaGCTCGAAGTCTTGGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: EPMFVPKKEMVAIQPQTPLRRDV*LEVLVE Trigger: TTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAG...GGGTGTCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| 3UTR CAA 72 bp | TCCTGCCAACCAGGAATCCTACTCAGGACATTGTGCTaGCAGCTTGAACTGGGCCTGGGAGCATCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SCQPGILLRTLC*QLELGLGASLQ Trigger: CTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGCAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| 3UTR CAA 72 bp | CCTTCCTCCTGCCAACCAGGAATCCTACTCAGGACATaGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSCQPGILLRT*CLQLELGLGAS Trigger: AGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGTCCTGAGTAGGATTCCTGGTTGGCAGGAGGAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR TCA 90 bp | GAGTGGCAGAATACTGAGTCTGCGGTTGATTCATGGCACCCTGAGCAGCCCCCAATGGCTTCAGTGGGATaGATTTGGGCAATGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: EWQNTESAVDSWHPEQPPMASVG*IWAMVG Trigger: TCCCACCATTGCCCAAATTCATCCCACTGAAGCCAT...TGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTCAGTATTCTGCCACTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGGACAAGGGAGACTGGAGAGGTGAACTACCCTCTCAATGGGTCCTATTTGTGCCTGCTGCACATGTaGGTTCTTCCACGCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ARTRETGEVNYPLNGSYLCLLHM*VLPRSS Trigger: ACTGGAGCGTGGAAGAACCCACATGTGCAGCAGGCA...CAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCCAGTCTCCCTTGTCCTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | CCACGCTCCAGTGGTCCATTCCTCCTGAGCCTTGCTGAAACTGCCTCCGCTACCGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSSGPFLLSLAETASATEFGQW*EVVHFL Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...GGTAGCGGAGGCAGTTTCAGCAAGGCTCAGGAGGAATGGACCACTGGAGCGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGAACTACCCTCTCAATGGGTCCTATTTGACTTCTCCTCAGATCTTCGTCAAGCTGAGATGCTaGGGAGGGATGTCTGCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: GEVNYPLNGSYLTSPQIFVKLRC*GGMSAS Trigger: CGAGGCAGACATCCCTCCTCAGCATCTCAGCTTGAC...GAAGATCTGAGGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR TCA 90 bp | ACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAAGGCGCTTGGTCAAGCTaGGATGCTGAGGAGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: TNVVWFSSLPSLGGFLLQGAWSS*DAEEGC Trigger: ACATCCCTCCTCAGCATCTCAGCTTGACCAAGCGCC...TTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR TCA 90 bp | GGAGAGGTGAACTACCCTCTCAATGGGTCCTATTTGACTTCTCCTCAGATCTTCGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GEVNYPLNGSYLTSPQIFGSRPA*RCSTSR Trigger: TCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACC...GAAGATCTGAGGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR GCA 90 bp | GAGCTCCCATGTCAGCTTCCTGGAACTGGGGAGCGGATTGGGGGTATCTGGGTAGAAGGTGAAGAAGAATaGCATGAAGCTGAAGGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ELPCQLPGTGERIGGIWVEGEEE*HEAEGT Trigger: AGTTCCTTCAGCTTCATGGCATTCTTCTTCACCTTC...TACCCAGATACCCCCAATCCGCTCCCCAGTTCCAGGAAGCTGACATGGGAGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR CCA 90 bp | ACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAATCTGCGGTTGATTCATaGCACCCTGAGCAGCCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TNVVWFSSLPSLGGFLLQSAVDS*HPEQPP Trigger: TGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGA...TTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTTGTGTCTCTCAGAAACAAATGGCTTCAGTGGGATaGATTTGGGCAATGGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSGRSTANEGIVCVSQKQMASVG*IWAMVG Trigger: TCCCACCATTGCCCAAATTCATCCCACTGAAGCCAT...TTGTTTCTGAGAGACACAAACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR TCA 90 bp | GGAGAGGTGAACTACCCTCTCAATGGGTCCTATTTGACTTCTCCTCAGATCTTCGTGGTCCATTCCTCCTaGGCCTTGCTGAAACTGCCT | + |
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Preference number: 4 (lower is better) Translates to: GEVNYPLNGSYLTSPQIFVVHSS*ALLKLP Trigger: AGGCAGTTTCAGCAAGGCTCAGGAGGAATGGACCAC...GAAGATCTGAGGAGAAGTCAAATAGGACCCATTGAGAGGGTAGTTCACCTCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | ACATTGTGCTTGCAGCTTGAACTGGGCCTGGGAGCATCTCTGCAGAATGTGTCCGAAACATGGCTTCAGTaGGATGAATTTGGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: TLCLQLELGLGASLQNVSETWLQ*DEFGQW Trigger: CCATTGCCCAAATTCATCCCACTGAAGCCATGTTTC...GGACACATTCTGCAGAGATGCTCCCAGGCCCAGTTCAAGCTGCAAGCACAATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | AAAGTTCCCAGAGGACCCAAAGGTGGGGGCAGGGATAGACATATACATATACGTTCCCGAAGAAGGAAATaGTGGCAATCCAGCCGCAGA | + |
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Preference number: 4 (lower is better) Translates to: KVPRGPKGGGRDRHIHIRSRRRK*WQSSRR Trigger: TCTGCGGCTGGATTGCCACCATTTCCTTCTTCGGGA...ACGTATATGTATATGTCTATCCCTGCCCCCACCTTTGGGTCCTCTGGGAACTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR TCA 90 bp | CGCTGTTCACTAGAAGATCCTAGAAGTCATATCACTCAGTCACACCCAGCAGAGATGGCTTCAGTGGGATaGATTTGGGCAATGGTGGGA | + |
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Preference number: 4 (lower is better) Translates to: RCSLEDPRSHITQSHPAEMASVG*IWAMVG Trigger: TCCCACCATTGCCCAAATTCATCCCACTGAAGCCAT...CTCTGCTGGGTGTGACTGAGTGATATGACTTCTAGGATCTTCTAGTGAACAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR TCA 90 bp | ATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAATGTCAAGCTGAGATGCTaGGGAGGGATGTCTGCCTCG | + |
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Preference number: 4 (lower is better) Translates to: ISLSHTQQRSKDSSFDRNVKLRC*GGMSAS Trigger: CGAGGCAGACATCCCTCCTCAGCATCTCAGCTTGAC...ATTTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR TCA 90 bp | ATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAATGGCGCTTGGTCAAGCTaGGATGCTGAGGAGGGATGT | + |
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Preference number: 4 (lower is better) Translates to: ISLSHTQQRSKDSSFDRNGAWSS*DAEEGC Trigger: ACATCCCTCCTCAGCATCTCAGCTTGACCAAGCGCC...ATTTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR GCA 90 bp | CGCTGTTCACTAGAAGATCCTAGAAGTCATATCACTCAGTCACACCCAGCAGAGCTGAGGAGGGATGTCTaGCTCGAAGTCTTGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RCSLEDPRSHITQSHPAELRRDV*LEVLVE Trigger: TTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAG...CTCTGCTGGGTGTGACTGAGTGATATGACTTCTAGGATCTTCTAGTGAACAGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR CCA 90 bp | GCATCACCACTGCTGAGCCGATGTTCGTCCCGAAGAAGGAAATGGTGGCAATCCGTCTTGGTAGAAACATaGCTTCAGTGGGATGAATTT | + |
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Preference number: 4 (lower is better) Translates to: ASPLLSRCSSRRRKWWQSVLVET*LQWDEF Trigger: AAATTCATCCCACTGAAGCCATGTTTCTACCAAGAC...GGATTGCCACCATTTCCTTCTTCGGGACGAACATCGGCTCAGCAGTGGTGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| CDS-3UTR TCA 90 bp | TTTCTGCCAGACTCAATTAGAACAGCTACTCCTTCCAGGAATCCAGTGGTCACTAGGAACTGTCTGTCTTaGAGGCCTTGTAAATGGGCC | + |
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Preference number: 4 (lower is better) Translates to: FLPDSIRTATPSRNPVVTRNCLS*RPCKWA Trigger: GGCCCATTTACAAGGCCTTCAAGACAGACAGTTCCT...AGTGACCACTGGATTCCTGGAAGGAGTAGCTGTTCTAATTGAGTCTGGCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | GTTACACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VTQIDTGSGRSTANEGIVEFGQW*EVVHFL Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...AACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | ATGATCCCTTTATTATATTCATCCAGTTACACAGATAGACACTGGCTCGGGCAGTCTTCCACGCTCCAGTaGTCCATTCCTCCTGAGCCT | + |
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Preference number: 4 (lower is better) Translates to: MIPLLYSSSYTDRHWLGQSSTLQ*SIPPEP Trigger: AGGCTCAGGAGGAATGGACCACTGGAGCGTGGAAGA...CTGCCCGAGCCAGTGTCTATCTGTGTAACTGGATGAATATAATAAAGGGATCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | ACCAATGTGGTATGGTTTTCCAGTCTCCCTAGCCTAGGTGGGTTTCTGTTGCAATGGAGTACGTGTAGTTaGGAGTGGCAGAATACTGAG | + |
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Preference number: 4 (lower is better) Translates to: TNVVWFSSLPSLGGFLLQWSTCS*EWQNTE Trigger: CTCAGTATTCTGCCACTCCCAACTACACGTACTCCA...TTGCAACAGAAACCCACCTAGGCTAGGGAGACTGGAAAACCATACCACATTGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | GTTACACAGATAGACACTGGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTGTCTTGGTAGAAACATaGCTTCAGTGGGATGAATTT | + |
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Preference number: 4 (lower is better) Translates to: VTQIDTGSGRSTANEGIVVLVET*LQWDEF Trigger: AAATTCATCCCACTGAAGCCATGTTTCTACCAAGAC...AACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCCAGTGTCTATCTGTGTAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | TCATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAGAAACATGGCTTCAGTaGGATGAATTTGGGCAATGG | + |
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Preference number: 4 (lower is better) Translates to: SYHSVTPSRGLKTLPLTEETWLQ*DEFGQW Trigger: CCATTGCCCAAATTCATCCCACTGAAGCCATGTTTC...TTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATATGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR CCA 90 bp | TCATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAGAATTTGGGCAATGGTaGGAAGTTGTTCACTTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SYHSVTPSRGLKTLPLTEEFGQW*EVVHFL Trigger: GAGAAAGTGAACAACTTCCCACCATTGCCCAAATTC...TTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| 3UTR CAA 72 bp | AGAGGAATAAGATACCAGACAATGTCCACACCCTGCTaGAAAGATACAGTCCCAGGAACTAAGATCAGTCTA | + |
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Preference number: 4 (lower is better) Translates to: RGIRYQTMSTPC*KDTVPGTKISL Trigger: TAGACTGATCTTAGTTCCTGGGACTGTATCTTTCAAGCAGGGTGTGGACATTGTCTGGTATCTTATTCCTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CCA 90 bp | TCATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAGTCTTGGTAGAAACATaGCTTCAGTGGGATGAATTT | + |
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Preference number: 4 (lower is better) Translates to: SYHSVTPSRGLKTLPLTEVLVET*LQWDEF Trigger: AAATTCATCCCACTGAAGCCATGTTTCTACCAAGAC...TTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR CAA 90 bp | CACTGGCTGGCGACAGACAGGAGGACTCCCAGCATCCACCAGGCCCTCCCACCCTTCAGTGGGATGAATTaGGGCAATGGTGGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: HWLATDRRTPSIHQALPPFSGMN*GNGGKL Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCACTGAA...GGGTGGGAGGGCCTGGTGGATGCTGGGAGTCCTCCTGTCTGTCGCCAGCCAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS TCA 90 bp | CACCCAGGTCCTCAGACCTCAGAGAGCCCTTCCTCGAACCCTGGATaGGGCTCCGAAGACACATCCAGAGGTAGTAGAGGCGCTTGGTCA | + |
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Preference number: 5 (lower is better) Translates to: HPGPQTSESPSSNPG*GSEDTSRGSRGAWS Trigger: TGACCAAGCGCCTCTACTACCTCTGGATGTGTCTTCGGAGCCTCATCCAGGGTTCGAGGAAGGGCTCTCTGAGGTCTGAGGACCTGGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR CAA 90 bp | CATCACCCTGCACAAGGTATCTGGCTCCCTGCTAGGCCTCCCCCTGGCCTGTGGGTCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: HHPAQGIWLPARPPPGLWVCLEV*VETWLQ Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAC...CCACAGGCCAGGGGGAGGCCTAGCAGGGAGCCAGATACCTTGTGCAGGGTGATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CAA 90 bp | GGCTCGGGCAGGTCAACTGCCAATGAGGGGATAGTTTGTGTCTCTCAGAAACAAAAGGCCAGGCCAAAGTaGGTGGCTCCCCCGCCTCCG | + |
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Preference number: 5 (lower is better) Translates to: GSGRSTANEGIVCVSQKQKARPK*VAPPPP Trigger: CGGAGGCGGGGGAGCCACCAACTTTGGCCTGGCCTT...TTGTTTCTGAGAGACACAAACTATCCCCTCATTGGCAGTTGACCTGCCCGAGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS CCA 90 bp | ACGTGTAGTTGGGAGTGGCAGAATACTGAGTCTGCGGTTGATTCATaGCACCCTGAGCAGCCCCCATGGCTGCATTCTGGGCTGCCTGCT | + |
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Preference number: 5 (lower is better) Translates to: TCSWEWQNTESAVDS*HPEQPPWLHSGLPA Trigger: AGCAGGCAGCCCAGAATGCAGCCATGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTCAGTATTCTGCCACTCCCAACTACACGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046587.8 ENSMUST00000214256.2 |
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| CDS GCA 90 bp | GTAGTAGAGGCGCTTGGTCAAGCTGAGATGCTGAGGAGGGATGTCTaGCTCGAAGTCTTGGTAGAAACATGGCTTCAGTGGGATGAATTT | + |
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Preference number: 5 (lower is better) Translates to: VVEALGQAEMLRRDV*LEVLVETWLQWDEF Trigger: AAATTCATCCCACTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAGCATCTCAGCTTGACCAAGCGCCTCTACTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046587.8 ENSMUST00000213771.2 ENSMUST00000214256.2 ENSMUST00000215059.2 ENSMUST00000215734.2 |
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| CDS-3UTR CAA 90 bp | CTATCCTTTCTGCCAGACTCAATTAGAACAGCTACTCCTTCCAGGAATCCAGTGATACTGAGTCTGCGGTaGATTCATGGCACCCTGAGC | + |
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Preference number: 5 (lower is better) Translates to: LSFLPDSIRTATPSRNPVILSLR*IHGTLS Trigger: GCTCAGGGTGCCATGAATCAACCGCAGACTCAGTAT...CACTGGATTCCTGGAAGGAGTAGCTGTTCTAATTGAGTCTGGCAGAAAGGATAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000046587.8 |
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| CDS-3UTR CAA 90 bp | ACCATGCTAAGAGCAATGAAGGAAAAGACGGCCACAACTGTGAACATGACCGTGTTCAGTGGGATGAATTaGGGCAATGGTGGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: TMLRAMKEKTATTVNMTVFSGMN*GNGGKL Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCACTGAA...CACGGTCATGTTCACAGTTGTGGCCGTCTTTTCCTTCATTGCTCTTAGCATGGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000215734.2 |
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| CDS GCA 90 bp | CTGGATGATGCTGATGACCAGCTGAGCCATGAAGGTGAAGAAGAATaGCATGAAGCTGAAGGAACTGTCTGTCTTGAAGGCCTTGTAAAT | + |
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Preference number: 5 (lower is better) Translates to: LDDADDQLSHEGEEE*HEAEGTVCLEGLVN Trigger: ATTTACAAGGCCTTCAAGACAGACAGTTCCTTCAGCTTCATGGCATTCTTCTTCACCTTCATGGCTCAGCTGGTCATCAGCATCATCCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046587.8 ENSMUST00000214256.2 |
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| CDS-3UTR CAA 90 bp | TCATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAATTCAGTGGGATGAATTaGGGCAATGGTGGGAAGTTG | + |
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Preference number: 5 (lower is better) Translates to: SYHSVTPSRGLKTLPLTEFSGMN*GNGGKL Trigger: CAACTTCCCACCATTGCCCAAATTCATCCCACTGAA...TTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS-3UTR CAA 90 bp | ATATCACTCAGTCACACCCAGCAGAGGTCTAAAGACTCTTCCTTTGACAGAAATGTCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: ISLSHTQQRSKDSSFDRNVCLEV*VETWLQ Trigger: CTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGAC...ATTTCTGTCAAAGGAAGAGTCTTTAGACCTCTGCTGGGTGTGACTGAGTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS TCA 72 bp | GCCACGCGAGACAGCCCACCAGGTTCACGGCCAGCGTaGCGCTGTTCAACATCCAGAGGTAGTAGAGGCGCT | + |
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Preference number: 6 (lower is better) Translates to: ATRDSPPGSRPA*RCSTSRGSRGA Trigger: AGCGCCTCTACTACCTCTGGATGTTGAACAGCGTCACGCTGGCCGTGAACCTGGTGGGCTGTCTCGCGTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046587.8 ENSMUST00000214256.2 |
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| CDS TCA 72 bp | CCTCAGACCTCAGAGAGCCCTTCCTCGAACCCTGGATaGGGCTCCGAAGACACATCCAGAGGTAGTAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: PQTSESPSSNPG*GSEDTSRGSRG Trigger: GCCTCTACTACCTCTGGATGTGTCTTCGGAGCCTCATCCAGGGTTCGAGGAAGGGCTCTCTGAGGTCTGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000213771.2 |
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| CDS CCA 72 bp | TGGGAGTGGCAGAATACTGAGTCTGCGGTTGATTCATaGCACCCTGAGCAGCCCCCATGGCTGCATTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: WEWQNTESAVDS*HPEQPPWLHSG Trigger: CCCAGAATGCAGCCATGGGGGCTGCTCAGGGTGCCATGAATCAACCGCAGACTCAGTATTCTGCCACTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046587.8 ENSMUST00000214256.2 |
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| CDS GCA 72 bp | GCGCTTGGTCAAGCTGAGATGCTGAGGAGGGATGTCTaGCTCGAAGTCTTGGTAGAAACATGGCTTCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: ALGQAEMLRRDV*LEVLVETWLQW Trigger: CCACTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAGCATCTCAGCTTGACCAAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046587.8 ENSMUST00000213771.2 ENSMUST00000214256.2 ENSMUST00000215059.2 ENSMUST00000215734.2 |
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| CDS CAA 90 bp | CTTGGTCAAGCTGAGATGCTGAGGAGGGATGTCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAGTGGGATGAATTTGGGCAATGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LGQAEMLRRDVCLEV*VETWLQWDEFGQWW Trigger: CCACCATTGCCCAAATTCATCCCACTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAGCATCTCAGCTTGACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046587.8 ENSMUST00000213771.2 ENSMUST00000214256.2 ENSMUST00000215059.2 ENSMUST00000215734.2 |
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| CDS CAA 72 bp | GCTGAGATGCTGAGGAGGGATGTCTGCCTCGAAGTCTaGGTAGAAACATGGCTTCAGTGGGATGAATTTGGG | + |
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Preference number: 6 (lower is better) Translates to: AEMLRRDVCLEV*VETWLQWDEFG Trigger: CCCAAATTCATCCCACTGAAGCCATGTTTCTACCAAGACTTCGAGGCAGACATCCCTCCTCAGCATCTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000046587.8 ENSMUST00000213771.2 ENSMUST00000214256.2 ENSMUST00000215059.2 ENSMUST00000215734.2 |
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