Pregenerated sensors for SCAMP4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000113949Ensembl transcript IDs: ENSMUST00000079883.12, ENSMUST00000180350.3, ENSMUST00000220669.2, ENSMUST00000223256.2
Found 85 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCTaGAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTGGTGGAGGGG | + |
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Preference number: 1 (lower is better) Translates to: GLPAARAPSTKWIRV*KWAKAYSGSWVVEG Trigger: CCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR GCA 90 bp | CATAACCACAGCAGCCCCAACACTGGTCCCAAAGAAGCCAACAGCTaGCAGCCAACCACATGCGCCCCAGCCCGAGAAGCCAATGGCCTG | + |
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Preference number: 1 (lower is better) Translates to: HNHSSPNTGPKEANS*QPTTCAPAREANGL Trigger: CAGGCCATTGGCTTCTCGGGCTGGGGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTTGGGACCAGTGTTGGGGCTGCTGTGGTTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR CCA 90 bp | CCGGCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCTGCAAGTaGGCAAAGGCCTATTCAGGATCCTGGGTGGTGGAGGGGACAGCA | + |
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Preference number: 1 (lower is better) Translates to: PAARAPSTKWIRVCK*AKAYSGSWVVEGTA Trigger: TGCTGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | AGAGAGGGAGGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTaGATCAGGGTCTGCAAGTGGGCAAAGGCCTATTCAGGATCCTGG | + |
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Preference number: 1 (lower is better) Translates to: REGGGLPAARAPSTK*IRVCKWAKAYSGSW Trigger: CCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCCTCCCTCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | GGCTCTTCTGGCAAGGCCACAGCTACCCCGGGAAGGCAGAGGGTGTaGGGAGAAGTACAGGTCTCTCTAAGGCACAGATCTGTCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: GSSGKATATPGRQRV*GEVQVSLRHRSVPA Trigger: TGCTGGGACAGATCTGTGCCTTAGAGAGACCTGTACTTCTCCCCACACCCTCTGCCTTCCCGGGGTAGCTGTGGCCTTGCCAGAAGAGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | AGGTGGGAGCAGGGCAAATCCAGCCAGGCTCTGGTAGGATGGCAGTaGACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGA | + |
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Preference number: 1 (lower is better) Translates to: RWEQGKSSQALVGWQ*TMVVGQCLLRAWAR Trigger: TCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAGAGCCTGGCTGGATTTGCCCTGCTCCCACCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | AGGCCTCTCCTTGCACAGGCTGAGGGTTTCTACCCTCTTAACAGGTaGGAGCAGGGCAAATCCAGCCAGGCTCTGGTAGGATGGCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: RPLLAQAEGFYPLNR*EQGKSSQALVGWQW Trigger: CCACTGCCATCCTACCAGAGCCTGGCTGGATTTGCCCTGCTCCCACCTGTTAAGAGGGTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | ACAGTGGGGTACTCAGGCAGGCTGTTCCCAGAGAAACTGTTAAACTaGGCCTCCCTCGATGGTGGGTTCCTCCAGGTACCAGCGCTCCAC | + |
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Preference number: 1 (lower is better) Translates to: TVGYSGRLFPEKLLN*ASLDGGFLQVPALH Trigger: GTGGAGCGCTGGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAGTTTAACAGTTTCTCTGGGAACAGCCTGCCTGAGTACCCCACTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR GCA 90 bp | AGCCAGGCTCTGGTAGGATGGCAGTGGACAATGGTTGTTGGGCAGTaGTTGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCAAGGACC | + |
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Preference number: 1 (lower is better) Translates to: SQALVGWQWTMVVGQ*LLRAWARDEHGPRT Trigger: GGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAGAGCCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR CCA 90 bp | TCAGGGTCTGCAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTGGTaGAGGGGACAGCAGGTTGTCACTGTCACAAGGGATGGGACAAGG | + |
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Preference number: 1 (lower is better) Translates to: SGSASGQRPIQDPGW*RGQQVVTVTRDGTR Trigger: CCTTGTCCCATCCCTTGTGACAGTGACAACCTGCTGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | GGATCAGGGTCTGCAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTaGTGGAGGGGACAGCAGGTTGTCACTGTCACAAGGGATGGGACA | + |
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Preference number: 1 (lower is better) Translates to: GSGSASGQRPIQDPG*WRGQQVVTVTRDGT Trigger: TGTCCCATCCCTTGTGACAGTGACAACCTGCTGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | AGGCAGGCTGTTCCCAGAGAAACTGTTAAACTGGGCCTCCCTCGATaGTGGGTTCCTCCAGGTACCAGCGCTCCACTCTGTCTGTGCCTT | + |
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Preference number: 1 (lower is better) Translates to: RQAVPRETVKLGLPR*WVPPGTSAPLCLCL Trigger: AAGGCACAGACAGAGTGGAGCGCTGGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAGTTTAACAGTTTCTCTGGGAACAGCCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR TCA 90 bp | GACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGATaGACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAG | + |
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Preference number: 1 (lower is better) Translates to: DNGCWAVLAEGLGKR*TWAKDLLGPLRDAQ Trigger: CTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR GCA 90 bp | CAAGAGATGAACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATaGTCAGACCTCAGGACCGAGGGTGGTAACAGGAGACAGAGCCAT | + |
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Preference number: 1 (lower is better) Translates to: QEMNMGQGPPGTLER*SDLRTEGGNRRQSH Trigger: ATGGCTCTGTCTCCTGTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR CCA 90 bp | AAGTGGATCAGGGTCTGCAAGTGGGCAAAGGCCTATTCAGGATCCTaGGTGGTGGAGGGGACAGCAGGTTGTCACTGTCACAAGGGATGG | + |
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Preference number: 1 (lower is better) Translates to: KWIRVCKWAKAYSGS*VVEGTAGCHCHKGW Trigger: CCATCCCTTGTGACAGTGACAACCTGCTGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 90 bp | CAGAGTTTGGCTTTATACATCTCAGCAACACAAAGGACAGGCGCTTaGAGGTTGAGGCCTCTCCTTGCACAGGCTGAGGGTTTCTACCCT | + |
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Preference number: 1 (lower is better) Translates to: QSLALYISATQRTGA*RLRPLLAQAEGFYP Trigger: AGGGTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGTATAAAGCCAAACTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR TCA 90 bp | TGGCTTTATACATCTCAGCAACACAAAGGACAGGCGCTTGGAGGTTaGGGCCTCTCCTTGCACAGGCTGAGGGTTTCTACCCTCTTAACA | + |
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Preference number: 1 (lower is better) Translates to: WLYTSQQHKGQALGG*GLSLHRLRVSTLLT Trigger: TGTTAAGAGGGTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGTATAAAGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CAA 90 bp | CTGCAGGGAGTGAAGAGAACCAGCCAGAGCAAGGCCAGGCCAAAATaGGCACCAGCTCCGCCCGCAATCCACCAGGCCAGGCAGGCCACC | + |
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Preference number: 2 (lower is better) Translates to: LQGVKRTSQSKARPK*APAPPAIHQARQAT Trigger: GGTGGCCTGCCTGGCCTGGTGGATTGCGGGCGGAGCTGGTGCCAATTTTGGCCTGGCCTTGCTCTGGCTGGTTCTCTTCACTCCCTGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223256.2 |
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| 3UTR-3UTR TCA 90 bp | AGAGGGAGGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCAGCCACCATGCTCCTaGCTGTCCACTCACACCCAT | + |
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Preference number: 2 (lower is better) Translates to: RGRGSPGSQSTLNQVDQGQPPCS*LSTHTH Trigger: ATGGGTGTGAGTGGACAGTCAGGAGCATGGTGGCTG...ACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCCTCCCTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR-3UTR CCA 90 bp | CCCACAGAGAGGGAGGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGACTGGTAGGATGGCAGTaGACAATGGTTGTTGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: PTEREGVSRQPEHPQPSGLVGWQ*TMVVGQ Trigger: CTGCCCAACAACCATTGTCCACTGCCATCCTACCAG...TCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCCTCCCTCTCTGTGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR-3UTR CCA 90 bp | ATGGCGTGTGGGTGCACATACCCAGGGGTGAACAGGGAAGAGCCGCAGGTGGCTATCTCCATGACACGATaGGGTAGAGGGCAGGTGCCC | + |
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Preference number: 2 (lower is better) Translates to: MACGCTYPGVNREEPQVAISMTR*GRGQVP Trigger: GGGCACCTGCCCTCTACCCCATCGTGTCATGGAGAT...AGCCACCTGCGGCTCTTCCCTGTTCACCCCTGGGTATGTGCACCCACACGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR-3UTR CCA 90 bp | GGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCTGCAAGTGGTGCTTGCTGAGGGCTTaGGCAAGAGATGAACATGGG | + |
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Preference number: 2 (lower is better) Translates to: GLPAARAPSTKWIRVCKWCLLRA*ARDEHG Trigger: CCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCA...CCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CAA 90 bp | CAGGCTCTGGTAGGATGGCAGTGGACAATGGTTGTTGGGCAGTGCTaGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCAAGGACCTCC | + |
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Preference number: 2 (lower is better) Translates to: QALVGWQWTMVVGQC*LRAWARDEHGPRTS Trigger: GGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAGAGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR-3UTR GCA 90 bp | ACGGCCATCACAAGGGCGGACAAGGAAAACAGGATGGCCGGGACCAGCATAACCAAAGAAGCCAACAGCTaGCAGCCAACCACATGCGCC | + |
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Preference number: 2 (lower is better) Translates to: TAITRADKENRMAGTSITKEANS*QPTTCA Trigger: GGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTT...GGTTATGCTGGTCCCGGCCATCCTGTTTTCCTTGTCCGCCCTTGTGATGGCCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR-3UTR CCA 90 bp | CAACACTGGTCCCAAAGAAGCCAACAGCTGCCAGCCAACCACATGCGCCCCAGCACAGTCAGCACAAACTaGGCTCCAAAGATGAAGAAG | + |
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Preference number: 2 (lower is better) Translates to: QHWSQRSQQLPANHMRPSTVSTN*APKMKK Trigger: CTTCTTCATCTTTGGAGCCCAGTTTGTGCTGACTGT...GCTGGGGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTTGGGACCAGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR CAA 90 bp | TTGGCTTTATACATCTCAGCAACACAAAGGACAGGCGCTTGGAGGTaGAGGCCTCTCCTTGCACAGGCTGAGGGTTTCTACCCTCTTAAC | + |
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Preference number: 2 (lower is better) Translates to: LALYISATQRTGAWR*RPLLAQAEGFYPLN Trigger: GTTAAGAGGGTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGTATAAAGCCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CAA 90 bp | AGGCCTGGTGACTTGGCTGGTAACATCGGGTCACAAGGAAGAATATaGAGTCCAATGTCATCAGAGGTGCTGTGGACACTCCAAAACTCA | + |
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Preference number: 2 (lower is better) Translates to: RPGDLAGNIGSQGRI*SPMSSEVLWTLQNS Trigger: TGAGTTTTGGAGTGTCCACAGCACCTCTGATGACATTGGACTCAATATTCTTCCTTGTGACCCGATGTTACCAGCCAAGTCACCAGGCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR GCA 72 bp | CTGCCAGGTAGCAGAGCCTGTTCCTCTCCCACCAGTTaGCCACAGAGAGGGAGGGGGTCTCCCGGCAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LPGSRACSSPTS*PQRGRGSPGSQ Trigger: CTGGCTGCCGGGAGACCCCCTCCCTCTCTGTGGGCAACTGGTGGGAGAGGAACAGGCTCTGCTACCTGGCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR GCA 72 bp | AGCAGCCCCAACACTGGTCCCAAAGAAGCCAACAGCTaGCAGCCAACCACATGCGCCCCAGCCCGAGAAGCC | + |
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Preference number: 3 (lower is better) Translates to: SSPNTGPKEANS*QPTTCAPAREA Trigger: GGCTTCTCGGGCTGGGGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTTGGGACCAGTGTTGGGGCTGCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR-3UTR CAA 90 bp | CCCACAGAGAGGGAGGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGAGGAGGGGACAGCAGGTaGTCACTGTCACAAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: PTEREGVSRQPEHPQPSGGGDSR*SLSQGM Trigger: CATCCCTTGTGACAGTGACAACCTGCTGTCCCCTCC...TCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCCTCCCTCTCTGTGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR-3UTR CAA 90 bp | TGTCGGCTCGGAAGGCCTTGTATGCAGGCCGGAACCAGCACACATAACTGCAGGAAGGCCAGGCCAAAATaGGCACCAGCTCCGCCCGCA | + |
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Preference number: 3 (lower is better) Translates to: CRLGRPCMQAGTSTHNCRKARPK*APAPPA Trigger: TGCGGGCGGAGCTGGTGCCAATTTTGGCCTGGCCTT...CCTGCAGTTATGTGTGCTGGTTCCGGCCTGCATACAAGGCCTTCCGAGCCGACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000223256.2 |
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| 3UTR CCA 72 bp | GGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTaGATCAGGGTCTGCAAGTGGGCAAAGGCCTATTCA | + |
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Preference number: 3 (lower is better) Translates to: GGLPAARAPSTK*IRVCKWAKAYS Trigger: TGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR TCA 72 bp | GGTGTTACCCATGGCGGGCACTTGACTCCATCTCCATaGCACGATGGGGTAGAGGGCAGGTGCCCCAACAGT | + |
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Preference number: 3 (lower is better) Translates to: GVTHGGHLTPSP*HDGVEGRCPNS Trigger: ACTGTTGGGGCACCTGCCCTCTACCCCATCGTGTCATGGAGATGGAGTCAAGTGCCCGCCATGGGTAACACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR TCA 72 bp | TGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGATaGACATGGGCCAAGGACCTCCTGGGACCCTTGAGA | + |
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Preference number: 3 (lower is better) Translates to: CWAVLAEGLGKR*TWAKDLLGPLR Trigger: TCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR GCA 72 bp | AACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATaGTCAGACCTCAGGACCGAGGGTGGTAACAGGAGA | + |
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Preference number: 3 (lower is better) Translates to: NMGQGPPGTLER*SDLRTEGGNRR Trigger: TCTCCTGTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR GCA 72 bp | GCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCTaGAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTG | + |
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Preference number: 3 (lower is better) Translates to: AARAPSTKWIRV*KWAKAYSGSWV Trigger: CACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 72 bp | CAGGGCAAATCCAGCCAGGCTCTGGTAGGATGGCAGTaGACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCT | + |
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Preference number: 3 (lower is better) Translates to: QGKSSQALVGWQ*TMVVGQCLLRA Trigger: AGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAGAGCCTGGCTGGATTTGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 72 bp | GTGGAGGGGACAGCAGGTTGTCACTGTCACAAGGGATaGGACAAGGAAGTAGCAGGGTCCAGAGGAGCACAG | + |
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Preference number: 3 (lower is better) Translates to: VEGTAGCHCHKG*DKEVAGSRGAQ Trigger: CTGTGCTCCTCTGGACCCTGCTACTTCCTTGTCCCATCCCTTGTGACAGTGACAACCTGCTGTCCCCTCCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR TCA 72 bp | CAACCACATGCGCCCCAGCCCGAGAAGCCAATGGCCTaGATGACAGTCAGCACAAACTGGGCTCCAAAGATG | + |
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Preference number: 3 (lower is better) Translates to: QPHAPQPEKPMA*MTVSTNWAPKM Trigger: CATCTTTGGAGCCCAGTTTGTGCTGACTGTCATTCAGGCCATTGGCTTCTCGGGCTGGGGCGCATGTGGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR CCA 72 bp | CTTGCACAGGCTGAGGGTTTCTACCCTCTTAACAGGTaGGAGCAGGGCAAATCCAGCCAGGCTCTGGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: LAQAEGFYPLNR*EQGKSSQALVG Trigger: TCCTACCAGAGCCTGGCTGGATTTGCCCTGCTCCCACCTGTTAAGAGGGTAGAAACCCTCAGCCTGTGCAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 72 bp | GTTCCCAGAGAAACTGTTAAACTGGGCCTCCCTCGATaGTGGGTTCCTCCAGGTACCAGCGCTCCACTCTGT | + |
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Preference number: 3 (lower is better) Translates to: VPRETVKLGLPR*WVPPGTSAPLC Trigger: ACAGAGTGGAGCGCTGGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAGTTTAACAGTTTCTCTGGGAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR TCA 72 bp | ACATCTCAGCAACACAAAGGACAGGCGCTTGGAGGTTaGGGCCTCTCCTTGCACAGGCTGAGGGTTTCTACC | + |
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Preference number: 3 (lower is better) Translates to: TSQQHKGQALGG*GLSLHRLRVST Trigger: GGTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR TCA 72 bp | GCAGAACAGAGGATTCAGGCACAGCCACCATGCTCCTaGCTGTCCACTCACACCCATCTACACAAGCGCTCA | + |
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Preference number: 3 (lower is better) Translates to: AEQRIQAQPPCS*LSTHTHLHKRS Trigger: TGAGCGCTTGTGTAGATGGGTGTGAGTGGACAGTCAGGAGCATGGTGGCTGTGCCTGAATCCTCTGTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR GCA 72 bp | CTGGTAGGATGGCAGTGGACAATGGTTGTTGGGCAGTaGTTGCTGAGGGCTTGGGCAAGAGATGAACATGGG | + |
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Preference number: 3 (lower is better) Translates to: LVGWQWTMVVGQ*LLRAWARDEHG Trigger: CCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR CCA 72 bp | TCATCAGAGGTGCTGTGGACACTCCAAAACTCAGATTaGCTCTTCTGGCAAGGCCACAGCTACCCCGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: SSEVLWTLQNSD*LFWQGHSYPGK Trigger: CTTCCCGGGGTAGCTGTGGCCTTGCCAGAAGAGCCAATCTGAGTTTTGGAGTGTCCACAGCACCTCTGATGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 72 bp | TACTCAGGCAGGCTGTTCCCAGAGAAACTGTTAAACTaGGCCTCCCTCGATGGTGGGTTCCTCCAGGTACCA | + |
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Preference number: 3 (lower is better) Translates to: YSGRLFPEKLLN*ASLDGGFLQVP Trigger: TGGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAGTTTAACAGTTTCTCTGGGAACAGCCTGCCTGAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| 3UTR CCA 72 bp | GCTTTATACATCTCAGCAACACAAAGGACAGGCGCTTaGAGGTTGAGGCCTCTCCTTGCACAGGCTGAGGGT | + |
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Preference number: 3 (lower is better) Translates to: ALYISATQRTGA*RLRPLLAQAEG Trigger: ACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGTATAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR GCA 72 bp | TATTCTCACATAACAAAACCAACTATGGCGTGTGGGTaGACATACCCAGGGGTGAACAGGGAAGAGCCGCAG | + |
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Preference number: 3 (lower is better) Translates to: YSHITKPTMACG*TYPGVNREEPQ Trigger: CTGCGGCTCTTCCCTGTTCACCCCTGGGTATGTGCACCCACACGCCATAGTTGGTTTTGTTATGTGAGAATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CCA 72 bp | GTCCACTCACACCCATCTACACAAGCGCTCAGAGTTTaGCTTTATACATCTCAGCAACACAAAGGACAGGCG | + |
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Preference number: 3 (lower is better) Translates to: VHSHPSTQALRV*LYTSQQHKGQA Trigger: CGCCTGTCCTTTGTGTTGCTGAGATGTATAAAGCCAAACTCTGAGCGCTTGTGTAGATGGGTGTGAGTGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | CTGTCCCAGCAGTCCTGTGGCTGGGGGTATGGCCTGCCAGGTAGCAGAGCCTGTCAGGAAGGGAGGCAGTaGGGGGAAGTTGTTCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: LSQQSCGWGYGLPGSRACQEGRQ*GEVVLL Trigger: AAGGAGAACAACTTCCCCCCACTGCCTCCCTTCCTG...ACAGGCTCTGCTACCTGGCAGGCCATACCCCCAGCCACAGGACTGCTGGGACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | AGAGGGAGGGGGTCTCCCGGCAGCCAGAGCACCCTCAACCAAGTGGATCAGGGTCAGCAGCCCCAACACTaGTCCCAAAGAAGCCAACAG | + |
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Preference number: 4 (lower is better) Translates to: RGRGSPGSQSTLNQVDQGQQPQH*SQRSQQ Trigger: CTGTTGGCTTCTTTGGGACCAGTGTTGGGGCTGCTG...ACCCTGATCCACTTGGTTGAGGGTGCTCTGGCTGCCGGGAGACCCCCTCCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | ATGGCGTGTGGGTGCACATACCCAGGGGTGAACAGGGAAGAGCCGCAGGTGGCTTCTGTCTGTGCCTTCTaGAGGCTTCCACCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: MACGCTYPGVNREEPQVASVCAF*RLPPAP Trigger: TGGGGCTGGTGGAAGCCTCCAGAAGGCACAGACAGA...AGCCACCTGCGGCTCTTCCCTGTTCACCCCTGGGTATGTGCACCCACACGCCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | AACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGGCCTCCCTCGATGGTaGGTTCCTCCAGGTACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NMGQGPPGTLERCSDLRTGLPRW*VPPGTS Trigger: GCTGGTACCTGGAGGAACCCACCATCGAGGGAGGCC...GGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | GGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAACCGCTGGACGAGTAGCTaGGGACAGTGGGGTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GPPGTLERCSDLRTEGGNRWTSS*GQWGTQ Trigger: CTGAGTACCCCACTGTCCCCAGCTACTCGTCCAGCG...GTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR GCA 90 bp | CCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAACAGGGCTCCACTCTGTCTGTaGCTTCTGGAGGCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: PPGTLERCSDLRTEGGNRAPLCL*LLEAST Trigger: GGTGGAAGCCTCCAGAAGGCACAGACAGAGTGGAGC...CCTGTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | TTGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCAAGGACCTCCTGGGACCCTGAAGCAGGGCTTCAGTaGCAGGAAGGGAGGCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LLRAWARDEHGPRTSWDPEAGLQ*QEGRQW Trigger: CCACTGCCTCCCTTCCTGCCACTGAAGCCCTGCTTC...AGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | GGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTCAGCAGCCCCAACACTaGTCCCAAAGAAGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: GQGPPGTLERCSDLRTEGQQPQH*SQRSQQ Trigger: CTGTTGGCTTCTTTGGGACCAGTGTTGGGGCTGCTG...ACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | GGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCAAGGACCTCCTCTGTCTGTGCCTTCTaGAGGCTTCCACCAGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GQCLLRAWARDEHGPRTSSVCAF*RLPPAP Trigger: TGGGGCTGGTGGAAGCCTCCAGAAGGCACAGACAGA...GGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | AGGGTCTGCAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTGGTGGAGGGGACACGCTGGACGAGTAGCTaGGGACAGTGGGGTACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RVCKWAKAYSGSWVVEGTRWTSS*GQWGTQ Trigger: CTGAGTACCCCACTGTCCCCAGCTACTCGTCCAGCG...TGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTGCAGACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR TCA 90 bp | GGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTCATAACTGCAGGGAGTaGAGAGAACCAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GQGPPGTLERCSDLRTEGHNCRE*REPARA Trigger: TGCTCTGGCTGGTTCTCTTCACTCCCTGCAGTTATG...ACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | CCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAACAGGCAGGAAGGGAGGCAGTaGGGGGAAGTTGTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PPGTLERCSDLRTEGGNRQEGRQ*GEVVLL Trigger: AAGGAGAACAACTTCCCCCCACTGCCTCCCTTCCTG...CCTGTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | CTGTCTGTGCCTTCTGGAGGCTTCCACCAGCCCCACGGTAGATCCTGTGCACCTCAGGAAGGGAGGCAGTaGGGGGAAGTTGTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSVPSGGFHQPHGRSCAPQEGRQ*GEVVLL Trigger: AAGGAGAACAACTTCCCCCCACTGCCTCCCTTCCTG...AGGTGCACAGGATCTACCGTGGGGCTGGTGGAAGCCTCCAGAAGGCACAGACAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000220669.2 |
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| CDS-3UTR CCA 90 bp | ATGGCAGTGGACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGACTGGGCCTCCCTCGATaGTGGGTTCCTCCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: MAVDNGCWAVLAEGLGKRLGLPR*WVPPGT Trigger: GGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAG...TCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | ATGGTTGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCACTGGGCCTCCCTCGATaGTGGGTTCCTCCAGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: MVVGQCLLRAWARDEHGPLGLPR*WVPPGT Trigger: GGTACCTGGAGGAACCCACCATCGAGGGAGGCCCAG...TGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCAT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR GCA 90 bp | AACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCAAAGAAGCCAACAGCTaGCAGCCAACCACATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: NMGQGPPGTLERCSDLRTKEANS*QPTTCA Trigger: GGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTT...GGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | CAGAACAGAGGATTCAGGCACAGCCACCATGCTCCTGACTGTCCACTCACACCCAGTAGCTGGGGACAGTaGGGTACTCAGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QNRGFRHSHHAPDCPLTPSSWGQ*GTQAGC Trigger: ACAGCCTGCCTGAGTACCCCACTGTCCCCAGCTACT...GGGTGTGAGTGGACAGTCAGGAGCATGGTGGCTGTGCCTGAATCCTCTGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR TCA 90 bp | GGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCAAGGACCTCCGAGAAGCCAATGGCCTaGATGACAGTCAGCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQCLLRAWARDEHGPRTSEKPMA*MTVSTN Trigger: GTTTGTGCTGACTGTCATTCAGGCCATTGGCTTCTC...GGAGGTCCTTGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR GCA 90 bp | GGTGTGGGGAGAAGTACAGGTCTCTCTAAGGCACAGATCTGTCCCAGCAGTCCTGCTCCACTCTGTCTGTaGCTTCTGGAGGCTTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GVGRSTGLSKAQICPSSPAPLCL*LLEAST Trigger: GGTGGAAGCCTCCAGAAGGCACAGACAGAGTGGAGC...AGGACTGCTGGGACAGATCTGTGCCTTAGAGAGACCTGTACTTCTCCCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | CAAGAGATGAACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACAGTAGCTGGGGACAGTaGGGTACTCAGGCAGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEMNMGQGPPGTLERCSDSSWGQ*GTQAGC Trigger: ACAGCCTGCCTGAGTACCCCACTGTCCCCAGCTACT...GTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR TCA 90 bp | GGGACAGCAGGTTGTCACTGTCACAAGGGATGGGACAAGGAAGTAGCAGGGTCCCATAACTGCAGGGAGTaGAGAGAACCAGCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTAGCHCHKGWDKEVAGSHNCRE*REPARA Trigger: TGCTCTGGCTGGTTCTCTTCACTCCCTGCAGTTATG...GGACCCTGCTACTTCCTTGTCCCATCCCTTGTGACAGTGACAACCTGCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR GCA 90 bp | ATGGCAGTGGACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCTTGGGCAAGAGAAAAGAAGCCAACAGCTaGCAGCCAACCACATGCGCC | + |
|
Preference number: 4 (lower is better) Translates to: MAVDNGCWAVLAEGLGKRKEANS*QPTTCA Trigger: GGCGCATGTGGTTGGCTGGCAGCTGTTGGCTTCTTT...TCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | GGCCTTGTATGCAGGCCGGAACCAGCACACATAACTGCAGGGAGTGAAGAGAACCAGGAAGGGAGGCAGTaGGGGGAAGTTGTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GLVCRPEPAHITAGSEENQEGRQ*GEVVLL Trigger: AAGGAGAACAACTTCCCCCCACTGCCTCCCTTCCTG...GTTCTCTTCACTCCCTGCAGTTATGTGTGCTGGTTCCGGCCTGCATACAAGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000223256.2 |
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| CDS-3UTR CCA 90 bp | GGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAACGGTTCACACCCAGAGTaGCACAGTAAAACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: GPPGTLERCSDLRTEGGNGSHPE*HSKTST Trigger: TGTGGATGTTTTACTGTGCCACTCTGGGTGTGAACC...GTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | CAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTGGTTCACACCCAGAGTaGCACAGTAAAACATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGPPGTLERCSDLRTEGGGSHPE*HSKTST Trigger: TGTGGATGTTTTACTGTGCCACTCTGGGTGTGAACC...ACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CCA 90 bp | GCTCTGGTAGGATGGCAGTGGACAATGGTTGTTGGGCAGTGCTTGCTGAGGGCTGAGAAACTGTTAAACTaGGCCTCCCTCGATGGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALVGWQWTMVVGQCLLRAEKLLN*ASLDGG Trigger: CCCACCATCGAGGGAGGCCCAGTTTAACAGTTTCTC...AGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTACCAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR CAA 72 bp | GTAGGATGGCAGTGGACAATGGTTGTTGGGCAGTGCTaGCTGAGGGCTTGGGCAAGAGATGAACATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: VGWQWTMVVGQC*LRAWARDEHGP Trigger: TGGCCCATGTTCATCTCTTGCCCAAGCCCTCAGCAAGCACTGCCCAACAACCATTGTCCACTGCCATCCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| 3UTR CAA 72 bp | TACATCTCAGCAACACAAAGGACAGGCGCTTGGAGGTaGAGGCCTCTCCTTGCACAGGCTGAGGGTTTCTAC | + |
|
Preference number: 4 (lower is better) Translates to: YISATQRTGAWR*RPLLAQAEGFY Trigger: GTAGAAACCCTCAGCCTGTGCAAGGAGAGGCCTCAACCTCCAAGCGCCTGTCCTTTGTGTTGCTGAGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| 3UTR CAA 72 bp | ATACTGGCACACAGGCCTGTGGGGAGGCCTGGTGACTaGGCTGGTAACATCGGGTCACAAGGAAGAATATTG | + |
|
Preference number: 4 (lower is better) Translates to: ILAHRPVGRPGD*AGNIGSQGRIL Trigger: CAATATTCTTCCTTGTGACCCGATGTTACCAGCCAAGTCACCAGGCCTCCCCACAGGCCTGTGTGCCAGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR TCA 90 bp | GACAGCAGGTTGTCACTGTCACAAGGGATGGGACAAGGAAGTAGCAGGGTCCAGGAGAAGCCAATGGCCTaGATGACAGTCAGCACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: DSRLSLSQGMGQGSSRVQEKPMA*MTVSTN Trigger: GTTTGTGCTGACTGTCATTCAGGCCATTGGCTTCTC...CTGGACCCTGCTACTTCCTTGTCCCATCCCTTGTGACAGTGACAACCTGCTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | CACTGTCACAAGGGATGGGACAAGGAAGTAGCAGGGTCCAGAGGAGCACAGGTAACAGTCAGCACAAACTaGGCTCCAAAGATGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HCHKGWDKEVAGSRGAQVTVSTN*APKMKK Trigger: CTTCTTCATCTTTGGAGCCCAGTTTGTGCTGACTGT...TACCTGTGCTCCTCTGGACCCTGCTACTTCCTTGTCCCATCCCTTGTGACAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CCA 90 bp | CAAGAGATGAACATGGGCCAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACACAGTCAGCACAAACTaGGCTCCAAAGATGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEMNMGQGPPGTLERCSDTVSTN*APKMKK Trigger: CTTCTTCATCTTTGGAGCCCAGTTTGTGCTGACTGT...GTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTGGCCCATGTTCATCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CAA 90 bp | CAAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAAGGCCAGGCCAAAATaGGCACCAGCTCCGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QGPPGTLERCSDLRTEGGKARPK*APAPPA Trigger: TGCGGGCGGAGCTGGTGCCAATTTTGGCCTGGCCTT...ACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CAA 90 bp | CAAGTGGGCAAAGGCCTATTCAGGATCCTGGGTGGTGGAGGGGACAGCAGGTTGTCGGCTCGGAAGGCCTaGTATGCAGGCCGGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: QVGKGLFRILGGGGDSRLSARKA*YAGRNQ Trigger: CTGGTTCCGGCCTGCATACAAGGCCTTCCGAGCCGA...CAACCTGCTGTCCCCTCCACCACCCAGGATCCTGAATAGGCCTTTGCCCACTTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000079883.12 |
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| CDS-3UTR CAA 90 bp | AAGGACCTCCTGGGACCCTTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTATCGGCTCGGAAGGCCTaGTATGCAGGCCGGAACCAG | + |
|
Preference number: 5 (lower is better) Translates to: KDLLGPLRDAQTSGPRVVSARKA*YAGRNQ Trigger: CTGGTTCCGGCCTGCATACAAGGCCTTCCGAGCCGA...TACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAAGGGTCCCAGGAGGTCCTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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| CDS-3UTR CAA 90 bp | TTGAGAGATGCTCAGACCTCAGGACCGAGGGTGGTAACAGGAGACAGAGCCATGAAGGCCAGGCCAAAATaGGCACCAGCTCCGCCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRDAQTSGPRVVTGDRAMKARPK*APAPPA Trigger: TGCGGGCGGAGCTGGTGCCAATTTTGGCCTGGCCTT...CATGGCTCTGTCTCCTGTTACCACCCTCGGTCCTGAGGTCTGAGCATCTCTCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000079883.12 ENSMUST00000180350.3 |
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