Pregenerated sensors for SCAMP3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028049Ensembl transcript IDs: ENSMUST00000029684.15, ENSMUST00000098941.5, ENSMUST00000120697.8
Found 131 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGCGGGCTCTCCACACCTCAAGTCAGGATTAAAGTCATGGCTGTaGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCCC | + |
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Preference number: 1 (lower is better) Translates to: TAGSPHLKSGLKSWL*NEEPHRSHQVVMAP Trigger: GGGAGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTTTAATCCTGACTTGAGGTGTGGAGAGCCCGCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR TCA 90 bp | TGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCCCTaGATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACA | + |
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Preference number: 1 (lower is better) Translates to: WNEEPHRSHQVVMAP*IPETSGIGTILVPT Trigger: TGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTCAGGATTAAAGTCATaGCTGTGGAATGAAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: CGQMGDKRQIMTESQRALSGLKS*LWNEEP Trigger: GGGCTCTTCATTCCACAGCCATGACTTTAATCCTGA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTTAAAGTCATGGCTGTaGAATGAAGAGCCCCATAGA | + |
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Preference number: 2 (lower is better) Translates to: CGQMGDKRQIMTESQRALLKSWL*NEEPHR Trigger: TCTATGGGGCTCTTCATTCCACAGCCATGACTTTAA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR TCA 72 bp | GAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCCCTaGATCCCAGAGACTTCAGGGATAGGGACTATCTTG | + |
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Preference number: 3 (lower is better) Translates to: EPHRSHQVVMAP*IPETSGIGTIL Trigger: CAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGACTTCTATGGGGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR CCA 72 bp | GCGGGCTCTCCACACCTCAAGTCAGGATTAAAGTCATaGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAA | + |
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Preference number: 3 (lower is better) Translates to: AGSPHLKSGLKS*LWNEEPHRSHQ Trigger: TTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTTTAATCCTGACTTGAGGTGTGGAGAGCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| 3UTR CCA 72 bp | TCTCCACACCTCAAGTCAGGATTAAAGTCATGGCTGTaGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTG | + |
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Preference number: 3 (lower is better) Translates to: SPHLKSGLKSWL*NEEPHRSHQVV Trigger: CACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTTTAATCCTGACTTGAGGTGTGGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACGGGCGACGAGCAGCATaGGCACCGCCACGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHGRRAA*APPRQV Trigger: AACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCC...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCAGCTGAAGCCCCACCCTaGGATGCCAATGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRAAEAPP*DANGLE Trigger: CTCCAGGCCATTGGCATCCCAGGGTGGGGCTTCAGC...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCAAGGAGGCTCGTAGGCTaGTGGGGGCTGCTCTCGGTT | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRARRLVG*WGLLSV Trigger: AACCGAGAGCAGCCCCCACCAGCCTACGAGCCTCCT...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCAGTGGCCGCTGCAGCTaGGGCCTGGGTGCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSGRCS*GLGAVG Trigger: TCCTACAGCACCCAGGCCTCAGCTGCAGCGGCCACT...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATGGGCGACGAGCAGCATaGGCACCGCCACGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYGRRAA*APPRQV Trigger: AACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCC...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATAGTGGCCGCTGCAGCTaGGGCCTGGGTGCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYSGRCS*GLGAVG Trigger: TCCTACAGCACCCAGGCCTCAGCTGCAGCGGCCACT...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCGGGCGACGAGCAGCATaGGCACCGCCACGGCAGGTT | + |
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Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALGRRAA*APPRQV Trigger: AACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCC...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATCTTGCTGGGCCTTCTaGAAGCTGGCACCCGTTTGG | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRASCWAF*KLAPVW Trigger: CCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCTCCAGCGTGGCATACTaGTGGCTGGGTCGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSSVAY*WLGRCW Trigger: CCAGCACCGACCCAGCCAGCAGTATGCCACGCTGGA...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCAAGTTGTTCTGTCGAGTaGCTGCACCACCCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRASCSVE*LHHPGR Trigger: TCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACT...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATGGCATACTGCTGGCTaGGTCGGTGCTGGATCACAG | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRAWHTAG*VGAGSQ Trigger: CTGTGATCCAGCACCGACCCAGCCAGCAGTATGCCA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGAGGCTCGTAGGCTaGTGGGGGCTCTCGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHRRLVG*WGLSVL Trigger: GAGAACCGAGAGCCCCCACCAGCCTACGAGCCTCCT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 |
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| CDS-3UTR TCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATGGGCTCTGTGGGGCTaGGCTTTCTTGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRAWALWG*AFLRTV Trigger: TACAGTCCTCAAGAAAGCTCAGCCCCACAGAGCCCA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTAGTGGCCGCTGCAGCTaGGGCCTGGGTGCTGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMASGRCS*GLGAVG Trigger: TCCTACAGCACCCAGGCCTCAGCTGCAGCGGCCACT...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATTCCAGCGTGGCATACTaGTGGCTGGGTCGGTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYSSVAY*WLGRCW Trigger: CCAGCACCGACCCAGCCAGCAGTATGCCACGCTGGA...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGCCCCACCCTGGGATaGCAATGGCCTGGAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHSPTLG*QWPGGQ Trigger: TTGTCCTCCAGGCCATTGGCATCCCAGGGTGGGGCT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCAGCAGCTCCGGCAGCTaGATTGGCAGCAGCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSSSGS*IGSSSS Trigger: CGAACTGCTGCTGCCAATGCAGCTGCCGGAGCTGCT...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATAGGAGGCTCGTAGGCTaGTGGGGGCTCTCGGTTCTC | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYRRLVG*WGLSVL Trigger: GAGAACCGAGAGCCCCCACCAGCCTACGAGCCTCCT...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 |
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| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATGTCCACACAGAACCTaGCCAGGCAGGCGAAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRACPHRT*PGRRRS Trigger: ACTTCTTCGCCTGCCTGGCCAGGTTCTGTGTGGACA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCTCCGGCAGCTGCATTaGCAGCAGCAGTTCGAACCG | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSLRQLH*QQQFEP Trigger: CGGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAG...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCAATCACAGCTGGGTCCTaGAAGGGATTGTCAAGCTCG | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRAITAGS*KGLSSS Trigger: CGAGCTTGACAATCCCTTTCAGGACCCAGCTGTGAT...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTGCTGGCTGGGTCGGTaGTGGATCACAGCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALCWLGR*WITAGS Trigger: GGACCCAGCTGTGATCCAGCACCGACCCAGCCAGCA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTTGCTGGCTGGGTCGGTaGTGGATCACAGCTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMACWLGR*WITAGS Trigger: GGACCCAGCTGTGATCCAGCACCGACCCAGCCAGCA...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCAGTTGTTCTGTCGAGTaGCTGCACCACCCAGGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSCSVE*LHHPGR Trigger: TCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACT...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCAAAGCCTGAGCCACTaGCGGTGTCCACACAGAACC | + |
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Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSQSLSH*RCPHRT Trigger: GGTTCTGTGTGGACACCGGCAGTGGCTCAGGCTTTG...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTAGCCCCACCCTGGGATaGCAATGGCCTGGAGGACAA | + |
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Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLSPTLG*QWPGGQ Trigger: TTGTCCTCCAGGCCATTGGCATCCCAGGGTGGGGCT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATAGCAGCTCCGGCAGCTaGATTGGCAGCAGCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYSSSGS*IGSSSS Trigger: CGAACTGCTGCTGCCAATGCAGCTGCCGGAGCTGCT...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR GCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTAGCAGCTCCGGCAGCTaGATTGGCAGCAGCAGTTCG | + |
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Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLSSSGS*IGSSSS Trigger: CGAACTGCTGCTGCCAATGCAGCTGCCGGAGCTGCT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTAGCGTGGCATACTGCTaGCTGGGTCGGTGCTGGATC | + |
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Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLSVAYC*LGRCWI Trigger: GATCCAGCACCGACCCAGCCAGCAGTATGCCACGCT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCGCTGAAGCCCCACCCTaGGATGCCAATGGCCTGGAG | + |
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Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALAEAPP*DANGLE Trigger: CTCCAGGCCATTGGCATCCCAGGGTGGGGCTTCAGC...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAAGCTGGCACCCGTTTaGCGGTACAGGGAGTGGATC | + |
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Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHKLAPV*RYREWI Trigger: GATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACGGGCCTTCTGAAAGCTaGCACCCGTTTGGCGGTACA | + |
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Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHGPSES*HPFGGT Trigger: TGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCC...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATTCGAACCGCAGGGTTaGAGAAGACACCAGCAGCAA | + |
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Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRAFEPQG*RRHQQQ Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR CCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTCCGGCAGCTGCATTaGCAGCAGCAGTTCGAACCG | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYLRQLH*QQQFEP Trigger: CGGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAG...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATGGGGCTGAGCTTTCTTaGGGACTGTACAGAGGGAGC | + |
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Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYGAELS*GLYRGS Trigger: GCTCCCTCTGTACAGTCCTCAAGAAAGCTCAGCCCC...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS-3UTR TCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCCTCTGCCTTGCGGTTaGGTTCCTCCTGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSPLPCG*VPPASS Trigger: TGAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGG...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTTCTTGCTGGGCCTTCTaGAAGCTGGCACCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLSCWAF*KLAPVW Trigger: CCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCAGCTGAGGCCTGGGTaGTGTAGGAGCCGTAGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAQLRPG*CRSRSS Trigger: GGAACTACGGCTCCTACAGCACCCAGGCCTCAGCTG...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTAGTTGTTCTGTCGAGTaGCTGCACCACCCAGGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLSCSVE*LHHPGR Trigger: TCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCAGCGTGGCATACTGCTaGCTGGGTCGGTGCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALSVAYC*LGRCWI Trigger: GATCCAGCACCGACCCAGCCAGCAGTATGCCACGCT...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATAAGCTGGCACCCGTTTaGCGGTACAGGGAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYKLAPV*RYREWI Trigger: GATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTT...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCCTCCGGCAGCTGCATTaGCAGCAGCAGTTCGAACCG | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALLRQLH*QQQFEP Trigger: CGGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAG...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACATCACAGCTGGGTCCTaGAAGGGATTGTCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHITAGS*KGLSSS Trigger: CGAGCTTGACAATCCCTTTCAGGACCCAGCTGTGAT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTGGGGCTGAGCTTTCTTaGGGACTGTACAGAGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAGAELS*GLYRGS Trigger: GCTCCCTCTGTACAGTCCTCAAGAAAGCTCAGCCCC...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCCTCTGCCTTGCGGTTaGGTTCCTCCTGCTTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYPLPCG*VPPASS Trigger: TGAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGG...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTCTTGCTGGGCCTTCTaGAAGCTGGCACCCGTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALSCWAF*KLAPVW Trigger: CCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCAAAGCCTGAGCCACTaGCGGTGTCCACACAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAQSLSH*RCPHRT Trigger: GGTTCTGTGTGGACACCGGCAGTGGCTCAGGCTTTG...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACGTGCTGGATCACAGCTaGGTCCTGAAAGGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHVLDHS*VLKGIV Trigger: GACAATCCCTTTCAGGACCCAGCTGTGATCCAGCAC...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCGTGCTGGATCACAGCTaGGTCCTGAAAGGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSVLDHS*VLKGIV Trigger: GACAATCCCTTTCAGGACCCAGCTGTGATCCAGCAC...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTGGCATACTGCTGGCTaGGTCGGTGCTGGATCACAG | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALWHTAG*VGAGSQ Trigger: CTGTGATCCAGCACCGACCCAGCCAGCAGTATGCCA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACGGGATGCCAATGGCCTaGAGGACAAAGAACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHGMPMA*RTKNTS Trigger: GGATGTGTTCTTTGTCCTCCAGGCCATTGGCATCCC...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCAAGCTGGCACCCGTTTaGCGGTACAGGGAGTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALKLAPV*RYREWI Trigger: GATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTT...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTGGGCCTTCTGAAAGCTaGCACCCGTTTGGCGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAGPSES*HPFGGT Trigger: TGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCC...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTATCACAGCTGGGTCCTaGAAGGGATTGTCAAGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLITAGS*KGLSSS Trigger: CGAGCTTGACAATCCCTTTCAGGACCCAGCTGTGAT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTTGGGCTCTGTGGGGCTaGGCTTTCTTGAGGACTGTA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAWALWG*AFLRTV Trigger: TACAGTCCTCAAGAAAGCTCAGCCCCACAGAGCCCA...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGTGCTGGATCACAGCTaGGTCCTGAAAGGGATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLVLDHS*VLKGIV Trigger: GACAATCCCTTTCAGGACCCAGCTGTGATCCAGCAC...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCTGTCCACACAGAACCTaGCCAGGCAGGCGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALCPHRT*PGRRRS Trigger: ACTTCTTCGCCTGCCTGGCCAGGTTCTGTGTGGACA...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATGGGATGCCAATGGCCTaGAGGACAAAGAACACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYGMPMA*RTKNTS Trigger: GGATGTGTTCTTTGTCCTCCAGGCCATTGGCATCCC...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATTTCGAACCGCAGGGTTaGAGAAGACACCAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYFEPQG*RRHQQQ Trigger: TTGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAA...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATGTGGACACCGTCTTCTaGAATTCTTGGGGTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYVDTVF*NSWGIS Trigger: GGAGATACCCCAAGAATTTCAGAAGACGGTGTCCAC...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGAAGAGCCAGAGTGCTaGACATCCAGAGGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLEEPEC*TSRGST Trigger: TGTACTACCTCTGGATGTGCAGCACTCTGGCTCTTC...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCTCCAGAGGTAGTACATaGTGGACACCGTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSRGST*WTPSSE Trigger: TTCAGAAGACGGTGTCCACCATGTACTACCTCTGGA...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTACCCTGGGATGCCAATaGCCTGGAGGACAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMATLGCQ*PGGQRT Trigger: TGTTCTTTGTCCTCCAGGCCATTGGCATCCCAGGGT...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCACCCTGGGATGCCAATaGCCTGGAGGACAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALTLGCQ*PGGQRT Trigger: TGTTCTTTGTCCTCCAGGCCATTGGCATCCCAGGGT...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCGTGGACACCGTCTTCTaGAATTCTTGGGGTATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALVDTVF*NSWGIS Trigger: GGAGATACCCCAAGAATTTCAGAAGACGGTGTCCAC...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTGAAGAGCCAGAGTGCTaGACATCCAGAGGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAEEPEC*TSRGST Trigger: TGTACTACCTCTGGATGTGCAGCACTCTGGCTCTTC...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR GCA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCGAAGAGCCAGAGTGCTaGACATCCAGAGGTAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: CGQMGDKRQIMTESQRALEEPEC*TSRGST Trigger: TGTACTACCTCTGGATGTGCAGCACTCTGGCTCTTC...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCATCCATAGAGATGTCTTaGAAAAAGCAAGGCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: ETSGIGTILVPTGDRPRASIEMS*KKQGFT Trigger: TGTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGA...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGAGGTAGTACATGGTaGACACCGTCTTCTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHRGSTW*TPSSEI Trigger: AATTTCAGAAGACGGTGTCCACCATGTACTACCTCT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTTCCAGAGGTAGTACATaGTGGACACCGTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMASRGST*WTPSSE Trigger: TTCAGAAGACGGTGTCCACCATGTACTACCTCTGGA...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR TCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCAACGAAGAAATTGAATaGACTATCACTCCGGAAAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSNEEIE*TITPES Trigger: GCTTTCCGGAGTGATAGTTCATTCAATTTCTTCGTT...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTAGAGGTAGTACATGGTaGACACCGTCTTCTGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLRGSTW*TPSSEI Trigger: AATTTCAGAAGACGGTGTCCACCATGTACTACCTCT...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCTCCATAGAGATGTCTTaGAAAAAGCAAGGCTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSSIEMS*KKQGFT Trigger: TGTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGA...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCACAAAGAACACATCCTaGACGAAGAAAATGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSTKNTS*TKKMKK Trigger: TTTCTTCATTTTCTTCGTCCAGGATGTGTTCTTTGT...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS-3UTR CCA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTACAAAGAACACATCCTaGACGAAGAAAATGAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KSWLWNEEPHRSHQVVMATKNTS*TKKMKK Trigger: TTTCTTCATTTTCTTCGTCCAGGATGTGTTCTTTGT...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS GCA 90 bp | GGCCAGTTGTTCTGTCGAGTGCCTGCACCACCCAGGGCGACATGCTaGAGTTCTCGCTCCCGGCGGTCCAACTCCTCTGCCTTGCGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GQLFCRVPAPPRATC*SSRSRRSNSSALRL Trigger: CAACCGCAAGGCAGAGGAGTTGGACCGCCGGGAGCGAGAACTGCAGCATGTCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS TCA 90 bp | GCTGCAGTTCTCGCTCCCGGCGGTCCAACTCCTCTGCCTTGCGGTTaGGTTCCTCCTGCTTCTTCAGCAGCTCAGCAGTGGCCGCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AAVLAPGGPTPLPCG*VPPASSAAQQWPLQ Trigger: CTGCAGCGGCCACTGCTGAGCTGCTGAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGGAGTTGGACCGCCGGGAGCGAGAACTGCAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS GCA 90 bp | GCGGTACAGGGAGTGGATCCGCTTCAGCATCACGATTCCCAGCACTaGGATGCCGGTGAAGAGCAGGGCGACGAGCAGCATGAGCACCGC | + |
|
Preference number: 5 (lower is better) Translates to: AVQGVDPLQHHDSQH*DAGEEQGDEQHEHR Trigger: GCGGTGCTCATGCTGCTCGTCGCCCTGCTCTTCACCGGCATCGCAGTGCTGGGAATCGTGATGCTGAAGCGGATCCACTCCCTGTACCGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CCA 90 bp | CTGGTGGGGGCTCTCGGTTCTCAAAGGGGTTGTAGACGTCCAGCGTaGCATACTGCTGGCTGGGTCGGTGCTGGATCACAGCTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LVGALGSQRGCRRPA*HTAGWVGAGSQLGP Trigger: AGGACCCAGCTGTGATCCAGCACCGACCCAGCCAGCAGTATGCCACGCTGGACGTCTACAACCCCTTTGAGAACCGAGAGCCCCCACCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 |
||
| CDS CCA 90 bp | GTGGGGGCTGCTCTCGGTTCTCAAAGGGGTTGTAGACGTCCAGCGTaGCATACTGCTGGCTGGGTCGGTGCTGGATCACAGCTGGGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: VGAALGSQRGCRRPA*HTAGWVGAGSQLGP Trigger: AGGACCCAGCTGTGATCCAGCACCGACCCAGCCAGCAGTATGCCACGCTGGACGTCTACAACCCCTTTGAGAACCGAGAGCAGCCCCCAC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000120697.8 |
||
| CDS TCA 90 bp | AGGCCTGGGTGCTGTAGGAGCCGTAGTTCCTGGGCTCTGTGGGGCTaGGCTTTCTTGAGGACTGTACAGAGGGAGCTGAGGGTGGCGGTA | + |
|
Preference number: 5 (lower is better) Translates to: RPGCCRSRSSWALWG*AFLRTVQRELRVAV Trigger: TACCGCCACCCTCAGCTCCCTCTGTACAGTCCTCAAGAAAGCTCAGCCCCACAGAGCCCAGGAACTACGGCTCCTACAGCACCCAGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CCA 90 bp | TCCCACCACCACCAGAGCAGTCACCCAGCCGCTGAAGCCCCACCCTaGGATGCCAATGGCCTGGAGGACAAAGAACACATCCTGGACGAA | + |
|
Preference number: 5 (lower is better) Translates to: SHHHQSSHPAAEAPP*DANGLEDKEHILDE Trigger: TTCGTCCAGGATGTGTTCTTTGTCCTCCAGGCCATTGGCATCCCAGGGTGGGGCTTCAGCGGCTGGGTGACTGCTCTGGTGGTGGTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS TCA 90 bp | GCAGGGTTGGAGAAGACACCAGCAGCAAATTCTTGCTGGGCCTTCTaGAAGCTGGCACCCGTTTGGCGGTACAGGGAGTGGATCCGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: AGLEKTPAANSCWAF*KLAPVWRYREWIRF Trigger: GAAGCGGATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CCA 90 bp | CAGCTCCGGCAGCTGCATTGGCAGCAGCAGTTCGAACCGCAGGGTTaGAGAAGACACCAGCAGCAAATTCTTGCTGGGCCTTCTGAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: QLRQLHWQQQFEPQG*RRHQQQILAGPSES Trigger: GCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAGGTGACAGGCCCAGGGCAAAAGCTGGCACCCGTTaGGCGGTACAGGGAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: ETSGIGTILVPTGDRPRAKAGTR*AVQGVD Trigger: ATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTT...TGCCCTGGGCCTGTCACCTGTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACGCTCCGGCAGCTGCATaGGCAGCAGCAGTTCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHAPAAA*AAAVRT Trigger: GGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAGC...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATGCTCCGGCAGCTGCATaGGCAGCAGCAGTTCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYAPAAA*AAAVRT Trigger: GGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAGC...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGCTCCGGCAGCTGCATaGGCAGCAGCAGTTCGAACC | + |
|
Preference number: 5 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLAPAAA*AAAVRT Trigger: GGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAGC...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CCA 90 bp | TGGAGAAGACACCAGCAGCAAATTCTTGCTGGGCCTTCTGAAAGCTaGCACCCGTTTGGCGGTACAGGGAGTGGATCCGCTTCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: WRRHQQQILAGPSES*HPFGGTGSGSASAS Trigger: TGATGCTGAAGCGGATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACAAAGCTGGCACCCGTTaGGCGGTACAGGGAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHKAGTR*AVQGVD Trigger: ATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCGTTCGAACCGCAGGGTaGGAGAAGACACCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSVRTAG*EKTPAA Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAAC...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACTCCTCTGCCTTGCGGTaGAGTTCCTCCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHSSALR*SSSCFF Trigger: GAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGGA...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATAAAGCTGGCACCCGTTaGGCGGTACAGGGAGTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYKAGTR*AVQGVD Trigger: ATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTT...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATTCCTCTGCCTTGCGGTaGAGTTCCTCCTGCTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYSSALR*SSSCFF Trigger: GAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGGA...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTGTTCGAACCGCAGGGTaGGAGAAGACACCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KSWLWNEEPHRSHQVVMAVRTAG*EKTPAA Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAAC...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCGTTCGAACCGCAGGGTaGGAGAAGACACCAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: CGQMGDKRQIMTESQRALVRTAG*EKTPAA Trigger: TGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAAC...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCACACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: DGSLNPRDFRDRDYLGSHTSSKF*LGLLKA Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...GTGGGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCT | + |
|
Preference number: 5 (lower is better) Translates to: CGQMGDKRQIMTESQRALTSSKF*LGLLKA Trigger: AGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | GGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTGGTTCCCTCCATAGAGATGTCTaGGAAAAAGCAAGGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: GDGSLNPRDFRDRDYLGSLHRDV*EKARLY Trigger: GTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGAG...GGAACCAAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TCACCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCGTCTTCTGAAATTCTaGGGGTATCTCCATAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SPSGDGSLNPRDFRDRDYRLLKF*GYLHRD Trigger: ATCTCTATGGAGATACCCCAAGAATTTCAGAAGACG...ATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | CCAAGTGGTGATGGCTCCCTGAATCCCAGAGACTTCAGGGATAGGGACTATCTTCGTCTTCTGAAATTCTaGGGGTATCTCCATAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: PSGDGSLNPRDFRDRDYLRLLKF*GYLHRD Trigger: ATCTCTATGGAGATACCCCAAGAATTTCAGAAGACG...AAGATAGTCCCTATCCCTGAAGTCTCTGGGATTCAGGGAGCCATCACCACTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | AAGTCATGGCTGTGGAATGAAGAGCCCCATAGAAGTCACCAAGTGGTGATGGCTCTCCATAGAGATGTCTaGGAAAAAGCAAGGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: KSWLWNEEPHRSHQVVMALHRDV*EKARLY Trigger: GTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGAG...AGCCATCACCACTTGGTGACTTCTATGGGGCTCTTCATTCCACAGCCATGACTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCCTCCATAGAGATGTCTaGGAAAAAGCAAGGCTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: CGQMGDKRQIMTESQRALLHRDV*EKARLY Trigger: GTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGAG...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS-3UTR CAA 90 bp | TGTGGCCAGATGGGAGATAAAAGGCAAATAATGACTGAGTCACAGCGGGCTCTCCGTCTTCTGAAATTCTaGGGGTATCTCCATAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: CGQMGDKRQIMTESQRALRLLKF*GYLHRD Trigger: ATCTCTATGGAGATACCCCAAGAATTTCAGAAGACG...GAGAGCCCGCTGTGACTCAGTCATTATTTGCCTTTTATCTCCCATCTGGCCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 72 bp | AGGGCGACGAGCAGCATGAGCACCGCCACGGCAGGTTaGGATCCCACCACCACCAGAGCAGTCACCCAGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RATSSMSTATAG*DPTTTRAVTQP Trigger: CGGCTGGGTGACTGCTCTGGTGGTGGTGGGATCCAAACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 90 bp | GTGAAGAGCAGGGCGACGAGCAGCATGAGCACCGCCACGGCAGGTTaGGATCCCACCACCACCAGAGCAGTCACCCAGCCGCTGAAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: VKSRATSSMSTATAG*DPTTTRAVTQPLKP Trigger: GGGCTTCAGCGGCTGGGTGACTGCTCTGGTGGTGGTGGGATCCAAACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCCTGCTCTTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029684.15 ENSMUST00000120697.8 |
||
| CDS CAA 90 bp | GTGAAGAGCAGGGCGACGAGCAGCATGAGCACCGCCACGGCAGGTTaGGATCCCACCACCACCAGAGCAGTCACCCAGCCGCGGAAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: VKSRATSSMSTATAG*DPTTTRAVTQPRKA Trigger: GGCTTTCCGCGGCTGGGTGACTGCTCTGGTGGTGGTGGGATCCAAACCTGCCGTGGCGGTGCTCATGCTGCTCGTCGCCCTGCTCTTCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000098941.5 |
||
| CDS GCA 72 bp | TTCTGTCGAGTGCCTGCACCACCCAGGGCGACATGCTaGAGTTCTCGCTCCCGGCGGTCCAACTCCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: FCRVPAPPRATC*SSRSRRSNSSA Trigger: GGCAGAGGAGTTGGACCGCCGGGAGCGAGAACTGCAGCATGTCGCCCTGGGTGGTGCAGGCACTCGACAGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 90 bp | TGCTGCAGTTCTCGCTCCCGGCGGTCCAACTCCTCTGCCTTGCGGTaGAGTTCCTCCTGCTTCTTCAGCAGCTCAGCAGTGGCCGCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CCSSRSRRSNSSALR*SSSCFFSSSAVAAA Trigger: TGCAGCGGCCACTGCTGAGCTGCTGAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGGAGTTGGACCGCCGGGAGCGAGAACTGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS TCA 72 bp | CTCGCTCCCGGCGGTCCAACTCCTCTGCCTTGCGGTTaGGTTCCTCCTGCTTCTTCAGCAGCTCAGCAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LAPGGPTPLPCG*VPPASSAAQQW Trigger: CCACTGCTGAGCTGCTGAAGAAGCAGGAGGAACTCAACCGCAAGGCAGAGGAGTTGGACCGCCGGGAGCGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS GCA 72 bp | GGAGTGGATCCGCTTCAGCATCACGATTCCCAGCACTaGGATGCCGGTGAAGAGCAGGGCGACGAGCAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: GVDPLQHHDSQH*DAGEEQGDEQH Trigger: ATGCTGCTCGTCGCCCTGCTCTTCACCGGCATCGCAGTGCTGGGAATCGTGATGCTGAAGCGGATCCACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS TCA 72 bp | GAAAAGGAGCAGCCAGAGCATAGACAGCCCAAAGCCTaGGCCACTGCCGGTGTCCACACAGAACCTGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EKEQPEHRQPKA*ATAGVHTEPGQ Trigger: CTGGCCAGGTTCTGTGTGGACACCGGCAGTGGCTCAGGCTTTGGGCTGTCTATGCTCTGGCTGCTCCTTTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CCA 72 bp | GCTCTCGGTTCTCAAAGGGGTTGTAGACGTCCAGCGTaGCATACTGCTGGCTGGGTCGGTGCTGGATCACAG | + |
|
Preference number: 6 (lower is better) Translates to: ALGSQRGCRRPA*HTAGWVGAGSQ Trigger: CTGTGATCCAGCACCGACCCAGCCAGCAGTATGCCACGCTGGACGTCTACAACCCCTTTGAGAACCGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 72 bp | GGCTTTACAGGGCAAAAAGACGGTAGGGGAGGCCAGTaGTTCTGTCGAGTGCCTGCACCACCCAGGGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: GFTGQKDGRGGQ*FCRVPAPPRAT Trigger: TGTCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACTGGCCTCCCCTACCGTCTTTTTGCCCTGTAAAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 72 bp | GCCCTGAAGGCATTTTCAGCAGCTCCGGCAGCTGCATaGGCAGCAGCAGTTCGAACCGCAGGGTTGGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: ALKAFSAAPAAA*AAAVRTAGLEK Trigger: CTTCTCCAACCCTGCGGTTCGAACTGCTGCTGCCAATGCAGCTGCCGGAGCTGCTGAAAATGCCTTCAGGGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS TCA 72 bp | TGCTGTAGGAGCCGTAGTTCCTGGGCTCTGTGGGGCTaGGCTTTCTTGAGGACTGTACAGAGGGAGCTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CCRSRSSWALWG*AFLRTVQRELR Trigger: CCTCAGCTCCCTCTGTACAGTCCTCAAGAAAGCTCAGCCCCACAGAGCCCAGGAACTACGGCTCCTACAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS GCA 72 bp | AAAAAGACGGTAGGGGAGGCCAGTTGTTCTGTCGAGTaGCTGCACCACCCAGGGCGACATGCTGCAGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: KKTVGEASCSVE*LHHPGRHAAVL Trigger: GAGAACTGCAGCATGTCGCCCTGGGTGGTGCAGGCACTCGACAGAACAACTGGCCTCCCCTACCGTCTTTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 90 bp | ACCAGCAGCAAATTCTTGCTGGGCCTTCTGAAAGCTGGCACCCGTTaGGCGGTACAGGGAGTGGATCCGCTTCAGCATCACGATTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: TSSKFLLGLLKAGTR*AVQGVDPLQHHDSQ Trigger: CTGGGAATCGTGATGCTGAAGCGGATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 90 bp | AGCAGTTCGAACCGCAGGGTTGGAGAAGACACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCTGGCACCCGTTTGGCGGTACAGGGA | + |
|
Preference number: 6 (lower is better) Translates to: SSSNRRVGEDTSSKF*LGLLKAGTRLAVQG Trigger: TCCCTGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGCGGTTCGAACTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
||
| CDS CAA 72 bp | AACCGCAGGGTTGGAGAAGACACCAGCAGCAAATTCTaGCTGGGCCTTCTGAAAGCTGGCACCCGTTTGGCG | + |
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Preference number: 6 (lower is better) Translates to: NRRVGEDTSSKF*LGLLKAGTRLA Trigger: CGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTTGCTGCTGGTGTCTTCTCCAACCCTGCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS CAA 72 bp | AAATTCTTGCTGGGCCTTCTGAAAGCTGGCACCCGTTaGGCGGTACAGGGAGTGGATCCGCTTCAGCATCAC | + |
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Preference number: 6 (lower is better) Translates to: KFLLGLLKAGTR*AVQGVDPLQHH Trigger: GTGATGCTGAAGCGGATCCACTCCCTGTACCGCCAAACGGGTGCCAGCTTTCAGAAGGCCCAGCAAGAATTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS CCA 72 bp | GAAGAGCCAGAGTGCTGCACATCCAGAGGTAGTACATaGTGGACACCGTCTTCTGAAATTCTTGGGGTATCT | + |
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Preference number: 6 (lower is better) Translates to: EEPECCTSRGST*WTPSSEILGVS Trigger: AGATACCCCAAGAATTTCAGAAGACGGTGTCCACCATGTACTACCTCTGGATGTGCAGCACTCTGGCTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS CAA 90 bp | GCACATCCAGAGGTAGTACATGGTGGACACCGTCTTCTGAAATTCTaGGGGTATCTCCATAGAGATGTCTTGGAAAAAGCAAGGCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: AHPEVVHGGHRLLKF*GYLHRDVLEKARLY Trigger: GTAAAGCCTTGCTTTTTCCAAGACATCTCTATGGAGATACCCCAAGAATTTCAGAAGACGGTGTCCACCATGTACTACCTCTGGATGTGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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| CDS CAA 72 bp | GAGGTAGTACATGGTGGACACCGTCTTCTGAAATTCTaGGGGTATCTCCATAGAGATGTCTTGGAAAAAGCA | + |
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Preference number: 6 (lower is better) Translates to: EVVHGGHRLLKF*GYLHRDVLEKA Trigger: TGCTTTTTCCAAGACATCTCTATGGAGATACCCCAAGAATTTCAGAAGACGGTGTCCACCATGTACTACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029684.15 ENSMUST00000098941.5 ENSMUST00000120697.8 |
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