Pregenerated sensors for SCAMP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000040188Ensembl transcript IDs: ENSMUST00000045791.11, ENSMUST00000215942.2, ENSMUST00000216986.2
Found 91 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGAACACCAGGAGCTCACCGGAAGAGGACTTGGGAGACTTCTGTaGTCCCACCCAGAACACAGCTCACCTAGAGTAGAGCCACTGGGG | + |
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Preference number: 1 (lower is better) Translates to: EEHQELTGRGLGRLL*SHPEHSSPRVEPLG Trigger: CCCCAGTGGCTCTACTCTAGGTGAGCTGTGTTCTGGGTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGTGAGCTCCTGGTGTTCTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR TCA 90 bp | AAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAGCTCAGAAGACAGTTaGCAGAGAGGCCAGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: KIGRGQAKAEGQSPLGGESSEDS*QRGQGS Trigger: TGAGCCCTGGCCTCTCTGTCAACTGTCTTCTGAGCT...CTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR GCA 90 bp | TTGCTGAAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGACAAGACAAATCCCTaGCAGGTCTGTGCTGGTGTA | + |
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Preference number: 2 (lower is better) Translates to: LLKIGRGQAKAEGQSPLGDKTNP*QVCAGV Trigger: TACACCAGCACAGACCTGGCAGGGATTTGTCTTGTC...TCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTTCAGCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CAA 90 bp | GCAGACATCTACCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTaGACTTACTTGTCTTCGTCCCCTCCTCATCCCCCAAGTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: ADIYPLTRLVEAGQD*TYLSSSPPHPPSLN Trigger: GTTGAGACTTGGGGGATGAGGAGGGGACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGGTAGATGTCTGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR TCA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCGAGAAAGCTGACTACTaGGGGAGGAGCAGGGACAAG | + |
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Preference number: 2 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVEKADY*GRSRDK Trigger: CTTGTCCCTGCTCCTCCCTCAGTAGTCAGCTTTCTC...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR CCA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGCTGCCAGGTCTGTGCTaGTGTAGTCACTGCATAAGG | + |
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Preference number: 2 (lower is better) Translates to: KLRQRGRVPWEERSQNKQLPGLC*CSHCIR Trigger: CCTTATGCAGTGACTACACCAGCACAGACCTGGCAG...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR GCA 72 bp | AACACAGGGTCCAGGTTTCCACAGCGGCTTCTTAGGTaGCACTGCAGTGACACACCCGTGGAGCCCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: NTGSRFPQRLLR*HCSDTPVEPPG Trigger: TCCTGGGGGCTCCACGGGTGTGTCACTGCAGTGGCACCTAAGAAGCCGCTGTGGAAACCTGGACCCTGTGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGCAGCTCAGAAGACAGTaGACAGAGAGGCCAGGGCTC | + |
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Preference number: 3 (lower is better) Translates to: KLRQRGRVPWEERSQNKQQLRRQ*TERPGL Trigger: GAGCCCTGGCCTCTCTGTCAACTGTCTTCTGAGCTG...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGTACAGTGAGCCCAGGTaGGCCCATGATCCCAAGCAC | + |
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Preference number: 3 (lower is better) Translates to: KLRQRGRVPWEERSQNKQYSEPR*AHDPKH Trigger: GTGCTTGGGATCATGGGCCAACCTGGGCTCACTGTA...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR GCA 72 bp | CAGGAGCTCACCGGAAGAGGACTTGGGAGACTTCTGTaGTCCCACCCAGAACACAGCTCACCTAGAGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: QELTGRGLGRLL*SHPEHSSPRVE Trigger: CTCTACTCTAGGTGAGCTGTGTTCTGGGTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGTGAGCTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR CAA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCTCACCGGAAGAGGACTaGGGAGACTTCTGTGCTCCC | + |
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Preference number: 3 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVSPEED*GDFCAP Trigger: GGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGTGA...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR-3UTR CAA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGGAGGCTGGGCAGGACTaGACTTACTTGTCTTCGTCC | + |
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Preference number: 3 (lower is better) Translates to: KLRQRGRVPWEERSQNKQEAGQD*TYLSSS Trigger: GGACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTC...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR GCA 72 bp | GAGGAGCAGGGACAAGACAAATCCCTGCCAGGTCTGTaGTGGTGTAGTCACTGCATAAGGCACCCGAGGAAA | + |
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Preference number: 3 (lower is better) Translates to: EEQGQDKSLPGL*WCSHCIRHPRK Trigger: TTTCCTCGGGTGCCTTATGCAGTGACTACACCAGCACAGACCTGGCAGGGATTTGTCTTGTCCCTGCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR TCA 72 bp | CTCTCCTTCCCTCTTGTAGAGGAGAAAGCTGACTACTaGGGGAGGAGCAGGGACAAGACAAATCCCTGCCAG | + |
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Preference number: 3 (lower is better) Translates to: LSFPLVEEKADY*GRSRDKTNPCQ Trigger: CTGGCAGGGATTTGTCTTGTCCCTGCTCCTCCCTCAGTAGTCAGCTTTCTCCTCTACAAGAGGGAAGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CCA 72 bp | AGCAGACATCTACCCTCTCACAAGACTGGTAGAGGCTaGGCAGGACTTGACTTACTTGTCTTCGTCCCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SRHLPSHKTGRG*AGLDLLVFVPS Trigger: GGAGGGGACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGGTAGATGTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR TCA 72 bp | ACAGTGAGCCCAGGTTGGCCCATGATCCCAAGCACATaGGTCCATTTGTTTTCAGGGAAAACAGTCCCATTG | + |
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Preference number: 3 (lower is better) Translates to: TVSPGWPMIPST*VHLFSGKTVPL Trigger: CAATGGGACTGTTTTCCCTGAAAACAAATGGACTCATGTGCTTGGGATCATGGGCCAACCTGGGCTCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | AAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGTGGAGAACTGCTGGCTaGGAGGGCCCAGGAGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: KIGRGQAKAEGQSPLGGEWRTAG*EGPGAC Trigger: ACAAGCTCCTGGGCCCTCCCAGCCAGCAGTTCTCCA...CTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | TTGCTGAAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGATTTCACAGGGCACCATaGGGGGAGTGGCGGCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: LLKIGRGQAKAEGQSPLGFHRAP*GEWRPV Trigger: AACTGGCCGCCACTCCCCTCATGGTGCCCTGTGAAA...TCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTTCAGCAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCTCAGCCAGGCCACTCTaGGGAGCATTGGTCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLASARPL*GALVSW Trigger: CCAGCTGACCAATGCTCCTCAGAGTGGCCTGGCTGA...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | AAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAACTCTTCCTGGGCCTaGTGGAAGCTGGCTCCTGTT | + |
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Preference number: 4 (lower is better) Translates to: KIGRGQAKAEGQSPLGGENSSWA*WKLAPV Trigger: AACAGGAGCCAGCTTCCAGCAGGCCCAGGAAGAGTT...CTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGGGGCCTGCTGGAAGCTaGCTCCTGTTCGGCGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: KLRQRGRVPWEERSQNKQGPAGS*LLFGGR Trigger: TCTACCGCCGAACAGGAGCCAGCTTCCAGCAGGCCC...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | CCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCCATGATCCCAAGCACTCTTCCTGGGCCTGCTaGAAGCTGGCTCCTGTTCGG | + |
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Preference number: 4 (lower is better) Translates to: PVENPQYSEPRLAHDPKHSSWAC*KLAPVR Trigger: CCGAACAGGAGCCAGCTTCCAGCAGGCCCAGGAAGA...GTGCTTGGGATCATGGGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCCTGCAGGAGGAAGAGTaGAAGCCCAGCACAGAGGGT | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLALQEEE*KPSTEG Trigger: ACCCTCTGTGCTGGGCTTTCACTCTTCCTCCTGCAG...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | ACCGGAAGAGGACTTGGGAGACTTCTGTGCTCCCACCCAGAACACAGCTCACCTGCAACTCTCGCTCCTTaGGTTCCAGCTCGGCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: TGRGLGRLLCSHPEHSSPATLAP*VPARQL Trigger: AAGCTGCCGAGCTGGAACGCAAGGAGCGAGAGTTGC...AGGTGAGCTGTGTTCTGGGTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCGGGGTTTACGTCCACTaGGTCCGCGAAGGGGTTAGT | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLAGVYVH*VREGVS Trigger: ACTAACCCCTTCGCGGACCCAGTGGACGTAAACCCC...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCGCCCAGGAGCTTGTGTaGCAGGAACTGTTGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLAAQELV*QELLSL Trigger: CAGCGACAACAGTTCCTGCCACACAAGCTCCTGGGC...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | TTGCTGAAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGATCTCTGAGAAGGGATTaGACTCAGCCAGGCCACTCT | + |
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Preference number: 4 (lower is better) Translates to: LLKIGRGQAKAEGQSPLGSLRRD*TQPGHS Trigger: AGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGA...TCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTTCAGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | ACCGGAAGAGGACTTGGGAGACTTCTGTGCTCCCACCCAGAACACAGCTCACCTCACTCTGAGGAGCATTaGTCAGCTGGGTCACAGAGG | + |
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Preference number: 4 (lower is better) Translates to: TGRGLGRLLCSHPEHSSPHSEEH*SAGSQR Trigger: CCTCTGTGACCCAGCTGACCAATGCTCCTCAGAGTG...AGGTGAGCTGTGTTCTGGGTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCCAGCAGGGATCTCCGTaGAGAAGTCCTGATAGAAGC | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLAQQGSP*RSPDRS Trigger: GCTTCTATCAGGACTTCTCCACGGAGATCCCTGCTG...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCTGGGAGAACTCTTCCTaGGCCTGCTGGAAGCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVWENSS*ACWKLA Trigger: AGCCAGCTTCCAGCAGGCCCAGGAAGAGTTCTCCCA...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CAA 72 bp | GTTGTGAAGAACACCAGGAGCTCACCGGAAGAGGACTaGGGAGACTTCTGTGCTCCCACCCAGAACACAGCT | + |
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Preference number: 4 (lower is better) Translates to: VVKNTRSSPEED*GDFCAPTQNTA Trigger: AGCTGTGTTCTGGGTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGTGAGCTCCTGGTGTTCTTCACAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CAA 72 bp | TACCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTaGACTTACTTGTCTTCGTCCCCTCCTCATCCCCCA | + |
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Preference number: 4 (lower is better) Translates to: YPLTRLVEAGQD*TYLSSSPPHPP Trigger: TGGGGGATGAGGAGGGGACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGGTA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCCGCTGCATTTGTCTCTaGGAAGGGATTGAACTCAGC | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLARCICL*EGIELS Trigger: GCTGAGTTCAATCCCTTCTCAGAGACAAATGCAGCG...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCGAAAGGTTCTGCTGCTaGAGATACCCTGGGAGAACT | + |
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Preference number: 4 (lower is better) Translates to: VKYRVPVENPQYSEPRLAERFCC*RYPGRT Trigger: AGTTCTCCCAGGGTATCTTCAGCAGCAGAACCTTTC...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCGGCTGTTCCATTGGCTaGGTCACTTGTGAACCAGGC | + |
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Preference number: 4 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVGCSIG*VTCEPG Trigger: GCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCC...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCCTGCTGAAGATACCCTaGGAGAACTCTTCCTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVLLKIP*ENSSWA Trigger: GGCCCAGGAAGAGTTCTCCCAGGGTATCTTCAGCAG...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CAA 72 bp | ACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTaGTCTTCGTCCCCTCCTCATCCCCCAAGTCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: TRLVEAGQDLTY*SSSPPHPPSLN Trigger: GTTGAGACTTGGGGGATGAGGAGGGGACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | AAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAGCCAATCAACTGGATaGAGTAGATCCCTATTTGAC | + |
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Preference number: 4 (lower is better) Translates to: KIGRGQAKAEGQSPLGGESQSTG*SRSLFD Trigger: GTCAAATAGGGATCTACTTCATCCAGTTGATTGGCT...CTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | GAAGAACACCAGGAGCTCACCGGAAGAGGACTTGGGAGACTTCTGTGCTCCCACCACATGCAAATTCGCTaGAGTGTTCTGCAACTCTCG | + |
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Preference number: 4 (lower is better) Translates to: EEHQELTGRGLGRLLCSHHMQIR*SVLQLS Trigger: CGAGAGTTGCAGAACACTGCAGCGAATTTGCATGTG...GTGGGAGCACAGAAGTCTCCCAAGTCCTCTTCCGGTGAGCTCCTGGTGTTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | AAGATAGGCAGGGGCCAAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGGATAGTAAAGCATCTTaGAAATCCGCTGGTAGTCAG | + |
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Preference number: 4 (lower is better) Translates to: KIGRGQAKAEGQSPLGGEDSKAS*KSAGSQ Trigger: CTGACTACCAGCGGATTTGCAAGATGCTTTACTATC...CTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTTGGCCCCTGCCTATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| 3UTR CAA 72 bp | GTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTaGGCCCATGATCCCAAGCACATGAGTCCATTTGTT | + |
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Preference number: 4 (lower is better) Translates to: VPVENPQYSEPR*AHDPKHMSPFV Trigger: AACAAATGGACTCATGTGCTTGGGATCATGGGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR TCA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGAAGAGTTGTCAGACCTaGAAGCCTTGTAGATGGGTC | + |
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Preference number: 4 (lower is better) Translates to: KLRQRGRVPWEERSQNKQKSCQT*KPCRWV Trigger: GACCCATCTACAAGGCTTTCAGGTCTGACAACTCTT...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CCA 90 bp | GGAAAACAGTCCCATTGCTTCCAGACAAAATCAGACCAAGCCACCATTAGAAAAGGAGCATTGGTCAGCTaGGTCACAGAGGGATCCTGG | + |
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Preference number: 4 (lower is better) Translates to: GKQSHCFQTKSDQATIRKGALVS*VTEGSW Trigger: CCAGGATCCCTCTGTGACCCAGCTGACCAATGCTCC...TTTTCTAATGGTGGCTTGGTCTGATTTTGTCTGGAAGCAATGGGACTGTTTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR GCA 90 bp | GGAAAACAGTCCCATTGCTTCCAGACAAAATCAGACCAAGCCACCATTAGAAAATTCGCTGCAGTGTTCTaGAACTCTCGCTCCTTGCGT | + |
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Preference number: 4 (lower is better) Translates to: GKQSHCFQTKSDQATIRKFAAVF*NSRSLR Trigger: ACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAA...TTTTCTAATGGTGGCTTGGTCTGATTTTGTCTGGAAGCAATGGGACTGTTTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS TCA 90 bp | CTCCTCGGGCAGCAGATGAGGCAGCCCCGCGAAAGGTTCTGCTGCTaGAGATACCCTGGGAGAACTCTTCCTGGGCCTGCTGGAAGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LLGQQMRQPRERFCC*RYPGRTLPGPAGSW Trigger: CCAGCTTCCAGCAGGCCCAGGAAGAGTTCTCCCAGGGTATCTTCAGCAGCAGAACCTTTCGCGGGGCTGCCTCATCTGCTGCCCGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 90 bp | CGCTCCTTGCGTTCCAGCTCGGCAGCTTTCCTGTCTAGTTCTTCCTaGTGTCGAAGCAAGCCTGCCTGGGCCGCAGCTGCAACAGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: RSLRSSSAAFLSSSS*CRSKPAWAAAATAW Trigger: CCAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAGGAAAGCTGCCGAGCTGGAACGCAAGGAGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS CCA 90 bp | GCAGCTTTCCTGTCTAGTTCTTCCTGCTGTCGAAGCAAGCCTGCCTaGGCCGCAGCTGCAACAGCCTGGGGCGTTGGCTGTGCTGGTTCC | + |
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Preference number: 5 (lower is better) Translates to: AAFLSSSSCCRSKPA*AAAATAWGVGCAGS Trigger: GGAACCAGCACAGCCAACGCCCCAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAGGAAAGCTGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 90 bp | CGCTCCTTGCGTTCCAGCTCGGCAGCTTTCCTGTCTAGTTCTTCCTaGTGTCGAAGCAAGCCTGCCTGGGCCGCAGCTGCAACAGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: RSLRSSSAAFLSSSS*CRSKPAWAAAATAF Trigger: GAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAGGAAAGCTGCCGAGCTGGAACGCAAGGAGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS GCA 90 bp | CGCTTGTGGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGCGTCTaGCTCTCTGAGGGCTCACCCGCTGCCAGGAATCGGGCAGGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RLWLSLEILSPPSSV*LSEGSPAARNRAGR Trigger: TCTGCCTGCCCGATTCCTGGCAGCGGGTGAGCCCTCAGAGAGGCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CCA 90 bp | CCTGCCTGGGCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTTGTaGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGCGTCTGCCTC | + |
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Preference number: 5 (lower is better) Translates to: PAWAAAATAFEGLRL*LSLEILSPPSSVCL Trigger: GAGGCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CCA 90 bp | GCAGCTTTCCTGTCTAGTTCTTCCTGCTGTCGAAGCAAGCCTGCCTaGGCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTTGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: AAFLSSSSCCRSKPA*AAAATAFEGLRLWL Trigger: CAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAGGAAAGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS-3UTR CAA 90 bp | CCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCCATGATCCCAAGCACCAACAGCCTGGGGCGTaGGCTGTGCTGGTTCCACTG | + |
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Preference number: 5 (lower is better) Translates to: PVENPQYSEPRLAHDPKHQQPGA*AVLVPL Trigger: CAGTGGAACCAGCACAGCCAACGCCCCAGGCTGTTG...GTGCTTGGGATCATGGGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 90 bp | GAAGCAAGCCTGCCTGGGCCGCAGCTGCAACAGCCTTCGAAGGCTTaGGCTTGTGGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGCG | + |
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Preference number: 5 (lower is better) Translates to: EASLPGPQLQQPSKA*ACGCPWKYYLLLVA Trigger: CGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CCA 90 bp | CCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTTGTGGCTGTCCCTaGAAATACTATCTCCTCCTAGTAGCGTCTGCCTCTCTGAGGGCT | + |
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Preference number: 5 (lower is better) Translates to: PQLQQPSKACACGCP*KYYLLLVASASLRA Trigger: AGCCCTCAGAGAGGCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS TCA 90 bp | GCTGCATTTGTCTCTGAGAAGGGATTGAACTCAGCCAGGCCACTCTaGGGAGCATTGGTCAGCTGGGTCACAGAGGGATCCTGGAAGGGG | + |
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Preference number: 5 (lower is better) Translates to: AAFVSEKGLNSARPL*GALVSWVTEGSWKG Trigger: CCCCTTCCAGGATCCCTCTGTGACCCAGCTGACCAATGCTCCTCAGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGACAAATGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS GCA 90 bp | GGCGGCCAGTTGTTGTCTCGCACATGCAAATTCGCTGCAGTGTTCTaGAACTCTCGCTCCTTGCGTTCCAGCTCGGCAGCTTTCCTGTCT | + |
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Preference number: 5 (lower is better) Translates to: GGQLLSRTCKFAAVF*NSRSLRSSSAAFLS Trigger: AGACAGGAAAGCTGCCGAGCTGGAACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGCATGTGCGAGACAACAACTGGCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS-3UTR CAA 90 bp | GTGAAGTACAGGGTGCCTGTGGAAAATCCCCAGTACAGTGAGCCCAGGTTGGCCGTCTCTGAGAAGGGATaGAACTCAGCCAGGCCACTC | + |
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Preference number: 5 (lower is better) Translates to: VKYRVPVENPQYSEPRLAVSEKG*NSARPL Trigger: GAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGAC...GGCCAACCTGGGCTCACTGTACTGGGGATTTTCCACAGGCACCCTGTACTTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS TCA 90 bp | CCCAGGAGCTTGTGTGGCAGGAACTGTTGTCGCTGCATTTGTCTCTaGGAAGGGATTGAACTCAGCCAGGCCACTCTGAGGAGCATTGGT | + |
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Preference number: 5 (lower is better) Translates to: PRSLCGRNCCRCICL*EGIELSQATLRSIG Trigger: ACCAATGCTCCTCAGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGACAAATGCAGCGACAACAGTTCCTGCCACACAAGCTCCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045791.11 ENSMUST00000215942.2 ENSMUST00000216986.2 |
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| CDS TCA 90 bp | GCTGCATTTGTCTCTGAGAAGGGATTGAACTCAGCCAGGCCACTCTaGGGAGCATTGGTCAGCTGGGTCACAGAGGGATCACTTTGCCCA | + |
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Preference number: 5 (lower is better) Translates to: AAFVSEKGLNSARPL*GALVSWVTEGSLCP Trigger: TGGGCAAAGTGATCCCTCTGTGACCCAGCTGACCAATGCTCCTCAGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGACAAATGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215942.2 |
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| CDS TCA 90 bp | AAAGGATGGAGAGGCCAAAGGCTGTTCCATTGGCTGCGTCACTTGTaGACCAGGCCAGGCACGCAAGCAGGTTTAGAAACAGAGTCACTG | + |
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Preference number: 5 (lower is better) Translates to: KGWRGQRLFHWLRHL*TRPGTQAGLETESL Trigger: CAGTGACTCTGTTTCTAAACCTGCTTGCGTGCCTGGCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCCTTTGGCCTCTCCATCCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CAA 90 bp | CCCTCTCACAAGACTGGTAGAGGCTGGGCAGGACTTGACTTACTTGTCTTCGTCGTGTGGCAGGAACTGTaGTCGCTGCATTTGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSHKTGRGWAGLDLLVFVVWQEL*SLHLSL Trigger: CAGAGACAAATGCAGCGACAACAGTTCCTGCCACAC...GACGAAGACAAGTAAGTCAAGTCCTGCCCAGCCTCTACCAGTCTTGTGAGAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS-3UTR CAA 90 bp | AAGCTAAGGCAGAGGGGCAGAGTCCCTTGGGAGGAGAGAAGCCAAAACAAGCAGAAGAAGCTGAAAGAGTaGTCAGACCTGAAAGCCTTG | + |
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Preference number: 5 (lower is better) Translates to: KLRQRGRVPWEERSQNKQKKLKE*SDLKAL Trigger: CAAGGCTTTCAGGTCTGACAACTCTTTCAGCTTCTT...CTGCTTGTTTTGGCTTCTCTCCTCCCAAGGGACTCTGCCCCTCTGCCTTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS CAA 90 bp | GTCGAAGCAAGCCTGCCTGGGCCGCAGCTGCAACAGCCTGGGGCGTaGGCTGTGCTGGTTCCACTGAGGGCTGGAGAACTGCTGGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: VEASLPGPQLQQPGA*AVLVPLRAGELLAG Trigger: CCCAGCCAGCAGTTCTCCAGCCCTCAGTGGAACCAGCACAGCCAACGCCCCAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS CAA 72 bp | GGCTCACCCGCTGCCAGGAATCGGGCAGGCAGAAACTaGCTGGCCTGTCTAACCGGGAGCTGGGGCGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GSPAARNRAGRN*LACLTGSWGVG Trigger: GCCAACGCCCCAGCTCCCGGTTAGACAGGCCAGCAAGTTTCTGCCTGCCCGATTCCTGGCAGCGGGTGAGCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CAA 90 bp | CTCTCTGAGGGCTCACCCGCTGCCAGGAATCGGGCAGGCAGAAACTaGCTGGCCTGTCTAACCGGGAGCTGGGGCGTTGGCTGTGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: LSEGSPAARNRAGRN*LACLTGSWGVGCAG Trigger: ACCAGCACAGCCAACGCCCCAGCTCCCGGTTAGACAGGCCAGCAAGTTTCTGCCTGCCCGATTCCTGGCAGCGGGTGAGCCCTCAGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS GCA 72 bp | TTCCTGCTGTCGAAGCAAGCCTGCCTGGGCCGCAGCTaGAACAGCCTTCGAAGGCTTGCGCTTGTGGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: FLLSKQACLGRS*NSLRRLALVAV Trigger: GACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CCA 72 bp | TACCCTGGGAGAACTCTTCCTGGGCCTGCTGGAAGCTaGCTCCTGTTCGGCGGTAGAAGGCGTGTACCCGCT | + |
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Preference number: 6 (lower is better) Translates to: YPGRTLPGPAGS*LLFGGRRRVPA Trigger: AGCGGGTACACGCCTTCTACCGCCGAACAGGAGCCAGCTTCCAGCAGGCCCAGGAAGAGTTCTCCCAGGGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 72 bp | CGTTCCAGCTCGGCAGCTTTCCTGTCTAGTTCTTCCTaGTGTCGAAGCAAGCCTGCCTGGGCCGCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RSSSAAFLSSSS*CRSKPAWAAAA Trigger: TGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAGGAAAGCTGCCGAGCTGGAACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CCA 72 bp | GCAGCCCCGCGAAAGGTTCTGCTGCTGAAGATACCCTaGGAGAACTCTTCCTGGGCCTGCTGGAAGCTGGCT | + |
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Preference number: 6 (lower is better) Translates to: AAPRKVLLLKIP*ENSSWACWKLA Trigger: AGCCAGCTTCCAGCAGGCCCAGGAAGAGTTCTCCCAGGGTATCTTCAGCAGCAGAACCTTTCGCGGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS CCA 72 bp | CTGTCTAGTTCTTCCTGCTGTCGAAGCAAGCCTGCCTaGGCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGC | + |
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Preference number: 6 (lower is better) Translates to: LSSSSCCRSKPA*AAAATAFEGLR Trigger: GCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCGACAGCAGGAAGAACTAGACAG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS TCA 72 bp | CAGCAGATGAGGCAGCCCCGCGAAAGGTTCTGCTGCTaGAGATACCCTGGGAGAACTCTTCCTGGGCCTGCT | + |
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Preference number: 6 (lower is better) Translates to: QQMRQPRERFCC*RYPGRTLPGPA Trigger: AGCAGGCCCAGGAAGAGTTCTCCCAGGGTATCTTCAGCAGCAGAACCTTTCGCGGGGCTGCCTCATCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS CAA 72 bp | CCTGCCTGGGCCGCAGCTGCAACAGCCTTCGAAGGCTaGCGCTTGTGGCTGTCCCTGGAAATACTATCTCCT | + |
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Preference number: 6 (lower is better) Translates to: PAWAAAATAFEG*RLWLSLEILSP Trigger: AGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CAA 90 bp | AAGCCTGCCTGGGCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTaGTGGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGCGTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KPAWAAAATAFEGLR*WLSLEILSPPSSVC Trigger: GCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CAA 90 bp | CGAAGCAAGCCTGCCTGGGCCGCAGCTGCAACAGCCTTCGAAGGCTaGCGCTTGTGGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: RSKPAWAAAATAFEG*RLWLSLEILSPPSS Trigger: GCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCAGGCAGGCTTGCTTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS GCA 72 bp | CCAAAGGATGGAGAGGCCAAAGGCTGTTCCATTGGCTaGGTCACTTGTGAACCAGGCCAGGCACGCAAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PKDGEAKGCSIG*VTCEPGQARKQ Trigger: CTGCTTGCGTGCCTGGCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCCTTTGGCCTCTCCATCCTTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 72 bp | CTGTCCCTGGAAATACTATCTCCTCCTAGTAGCGTCTaGCTCTCTGAGGGCTCACCCGCTGCCAGGAATCGG | + |
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Preference number: 6 (lower is better) Translates to: LSLEILSPPSSV*LSEGSPAARNR Trigger: CCGATTCCTGGCAGCGGGTGAGCCCTCAGAGAGGCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS TCA 72 bp | GTCTCTGAGAAGGGATTGAACTCAGCCAGGCCACTCTaGGGAGCATTGGTCAGCTGGGTCACAGAGGGATCC | + |
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Preference number: 6 (lower is better) Translates to: VSEKGLNSARPL*GALVSWVTEGS Trigger: GGATCCCTCTGTGACCCAGCTGACCAATGCTCCTCAGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS GCA 72 bp | CATGAGGGGAGTGGCGGCCAGTTGTTGTCTCGCACATaGAAATTCGCTGCAGTGTTCTGCAACTCTCGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: HEGSGGQLLSRT*KFAAVFCNSRS Trigger: GGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGCATGTGCGAGACAACAACTGGCCGCCACTCCCCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CCA 72 bp | GCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTTGTaGCTGTCCCTGGAAATACTATCTCCTCCTAGTAGC | + |
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Preference number: 6 (lower is better) Translates to: AAAATAFEGLRL*LSLEILSPPSS Trigger: GCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CAA 72 bp | TTCACAGGGCACCATGAGGGGAGTGGCGGCCAGTTGTaGTCTCGCACATGCAAATTCGCTGCAGTGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: FTGHHEGSGGQL*SRTCKFAAVFC Trigger: GCAGAACACTGCAGCGAATTTGCATGTGCGAGACAACAACTGGCCGCCACTCCCCTCATGGTGCCCTGTGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CAA 72 bp | GGTTTCACAGGGCACCATGAGGGGAGTGGCGGCCAGTaGTTGTCTCGCACATGCAAATTCGCTGCAGTGTTC | + |
|
Preference number: 6 (lower is better) Translates to: GFTGHHEGSGGQ*LSRTCKFAAVF Trigger: GAACACTGCAGCGAATTTGCATGTGCGAGACAACAACTGGCCGCCACTCCCCTCATGGTGCCCTGTGAAACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CAA 72 bp | TGGGCCGCAGCTGCAACAGCCTTCGAAGGCTTGCGCTaGTGGCTGTCCCTGGAAATACTATCTCCTCCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: WAAAATAFEGLR*WLSLEILSPPS Trigger: ACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTGCAGCTGCGGCCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS TCA 72 bp | GTCTCTGAGAAGGGATTGAACTCAGCCAGGCCACTCTaGGGAGCATTGGTCAGCTGGGTCACAGAGGGATCA | + |
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Preference number: 6 (lower is better) Translates to: VSEKGLNSARPL*GALVSWVTEGS Trigger: TGATCCCTCTGTGACCCAGCTGACCAATGCTCCTCAGAGTGGCCTGGCTGAGTTCAATCCCTTCTCAGAGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000215942.2 |
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| CDS GCA 72 bp | TGGCGGCCAGTTGTTGTCTCGCACATGCAAATTCGCTaGAGTGTTCTGCAACTCTCGCTCCTTGCGTTCCAG | + |
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Preference number: 6 (lower is better) Translates to: WRPVVVSHMQIR*SVLQLSLLAFQ Trigger: CTGGAACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGCATGTGCGAGACAACAACTGGCCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CAA 72 bp | AGAAACCAAAGGATGGAGAGGCCAAAGGCTGTTCCATaGGCTGCGTCACTTGTGAACCAGGCCAGGCACGCA | + |
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Preference number: 6 (lower is better) Translates to: RNQRMERPKAVP*AASLVNQARHA Trigger: TGCGTGCCTGGCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCCTTTGGCCTCTCCATCCTTTGGTTTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS TCA 72 bp | AGAGGCCAAAGGCTGTTCCATTGGCTGCGTCACTTGTaGACCAGGCCAGGCACGCAAGCAGGTTTAGAAACA | + |
|
Preference number: 6 (lower is better) Translates to: RGQRLFHWLRHL*TRPGTQAGLET Trigger: TGTTTCTAAACCTGCTTGCGTGCCTGGCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCCTTTGGCCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 72 bp | TTGTTGTCTCGCACATGCAAATTCGCTGCAGTGTTCTaGAACTCTCGCTCCTTGCGTTCCAGCTCGGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LLSRTCKFAAVF*NSRSLRSSSAA Trigger: AGCTGCCGAGCTGGAACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGCATGTGCGAGACAACAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CCA 72 bp | CAACAGCCTTCGAAGGCTTGCGCTTGTGGCTGTCCCTaGAAATACTATCTCCTCCTAGTAGCGTCTGCCTCT | + |
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Preference number: 6 (lower is better) Translates to: QQPSKACACGCP*KYYLLLVASAS Trigger: AGAGGCAGACGCTACTAGGAGGAGATAGTATTTCCAGGGACAGCCACAAGCGCAAGCCTTCGAAGGCTGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000216986.2 |
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| CDS CAA 90 bp | GTGAAGATCAGAAACCAAAGGATGGAGAGGCCAAAGGCTGTTCCATaGGCTGCGTCACTTGTGAACCAGGCCAGGCACGCAAGCAGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: VKIRNQRMERPKAVP*AASLVNQARHASRF Trigger: AAACCTGCTTGCGTGCCTGGCCTGGTTCACAAGTGACGCAGCCAATGGAACAGCCTTTGGCCTCTCCATCCTTTGGTTTCTGATCTTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045791.11 |
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| CDS GCA 72 bp | GCAAATTCGCTGCAGTGTTCTGCAACTCTCGCTCCTTaGGTTCCAGCTCGGCAGCTTTCCTGTCTAGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: ANSLQCSATLAP*VPARQLSCLVL Trigger: AAGAACTAGACAGGAAAGCTGCCGAGCTGGAACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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| CDS CAA 72 bp | TGCAAATTCGCTGCAGTGTTCTGCAACTCTCGCTCCTaGCGTTCCAGCTCGGCAGCTTTCCTGTCTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CKFAAVFCNSRS*RSSSAAFLSSS Trigger: AGAACTAGACAGGAAAGCTGCCGAGCTGGAACGCAAGGAGCGAGAGTTGCAGAACACTGCAGCGAATTTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045791.11 ENSMUST00000216986.2 |
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