Pregenerated sensors for SCAI (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035236Ensembl transcript IDs: ENSMUST00000038874.12, ENSMUST00000147433.8, ENSMUST00000204093.3, ENSMUST00000204404.3, ENSMUST00000204500.3
Found 259 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGGACCTTCACCATCAGAACGACCTGTGGGGAAAACGCCAGTGGCTaGCAGGTAAATCAGAAGCACACTATTGGCAGGCAGCTCCTGTAT | + |
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Preference number: 1 (lower is better) Translates to: RTFTIRTTCGENASG*QVNQKHTIGRQLLY Trigger: ATACAGGAGCTGCCTGCCAATAGTGTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
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| 3UTR CCA 90 bp | CATAAGGACCTTCACCATCAGAACGACCTGTGGGGAAAACGCCAGTaGCTGACAGGTAAATCAGAAGCACACTATTGGCAGGCAGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: HKDLHHQNDLWGKRQ*LTGKSEAHYWQAAP Trigger: AGGAGCTGCCTGCCAATAGTGTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTCCTTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR TCA 90 bp | AGGACCTTCACCATCAGAACGACCTGTGGGGAAAACGCCAGTGGCTaGCAGGTAAATCAGAAGCACACTATTGGCAGGCAGCTCCTTAAA | + |
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Preference number: 1 (lower is better) Translates to: RTFTIRTTCGENASG*QVNQKHTIGRQLLK Trigger: TTTAAGGAGCTGCCTGCCAATAGTGTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR GCA 90 bp | TCCACTCACACCGAGTGGACGGATGATTCTGGCAGTGGCCAAGTATaGAGACATTGGCACCTTAATGCATCTCCAGTCCAGAACATTCTC | + |
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Preference number: 1 (lower is better) Translates to: STHTEWTDDSGSGQV*RHWHLNASPVQNIL Trigger: GAGAATGTTCTGGACTGGAGATGCATTAAGGTGCCAATGTCTGCATACTTGGCCACTGCCAGAATCATCCGTCCACTCGGTGTGAGTGGA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR CCA 90 bp | CTGGTGGGCTTGTCAGCTGGCTCCTGTATTCCTGGCTTATTCATCTaGGAAGCTAAATTCATAGGCTCCCTCTCCAAGGCTTGCAACATC | + |
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Preference number: 1 (lower is better) Translates to: LVGLSAGSCIPGLFI*EAKFIGSLSKACNI Trigger: GATGTTGCAAGCCTTGGAGAGGGAGCCTATGAATTTAGCTTCCCAGATGAATAAGCCAGGAATACAGGAGCCAGCTGACAAGCCCACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR CCA 90 bp | AGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTaGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: RILYGFIPWQLWIGF*VISRFPKGLVHPHG Trigger: ACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR CCA 90 bp | CTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTaGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTG | + |
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Preference number: 1 (lower is better) Translates to: LLKVRILYGFIPWQL*IGFWVISRFPKGLV Trigger: CACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR GCA 90 bp | CATGTAGTATCCAGTGTTGAGGAAAGACTAGGAGTTGACTATGTGTaGATAAGCATTCAGGAGAATGTGGGGGAAAGGCGTGGTTGTCCC | + |
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Preference number: 1 (lower is better) Translates to: HVVSSVEERLGVDYV*ISIQENVGERRGCP Trigger: GGGACAACCACGCCTTTCCCCCACATTCTCCTGAATGCTTATGCACACATAGTCAACTCCTAGTCTTTCCTCAACACTGGATACTACATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR GCA 90 bp | GTGAACTTGGTTTTTAATGGTTCTCTGCCTACCCGAAAGGCCTTGTaGATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGC | + |
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Preference number: 1 (lower is better) Translates to: VNLVFNGSLPTRKAL*ILMVAEQKTNLVRS Trigger: GCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAACCATTAAAAACCAAGTTCAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR CCA 90 bp | ACCGAGTGGACGGATGATTCTGGCAGTGGCCAAGTATGCAGACATTaGCACCTTAATGCATCTCCAGTCCAGAACATTCTCTTGTTATTG | + |
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Preference number: 1 (lower is better) Translates to: TEWTDDSGSGQVCRH*HLNASPVQNILLLL Trigger: CAATAACAAGAGAATGTTCTGGACTGGAGATGCATTAAGGTGCCAATGTCTGCATACTTGGCCACTGCCAGAATCATCCGTCCACTCGGT 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR CCA 90 bp | GGCATTCAAATTCATATTCATATTAAGCCTTCCACTCACACCGAGTaGACGGATGATTCTGGCAGTGGCCAAGTATGCAGACATTGGCAC | + |
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Preference number: 1 (lower is better) Translates to: GIQIHIHIKPSTHTE*TDDSGSGQVCRHWH Trigger: GTGCCAATGTCTGCATACTTGGCCACTGCCAGAATCATCCGTCCACTCGGTGTGAGTGGAAGGCTTAATATGAATATGAATTTGAATGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR TCA 90 bp | AGAAGGGCTCTGCTCTTGACTTTCATGTGGCCAGTTTCACCTCTATaGACAATTAGGTATTTCCCAAATCCAGACACTTCCAGGTCCAAG | + |
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Preference number: 1 (lower is better) Translates to: RRALLLTFMWPVSPL*TIRYFPNPDTSRSK Trigger: CTTGGACCTGGAAGTGTCTGGATTTGGGAAATACCTAATTGTTCATAGAGGTGAAACTGGCCACATGAAAGTCAAGAGCAGAGCCCTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR TCA 90 bp | CTATTAGGATTTTTGAGCCAGGGTTTCCTGTGGCCCATGCTAATCTaGAACTTACTATGCACCAGAAGCTGGCCTCAAACTTCTAACTCC | + |
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Preference number: 1 (lower is better) Translates to: LLGFLSQGFLWPMLI*NLLCTRSWPQTSNS Trigger: GGAGTTAGAAGTTTGAGGCCAGCTTCTGGTGCATAGTAAGTTTCAGATTAGCATGGGCCACAGGAAACCCTGGCTCAAAAATCCTAATAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR CCA 90 bp | TCTCAGAAGTTCGTAAATAATAGTGGTAATACAGCTGCCCGATCTTaGAAGCGATTTCCCCTATTTGCCACCGCTTCAAGCCATACCGAT | + |
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Preference number: 1 (lower is better) Translates to: SQKFVNNSGNTAARS*KRFPLFATASSHTD Trigger: ATCGGTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTATTACCACTATTATTTACGAACTTCTGAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR CCA 90 bp | CAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTaGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAA | + |
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Preference number: 1 (lower is better) Translates to: QNVLLKVRILYGFIP*QLWIGFWVISRFPK Trigger: TTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR TCA 90 bp | CAGACACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGCGTaGAGAGGCTACCTCGCTGAGACTGATCTTGCAAAGCTTTTGGAT | + |
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Preference number: 1 (lower is better) Translates to: QTQIGRPLEDCSKRA*RGYLAETDLAKLLD Trigger: ATCCAAAAGCTTTGCAAGATCAGTCTCAGCGAGGTAGCCTCTTCACGCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTGTCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR CCA 90 bp | GATTATCCAAGACTTGTCGATGCTGCTGCTGGAATTTCCAGAGTTTaGTGTAAACATCAAAAGTTCTTCCGAAGTAGGACTGCCACTGCT | + |
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Preference number: 1 (lower is better) Translates to: DYPRLVDAAAGISRV*CKHQKFFRSRTATA Trigger: AGCAGTGGCAGTCCTACTTCGGAAGAACTTTTGATGTTTACACCAAACTCTGGAAATTCCAGCAGCAGCATCGACAAGTCTTGGATAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR TCA 90 bp | AACAACCAACTCAGGCCTGTCCTCTTTATTGACTTGAGAGTAGTATaGTCTCTGTCTGATTGCAGAGTAGAAGGAGAAAGCCTCATTCAG | + |
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Preference number: 1 (lower is better) Translates to: NNQLRPVLFIDLRVV*SLSDCRVEGESLIQ Trigger: CTGAATGAGGCTTTCTCCTTCTACTCTGCAATCAGACAGAGATCATACTACTCTCAAGTCAATAAAGAGGACAGGCCTGAGTTGGTTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR TCA 90 bp | GATCTATTGAACGTGAATGGGTCAGTAGCTGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTTGACACTTTTCCCACAGGCCTCTAC | + |
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Preference number: 1 (lower is better) Translates to: DLLNVNGSVAGQYHG*FFEDILDTFPTGLY Trigger: GTAGAGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATTGCCCAGCTACTGACCCATTCACGTTCAATAGATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR GCA 90 bp | GACACAGGCAGAAGACCCTACAATTCACAGATTTCTGAATTTAAATaGCATGCAACCAAAAGATGCCAGGAAGGAAGAACCTTCACAGCT | + |
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Preference number: 1 (lower is better) Translates to: DTGRRPYNSQISEFK*HATKRCQEGRTFTA Trigger: AGCTGTGAAGGTTCTTCCTTCCTGGCATCTTTTGGTTGCATGGCATTTAAATTCAGAAATCTGTGAATTGTAGGGTCTTCTGCCTGTGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR GCA 90 bp | TTATTCATCTGGGAAGCTAAATTCATAGGCTCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCAACAGTTAATTCGCTGAATTTGACC | + |
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Preference number: 1 (lower is better) Translates to: LFIWEAKFIGSLSKA*NIRNMSTVNSLNLT Trigger: GGTCAAATTCAGCGAATTAACTGTTGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGAGCCTATGAATTTAGCTTCCCAGATGAATAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR GCA 90 bp | TTTTTCGAAGATATTCTTGACACTTTTCCCACAGGCCTCTACGCATaGTTGACAATCCAGACACAAATAGGAAGGCCATTAGAGGATTGT | + |
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Preference number: 1 (lower is better) Translates to: FFEDILDTFPTGLYA*LTIQTQIGRPLEDC Trigger: ACAATCCTCTAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR GCA 90 bp | CACAACGTCCATTTTGTTAAGAAGAAGGCAAACTACTATAAATCTTaGGTAGTATCGGAGTTTCTTAACAACCAACTCAGGCCTGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: HNVHFVKKKANYYKS*VVSEFLNNQLRPVL Trigger: GAGGACAGGCCTGAGTTGGTTGTTAAGAAACTCCGATACTACGCAAGATTTATAGTAGTTTGCCTTCTTCTTAACAAAATGGACGTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR CCA 90 bp | TTGCAAAGCTTTTGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTaGCTGTCCAAACAAATTTGTAAAATTCTTGTAGGCAACACTATT | + |
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Preference number: 1 (lower is better) Translates to: LQSFWICRGRKKADE*LSKQICKILVGNTI Trigger: AATAGTGTTGCCTACAAGAATTTTACAAATTTGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR CCA 90 bp | AAGGAAGAACCTTCACAGCTAGGACCTTTGAGATTACCAAGGAGATaGAGGGAAGGATGTACAAAACGTTTATATTACATATTGAGTCCT | + |
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Preference number: 1 (lower is better) Translates to: KEEPSQLGPLRLPRR*REGCTKRLYYILSP Trigger: AGGACTCAATATGTAATATAAACGTTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGAAGGTTCTTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR GCA 90 bp | TCTCTTGTAATCTCTATAAGCATTTCCTACTCTGTAAGACCTTCCTaGCTCAATTTTAAGAATCCTACAACATACAGGACTCGAGCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SLVISISISYSVRPS*LNFKNPTTYRTRAE Trigger: TTCAGCTCGAGTCCTGTATGTTGTAGGATTCTTAAAATTGAGGCAGGAAGGTCTTACAGAGTAGGAAATGCTTATAGAGATTACAAGAGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR CAA 90 bp | AATAATGAGTGCATCAGCCAGAGACAACTGTCCCACAATCATGCCTaGCTCCAGCAAGGGGGCTCCTGTCTCAGCGAGGCGATTGGATGT | + |
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Preference number: 2 (lower is better) Translates to: NNECISQRQLSHNHA*LQQGGSCLSEAIGC Trigger: ACATCCAATCGCCTCGCTGAGACAGGAGCCCCCTTGCTGGAGCAAGGCATGATTGTGGGACAGTTGTCTCTGGCTGATGCACTCATTATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR GCA 90 bp | GACCTTCACCATCAGAACGACCTGTGGGGAAAACGCCAGTGGCTGACAGGTAAATCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: DLHHQNDLWGKRQWLTGKSLSKA*NIRNMS Trigger: TGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGA...TTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR GCA 90 bp | TGCAAAGCTTTTGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCCACACCATCACAGGGTCTaGCTCAATGAATGCTGCTAC | + |
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Preference number: 2 (lower is better) Translates to: CKAFGYAVGERRQTSGCPHHHRV*LNECCY Trigger: GTAGCAGCATTCATTGAGGCAGACCCTGTGATGGTG...TGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR TCA 90 bp | CAAGGGGGCTCCTGTCTCAGCGAGGCGATTGGATGTGATAACAATAGTGTTATCCAGGGTCTGCCTCAATaGATGCTGCTACCTCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: QGGSCLSEAIGCDNNSVIQGLPQ*MLLPLE Trigger: TTCAAGAGGTAGCAGCATTCATTGAGGCAGACCCTG...GATAACACTATTGTTATCACATCCAATCGCCTCGCTGAGACAGGAGCCCCCTTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR CCA 90 bp | ATTCTTGACACTTTTCCCACAGGCCTCTACGCATGCTTGACAATCCAGACACAAGGTTTTCTCGTCTGGTaGGCTTGTCAGCTGGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: ILDTFPTGLYACLTIQTQGFLVW*ACQLAP Trigger: AGGAGCCAGCTGACAAGCCCACCAGACGAGAAAACC...TTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR CAA 90 bp | GTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTaGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: VLLKVRILYGFIPWQ*WIGFWVISRFPKGL Trigger: AAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR-3UTR CCA 90 bp | TCTATTGAACGTGAATGGGTCAGTAGCTGGGCAATATCACGGTTGATTTTTCGAGGGGGTTTTCTCGTCTaGTGGGCTTGTCAGCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: SIEREWVSSWAISRLIFRGGFLV*WACQLA Trigger: AGCCAGCTGACAAGCCCACCAGACGAGAAAACCCCC...TCGAAAAATCAACCGTGATATTGCCCAGCTACTGACCCATTCACGTTCAATAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR CAA 90 bp | ATAGTGGTAATACAGCTGCCCGATCTTGGAAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATACCGATTATCCAAGACTTGTCGATG | + |
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Preference number: 2 (lower is better) Translates to: IVVIQLPDLGSDFPY*PPLQAIPIIQDLSM Trigger: CATCGACAAGTCTTGGATAATCGGTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTATTACCACTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAACTTCCTAAGTCCCTaGCCCAACCATGACCTGGAC | + |
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Preference number: 2 (lower is better) Translates to: LLCIAKDGLELLMLLLYLNFLSP*PNHDLD Trigger: GTCCAGGTCATGGTTGGGTCAGGGACTTAGGAAGTT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GTTCAAAAAGAGCGTGAAGAGGCTACCTCGCTGAGACTGATCTTGCAAAGCTTTTCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCA | + |
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Preference number: 2 (lower is better) Translates to: VQKEREEATSLRLILQSFSLSKA*NIRNMS Trigger: TGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGA...AAAGCTTTGCAAGATCAGTCTCAGCGAGGTAGCCTCTTCACGCTCTTTTTGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGTTTCCTTGTGAATGGATAGAGATCTCCAGGATGAAGGCAGTGCATTTCTGTCGATGCTGCTGCTaGAATTTCCAGAGTTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: QGFPCEWIEISRMKAVHFCRCCC*NFQSLV Trigger: CACCAAACTCTGGAAATTCCAGCAGCAGCATCGACA...GAAATGCACTGCCTTCATCCTGGAGATCTCTATCCATTCACAAGGAAACCCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR CCA 90 bp | GGTTCTCTGCCTACCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGCCTCATTCAGATAACTaGTCTCAGAAGTTCGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: GSLPTRKALCILMVAEQKPHSDN*SQKFVN Trigger: ATTTACGAACTTCTGAGACCAGTTATCTGAATGAGG...CTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
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| 3UTR-3UTR CCA 90 bp | TGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATTCAGAAGCACACTATTaGCAGGCAGCTCCTGTATTC | + |
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Preference number: 2 (lower is better) Translates to: WIGFWVISRFPKGLVHPHSEAHY*QAAPVF Trigger: GAATACAGGAGCTGCCTGCCAATAGTGTGCTTCTGA...ATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
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| 3UTR CAA 90 bp | TCAACTAGGTTGAAACCCCACCTCAGACATAGACAGAGACTGAACTaGGAGAAGAATGCTTCAGAAGGACCTGTGTCTGATTCGGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: STRLKPHLRHRQRLN*EKNASEGPVSDSEV Trigger: GACTTCCGAATCAGACACAGGTCCTTCTGAAGCATTCTTCTCCAAGTTCAGTCTCTGTCTATGTCTGAGGTGGGGTTTCAACCTAGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR CAA 90 bp | ATCATGCCTTGCTCCAGCAAGGGGGCTCCTGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTGTTATCATCATTTAACACCATCACA | + |
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Preference number: 2 (lower is better) Translates to: IMPCSSKGAPVSARR*DVITIVLSSFNTIT Trigger: TGTGATGGTGTTAAATGATGATAACACTATTGTTATCACATCCAATCGCCTCGCTGAGACAGGAGCCCCCTTGCTGGAGCAAGGCATGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR CAA 90 bp | CCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTaGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAA | + |
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Preference number: 2 (lower is better) Translates to: PKCASEGEDSLRFHP*AVVDRILGNFAFPE Trigger: TTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGAAGGGCTCTGCTCTTaGCTTTCATGTGGCCAGTTT | + |
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Preference number: 2 (lower is better) Translates to: LLCIAKDGLELLMLLLYLEGLCS*LSCGQF Trigger: AAACTGGCCACATGAAAGTCAAGAGCAGAGCCCTTC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR TCA 90 bp | CTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTGCTTCTGTCCATACTaGGGCAAATCTCTTAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: LYGFIPWQLWIGFWVISRCFCPY*GKSLKP Trigger: TGGCTTAAGAGATTTGCCTCAGTATGGACAGAAGCA...ACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
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| 3UTR-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCCAGACCTCTTGCTTTTaGAACAACTGGTCCTTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: LLCIAKDGLELLMLLLYLQTSCF*NNWSLG Trigger: GCCTAAGGACCAGTTGTTTCAAAAGCAAGAGGTCTG...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR TCA 90 bp | TTTTGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCCAAACAAATTTGCTTCTGTCCATACTaGGGCAAATCTCTTAAGCCA | + |
|
Preference number: 2 (lower is better) Translates to: FWICRGRKKADEWLSKQICFCPY*GKSLKP Trigger: TGGCTTAAGAGATTTGCCTCAGTATGGACAGAAGCA...AATTTGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR TCA 90 bp | CACAGGCCTCTACGCATGCTTGACAATCCAGACACAAATAGGAAGGCCATTAGAGACTTGAGAGTAGTATaGTCTCTGTCTGATTGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: HRPLRMLDNPDTNRKAIRDLRVV*SLSDCR Trigger: TCTGCAATCAGACAGAGATCATACTACTCTCAAGTC...TCTAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR GCA 90 bp | ATTCTTGACACTTTTCCCACAGGCCTCTACGCATGCTTGACAATCCAGACACAACAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: ILDTFPTGLYACLTIQTQQSFWI*RGRKKA Trigger: TGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTG...TTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CAA 90 bp | CAACCAAAAGATGCCAGGAAGGAAGAACCTTCACAGCTAGGACCTTaGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACGTTTA | + |
|
Preference number: 2 (lower is better) Translates to: QPKDARKEEPSQLGP*RLPRRWREGCTKRL Trigger: TAAACGTTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGAAGGTTCTTCCTTCCTGGCATCTTTTGGTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 90 bp | TCACTGGCGAGAATATTCATTATACTGGGATTTAACCACAGAGCCTaGCAGATGCTAGGCAAGCACTCTATGACTGAGCCTTATCTTGAC | + |
|
Preference number: 2 (lower is better) Translates to: SLARIFIILGFNHRA*QMLGKHSMTEPYLD Trigger: GTCAAGATAAGGCTCAGTCATAGAGTGCTTGCCTAGCATCTGCAAGGCTCTGTGGTTAAATCCCAGTATAATGAATATTCTCGCCAGTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACCGATTAGTGTGAAGTaGAAAGCAACTCCACAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: SQLGPLRLPRRWREGCTKPISVK*KATPQK Trigger: CTTCTGTGGAGTTGCTTTTCACTTCACACTAATCGG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR GCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCCATGCAACCAAAAGATaGCAGGAAGGAAGAACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: LLCIAKDGLELLMLLLYLHATKR*QEGRTF Trigger: GAAGGTTCTTCCTTCCTGGCATCTTTTGGTTGCATG...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR GCA 90 bp | CCAGACACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGCGTGAAGAGGCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: PDTNRKAIRGLFKKSVKRQSFWI*RGRKKA Trigger: TGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTG...CCTCTTCACGCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTGTCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CCA 90 bp | AATATCACGGTTGATTTTTCGAAGATATTCTTGACACTTTTCCCACAGGCCTCTCTTCCTCTCTCCCTGTaGGATGTCATCTTCAGCACC | + |
|
Preference number: 2 (lower is better) Translates to: NITVDFSKIFLTLFPQASLPLSL*DVIFST Trigger: GGTGCTGAAGATGACATCCCACAGGGAGAGAGGAAG...AGAGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CCA 90 bp | AATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACCTCATTCAGATAACTaGTCTCAGAAGTTCGTAAAT | + |
|
Preference number: 2 (lower is better) Translates to: NFAFPERPCASSWWLNRRPHSDN*SQKFVN Trigger: ATTTACGAACTTCTGAGACCAGTTATCTGAATGAGG...TCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR CAA 90 bp | TTCGAAGATATTCTTGACACTTTTCCCACAGGCCTCTACGCATGCTaGACAATCCAGACACAAATAGGAAGGCCATTAGAGGATTGTTCA | + |
|
Preference number: 2 (lower is better) Translates to: FEDILDTFPTGLYAC*TIQTQIGRPLEDCS Trigger: TGAACAATCCTCTAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR-3UTR GCA 90 bp | CCGGTTACTATTAGTAAGTACACCTCCAAAGTCATAAGGACCTTCACCATCAGAACTTGTCGATGCTGCTaGTGGAATTTCCAGAGTTTG | + |
|
Preference number: 2 (lower is better) Translates to: PVTISKYTSKVIRTFTIRTCRCC*WNFQSL Trigger: CAAACTCTGGAAATTCCAGCAGCAGCATCGACAAGT...TCTGATGGTGAAGGTCCTTATGACTTTGGAGGTGTACTTACTAATAGTAACCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR TCA 90 bp | TCTATTGAACGTGAATGGGTCAGTAGCTGGGCAATATCACGGTTGATTTTTCGAGCCTGTCCTCTTTATTaGCTTGAGAGTAGTATGATC | + |
|
Preference number: 2 (lower is better) Translates to: SIEREWVSSWAISRLIFRACPLY*LESSMI Trigger: GATCATACTACTCTCAAGTCAATAAAGAGGACAGGC...TCGAAAAATCAACCGTGATATTGCCCAGCTACTGACCCATTCACGTTCAATAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAGATTACCAAGGAGATaGAGGGAAGGATGTACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LLCIAKDGLELLMLLLYLRLPRR*REGCTK Trigger: TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR TCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCCCTGACCCAACCATaGCCTGGACTTCACAAAGTA | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATSLTQP*PGLHKV Trigger: TACTTTGTGAAGTCCAGGTCATGGTTGGGTCAGGGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACCCCCTCCTAAGAACTaGGATTATAGATACCCTCCC | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATPPPKN*DYRYPP Trigger: GGGAGGGTATCTATAATCCCAGTTCTTAGGAGGGGG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 90 bp | CTCAATGAATGCTGCTACCTCTTGAAGCACCAGGTTCCACTCGACTaGATCTTCAGTATTAAAGCGATGAGTATAATCTTCAATTTCATC | + |
|
Preference number: 2 (lower is better) Translates to: LNECCYLLKHQVPLD*IFSIKAMSIIFNFI Trigger: GATGAAATTGAAGATTATACTCATCGCTTTAATACTGAAGATCAAGTCGAGTGGAACCTGGTGCTTCAAGAGGTAGCAGCATTCATTGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAACCTTGCAACCTTCCTaGCTTAGCCTCTTATGCACT | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATTLQPS*LSLLCT Trigger: AGTGCATAAGAGGCTAAGGCAGGAAGGTTGCAAGGT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR TCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGTCTCCACGGATAAGTaGGACTTTTCAACTAGGTTG | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATVSTDK*DFSTRL Trigger: CAACCTAGTTGAAAAGTCTCACTTATCCGTGGAGAC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR TCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGGTGATTGTCTTAGGTaGCAGACTAGAATTGTCCAC | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATGDCLR*QTRIVH Trigger: GTGGACAATTCTAGTCTGTCACCTAAGACAATCACC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR TCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACCAGTTTCACCTCTATaGACAATTAGGTATTTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATPVSPL*TIRYFP Trigger: TGGGAAATACCTAATTGTTCATAGAGGTGAAACTGG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR CCA 90 bp | AATATCACGGTTGATTTTTCGAAGATATTCTTGACACTTTTCCCACAGGCCTCTGGAATTTCCAGAGTTTaGTGTAAACATCAAAAGTTC | + |
|
Preference number: 2 (lower is better) Translates to: NITVDFSKIFLTLFPQASGISRV*CKHQKF Trigger: GAACTTTTGATGTTTACACCAAACTCTGGAAATTCC...AGAGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
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| 3UTR-3UTR TCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGGGAATTCTATTACATaGTGGAGGAGAAGAAACAAA | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATGNSIT*WRRRNK Trigger: TTTGTTTCTTCTCCTCCATCATGTAATAGAATTCCC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAAGATTAGAAAAACTGTaGAGCGGATATACCAAGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATRLEKL*SGYTKE Trigger: TTCCTTGGTATATCCGCTGCACAGTTTTTCTAATCT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAATAATATGCACACACTaGATCACTGCATACCAAGAT | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATIICTH*ITAYQD Trigger: ATCTTGGTATGCAGTGATGCAGTGTGTGCATATTAT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAAGTAGAAAGTTGCCCTaGAGTTATTTTACAATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATSRKLP*SYFTMQ Trigger: CTGCATTGTAAAATAACTCCAGGGCAACTTTCTACT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAAGGCAAATCTATTTTTaGAAAAGGGTCTCATACTGT | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATRQIYF*KRVSYC Trigger: ACAGTATGAGACCCTTTTGCAAAAATAGATTTGCCT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATATAGGTATATAATATaGACACACTGCATCACTGCA | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATYRYII*THCITA Trigger: TGCAGTGATGCAGTGTGTGCATATTATATACCTATA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATTAAAGCTGAGAATATaGAGCCTACTCTTAGTATCT | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATLKLRI*SLLLVS Trigger: AGATACTAAGAGTAGGCTGCATATTCTCAGCTTTAA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGAGAGATTTGGTCTTTaGAAGAATACAGTAGAAAGT | + |
|
Preference number: 2 (lower is better) Translates to: DYSLCGKKSISMQLQMATERFGL*KNTVES Trigger: ACTTTCTACTGTATTCTTCCAAAGACCAAATCTCTC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| 3UTR-3UTR CAA 90 bp | GGTTCTCTGCCTACCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGTACAGCTGCCCGATCTaGGAAGCGATTTCCCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: GSLPTRKALCILMVAEQKYSCPI*EAISPI Trigger: AATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTA...CTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR TCA 72 bp | ACCATCAGAACGACCTGTGGGGAAAACGCCAGTGGCTaGCAGGTAAATCAGAAGCACACTATTGGCAGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: TIRTTCGENASG*QVNQKHTIGRQ Trigger: CTGCCTGCCAATAGTGTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR GCA 72 bp | ACCGAGTGGACGGATGATTCTGGCAGTGGCCAAGTATaGAGACATTGGCACCTTAATGCATCTCCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: TEWTDDSGSGQV*RHWHLNASPVQ Trigger: CTGGACTGGAGATGCATTAAGGTGCCAATGTCTGCATACTTGGCCACTGCCAGAATCATCCGTCCACTCGGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | ACCTCGCTGAGACTGATCTTGCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: TSLRLILQSFWI*RGRKKADEWLS Trigger: GGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGATCAGTCTCAGCGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | GAGGCTACCTCGCTGAGACTGATCTTGCAAAGCTTTTaGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EATSLRLILQSF*ICRGRKKADEW Trigger: CCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGATCAGTCTCAGCGAGGTAGCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | GTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCACTCCCTCTCCAAGGCTaGCAACATCCGGAACATGTC | + |
|
Preference number: 3 (lower is better) Translates to: VDRILGNFAFPERPCASSLPLQG*QHPEHV Trigger: GACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGAG...TGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | GTTCTCTGCCTACCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGAGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: VLCLPERPCASSWWLNRRVSARR*DVITIV Trigger: CACTATTGTTATCACATCCAATCGCCTCGCTGAGAC...TCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR TCA 72 bp | GCCTACCCGAAAGGCCTTGTGCATCCTCATGGTGGCTaGACAGAAGACAAACCTTGTGAGAAGCAATCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: AYPKGLVHPHGG*TEDKPCEKQSK Trigger: CTTCGATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR CCA 72 bp | GTGTGTGTGCTAGGAATTAAACCTAGGCGTGGTGGGTaGTCCATGACTCAGAAAGTGGAGGTAGGAGGATCT | + |
|
Preference number: 3 (lower is better) Translates to: VCVLGIKPRRGG*SMTQKVEVGGS Trigger: AGATCCTCCTACCTCCACTTTCTGAGTCATGGACCACCCACCACGCCTAGGTTTAATTCCTAGCACACACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCAAAGCTTTTGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCCAGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: CKAFGYAVGERRQTSGCPVSARR*DVITIV Trigger: CACTATTGTTATCACATCCAATCGCCTCGCTGAGAC...TGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR TCA 72 bp | CGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTaGACAGAAGACAAACCTTGTGAGAAGCAATCGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RFPKGLVHPHGG*TEDKPCEKQSK Trigger: CTTCGATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR GCA 72 bp | TACAGCTGCCCGATCTTGGAAGCGATTTCCCCTATTTaGCACCGCTTCAAGCCATACCGATTATCCAAGACT | + |
|
Preference number: 3 (lower is better) Translates to: YSCPILEAISPI*HRFKPYRLSKT Trigger: AGTCTTGGATAATCGGTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | GCTGAGACTGATCTTGCAAAGCTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGAGTGGCTGTCCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: AETDLAKLLDMP*EKEGRRVAVQT Trigger: TGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGATCAGTCTCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | TTGGCAGGCAGCTCCTGTATTCCTGGCTTATTCATCTaGGAAGCTAAATTCATAGGCTCCCTCTCCAAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: LAGSSCIPGLFI*EAKFIGSLSKA Trigger: AGCCTTGGAGAGGGAGCCTATGAATTTAGCTTCCCAGATGAATAAGCCAGGAATACAGGAGCTGCCTGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | CGCCAGTGGCTGACAGGTAAATCAGAAGCACACTATTaGCAGGCAGCTCCTGTATTCCTGGCTTATTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: RQWLTGKSEAHY*QAAPVFLAYSS Trigger: AGATGAATAAGCCAGGAATACAGGAGCTGCCTGCCAATAGTGTGCTTCTGATTTACCTGTCAGCCACTGGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGAAGGCCTGATCTATTGAACGTGAATGGGTCAGTAGCTGGGCAATATCACGGCCTCTACGCATGCTaGACAATCCAGACACAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GGRPDLLNVNGSVAGQYHGLYAC*TIQTQI Trigger: TATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCC...GTGATATTGCCCAGCTACTGACCCATTCACGTTCAATAGATCAGGCCTTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR TCA 72 bp | TCCATGACTCAGAAAGTGGAGGTAGGAGGATCTCTGTaGGTTCAGCCTGTTCTATATAGGAAGCTCCAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: SMTQKVEVGGSL*VQPVLYRKLQD Trigger: GTCCTGGAGCTTCCTATATAGAACAGGCTGAACTCACAGAGATCCTCCTACCTCCACTTTCTGAGTCATGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CCA 72 bp | ACGGATGATTCTGGCAGTGGCCAAGTATGCAGACATTaGCACCTTAATGCATCTCCAGTCCAGAACATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TDDSGSGQVCRH*HLNASPVQNIL Trigger: GAGAATGTTCTGGACTGGAGATGCATTAAGGTGCCAATGTCTGCATACTTGGCCACTGCCAGAATCATCCGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CCA 72 bp | CAAAGTCATAAGGACCTTCACCATCAGAACGACCTGTaGGGAAAACGCCAGTGGCTGACAGGTAAATCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: QSHKDLHHQNDL*GKRQWLTGKSE Trigger: TTCTGATTTACCTGTCAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTCCTTATGACTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | GGAGTCCACAACGATGAACAGGGGTTTCCTTGTGAATaGATAGAGATCTCCAGGATGAAGGCAGTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: GVHNDEQGFPCE*IEISRMKAVHF Trigger: GAAATGCACTGCCTTCATCCTGGAGATCTCTATCCATTCACAAGGAAACCCCTGTTCATCGTTGTGGACTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CCA 72 bp | TACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTaGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YGFIPWQLWIGF*VISRFPKGLVH Trigger: ATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PKCASEGEDSLRFHPLAVSDFPY*PPLQAI Trigger: TATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCT...AACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTTACAGCTGCCCGATCTaGGAAGCGATTTCCCCTATT | + |
|
Preference number: 3 (lower is better) Translates to: PKCASEGEDSLRFHPLAVYSCPI*EAISPI Trigger: AATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTA...AACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAGAAGGGCTCTGCTCTaGACTTTCATGTGGCCAGTT | + |
|
Preference number: 3 (lower is better) Translates to: LLCIAKDGLELLMLLLYLRRALL*TFMWPV Trigger: AACTGGCCACATGAAAGTCAAGAGCAGAGCCCTTCT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGGATGAAGGCAGTGCATTTCCTTGTGAGACTGATTTCGCTTGTGGATAGCATCAGAAGCACACTATaGGCAGGCAGCTCCTTAAAA | + |
|
Preference number: 3 (lower is better) Translates to: SRMKAVHFLVRLISLVDSIRSTL*AGSSLK Trigger: TTTTAAGGAGCTGCCTGCCAATAGTGTGCTTCTGAT...GCTATCCACAAGCGAAATCAGTCTCACAAGGAAATGCACTGCCTTCATCCTGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR TCA 72 bp | AAGCAAATGAAACTTCCTAAGTCCCTGACCCAACCATaGCCTGGACTTCACAAAGTAAGTGCACTGGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: KQMKLPKSLTQP*PGLHKVSALEQ Trigger: CTGCTCCAGTGCACTTACTTTGTGAAGTCCAGGTCATGGTTGGGTCAGGGACTTAGGAAGTTTCATTTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | TCCAGTGTTGAGGAAAGACTAGGAGTTGACTATGTGTaGATAAGCATTCAGGAGAATGTGGGGGAAAGGCGT | + |
|
Preference number: 3 (lower is better) Translates to: SSVEERLGVDYV*ISIQENVGERR Trigger: ACGCCTTTCCCCCACATTCTCCTGAATGCTTATGCACACATAGTCAACTCCTAGTCTTTCCTCAACACTGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | TGGGAAGCTAAATTCATAGGCTCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCAACAGTTAATTCGCTG | + |
|
Preference number: 3 (lower is better) Translates to: WEAKFIGSLSKA*NIRNMSTVNSL Trigger: CAGCGAATTAACTGTTGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGAGCCTATGAATTTAGCTTCCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR GCA 72 bp | GTTTTTAATGGTTCTCTGCCTACCCGAAAGGCCTTGTaGATCCTCATGGTGGCTGAACAGAAGACAAACCTT | + |
|
Preference number: 3 (lower is better) Translates to: VFNGSLPTRKAL*ILMVAEQKTNL Trigger: AAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAACCATTAAAAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTATTGAACGTGAATGGGTCAGTAGCTGGGCAATATCACGGTTGATTTTTCGAAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATA | + |
|
Preference number: 3 (lower is better) Translates to: SIEREWVSSWAISRLIFRSDFPY*PPLQAI Trigger: TATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCT...TCGAAAAATCAACCGTGATATTGCCCAGCTACTGACCCATTCACGTTCAATAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | TCAGCTGGCTCCTGTATTCCTGGCTTATTCATCTGGGAAGCTAAATTCATAGGCCAGGTTCCACTCGACTaGATCTTCAGTATTAAAGCG | + |
|
Preference number: 3 (lower is better) Translates to: SAGSCIPGLFIWEAKFIGQVPLD*IFSIKA Trigger: CGCTTTAATACTGAAGATCAAGTCGAGTGGAACCTG...GCCTATGAATTTAGCTTCCCAGATGAATAAGCCAGGAATACAGGAGCCAGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR TCA 72 bp | CAGAGAGTAACTTATGTCCTACCGATTAGTGTGAAGTaGAAAGCAACTCCACAGAAGGGCTCTGCTCTTGAC | + |
|
Preference number: 3 (lower is better) Translates to: QRVTYVLPISVK*KATPQKGSALD Trigger: GTCAAGAGCAGAGCCCTTCTGTGGAGTTGCTTTTCACTTCACACTAATCGGTAGGACATAAGTTACTCTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CCA 72 bp | TTCGTAAATAATAGTGGTAATACAGCTGCCCGATCTTaGAAGCGATTTCCCCTATTTGCCACCGCTTCAAGC | + |
|
Preference number: 3 (lower is better) Translates to: FVNNSGNTAARS*KRFPLFATASS Trigger: GCTTGAAGCGGTGGCAAATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTATTACCACTATTATTTACGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR TCA 72 bp | GGAAAGGCGTGGTTGTCCCAGCAATTCATATTTTGCTaGACTGCAAAGTTACCAGCTTTGTTACTGTTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: GKAWLSQQFIFC*TAKLPALLLFG Trigger: CCCAAACAGTAACAAAGCTGGTAACTTTGCAGTTCAGCAAAATATGAATTGCTGGGACAACCACGCCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | GATATTCTTGACACTTTTCCCACAGGCCTCTACGCATaGTTGACAATCCAGACACAAATAGGAAGGCCATTA | + |
|
Preference number: 3 (lower is better) Translates to: DILDTFPTGLYA*LTIQTQIGRPL Trigger: TAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAATATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR CCA 72 bp | ACTTTAGATGTCAGGGAACAGGAAAGTATGCATTGTTaGTCAGTACTTAAGGGAACTGGAACAGAGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: TLDVREQESMHC*SVLKGTGTEAR Trigger: TCTGGCCTCTGTTCCAGTTCCCTTAAGTACTGACCAACAATGCATACTTTCCTGTTCCCTGACATCTAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCCCTGCCCCACACATaGTGCTCAGCTAGAAGCCTA | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATSLPHT*CSARSL Trigger: TAGGCTTCTAGCTGAGCACAATGTGTGGGGCAGGGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | CAGGGGTTTCCTTGTGAATGGATAGAGATCTCCAGGATGAAGGCAGTGCATTTCTTCACAACGTCCATTTaGTTAAGAAGAAGGCAAACT | + |
|
Preference number: 3 (lower is better) Translates to: QGFPCEWIEISRMKAVHFFTTSI*LRRRQT Trigger: AGTTTGCCTTCTTCTTAACAAAATGGACGTTGTGAA...GAAATGCACTGCCTTCATCCTGGAGATCTCTATCCATTCACAAGGAAACCCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR TCA 72 bp | AACGTGAATGGGTCAGTAGCTGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTTGACACTTTTCCCACA | + |
|
Preference number: 3 (lower is better) Translates to: NVNGSVAGQYHG*FFEDILDTFPT Trigger: TGTGGGAAAAGTGTCAAGAATATCTTCGAAAAATCAACCGTGATATTGCCCAGCTACTGACCCATTCACGTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR GCA 72 bp | CAGATTTCTGAATTTAAATGCCATGCAACCAAAAGATaGCAGGAAGGAAGAACCTTCACAGCTAGGACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: QISEFKCHATKR*QEGRTFTARTF Trigger: AAAGGTCCTAGCTGTGAAGGTTCTTCCTTCCTGGCATCTTTTGGTTGCATGGCATTTAAATTCAGAAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGGGGGAAAGGCGTGGTaGTCCCAGCAATTCATATTT | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATGGKAW*SQQFIF Trigger: AAATATGAATTGCTGGGACAACCACGCCTTTCCCCC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCACAGCTAGGACCTTaGAGATTACCAAGGAGATGG | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATSQLGP*RLPRRW Trigger: CCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | AGAAGACCCTACAATTCACAGATTTCTGAATTTAAATaGCATGCAACCAAAAGATGCCAGGAAGGAAGAACC | + |
|
Preference number: 3 (lower is better) Translates to: RRPYNSQISEFK*HATKRCQEGRT Trigger: GGTTCTTCCTTCCTGGCATCTTTTGGTTGCATGGCATTTAAATTCAGAAATCTGTGAATTGTAGGGTCTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR TCA 72 bp | TTTTCCCCTAGTGATGAAGACCAAACACAGGATTTCTaGATACTAGCTAAATGCTCTACCAAGAAGCTACAA | + |
|
Preference number: 3 (lower is better) Translates to: FSPSDEDQTQDF*ILAKCSTKKLQ Trigger: TTGTAGCTTCTTGGTAGAGCATTTAGCTAGTATTCAGAAATCCTGTGTTTGGTCTTCATCACTAGGGGAAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR TCA 72 bp | CCTGTTTATTACAGAAAGAAGTTTAAGCAACTGGGCTaGGATGAGCTCGTGTTTGTTATGTCTATCACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: PVYYRKKFKQLG*DELVFVMSITK Trigger: TTTGGTGATAGACATAACAAACACGAGCTCATCTCAGCCCAGTTGCTTAAACTTCTTTCTGTAATAAACAGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR TCA 72 bp | GTAAAGGCTCTGAATTTGCTGGAAGCATTTTTCAGATaGATGGACTTATCTTTGATATGCAATGCCAGCAAG | + |
|
Preference number: 3 (lower is better) Translates to: VKALNLLEAFFR*MDLSLICNASK Trigger: CTTGCTGGCATTGCATATCAAAGATAAGTCCATTCATCTGAAAAATGCTTCCAGCAAATTCAGAGCCTTTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAACAAGCCCCTTAAAATaGAGGCTTGTGAAGGATATC | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATTSPLK*RLVKDI Trigger: GATATCCTTCACAAGCCTCAATTTTAAGGGGCTTGT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGATGGAAGGCCTAGTTaGAGGAAGATGAATCATCTT | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATDGRPS*RKMNHL Trigger: AAGATGATTCATCTTCCTCAAACTAGGCCTTCCATC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | ACTGGAACAGAGGCCAGACTACTAAGGAATATTTACTaGTACATTCCAGGAGGAAAGTTTATAAAAGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: TGTEARLLRNIY*YIPGGKFIKGK Trigger: TTTTCCTTTTATAAACTTTCCTCCTGGAATGTAGCAGTAAATATTCCTTAGTAGTCTGGCCTCTGTTCCAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | ATCTCTATAAGCATTTCCTACTCTGTAAGACCTTCCTaGCTCAATTTTAAGAATCCTACAACATACAGGACT | + |
|
Preference number: 3 (lower is better) Translates to: ISISISYSVRPS*LNFKNPTTYRT Trigger: AGTCCTGTATGTTGTAGGATTCTTAAAATTGAGGCAGGAAGGTCTTACAGAGTAGGAAATGCTTATAGAGAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CCA 72 bp | CTAGGCAAGCACTCTATGACTGAGCCTTATCTTGACTaGTTTGAATTTCCAAAACAGAACAAAATCCTAATT | + |
|
Preference number: 3 (lower is better) Translates to: LGKHSMTEPYLD*FEFPKQNKILI Trigger: AATTAGGATTTTGTTCTGTTTTGGAAATTCAAACCAGTCAAGATAAGGCTCAGTCATAGAGTGCTTGCCTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CCA 72 bp | TTGCAGAGTAGAAGGAGAAAGCCTCATTCAGATAACTaGTCTCAGAAGTTCGTAAATAATAGTGGTAATACA | + |
|
Preference number: 3 (lower is better) Translates to: LQSRRRKPHSDN*SQKFVNNSGNT Trigger: TGTATTACCACTATTATTTACGAACTTCTGAGACCAGTTATCTGAATGAGGCTTTCTCCTTCTACTCTGCAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGACAACAGTAACTATTaGAATGTGGGGGTAGATGTT | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATDNSNY*NVGVDV Trigger: AACATCTACCCCCACATTCAAATAGTTACTGTTGTC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAAGAAAGAAAATCCTGTaGTGCTTCACTTTGCTTTGT | + |
|
Preference number: 3 (lower is better) Translates to: DYSLCGKKSISMQLQMATRKKIL*CFTLLC Trigger: ACAAAGCAAAGTGAAGCACAACAGGATTTTCTTTCT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR GCA 72 bp | GAGAGATTTGGTCTTTGGAAGAATACAGTAGAAAGTTaGCCTGGAGTTATTTTACAATGCAGAAATAACTTT | + |
|
Preference number: 3 (lower is better) Translates to: ERFGLWKNTVES*PGVILQCRNNF Trigger: AAAGTTATTTCTGCATTGTAAAATAACTCCAGGGCAACTTTCTACTGTATTCTTCCAAAGACCAAATCTCTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GTTCTCTGCCTACCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACTGTGCCAGACAGTCTaGGGGCCAGGCGACTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: VLCLPERPCASSWWLNRRLCQTV*GPGDSA Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGTCTGGCACAG...TCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| 3UTR CAA 72 bp | TGCATCAGCCAGAGACAACTGTCCCACAATCATGCCTaGCTCCAGCAAGGGGGCTCCTGTCTCAGCGAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CISQRQLSHNHA*LQQGGSCLSEA Trigger: CGCCTCGCTGAGACAGGAGCCCCCTTGCTGGAGCAAGGCATGATTGTGGGACAGTTGTCTCTGGCTGATGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR CCA 90 bp | TGCAAAGCTTTTGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCCACTGTGCCAGACAGTCTaGGGGCCAGGCGACTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: CKAFGYAVGERRQTSGCPLCQTV*GPGDSA Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGTCTGGCACAG...TGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR CCA 90 bp | AAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCCTGTGCCAGACAGTCTaGGGGCCAGGCGACTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: KALCILMVAEQKTNLVRSLCQTV*GPGDSA Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGTCTGGCACAG...GCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204093.3 ENSMUST00000204404.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACGTGGTTTCTCCACTGTaGCAGACAGTCTGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNFAFPERPCASSWWLNVVSPL*QTVWGP Trigger: TGGCCCCCAGACTGTCTGGCACAGTGGAGAAACCAC...GTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 |
||
| CDS-3UTR GCA 90 bp | CTCCAAAGTCATAAGGACCTTCACCATCAGAACGACCTGTGGGGAAAACGCCAGGTGGTTTCTCCACTGTaGCAGACAGTCTGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LQSHKDLHHQNDLWGKRQVVSPL*QTVWGP Trigger: TGGCCCCCAGACTGTCTGGCACAGTGGAGAAACCAC...CTGGCGTTTTCCCCACAGGTCGTTCTGATGGTGAAGGTCCTTATGACTTTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR TCA 90 bp | CGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACAATGCTGCTACCTCTTaGAGCACCAGGTTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: RVSRKALCILMVAEQKTNNAATS*STRFHS Trigger: CGAGTGGAACCTGGTGCTTCAAGAGGTAGCAGCATT...GTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | GATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGGGGGGTTTTCTCGTCTaGTGGGCTTGTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DRILGNFAFPERPCASSWGGFLV*WACQLA Trigger: AGCCAGCTGACAAGCCCACCAGACGAGAAAACCCCC...CCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATC 53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR GCA 90 bp | CTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACGCGATTTCCCCTATTTaGCACCGCTTCAAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: LGNFAFPERPCASSWWLNAISPI*HRFKPY Trigger: GTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGC...GTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | CGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGGTTTTCTCGTCTGGTaGGCTTGTCAGCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RFHPLAVVDRILGNFAFPGFLVW*ACQLAP Trigger: AGGAGCCAGCTGACAAGCCCACCAGACGAGAAAACC...GGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | GTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCACATCAGAACGACCTGTaGGGAAAACGCCAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VDRILGNFAFPERPCASSHQNDL*GKRQWL Trigger: CAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATG...TGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | GTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCACTTCCTCTCTCCCTGTaGGATGTCATCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: VDRILGNFAFPERPCASSLPLSL*DVIFST Trigger: GGTGCTGAAGATGACATCCCACAGGGAGAGAGGAAG...TGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| 3UTR CAA 72 bp | AGAGGCTACCTCGCTGAGACTGATCTTGCAAAGCTTTaGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: RGYLAETDLAKL*DMPWEKEGRRV Trigger: CACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGATCAGTCTCAGCGAGGTAGCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR TCA 90 bp | GTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCAGAAAACGCCAGTGGCTaGCAGGTAAATCAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VDRILGNFAFPERPCASSENASG*QVNQKH Trigger: GTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTC...TGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGGGGGTTTTCTCGTCTaGTGGGCTTGTCAGCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLGGFLV*WACQLA Trigger: AGCCAGCTGACAAGCCCACCAGACGAGAAAACCCCC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | ATACAGCTGCCCGATCTTGGAAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATACCGATTATCCAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: IQLPDLGSDFPY*PPLQAIPIIQD Trigger: GTCTTGGATAATCGGTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CAA 72 bp | CATCACAGGGTCTGCCTCAATGAATGCTGCTACCTCTaGAAGCACCAGGTTCCACTCGACTTGATCTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HHRVCLNECCYL*KHQVPLDLIFS Trigger: ACTGAAGATCAAGTCGAGTGGAACCTGGTGCTTCAAGAGGTAGCAGCATTCATTGAGGCAGACCCTGTGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CAA 72 bp | AGTAGATACTTGTGGGGGTTTTCTCGTCTGGTGGGCTaGTCAGCTGGCTCCTGTATTCCTGGCTTATTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SRYLWGFSRLVG*SAGSCIPGLFI Trigger: GATGAATAAGCCAGGAATACAGGAGCCAGCTGACAAGCCCACCAGACGAGAAAACCCCCACAAGTATCTACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| CDS-3UTR GCA 90 bp | AAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCTGCCTCAATGAATGCTaGTACCTCTTGAAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: KALCILMVAEQKTNLVRSCLNEC*YLLKHQ Trigger: CTGGTGCTTCAAGAGGTAGCAGCATTCATTGAGGCA...GCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACTGTGCCAGACAGTCTaGGGGCCAGGCGACTCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATLCQTV*GPGDSA Trigger: CGCGGAGTCGCCTGGCCCCCAGACTGTCTGGCACAG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGGTGGGCTTGTCAGCTaGCTCCTGTATTCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLGGLVS*LLYSWL Trigger: AAGCCAGGAATACAGGAGCCAGCTGACAAGCCCACC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | AGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTGGTGGGCTTGTCAGCTaGCTCCTGTATTCCTGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RILYGFIPWQLWIGFWVIGGLVS*LLYSWL Trigger: AAGCCAGGAATACAGGAGCCAGCTGACAAGCCCACC...AATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGGTTTTCTCGTCTGGTaGGCTTGTCAGCTGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKGFLVW*ACQLAP Trigger: AGGAGCCAGCTGACAAGCCCACCAGACGAGAAAACC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCCATCAGAACGACCTGTaGGGAAAACGCCAGTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLHQNDL*GKRQWL Trigger: CAGCCACTGGCGTTTTCCCCACAGGTCGTTCTGATG...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | AAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTaGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KVRILYGFIPWQ*WIGFWVISRFP Trigger: CGGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| 3UTR CAA 72 bp | GCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTaGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCG | + |
|
Preference number: 4 (lower is better) Translates to: ASEGEDSLRFHP*AVVDRILGNFA Trigger: CGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000204093.3 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| CDS-3UTR TCA 90 bp | GGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGGTTCCACTCGACTTaGTCTTCAGTATTAAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: GNFAFPERPCASSWWLNRRFHST*SSVLKR Trigger: TCGCTTTAATACTGAAGATCAAGTCGAGTGGAACCT...TCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAATGCTGCTACCTCTTaGAGCACCAGGTTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLNAATS*STRFHS Trigger: CGAGTGGAACCTGGTGCTTCAAGAGGTAGCAGCATT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | CCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTCACCATCACAGGGTCTaGCTCAATGAATGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: PKCASEGEDSLRFHPLAVHHHRV*LNECCY Trigger: GTAGCAGCATTCATTGAGGCAGACCCTGTGATGGTG...AACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR GCA 90 bp | CCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTTCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: PKCASEGEDSLRFHPLAVSLSKA*NIRNMS Trigger: TGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGA...AACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATCCCGAAAGGCCTTGTaGATCCTCATGGTGGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKSRKAL*ILMVAE Trigger: TTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACTTCCTCTCTCCCTGTaGGATGTCATCTTCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKLPLSL*DVIFST Trigger: GGTGCTGAAGATGACATCCCACAGGGAGAGAGGAAG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTTGTCGATGCTGCTGCTaGAATTTCCAGAGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWIGFWVISRFPKGLVHPCRCCC*NFQSLV Trigger: CACCAAACTCTGGAAATTCCAGCAGCAGCATCGACA...AGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCCCACAGGCCTCTACGCATGCTTGACAATCCAGACACAAATAGGAAGGCCATTGGGTTTCCTTGTGAATaGATAGAGATCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SHRPLRMLDNPDTNRKAIGFPCE*IEISRM Trigger: CATCCTGGAGATCTCTATCCATTCACAAGGAAACCC...AATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
||
| CDS-3UTR TCA 90 bp | TTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTTGCTTCTGTCCATACTaGGGCAAATCTCTTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LWIGFWVISRFPKGLVHPCFCPY*GKSLKP Trigger: TGGCTTAAGAGATTTGCCTCAGTATGGACAGAAGCA...AGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACAGGGTCTGCCTCAATaGATGCTGCTACCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKQGLPQ*MLLPLE Trigger: TTCAAGAGGTAGCAGCATTCATTGAGGCAGACCCTG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | AGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTCAGGGTCTGCCTCAATaGATGCTGCTACCTCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RILYGFIPWQLWIGFWVIQGLPQ*MLLPLE Trigger: TTCAAGAGGTAGCAGCATTCATTGAGGCAGACCCTG...AATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGAAAACGCCAGTGGCTaGCAGGTAAATCAGAAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLENASG*QVNQKH Trigger: GTGCTTCTGATTTACCTGTCAGCCACTGGCGTTTTC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCTGTTCAAAAAGAGCGTaGAGAGGCTACCTCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLCSKRA*RGYLAE Trigger: CTCAGCGAGGTAGCCTCTTCACGCTCTTTTTGAACA...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | ACAATAGTGTTATCATCATTTAACACCATCACAGGGTCTGCCTCAATGAATGCTGTGGTTTCTCCACTGTaGCAGACAGTCTGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TIVLSSFNTITGSASMNAVVSPL*QTVWGP Trigger: TGGCCCCCAGACTGTCTGGCACAGTGGAGAAACCAC...AGCATTCATTGAGGCAGACCCTGTGATGGTGTTAAATGATGATAACACTATTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGCGATTTCCCCTATTTaGCACCGCTTCAAGCCATAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKAISPI*HRFKPY Trigger: GTATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACACCATCACAGGGTCTaGCTCAATGAATGCTGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKHHHRV*LNECCY Trigger: GTAGCAGCATTCATTGAGGCAGACCCTGTGATGGTG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAATTACCAATAATGAGTaGATCAGCCAGAGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: GNFAFPERPCASSWWLNRITNNE*ISQRQL Trigger: CAGTTGTCTCTGGCTGATGCACTCATTATTGGTAAT...TCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR GCA 90 bp | TCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGACAGGCCTCTACGCATaGTTGCAAAGCTTTTGGATA | + |
|
Preference number: 4 (lower is better) Translates to: SLRFHPLAVVDRILGNFATGLYA*LQSFWI Trigger: TATCCAAAAGCTTTGCAAGCATGCGTAGAGGCCTGT...CGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATTTCCGTTTTCGGGGTaGTTTCTCCACTGTGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKFPFSG*FLHCAR Trigger: TCTGGCACAGTGGAGAAACCACCCCGAAAACGGAAA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCAATCGATGGCTCCTGTATTCCTaGCTTATTCATCTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LCILMVAEQKTNLVRSNRWLLYS*LIHLGS Trigger: GCTTCCCAGATGAATAAGCCAGGAATACAGGAGCCA...TCGATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGGGGTTTCCTTGTGAATaGATAGAGATCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SLRFHPLAVVDRILGNFAGFPCE*IEISRM Trigger: CATCCTGGAGATCTCTATCCATTCACAAGGAAACCC...CGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000204093.3 ENSMUST00000204500.3 |
||
| 3UTR CAA 72 bp | TGCTCCAGCAAGGGGGCTCCTGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTGTTATCATCATTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSSKGAPVSARR*DVITIVLSSFN Trigger: GTTAAATGATGATAACACTATTGTTATCACATCCAATCGCCTCGCTGAGACAGGAGCCCCCTTGCTGGAGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| 3UTR CAA 72 bp | TTGGTTTTTAATGGTTCTCTGCCTACCCGAAAGGCCTaGTGCATCCTCATGGTGGCTGAACAGAAGACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LVFNGSLPTRKA*CILMVAEQKTN Trigger: GTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGTAGGCAGAGAACCATTAAAAACCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147433.8 |
||
| CDS-3UTR TCA 90 bp | TTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTAGTATGATCTCTGTCTaGTTGCAGAGTAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LWIGFWVISRFPKGLVHPSMISV*LQSRRR Trigger: TCTCCTTCTACTCTGCAATCAGACAGAGATCATACT...AGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAATCCTATCCACAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | CTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTTTCGAAGATATTCTTaGCACTTTTCCCACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LKVRILYGFIPWQLWIGFFRRYS*HFSHRP Trigger: AGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAA...GAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCCATCCTCATGGTGGCTaGACAGAAGACAAACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLHPHGG*TEDKPC Trigger: ACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATG...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATGCCTCAATGAATGCTaGTACCTCTTGAAGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKCLNEC*YLLKHQ Trigger: CTGGTGCTTCAAGAGGTAGCAGCATTCATTGAGGCA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCTGTCGATGCTGCTGCTaGAATTTCCAGAGTTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLCRCCC*NFQSLV Trigger: CACCAAACTCTGGAAATTCCAGCAGCAGCATCGACA...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATGGCTCCTGTATTCCTaGCTTATTCATCTGGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKWLLYS*LIHLGS Trigger: GCTTCCCAGATGAATAAGCCAGGAATACAGGAGCCA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GAACATCCAGAATGGAGGCCAATTCCAAAATGTGCTTCTGAAGGTGAGGATTCTCTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: EHPEWRPIPKCASEGEDSLLDMP*EKEGRR Trigger: TCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAG...AGAATCCTCACCTTCAGAAGCACATTTTGGAATTGGCCTCCATTCTGGATGTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATGTGCATCCTCATGGTaGCTGAACAGAAGACAAACC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKCASSW*LNRRQT Trigger: GGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | ATTCTTGACACTTTTCCCACAGGCCTCTACGCATGCTaGACAATCCAGACACAAATAGGAAGGCCATTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: ILDTFPTGLYAC*TIQTQIGRPLE Trigger: CTCTAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGTGGGAAAAGTGTCAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 ENSMUST00000204500.3 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATGCTTCTGTCCATACTaGGGCAAATCTCTTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKCFCPY*GKSLKP Trigger: TGGCTTAAGAGATTTGCCTCAGTATGGACAGAAGCA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGTGGTTTCTCCACTGTaGCAGACAGTCTGGGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATVVSPL*QTVWGP Trigger: TGGCCCCCAGACTGTCTGGCACAGTGGAGAAACCAC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAACTTGTCGATGCTGCTaGTGGAATTTCCAGAGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKTCRCC*WNFQSL Trigger: CAAACTCTGGAAATTCCAGCAGCAGCATCGACAAGT...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKQSFWI*RGRKKA Trigger: TGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GAACATCCAGAATGGAGGCCAATTCCAAAATGTGCTTCTGAAGGTGAGGATTCTCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: EHPEWRPIPKCASEGEDSQSFWI*RGRKKA Trigger: TGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTG...AGAATCCTCACCTTCAGAAGCACATTTTGGAATTGGCCTCCATTCTGGATGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | CGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGACCTCATTCAGATAACTaGTCTCAGAAGTTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RKALCILMVAEQKTNLVRPHSDN*SQKFVN Trigger: ATTTACGAACTTCTGAGACCAGTTATCTGAATGAGG...TCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGGGTTTCCTTGTGAATaGATAGAGATCTCCAGGATG | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKGFPCE*IEISRM Trigger: CATCCTGGAGATCTCTATCCATTCACAAGGAAACCC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTAAGAAGGCAGACGAGTaGCTGTCCAAACAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEGEDSLRFHPLAVVDRIKKADE*LSKQIC Trigger: ACAAATTTGTTTGGACAGCCACTCGTCTGCCTTCTT...AATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204093.3 ENSMUST00000204500.3 |
||
| CDS-3UTR CCA 90 bp | TTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCAATCGAAAGAAGGCAGACGAGTaGCTGTCCAAACAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LCILMVAEQKTNLVRSNRKKADE*LSKQIC Trigger: ACAAATTTGTTTGGACAGCCACTCGTCTGCCTTCTT...TCGATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000204093.3 ENSMUST00000204500.3 |
||
| CDS-3UTR CCA 90 bp | ACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGCGTGAAGAGGCTACCTCTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: TNRKAIRGLFKKSVKRLPLLDMP*EKEGRR Trigger: TCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAG...AGGTAGCCTCTTCACGCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAGTATGATCTCTGTCTaGTTGCAGAGTAGAAGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLSMISV*LQSRRR Trigger: TCTCCTTCTACTCTGCAATCAGACAGAGATCATACT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGACTTGAGAGTAGTATaGTCTCTGTCTGATTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKDLRVV*SLSDCR Trigger: TCTGCAATCAGACAGAGATCATACTACTCTCAAGTC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGCCTGTCCTCTTTATTaGCTTGAGAGTAGTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKACPLY*LESSMI Trigger: GATCATACTACTCTCAAGTCAATAAAGAGGACAGGC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | GATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCCTGTCCTCTTTATTaGCTTGAGAGTAGTATGATC | + |
|
Preference number: 4 (lower is better) Translates to: DSLRFHPLAVVDRILGNFACPLY*LESSMI Trigger: GATCATACTACTCTCAAGTCAATAAAGAGGACAGGC...GAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAAGGTTCCACTCGACTTaGTCTTCAGTATTAAAGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKRFHST*SSVLKR Trigger: TCGCTTTAATACTGAAGATCAAGTCGAGTGGAACCT...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATTTCGAAGATATTCTTaGCACTTTTCCCACAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKFRRYS*HFSHRP Trigger: AGGCCTGTGGGAAAAGTGTCAAGAATATCTTCGAAA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAAGAAGGCAGACGAGTaGCTGTCCAAACAAATTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLKKADE*LSKQIC Trigger: ACAAATTTGTTTGGACAGCCACTCGTCTGCCTTCTT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | TGCTGCTACCTCTTGAAGCACCAGGTTCCACTCGACTaGATCTTCAGTATTAAAGCGATGAGTATAATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CCYLLKHQVPLD*IFSIKAMSIIF Trigger: GAAGATTATACTCATCGCTTTAATACTGAAGATCAAGTCGAGTGGAACCTGGTGCTTCAAGAGGTAGCAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147433.8 ENSMUST00000204404.3 |
||
| CDS-3UTR GCA 90 bp | GCATGCTTGACAATCCAGACACAAATAGGAAGGCCATTAGAGGATTGTTCAAAACAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ACLTIQTQIGRPLEDCSKQSFWI*RGRKKA Trigger: TGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTG...TTTTGAACAATCCTCTAATGGCCTTCCTATTTGTGTCTGGATTGTCAAGCATGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
||
| CDS-3UTR GCA 90 bp | AATCCAGACACAAATAGGAAGGCCATTAGAGGATTGTTCAAAAAGAGCGTGAAGAGAGACATCGGCACTTaGAAAGCTTTTGGATATGCC | + |
|
Preference number: 4 (lower is better) Translates to: NPDTNRKAIRGLFKKSVKRDIGT*KAFGYA Trigger: GGCATATCCAAAAGCTTTGCAAGTGCCGATGTCTCT...CTTCACGCTCTTTTTGAACAATCCTCTAATGGCCTTCCTATTTGTGTCTGGATT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
||
| CDS-3UTR CCA 90 bp | AAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGGAATTTCCAGAGTTTaGTGTAAACATCAAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KVRILYGFIPWQLWIGFWGISRV*CKHQKF Trigger: GAACTTTTGATGTTTACACCAAACTCTGGAAATTCC...CCAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKGQYHG*FFEDIL Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR TCA 90 bp | CATCCAGAATGGAGGCCAATTCCAAAATGTGCTTCTGAAGGTGAGGATTCTCTAGGGCAATATCACGGTTaGTTTTTCGAAGATATTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HPEWRPIPKCASEGEDSLGQYHG*FFEDIL Trigger: AAGAATATCTTCGAAAAATCAACCGTGATATTGCCC...TAGAGAATCCTCACCTTCAGAAGCACATTTTGGAATTGGCCTCCATTCTGGATG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR TCA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCAGAAGACAAACCTTGTaGGAAGCAATCGAAGAAATT | + |
|
Preference number: 4 (lower is better) Translates to: LLCIAKDGLELLMLLLYLRRQTL*EAIEEI Trigger: AATTTCTTCGATTGCTTCTCACAAGGTTTGTCTTCT...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCCCTCTCCAAGGCTTaGAACATCCGGAACATGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATSLSKA*NIRNMS Trigger: TGACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACCTCATTCAGATAACTaGTCTCAGAAGTTCGTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SQLGPLRLPRRWREGCTKPHSDN*SQKFVN Trigger: ATTTACGAACTTCTGAGACCAGTTATCTGAATGAGG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAACAGGCCTCTACGCATaGTTGACAATCCAGACACAA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATTGLYA*LTIQTQ Trigger: TTGTGTCTGGATTGTCAAGCATGCGTAGAGGCCTGT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATLLDMP*EKEGRR Trigger: TCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACCTTGTGCATCCTCATaGTGGCTGAACAGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATPCASS*WLNRRQ Trigger: TTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGAATGGGTCAGTAGCTaGGCAATATCACGGTTGATT | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATEWVSS*AISRLI Trigger: AATCAACCGTGATATTGCCCAGCTACTGACCCATTC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATACGGTTTCATCCCTTaGCAGTTGTGGATAGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATYGFIP*QLWIGF Trigger: GAATCCTATCCACAACTGCCAAGGGATGAAACCGTA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | ATACAGAAAGAAAATCCTGTTGTGCTTCACTTTGCTTaGTGCATAACCAGTCTCTTACAGTCTGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IQKENPVVLHFA*CITSLLQSDSS Trigger: GGAAGAATCAGACTGTAAGAGACTGGTTATGCACAAAGCAAAGTGAAGCACAACAGGATTTTCTTTCTGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| 3UTR CAA 72 bp | TTGTGCTCAGAACTCAGTGAGGATGGAAGGCCTAGTTaGAGGAAGATGAATCATCTTACTTTTATTAACTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCSELSEDGRPS*RKMNHLTFINS Trigger: TGAGTTAATAAAAGTAAGATGATTCATCTTCCTCAAACTAGGCCTTCCATCCTCACTGAGTTCTGAGCACAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCTATTGAACGTGAATaGGTCAGTAGCTGGGCAATA | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATSIERE*VSSWAI Trigger: TATTGCCCAGCTACTGACCCATTCACGTTCAATAGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAATCCCTTGGCAGTTGTaGATAGGATTCTGGGTAATT | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATIPWQL*IGFWVI Trigger: AATTACCCAGAATCCTATCCACAACTGCCAAGGGAT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR GCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAATTACCAATAATGAGTaGATCAGCCAGAGACAACTG | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATITNNE*ISQRQL Trigger: CAGTTGTCTCTGGCTGATGCACTCATTATTGGTAAT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CCA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGGAATTTCCAGAGTTTaGTGTAAACATCAAAAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DYSLCGKKSISMQLQMATGISRV*CKHQKF Trigger: GAACTTTTGATGTTTACACCAAACTCTGGAAATTCC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS-3UTR CAA 90 bp | GGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGATCCCACAATCATGCCTaGCTCCAGCAAGGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GNFAFPERPCASSWWLNRSHNHA*LQQGGS Trigger: GGAGCCCCCTTGCTGGAGCAAGGCATGATTGTGGGA...TCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CAA 90 bp | GGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGAACAGAAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATA | + |
|
Preference number: 5 (lower is better) Translates to: GNFAFPERPCASSWWLNRSDFPY*PPLQAI Trigger: TATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCT...TCTGTTCAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCTCCCACAATCATGCCTaGCTCCAGCAAGGGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLCIAKDGLELLMLLLYLSHNHA*LQQGGS Trigger: GGAGCCCCCTTGCTGGAGCAAGGCATGATTGTGGGA...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
||
| CDS GCA 90 bp | ACTTTTCCCACAGGCCTCTACGCATGCTTGCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCCAAACAAATT | + |
|
Preference number: 5 (lower is better) Translates to: TFPTGLYACLQSFWI*RGRKKADEWLSKQI Trigger: AATTTGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGCATGCGTAGAGGCCTGTGGGAAAAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
||
| CDS-3UTR CAA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACTCCCTCTCCAAGGCTaGCAACATCCGGAACATGTC | + |
|
Preference number: 5 (lower is better) Translates to: SQLGPLRLPRRWREGCTKLPLQG*QHPEHV Trigger: GACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGAG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | CCAATTCCAAAATGTGCTTCTGAAGGTGAGGATTCTCTACGGTTTCATCCCTTGCTCCCTCTCCAAGGCTaGCAACATCCGGAACATGTC | + |
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Preference number: 5 (lower is better) Translates to: PIPKCASEGEDSLRFHPLLPLQG*QHPEHV Trigger: GACATGTTCCGGATGTTGCAAGCCTTGGAGAGGGAG...CAAGGGATGAAACCGTAGAGAATCCTCACCTTCAGAAGCACATTTTGGAATTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | GAACATCCAGAATGGAGGCCAATTCCAAAATGTGCTTCTGAAGGTGAGGATTCTTCTCGTCTGGTGGGCTaGTCAGCTGGCTCCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: EHPEWRPIPKCASEGEDSSRLVG*SAGSCI Trigger: AATACAGGAGCCAGCTGACAAGCCCACCAGACGAGA...AGAATCCTCACCTTCAGAAGCACATTTTGGAATTGGCCTCCATTCTGGATGTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | ATTCTGGGTAATTTCGCGTTTCCCGAAAGGCCTTGTGCATCCTCATGGTGGCTGATCAGAAGCACACTATaGGCAGGCAGCTCCTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: ILGNFAFPERPCASSWWLIRSTL*AGSSLK Trigger: TTTTAAGGAGCTGCCTGCCAATAGTGTGCTTCTGAT...CAGCCACCATGAGGATGCACAAGGCCTTTCGGGAAACGCGAAATTACCCAGAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGTTTCCCGAAAGGCCTaGTGCATCCTCATGGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LLCIAKDGLELLMLLLYLVSRKA*CILMVA Trigger: AGCCACCATGAGGATGCACAAGGCCTTTCGGGAAAC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCAATCGAAGATACAGCTGCCCGATCTaGGAAGCGATTTCCCCTATT | + |
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Preference number: 5 (lower is better) Translates to: CILMVAEQKTNLVRSNRRYSCPI*EAISPI Trigger: AATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTA...TCTTCGATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | CGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCCAGGTTCCACTCGACTaGATCTTCAGTATTAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: RFHPLAVVDRILGNFAFPQVPLD*IFSIKA Trigger: CGCTTTAATACTGAAGATCAAGTCGAGTGGAACCTG...GGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | GCCTTGTGCATCCTCATGGTGGCTGAACAGAAGACAAACCTTGTGAGAAGCAATGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTG | + |
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Preference number: 5 (lower is better) Translates to: ALCILMVAEQKTNLVRSNVSARR*DVITIV Trigger: CACTATTGTTATCACATCCAATCGCCTCGCTGAGAC...ATTGCTTCTCACAAGGTTTGTCTTCTGTTCAGCCACCATGAGGATGCACAAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAATACAGCTGCCCGATCTaGGAAGCGATTTCCCCTATT | + |
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Preference number: 5 (lower is better) Translates to: SQLGPLRLPRRWREGCTKYSCPI*EAISPI Trigger: AATAGGGGAAATCGCTTCCAAGATCGGGCAGCTGTA...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | CGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGGGTAATTTCGCGTTTCCCTGGATAGCATCTCCATaGATAATGTCCCGGTTACTA | + |
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Preference number: 5 (lower is better) Translates to: RFHPLAVVDRILGNFAFPWIASP*IMSRLL Trigger: TAGTAACCGGGACATTATCAATGGAGATGCTATCCA...GGGAAACGCGAAATTACCCAGAATCCTATCCACAACTGCCAAGGGATGAAACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAGTCTCAGCGAGGCGATaGGATGTGATAACAATAGTG | + |
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Preference number: 5 (lower is better) Translates to: SQLGPLRLPRRWREGCTKVSARR*DVITIV Trigger: CACTATTGTTATCACATCCAATCGCCTCGCTGAGAC...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCGGAAGGCCTGATCTATaGAACGTGAATGGGTCAGTA | + |
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Preference number: 5 (lower is better) Translates to: LLCIAKDGLELLMLLLYLGRPDL*NVNGSV Trigger: TACTGACCCATTCACGTTCAATAGATCAGGCCTTCC...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAACTACGGTTTCATCCCTaGGCAGTTGTGGATAGGATT | + |
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Preference number: 5 (lower is better) Translates to: SQLGPLRLPRRWREGCTKLRFHP*AVVDRI Trigger: AATCCTATCCACAACTGCCAAGGGATGAAACCGTAG...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATCTCGTCTGGTGGGCTaGTCAGCTGGCTCCTGTATT | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATSRLVG*SAGSCI Trigger: AATACAGGAGCCAGCTGACAAGCCCACCAGACGAGA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TCACAGCTAGGACCTTTGAGATTACCAAGGAGATGGAGGGAAGGATGTACAAAAAAGGCCATTAGAGGATaGTTCAAAAAGAGCGTGAAG | + |
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Preference number: 5 (lower is better) Translates to: SQLGPLRLPRRWREGCTKKAIRG*FKKSVK Trigger: CTTCACGCTCTTTTTGAACAATCCTCTAATGGCCTT...TTTTGTACATCCTTCCCTCCATCTCCTTGGTAATCTCAAAGGTCCTAGCTGTGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GAAGGTGAGGATTCTCTACGGTTTCATCCCTTGGCAGTTGTGGATAGGATTCTGTGGGCAATATCACGGTaGATTTTTCGAAGATATTCT | + |
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Preference number: 5 (lower is better) Translates to: EGEDSLRFHPLAVVDRILWAISR*IFRRYS Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...CAGAATCCTATCCACAACTGCCAAGGGATGAAACCGTAGAGAATCCTCACCTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAAGCGATTTCCCCTATTaGCCACCGCTTCAAGCCATA | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATSDFPY*PPLQAI Trigger: TATGGCTTGAAGCGGTGGCAAATAGGGGAAATCGCT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCTTCACAACGTCCATTTaGTTAAGAAGAAGGCAAACT | + |
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Preference number: 5 (lower is better) Translates to: LLCIAKDGLELLMLLLYLFTTSI*LRRRQT Trigger: AGTTTGCCTTCTTCTTAACAAAATGGACGTTGTGAA...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | TTACTCTGTATAGCTAAGGATGGCCTTGAACTCCTGATGCTCTTGCTATACCTCTGGGCAATATCACGGTaGATTTTTCGAAGATATTCT | + |
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Preference number: 5 (lower is better) Translates to: LLCIAKDGLELLMLLLYLWAISR*IFRRYS Trigger: AGAATATCTTCGAAAAATCAACCGTGATATTGCCCA...GAGGTATAGCAAGAGCATCAGGAGTTCAAGGCCATCCTTAGCTATACAGAGTAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAGGCCTCTACGCATGCTaGACAATCCAGACACAAATA | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATGLYAC*TIQTQI Trigger: TATTTGTGTCTGGATTGTCAAGCATGCGTAGAGGCC...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATTCATCCCTTGGCAGTaGTGGATAGGATTCTGGGTA | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATFIPWQ*WIGFWV Trigger: TACCCAGAATCCTATCCACAACTGCCAAGGGATGAA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACACAGGTTCCACTCGACTaGATCTTCAGTATTAAAGCG | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATQVPLD*IFSIKA Trigger: CGCTTTAATACTGAAGATCAAGTCGAGTGGAACCTG...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACAATCAGAAGCACACTATaGGCAGGCAGCTCCTTAAAA | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATIRSTL*AGSSLK Trigger: TTTTAAGGAGCTGCCTGCCAATAGTGTGCTTCTGAT...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS-3UTR CAA 90 bp | GATTATAGTCTATGCGGTAAAAAGAGTATTTCTATGCAACTACAAATGGCCACATGGATAGCATCTCCATaGATAATGTCCCGGTTACTA | + |
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Preference number: 5 (lower is better) Translates to: DYSLCGKKSISMQLQMATWIASP*IMSRLL Trigger: TAGTAACCGGGACATTATCAATGGAGATGCTATCCA...TGTGGCCATTTGTAGTTGCATAGAAATACTCTTTTTACCGCATAGACTATAATC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000038874.12 |
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| CDS GCA 72 bp | ACAGGCCTCTACGCATGCTTGCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TGLYACLQSFWI*RGRKKADEWLS Trigger: GGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGCATGCGTAGAGGCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS GCA 72 bp | ACAGAGAGACATCGGCACTTGCAAAGCTTTTGGATATaGCGTGGGAGAAAGAAGGCAGACGAGTGGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: TERHRHLQSFWI*RGRKKADEWLS Trigger: GGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGTGCCGATGTCTCTCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
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| CDS CCA 72 bp | TCTCCCACAGAGAGACATCGGCACTTGCAAAGCTTTTaGATATGCCGTGGGAGAAAGAAGGCAGACGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: SPTERHRHLQSF*ICRGRKKADEW Trigger: CCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGTGCCGATGTCTCTCTGTGGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
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| CDS CCA 72 bp | GAGACATCGGCACTTGCAAAGCTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGAGTGGCTGTCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: ETSALAKLLDMP*EKEGRRVAVQT Trigger: TGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGTGCCGATGTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
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| CDS CCA 72 bp | CCTCTACGCATGCTTGCAAAGCTTTTGGATATGCCGTaGGAGAAAGAAGGCAGACGAGTGGCTGTCCAAACA | + |
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Preference number: 6 (lower is better) Translates to: PLRMLAKLLDMP*EKEGRRVAVQT Trigger: TGTTTGGACAGCCACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGCATGCGTAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000204093.3 |
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| CDS CAA 72 bp | ATCTCCCACAGAGAGACATCGGCACTTGCAAAGCTTTaGGATATGCCGTGGGAGAAAGAAGGCAGACGAGTG | + |
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Preference number: 6 (lower is better) Translates to: ISHRETSALAKL*DMPWEKEGRRV Trigger: CACTCGTCTGCCTTCTTTCTCCCACGGCATATCCAAAAGCTTTGCAAGTGCCGATGTCTCTCTGTGGGAGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000204500.3 |
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