Pregenerated sensors for SC5D (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032018Ensembl transcript IDs: ENSMUST00000052725.15, ENSMUST00000169609.2, ENSMUST00000217513.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTTGTGCTTGATCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGTaGGAGAGAGCAAGGGTGCGAAGGGCAACTGCTCTGACTCACATG | + |
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Preference number: 1 (lower is better) Translates to: FVLDPTGRQRLSPRG*ERARVRRATALTHM Trigger: CATGTGAGTCAGAGCAGTTGCCCTTCGCACCCTTGCTCTCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 90 bp | CAACCATCACAGAACCCAGAAAACAGGAGCCACCGTCTTTGTGCTTaGTCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGTGGGAGAG | + |
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Preference number: 1 (lower is better) Translates to: QPSQNPENRSHRLCA*SYWAAATQPPWVGE Trigger: CTCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTGTGATGGTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 90 bp | ACCTCAACCATCACAGAACCCAGAAAACAGGAGCCACCGTCTTTGTaGTTGATCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGTGGG | + |
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Preference number: 1 (lower is better) Translates to: TSTITEPRKQEPPSL*LILLGGSDSAPVGG Trigger: CCCACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTGTGATGGTTGAGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 90 bp | CTAGAGACTTGCAGCATCTTCCCTGGTCTCTGCTCTCAATCTCTCTaGCTCCTCTTCCTTCGGGGGTTAGGGATGATGGAGATGTCCCAT | + |
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Preference number: 1 (lower is better) Translates to: LETCSIFPGLCSQSL*LLFLRGLGMMEMSH Trigger: ATGGGACATCTCCATCATCCCTAACCCCCGAAGGAAGAGGAGGCAGAGAGATTGAGAGCAGAGACCAGGGAAGATGCTGCAAGTCTCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 90 bp | TTACATATTTCTGTAACTCATCTTCATGTCTTTCACCCTCCAGCATaGAGGGAGGGCAGGCTCCTCCACCGAACTCCTACTGAGGGCCTA | + |
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Preference number: 1 (lower is better) Translates to: LHISVTHLHVFHPPA*REGRLLHRTPTEGL Trigger: TAGGCCCTCAGTAGGAGTTCGGTGGAGGAGCCTGCCCTCCCTTCATGCTGGAGGGTGAAAGACATGAAGATGAGTTACAGAAATATGTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CCA 90 bp | GCAATGAGTGATGTTTGCACACAGTGCAGTGTGACTCTGAGCATCTaGGATGCTGTCAGATTTTATAACCCACATCACCTCTACGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: AMSDVCTQCSVTLSI*DAVRFYNPHHLYAF Trigger: GAAGGCGTAGAGGTGATGTGGGTTATAAAATCTGACAGCATCCCAGATGCTCAGAGTCACACTGCACTGTGTGCAAACATCACTCATTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 90 bp | AAGCAAATCCTATCCACTGCCACTCACGTATCAGCTTGCTTGGACTaGTATTCCTATTTGAATGAAGTCCTGCAACTCCCCAGCACTTCG | + |
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Preference number: 1 (lower is better) Translates to: KQILSTATHVSACLD*YSYLNEVLQLPSTS Trigger: CGAAGTGCTGGGGAGTTGCAGGACTTCATTCAAATAGGAATATCAGTCCAAGCAAGCTGATACGTGAGTGGCAGTGGATAGGATTTGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR GCA 90 bp | AGTCAACTAACAAATGAGAAAGAGACGGTTGCAATGAGTGATGTTTaGACACAGTGCAGTGTGACTCTGAGCATCTGGGATGCTGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: SQLTNEKETVAMSDV*TQCSVTLSIWDAVR Trigger: TCTGACAGCATCCCAGATGCTCAGAGTCACACTGCACTGTGTGCAAACATCACTCATTGCAACCGTCTCTTTCTCATTTGTTAGTTGACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 90 bp | TTATCCAGATTCATGTCTGTAGGGTTATTAAACAGTGGTTTTAAATaGCACACTTCAAGCTGGGCAGTGGTGGTGCACACCTCTGATCCC | + |
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Preference number: 1 (lower is better) Translates to: LSRFMSVGLLNSGFK*HTSSWAVVVHTSDP Trigger: GGGATCAGAGGTGTGCACCACCACTGCCCAGCTTGAAGTGTGTCATTTAAAACCACTGTTTAATAACCCTACAGACATGAATCTGGATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 90 bp | AATTGTACTGCCGGGTCAGAAGACGAGAGCCACAGACTCAGTGCCTaGCTTAATAGATGGACGTGCACTAAGTTTCTATTTGTTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: NCTAGSEDESHRLSA*LNRWTCTKFLFVSL Trigger: TAAAGAAACAAATAGAAACTTAGTGCACGTCCATCTATTAAGTCAGGCACTGAGTCTGTGGCTCTCGTCTTCTGACCCGGCAGTACAATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CCA 90 bp | AGGACCATCCCTCAGCATGACACTCAAGCAATGCTGACATTCCAATaGCACCACTTATTTGCTAGGTATCTTGACTGTGTAGATTATTTT | + |
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Preference number: 1 (lower is better) Translates to: RTIPQHDTQAMLTFQ*HHLFARYLDCVDYF Trigger: AAAATAATCTACACAGTCAAGATACCTAGCAAATAAGTGGTGCCATTGGAATGTCAGCATTGCTTGAGTGTCATGCTGAGGGATGGTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGGCAGCGACTCAGCCCCCGTGGGTGGGAGAGAGCAAGGGTGCGAAGGGCTCAAAAGCTCCCAGCTaGAGGTGGGACCCTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: WAAATQPPWVGESKGAKGSKAPS*RWDPLN Trigger: GTTGAGAGGGTCCCACCTCCAGCTGGGAGCTTTTGA...GCCCTTCGCACCCTTGCTCTCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | TGGGCGGCAGCGACTCAGCCCCCGTGGGTGGGAGAGAGCAAGGGTGCGAAGGGCTGTCCCATTTGGTGGTaGTGGTGGGATGGGGTTTAC | + |
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Preference number: 2 (lower is better) Translates to: WAAATQPPWVGESKGAKGCPIWW*WWDGVY Trigger: GTAAACCCCATCCCACCACCACCACCAAATGGGACA...GCCCTTCGCACCCTTGCTCTCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CAA 90 bp | CCGACCTCAACCATCACAGAACCCAGAAAACAGGAGCCACCGTCTTaGTGCTTGATCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGT | + |
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Preference number: 2 (lower is better) Translates to: PTSTITEPRKQEPPS*CLILLGGSDSAPVG Trigger: ACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTGTGATGGTTGAGGTCGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CAA 90 bp | TCAACCATCACAGAACCCAGAAAACAGGAGCCACCGTCTTTGTGCTaGATCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGTGGGAGA | + |
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Preference number: 2 (lower is better) Translates to: STITEPRKQEPPSLC*ILLGGSDSAPVGGR Trigger: TCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTGTGATGGTTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR TCA 90 bp | CTACGCCTTCAAAGTGACCCCAATGCACAAAGGACGTTTTGTGCTATAACATTTGGTGGTGCACACCTCTaGTCCCAGCAAGGGCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: LRLQSDPNAQRTFCAITFGGAHL*SQQGQA Trigger: TGCCTGCCCTTGCTGGGATCAGAGGTGTGCACCACC...AAATGTTATAGCACAAAACGTCCTTTGTGCATTGGGGTCACTTTGAAGGCGTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR TCA 90 bp | ATCTCTCTGCCTCCTCTTCCTTCGGGGGTTAGGGATGATGGAGATGTCCCATTTAAGTCAACTAACAAATaGGAAAGAGACGGTTGCAAT | + |
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Preference number: 2 (lower is better) Translates to: ISLPPLPSGVRDDGDVPFKSTNK*ERDGCN Trigger: ATTGCAACCGTCTCTTTCTCATTTGTTAGTTGACTT...AAATGGGACATCTCCATCATCCCTAACCCCCGAAGGAAGAGGAGGCAGAGAGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTCCCATTTGGTGGTGGTaGTGGGATGGGGTTTACCGT | + |
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Preference number: 2 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSPIWWW*WDGVYR Trigger: ACGGTAAACCCCATCCCACCACCACCACCAAATGGG...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTATTTGGTGGTGGTGGTaGGATGGGGTTTACCGTTCC | + |
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Preference number: 2 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSIWWWW*DGVYRS Trigger: GGAACGGTAAACCCCATCCCACCACCACCACCAAAT...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGGTGGTGGTGGTGGGATaGGGTTTACCGTTCCTTGAT | + |
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Preference number: 2 (lower is better) Translates to: ICFFSSMLRVKFSSNEWLVVVVG*GLPFLD Trigger: ATCAAGGAACGGTAAACCCCATCCCACCACCACCAC...CAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | ATTTGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGATGTCCCATTTGGTaGTGGTGGTGGGATGGGGTT | + |
|
Preference number: 2 (lower is better) Translates to: ICFFSSMLRVKFSSNEWLRCPIW*WWWDGV Trigger: AACCCCATCCCACCACCACCACCAAATGGGACATCT...CAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR GCA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTCCCCAGAGAGTAAGGTaGCTCTGTATAGGAAGTACA | + |
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Preference number: 2 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSPQRVR*LCIGST Trigger: TGTACTTCCTATACAGAGGCACCTTACTCTCTGGGG...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | CTACGCCTTCAAAGTGACCCCAATGCACAAAGGACGTTTTGTGCTATAACATTTCTTAATGAGTATGCATaGACTAAGGCAAAAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: LRLQSDPNAQRTFCAITFLNEYA*TKAKGH Trigger: GTGTCCTTTTGCCTTAGTCCATGCATACTCATTAAG...AAATGTTATAGCACAAAACGTCCTTTGTGCATTGGGGTCACTTTGAAGGCGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTTTGCAGCATCTTCCCTaGTCTCTGCTCTCAATCTCT | + |
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Preference number: 2 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSLQHLP*SLLSIS Trigger: AGAGATTGAGAGCAGAGACCAGGGAAGATGCTGCAA...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR TCA 90 bp | ATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATCAGACTGATATTCCTATTTaGATGAAGTCCTGCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: ILLHQPLSKSYPLPLTYQTDIPI*MKSCNS Trigger: GGAGTTGCAGGACTTCATTCAAATAGGAATATCAGT...CTGATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR TCA 90 bp | CTACGCCTTCAAAGTGACCCCAATGCACAAAGGACGTTTTGTGCTATAACATTTTCAGCTTGCTTGGACTaGTATTCCTATTTGAATGAA | + |
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Preference number: 2 (lower is better) Translates to: LRLQSDPNAQRTFCAITFSACLD*YSYLNE Trigger: TTCATTCAAATAGGAATATCAGTCCAAGCAAGCTGA...AAATGTTATAGCACAAAACGTCCTTTGTGCATTGGGGTCACTTTGAAGGCGTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CCA 90 bp | ATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATCAGAAGACAAGTTGTTCCTaGACCAATGTCGGACAATTA | + |
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Preference number: 2 (lower is better) Translates to: ILLHQPLSKSYPLPLTYQKTSCS*TNVGQL Trigger: TAATTGTCCGACATTGGTCCAGGAACAACTTGTCTT...CTGATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR TCA 90 bp | TATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCCACAGACCAGCTTCTTaGGTAGCTTATTTTCTATCG | + |
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Preference number: 2 (lower is better) Translates to: YRKYNLITSAIKQILSTAHRPAS*VAYFLS Trigger: CGATAGAAAATAAGCTACTCAAGAAGCTGGTCTGTG...GGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR TCA 90 bp | TACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTAACTGATATTCCTATTTaGATGAAGTCCTGCAACTCC | + |
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Preference number: 2 (lower is better) Translates to: YNLITSAIKQILSTATHVTDIPI*MKSCNS Trigger: GGAGTTGCAGGACTTCATTCAAATAGGAATATCAGT...TACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATCTTAATGAGTATGCATaGACTAAGGCAAAAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: TILLHQPLSKSYPLPLTYLNEYA*TKAKGH Trigger: GTGTCCTTTTGCCTTAGTCCATGCATACTCATTAAG...ATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR TCA 90 bp | ATTTGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGCACAGACCAGCTTCTTaGGTAGCTTATTTTCTATCG | + |
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Preference number: 2 (lower is better) Translates to: ICFFSSMLRVKFSSNEWLHRPAS*VAYFLS Trigger: CGATAGAAAATAAGCTACTCAAGAAGCTGGTCTGTG...CAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CCA 72 bp | GATCCTACTGGGCGGCAGCGACTCAGCCCCCGTGGGTaGGAGAGAGCAAGGGTGCGAAGGGCAACTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: DPTGRQRLSPRG*ERARVRRATAL Trigger: CAGAGCAGTTGCCCTTCGCACCCTTGCTCTCTCCCACCCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 72 bp | CAGAACCCAGAAAACAGGAGCCACCGTCTTTGTGCTTaGTCCTACTGGGCGGCAGCGACTCAGCCCCCGTGG | + |
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Preference number: 3 (lower is better) Translates to: QNPENRSHRLCA*SYWAAATQPPW Trigger: CCACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 72 bp | GGTGGGAGAGAGCAAGGGTGCGAAGGGCAACTGCTCTaGCTCACATGTCCTAACTCTTGGGGACTCCTGAGG | + |
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Preference number: 3 (lower is better) Translates to: GGREQGCEGQLL*LTCPNSWGLLR Trigger: CCTCAGGAGTCCCCAAGAGTTAGGACATGTGAGTCAGAGCAGTTGCCCTTCGCACCCTTGCTCTCTCCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 72 bp | ATGAAGGGAGGGCAGGCTCCTCCACCGAACTCCTACTaGGGGCCTAGCAGAAGACCGACCTCAACCATCACA | + |
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Preference number: 3 (lower is better) Translates to: MKGGQAPPPNSY*GPSRRPTSTIT Trigger: TGTGATGGTTGAGGTCGGTCTTCTGCTAGGCCCTCAGTAGGAGTTCGGTGGAGGAGCCTGCCCTCCCTTCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 72 bp | TGCAGCATCTTCCCTGGTCTCTGCTCTCAATCTCTCTaGCTCCTCTTCCTTCGGGGGTTAGGGATGATGGAG | + |
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Preference number: 3 (lower is better) Translates to: CSIFPGLCSQSL*LLFLRGLGMME Trigger: CTCCATCATCCCTAACCCCCGAAGGAAGAGGAGGCAGAGAGATTGAGAGCAGAGACCAGGGAAGATGCTGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR-3UTR CAA 90 bp | AACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCATCTTCATAATGGCACCACTTATTaGCTAGGTATCTTGACTGTG | + |
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Preference number: 3 (lower is better) Translates to: NSPALRWSQPLPGQDHLHNGTTY*LGILTV Trigger: CACAGTCAAGATACCTAGCAAATAAGTGGTGCCATT...ATGAAGATGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR-3UTR CAA 90 bp | CAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCATCTTCAACACAGACCAGCTTCTaGAGTAGCTTATTTTCTATC | + |
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Preference number: 3 (lower is better) Translates to: QLPSTSVEPAAPGTGPSSTQTSF*SSLFSI Trigger: GATAGAAAATAAGCTACTCAAGAAGCTGGTCTGTGT...TGAAGATGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR CCA 72 bp | ACAGTGGTTTTAAATGACACACTTCAAGCTGGGCAGTaGTGGTGCACACCTCTGATCCCAGCAAGGGCAGGC | + |
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Preference number: 3 (lower is better) Translates to: TVVLNDTLQAGQ*WCTPLIPARAG Trigger: GCCTGCCCTTGCTGGGATCAGAGGTGTGCACCACCACTGCCCAGCTTGAAGTGTGTCATTTAAAACCACTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 72 bp | ATGCTTCAGAGCTGTACAGGCTGCAGGTCAGCCGGCTaGAAAGACAAGTTGTTCCTGGACCAATGTCGGACA | + |
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Preference number: 3 (lower is better) Translates to: MLQSCTGCRSAG*KDKLFLDQCRT Trigger: TGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGGCTGACCTGCAGCCTGTACAGCTCTGAAGCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR TCA 72 bp | TCTGTAACTCATCTTCATGTCTTTCACCCTCCAGCATaGAGGGAGGGCAGGCTCCTCCACCGAACTCCTACT | + |
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Preference number: 3 (lower is better) Translates to: SVTHLHVFHPPA*REGRLLHRTPT Trigger: AGTAGGAGTTCGGTGGAGGAGCCTGCCCTCCCTTCATGCTGGAGGGTGAAAGACATGAAGATGAGTTACAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 72 bp | GTTTTAAATGACACACTTCAAGCTGGGCAGTGGTGGTaGACACCTCTGATCCCAGCAAGGGCAGGCAGATCT | + |
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Preference number: 3 (lower is better) Translates to: VLNDTLQAGQWW*TPLIPARAGRS Trigger: AGATCTGCCTGCCCTTGCTGGGATCAGAGGTGTGCACCACCACTGCCCAGCTTGAAGTGTGTCATTTAAAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 72 bp | TCAGAACAGGCCTTGGCCTGGGAGGTAACCCAGTGGTaGAAAAGCAACTTAGAGATTGCACCACTGCAAACG | + |
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Preference number: 3 (lower is better) Translates to: SEQALAWEVTQW*KSNLEIAPLQT Trigger: CGTTTGCAGTGGTGCAATCTCTAAGTTGCTTTTGCACCACTGGGTTACCTCCCAGGCCAAGGCCTGTTCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 72 bp | GGAGGTAACCCAGTGGTGCAAAAGCAACTTAGAGATTaGACCACTGCAAACGGACTCTCCCTTCTCAAGCAA | + |
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Preference number: 3 (lower is better) Translates to: GGNPVVQKQLRD*TTANGLSLLKQ Trigger: TTGCTTGAGAAGGGAGAGTCCGTTTGCAGTGGTGCAATCTCTAAGTTGCTTTTGCACCACTGGGTTACCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR GCA 72 bp | TGGCACTGGTATAGAAATGTCAAGACAGAATTGTACTaGCGGGTCAGAAGACGAGAGCCACAGACTCAGTGC | + |
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Preference number: 3 (lower is better) Translates to: WHWYRNVKTELY*RVRRREPQTQC Trigger: GCACTGAGTCTGTGGCTCTCGTCTTCTGACCCGGCAGTACAATTCTGTCTTGACATTTCTATACCAGTGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR TCA 72 bp | CTCACGTATCAGCTTGCTTGGACTGATATTCCTATTTaGATGAAGTCCTGCAACTCCCCAGCACTTCGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LTYQLAWTDIPI*MKSCNSPALRW Trigger: CCACCGAAGTGCTGGGGAGTTGCAGGACTTCATTCAAATAGGAATATCAGTCCAAGCAAGCTGATACGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| 3UTR GCA 72 bp | AAAGAGACGGTTGCAATGAGTGATGTTTGCACACAGTaGAGTGTGACTCTGAGCATCTGGGATGCTGTCAGA | + |
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Preference number: 3 (lower is better) Translates to: KETVAMSDVCTQ*SVTLSIWDAVR Trigger: TCTGACAGCATCCCAGATGCTCAGAGTCACACTGCACTGTGTGCAAACATCACTCATTGCAACCGTCTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
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| 3UTR CCA 72 bp | GGATCTGTCTGTCTTGACCAGGAGTGGTGTTGGCACTaGTATAGAAATGTCAAGACAGAATTGTACTGCCGG | + |
|
Preference number: 3 (lower is better) Translates to: GSVCLDQEWCWH*YRNVKTELYCR Trigger: CCGGCAGTACAATTCTGTCTTGACATTTCTATACCAGTGCCAACACCACTCCTGGTCAAGACAGACAGATCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR TCA 72 bp | TCAGGACCATCCCTCAGCATGACACTCAAGCAATGCTaGCATTCCAATGGCACCACTTATTTGCTAGGTATC | + |
|
Preference number: 3 (lower is better) Translates to: SGPSLSMTLKQC*HSNGTTYLLGI Trigger: GATACCTAGCAAATAAGTGGTGCCATTGGAATGTCAGCATTGCTTGAGTGTCATGCTGAGGGATGGTCCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| 3UTR TCA 72 bp | CTATCCACTGCCACTCACGTATCAGCTTGCTTGGACTaGTATTCCTATTTGAATGAAGTCCTGCAACTCCCC | + |
|
Preference number: 3 (lower is better) Translates to: LSTATHVSACLD*YSYLNEVLQLP Trigger: GGGGAGTTGCAGGACTTCATTCAAATAGGAATATCAGTCCAAGCAAGCTGATACGTGAGTGGCAGTGGATAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| 3UTR CCA 72 bp | GATGTTTGCACACAGTGCAGTGTGACTCTGAGCATCTaGGATGCTGTCAGATTTTATAACCCACATCACCTC | + |
|
Preference number: 3 (lower is better) Translates to: DVCTQCSVTLSI*DAVRFYNPHHL Trigger: GAGGTGATGTGGGTTATAAAATCTGACAGCATCCCAGATGCTCAGAGTCACACTGCACTGTGTGCAAACATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTCAATCAGAACAGGCCTaGGCCTGGGAGGTAACCCAG | + |
|
Preference number: 3 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSQSEQA*AWEVTQ Trigger: CTGGGTTACCTCCCAGGCCAAGGCCTGTTCTGATTG...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR TCA 72 bp | TTTGGTGGTGGTGGTGGGATGGGGTTTACCGTTCCTTaGTGTAGTACCAAACAGTGTATCTTAAGGATCCTT | + |
|
Preference number: 3 (lower is better) Translates to: FGGGGGMGFTVP*CSTKQCILRIL Trigger: AAGGATCCTTAAGATACACTGTTTGGTACTACATCAAGGAACGGTAAACCCCATCCCACCACCACCACCAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR TCA 72 bp | GGCTTCATGAGAGGGCACACACAGCTTCAAGCCAAATaGCTCATTTCTGATAGCATCATCCTATGTCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: GFMRGHTQLQAK*LISDSIILCQV Trigger: AACCTGACATAGGATGATGCTATCAGAAATGAGTCATTTGGCTTGAAGCTGTGTGTGCCCTCTCATGAAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR GCA 72 bp | ACAAATGAGAAAGAGACGGTTGCAATGAGTGATGTTTaGACACAGTGCAGTGTGACTCTGAGCATCTGGGAT | + |
|
Preference number: 3 (lower is better) Translates to: TNEKETVAMSDV*TQCSVTLSIWD Trigger: ATCCCAGATGCTCAGAGTCACACTGCACTGTGTGCAAACATCACTCATTGCAACCGTCTCTTTCTCATTTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR CCA 72 bp | CCTCAGCATGACACTCAAGCAATGCTGACATTCCAATaGCACCACTTATTTGCTAGGTATCTTGACTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: PQHDTQAMLTFQ*HHLFARYLDCV Trigger: TACACAGTCAAGATACCTAGCAAATAAGTGGTGCCATTGGAATGTCAGCATTGCTTGAGTGTCATGCTGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATAATGGCACCACTTATTaGCTAGGTATCTTGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: TILLHQPLSKSYPLPLTYNGTTY*LGILTV Trigger: CACAGTCAAGATACCTAGCAAATAAGTGGTGCCATT...ATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| 3UTR-3UTR CAA 90 bp | TGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGAGTACACAGACCAGCTTCTaGAGTAGCTTATTTTCTATC | + |
|
Preference number: 3 (lower is better) Translates to: CFFSSMLRVKFSSNEWLSTQTSF*SSLFSI Trigger: GATAGAAAATAAGCTACTCAAGAAGCTGGTCTGTGT...ACTCAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR CAA 72 bp | ACAGAACCCAGAAAACAGGAGCCACCGTCTTTGTGCTaGATCCTACTGGGCGGCAGCGACTCAGCCCCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEPRKQEPPSLC*ILLGGSDSAPV Trigger: CACGGGGGCTGAGTCGCTGCCGCCCAGTAGGATCAAGCACAAAGACGGTGGCTCCTGTTTTCTGGGTTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR CCA 90 bp | GTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCAGACTTGCAAACGGCGTaGGGATCTTCCAAATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: VLQLPSTSVEPAAPGTGPDLQTA*GSSKYD Trigger: ATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTC...TGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | GTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCAGGGATCTTCCAAATATaGTGTGGTTTATGTATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VLQLPSTSVEPAAPGTGPGIFQI*CGLCMR Trigger: GCGCATACATAAACCACATCATATTTGGAAGATCCC...TGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | AAGTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACGACCACCTTGTGCAGTaGAAAGACAAAGGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: KSCNSPALRWSQPLPGQDDHLVQ*KDKGVY Trigger: ATATACCCCTTTGTCTTTCCACTGCACAAGGTGGTC...GTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | AATGAAGTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACATGGTGGTCTGTGTGGTaGGCTGACCCGTTAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: NEVLQLPSTSVEPAAPGTWWSVW*ADPLIN Trigger: ATTTATTAACGGGTCAGCTCACCACACAGACCACCA...TGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGACTTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | AACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCATCTTCATGATATACATACGGAGTaGAGAAGTAGTAATCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: NSPALRWSQPLPGQDHLHDIHTE*RSSNRR Trigger: CCGCCGATTACTACTTCTTCACTCCGTATGTATATC...ATGAAGATGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | AATGAAGTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAAATGGCCTTAAGATCTaGGGAACCCGAAAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: NEVLQLPSTSVEPAAPGTNGLKI*GTRKSP Trigger: TGGTGATTTTCGGGTTCCCCAGATCTTAAGGCCATT...TGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGACTTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR GCA 90 bp | AAGTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACATAATAGCTGAGGGTTaGACAGAAGAAGTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: KSCNSPALRWSQPLPGQDIIAEG*TEEVEN Trigger: ATTCTCTACTTCTTCTGTGCAACCCTCAGCTATTAT...GTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | GGTCAGCCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCCTCCAGCAGGAACAGTaGGACGGTGGGGATGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: GQPAEKTSCSWTNVGQLTLQQEQ*DGGDAD Trigger: ATCAGCATCCCCACCGTCTCACTGTTCCTGCTGGAG...GGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGGCTGACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | ATCTCTCTGCCTCCTCTTCCTTCGGGGGTTAGGGATGATGGAGATGTCCCATTTTGTCCTCGGGCCACGTaGCTGGATATACATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLPPLPSGVRDDGDVPFCPRAT*LDIHTE Trigger: CTCCGTATGTATATCCAGCCACGTGGCCCGAGGACA...AAATGGGACATCTCCATCATCCCTAACCCCCGAAGGAAGAGGAGGCAGAGAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR CAA 72 bp | GCTTACGAGCACAAAGGCCCCCTCATGTCTAGAGACTaGCAGCATCTTCCCTGGTCTCTGCTCTCAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYEHKGPLMSRD*QHLPWSLLSIS Trigger: AGAGATTGAGAGCAGAGACCAGGGAAGATGCTGCAAGTCTCTAGACATGAGGGGGCCTTTGTGCTCGTAAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR TCA 90 bp | AACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCATCTTCATCGAAAATCACCATCATaGATAGAAATTGTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: NSPALRWSQPLPGQDHLHRKSPS*IEIVQT Trigger: TGTCTGGACAATTTCTATTCATGATGGTGATTTTCG...ATGAAGATGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | CCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCAAGCGAGTCTGTGTGGTGAGCTaGCCCGTTAATAAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: PAEKTSCSWTNVGQLTKRVCVVS*PVNKWP Trigger: AGGCCATTTATTAACGGGTCAGCTCACCACACAGAC...TCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | TTCCCGCTGTTTACTGTCAGGACCATCCCTCAGCATGACACTCAAGCAATGCTGGACTTGCAAACGGCGTaGGGATCTTCCAAATATGAT | + |
|
Preference number: 4 (lower is better) Translates to: FPLFTVRTIPQHDTQAMLDLQTA*GSSKYD Trigger: ATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTC...CAGCATTGCTTGAGTGTCATGCTGAGGGATGGTCCTGACAGTAAACAGCGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| 3UTR CAA 72 bp | TGGTGTTGGCACTGGTATAGAAATGTCAAGACAGAATaGTACTGCCGGGTCAGAAGACGAGAGCCACAGACT | + |
|
Preference number: 4 (lower is better) Translates to: WCWHWYRNVKTE*YCRVRRREPQT Trigger: AGTCTGTGGCTCTCGTCTTCTGACCCGGCAGTACAATTCTGTCTTGACATTTCTATACCAGTGCCAACACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| 3UTR CAA 72 bp | TGCATGCGCTATGCACTGGTTAAGGATCTGTCTGTCTaGACCAGGAGTGGTGTTGGCACTGGTATAGAAATG | + |
|
Preference number: 4 (lower is better) Translates to: CMRYALVKDLSV*TRSGVGTGIEM Trigger: CATTTCTATACCAGTGCCAACACCACTCCTGGTCAAGACAGACAGATCCTTAACCAGTGCATAGCGCATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR GCA 90 bp | CCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCAAGCGAGTGAAAAGCATGACTTaGAAACGGCGTGGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: PAEKTSCSWTNVGQLTKRVKSMT*KRRGDL Trigger: AAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCAC...TCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | CCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCAAGCGAGACCACCTTGTGCAGTaGAAAGACAAAGGGGTATAT | + |
|
Preference number: 4 (lower is better) Translates to: PAEKTSCSWTNVGQLTKRDHLVQ*KDKGVY Trigger: ATATACCCCTTTGTCTTTCCACTGCACAAGGTGGTC...TCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | GCCCCAGAGAGTAAGGTGCCTCTGTATAGGAAGTACAATCTTATTACATCAGCCAATGGCCTTAAGATCTaGGGAACCCGAAAATCACCA | + |
|
Preference number: 4 (lower is better) Translates to: APESKVPLYRKYNLITSANGLKI*GTRKSP Trigger: TGGTGATTTTCGGGTTCCCCAGATCTTAAGGCCATT...GGCTGATGTAATAAGATTGTACTTCCTATACAGAGGCACCTTACTCTCTGGGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCATGTCCTCGGGCCACGTaGCTGGATATACATACGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LCIGSTILLHQPLSKSYPCPRAT*LDIHTE Trigger: CTCCGTATGTATATCCAGCCACGTGGCCCGAGGACA...TGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | ACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATTGGTGGTCTGTGTGGTaGGCTGACCCGTTAATAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TILLHQPLSKSYPLPLTYWWSVW*ADPLIN Trigger: ATTTATTAACGGGTCAGCTCACCACACAGACCACCA...ATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR GCA 90 bp | CCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCAAGCGATTTACAGCCGTTTTCTaGAAAGCTGTTAGATTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PAEKTSCSWTNVGQLTKRFTAVF*KAVRFF Trigger: AAAGAATCTAACAGCTTTGCAGAAAACGGCTGTAAA...TCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | CTACGCCTTCAAAGTGACCCCAATGCACAAAGGACGTTTTGTGCTATAACATTTAGACAAAATAATAGCTaGGGGTTGCACAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: LRLQSDPNAQRTFCAITFRQNNS*GLHRRS Trigger: ACTTCTTCTGTGCAACCCTCAGCTATTATTTTGTCT...AAATGTTATAGCACAAAACGTCCTTTGTGCATTGGGGTCACTTTGAAGGCGTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR TCA 90 bp | ATGCCCCAGAGAGTAAGGTGCCTCTGTATAGGAAGTACAATCTTATTACATCAGAGACAAAATAATAGCTaGGGGTTGCACAGAAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MPQRVRCLCIGSTILLHQRQNNS*GLHRRS Trigger: ACTTCTTCTGTGCAACCCTCAGCTATTATTTTGTCT...CTGATGTAATAAGATTGTACTTCCTATACAGAGGCACCTTACTCTCTGGGGCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | ATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATCAGGGGATCTTCCAAATATaGTGTGGTTTATGTATGCGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLHQPLSKSYPLPLTYQGIFQI*CGLCMR Trigger: GCGCATACATAAACCACATCATATTTGGAAGATCCC...CTGATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGGTCTGTGTGGTGAGCTaGCCCGTTAATAAATGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ICFFSSMLRVKFSSNEWLVCVVS*PVNKWP Trigger: AGGCCATTTATTAACGGGTCAGCTCACCACACAGAC...CAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR GCA 90 bp | ATTTGTTTCTTTAGCAGCATGTTAAGGGTCAAATTTTCATCCAATGAATGGCTGGTGAAAAGCATGACTTaGAAACGGCGTGGGGATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICFFSSMLRVKFSSNEWLVKSMT*KRRGDL Trigger: AAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCAC...CAGCCATTCATTGGATGAAAATTTGACCCTTAACATGCTGCTAAAGAAACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000052725.15 |
||
| CDS-3UTR CCA 90 bp | TACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTAATCTCACGCGAGACTTaGTTCTTTAAAAACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YNLITSAIKQILSTATHVISRET*FFKNCG Trigger: CCCACAGTTTTTAAAGAACCAAGTCTCGCGTGAGAT...TACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | CTCTGTATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCAGATATACATACGGAGTaGAGAAGTAGTAATCGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: LCIGSTILLHQPLSKSYPDIHTE*RSSNRR Trigger: CCGCCGATTACTACTTCTTCACTCCGTATGTATATC...TGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | TACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTACTTCACGTAACTATGTaGTCCTTTCCCTTCAAAAGA | + |
|
Preference number: 4 (lower is better) Translates to: YNLITSAIKQILSTATHVLHVTM*SFPFKR Trigger: TCTTTTGAAGGGAAAGGACCACATAGTTACGTGAAG...TACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR TCA 90 bp | ACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCACTGCCACTCACGTATCGAAAATCACCATCATaGATAGAAATTGTCCAGACA | + |
|
Preference number: 4 (lower is better) Translates to: TILLHQPLSKSYPLPLTYRKSPS*IEIVQT Trigger: TGTCTGGACAATTTCTATTCATGATGGTGATTTTCG...ATACGTGAGTGGCAGTGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | CTCTGTATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATCCAATCTCACGCGAGACTTaGTTCTTTAAAAACTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LCIGSTILLHQPLSKSYPISRET*FFKNCG Trigger: CCCACAGTTTTTAAAGAACCAAGTCTCGCGTGAGAT...TGGATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTGTATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATATGAATCCAGCCATTTaGAAAGTCTCCGATGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: CLCIGSTILLHQPLSKSYMNPAI*KVSDVI Trigger: GATGACATCGGAGACTTTCCAAATGGCTGGATTCAT...ATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAGGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTGTATAGGAAGTACAATCTTATTACATCAGCCATTAAGCAAATCCTATATAATAGCTGAGGGTTaGACAGAAGAAGTAGAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: CLCIGSTILLHQPLSKSYIIAEG*TEEVEN Trigger: ATTCTCTACTTCTTCTGTGCAACCCTCAGCTATTAT...ATAGGATTTGCTTAATGGCTGATGTAATAAGATTGTACTTCCTATACAGAGGCA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS-3UTR CAA 90 bp | GTCCTGCAACTCCCCAGCACTTCGGTGGAGCCAGCCGCTCCCGGGACAGGACCAGGTGAAAAGCATGACTaGCAAACGGCGTGGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: VLQLPSTSVEPAAPGTGPGEKHD*QTAWGS Trigger: AGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACC...TGGTCCTGTCCCGGGAGCGGCTGGCTCCACCGAAGTGCTGGGGAGTTGCAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS TCA 90 bp | GTCATCGTAGAGTTTGCTGTAACCCCTCAGCTCCAGCAGGAACAGTaGGACGGTGGGGATGCTGATCCAAGGCAAAGACTTGACAGTGAA | + |
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Preference number: 5 (lower is better) Translates to: VIVEFAVTPQLQQEQ*DGGDADPRQRLDSE Trigger: TTCACTGTCAAGTCTTTGCCTTGGATCAGCATCCCCACCGTCTCACTGTTCCTGCTGGAGCTGAGGGGTTACAGCAAACTCTACGATGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS-3UTR CAA 90 bp | CCGGCTGAAAAGACAAGTTGTTCCTGGACCAATGTCGGACAATTAACCAAGCGAGGTGAAAAGCATGACTaGCAAACGGCGTGGGGATCT | + |
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Preference number: 5 (lower is better) Translates to: PAEKTSCSWTNVGQLTKRGEKHD*QTAWGS Trigger: AGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACC...TCGCTTGGTTAATTGTCCGACATTGGTCCAGGAACAACTTGTCTTTTCAGCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS GCA 90 bp | TTGCAAACGGCGTGGGGATCTTCCAAATATGATGTGGTTTATGTATaGGCTTGTAGACCAGTCTGTGGTGCAGGCCCCTATGAATCCAGT | + |
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Preference number: 5 (lower is better) Translates to: LQTAWGSSKYDVVYV*ACRPVCGAGPYESS Trigger: ACTGGATTCATAGGGGCCTGCACCACAGACTGGTCTACAAGCGCATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS GCA 90 bp | AGGCAGACTCTGAAGGAAGCCGTCCACAGGGTGAAAAGCATGACTTaGAAACGGCGTGGGGATCTTCCAAATATGATGTGGTTTATGTAT | + |
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Preference number: 5 (lower is better) Translates to: RQTLKEAVHRVKSMT*KRRGDLPNMMWFMY Trigger: ATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACCCTGTGGACGGCTTCCTTCAGAGTCTGCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CCA 90 bp | GAAGGAAGCCGTCCACAGGGTGAAAAGCATGACTTGCAAACGGCGTaGGGATCTTCCAAATATGATGTGGTTTATGTATGCGCTTGTAGA | + |
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Preference number: 5 (lower is better) Translates to: EGSRPQGEKHDLQTA*GSSKYDVVYVCACR Trigger: TCTACAAGCGCATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACCCTGTGGACGGCTTCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CCA 90 bp | AAAGAGGAAGGATACGACGCTAACCATGAGATGAATCCAGCCATTTaGAAAGTCTCCGATGTCATCGTAGAGTTTGCTGTAACCCCTCAG | + |
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Preference number: 5 (lower is better) Translates to: KEEGYDANHEMNPAI*KVSDVIVEFAVTPQ Trigger: CTGAGGGGTTACAGCAAACTCTACGATGACATCGGAGACTTTCCAAATGGCTGGATTCATCTCATGGTTAGCGTCGTATCCTTCCTCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS TCA 90 bp | TTAATAAATGGCCTTAAGATCTGGGGAACCCGAAAATCACCATCATaGATAGAAATTGTCCAGACATTAACCAAGACATATAAACCTAAG | + |
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Preference number: 5 (lower is better) Translates to: LINGLKIWGTRKSPS*IEIVQTLTKTYKPK Trigger: CTTAGGTTTATATGTCTTGGTTAATGTCTGGACAATTTCTATTCATGATGGTGATTTTCGGGTTCCCCAGATCTTAAGGCCATTTATTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS CAA 72 bp | AGTGAGACGGTGGGGATGCTGATCCAAGGCAAAGACTaGACAGTGAACACGATCTCACGCGAGACTTGGTTC | + |
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Preference number: 6 (lower is better) Translates to: SETVGMLIQGKD*TVNTISRETWF Trigger: GAACCAAGTCTCGCGTGAGATCGTGTTCACTGTCAAGTCTTTGCCTTGGATCAGCATCCCCACCGTCTCACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CAA 90 bp | CCCAGGTTTGTGACAATCAGGAGGCTAATAGTTTGTCGGATGATGTaGTCCTCGGGCCACGTGGCTGGATATACATACGGAGTGAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: PRFVTIRRLIVCRMM*SSGHVAGYTYGVKK Trigger: CTTCTTCACTCCGTATGTATATCCAGCCACGTGGCCCGAGGACAACATCATCCGACAAACTATTAGCCTCCTGATTGTCACAAACCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CAA 72 bp | GTGACAATCAGGAGGCTAATAGTTTGTCGGATGATGTaGTCCTCGGGCCACGTGGCTGGATATACATACGGA | + |
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Preference number: 6 (lower is better) Translates to: VTIRRLIVCRMM*SSGHVAGYTYG Trigger: TCCGTATGTATATCCAGCCACGTGGCCCGAGGACAACATCATCCGACAAACTATTAGCCTCCTGATTGTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CAA 90 bp | GAGAATGTAAGCACCCAGGTTTGTGACAATCAGGAGGCTAATAGTTaGTCGGATGATGTTGTCCTCGGGCCACGTGGCTGGATATACATA | + |
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Preference number: 6 (lower is better) Translates to: ENVSTQVCDNQEANS*SDDVVLGPRGWIYI Trigger: TATGTATATCCAGCCACGTGGCCCGAGGACAACATCATCCGACAAACTATTAGCCTCCTGATTGTCACAAACCTGGGTGCTTACATTCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CAA 90 bp | AAGGCAGACTCTGAAGGAAGCCGTCCACAGGGTGAAAAGCATGACTaGCAAACGGCGTGGGGATCTTCCAAATATGATGTGGTTTATGTA | + |
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Preference number: 6 (lower is better) Translates to: KADSEGSRPQGEKHD*QTAWGSSKYDVVYV Trigger: TACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACCCTGTGGACGGCTTCCTTCAGAGTCTGCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CCA 72 bp | ACTTGCAAACGGCGTGGGGATCTTCCAAATATGATGTaGTTTATGTATGCGCTTGTAGACCAGTCTGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: TCKRRGDLPNMM*FMYALVDQSVV Trigger: CACCACAGACTGGTCTACAAGCGCATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CCA 72 bp | CGTCCACAGGGTGAAAAGCATGACTTGCAAACGGCGTaGGGATCTTCCAAATATGATGTGGTTTATGTATGC | + |
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Preference number: 6 (lower is better) Translates to: RPQGEKHDLQTA*GSSKYDVVYVC Trigger: GCATACATAAACCACATCATATTTGGAAGATCCCCACGCCGTTTGCAAGTCATGCTTTTCACCCTGTGGACG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS TCA 72 bp | GTGAAAAAGAGGAAGGATACGACGCTAACCATGAGATaGATCCAGCCATTTGGAAAGTCTCCGATGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: VKKRKDTTLTMR*IQPFGKSPMSS Trigger: CGATGACATCGGAGACTTTCCAAATGGCTGGATTCATCTCATGGTTAGCGTCGTATCCTTCCTCTTTTTCAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS TCA 72 bp | GGCCTTAAGATCTGGGGAACCCGAAAATCACCATCATaGATAGAAATTGTCCAGACATTAACCAAGACATAT | + |
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Preference number: 6 (lower is better) Translates to: GLKIWGTRKSPS*IEIVQTLTKTY Trigger: ATATGTCTTGGTTAATGTCTGGACAATTTCTATTCATGATGGTGATTTTCGGGTTCCCCAGATCTTAAGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS CCA 72 bp | AAAGACTTGACAGTGAACACGATCTCACGCGAGACTTaGTTCTTTAAAAACTGTGGGTGTTTCATTAAGGAA | + |
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Preference number: 6 (lower is better) Translates to: KDLTVNTISRET*FFKNCGCFIKE Trigger: TTCCTTAATGAAACACCCACAGTTTTTAAAGAACCAAGTCTCGCGTGAGATCGTGTTCACTGTCAAGTCTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 ENSMUST00000217513.2 |
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| CDS CCA 72 bp | AGATTCTTTTTCTGTCATGTTCTTCACGTAACTATGTaGTCCTTTCCCTTCAAAAGAGGAAGGATGTTTAAA | + |
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Preference number: 6 (lower is better) Translates to: RFFFCHVLHVTM*SFPFKRGRMFK Trigger: TTTAAACATCCTTCCTCTTTTGAAGGGAAAGGACCACATAGTTACGTGAAGAACATGACAGAAAAAGAATCT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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| CDS CAA 72 bp | TACTTATTCTTTGTAAACTCTCCATTGCCTACTTTTTaGCCTTTACAGCCGTTTTCTGCAAAGCTGTTAGAT | + |
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Preference number: 6 (lower is better) Translates to: YLFFVNSPLPTF*PLQPFSAKLLD Trigger: ATCTAACAGCTTTGCAGAAAACGGCTGTAAAGGCAAAAAAGTAGGCAATGGAGAGTTTACAAAGAATAAGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000052725.15 ENSMUST00000169609.2 |
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