Pregenerated sensors for SBSPON (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032719Ensembl transcript IDs: ENSMUST00000040695.5
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTCGAGTCCCAGATGAGGAAGCTGGACCAGATGACTGCAGATGCTaGGAAACAGCTTGCCATCCTAGGCCTGTGAGCACACCATGCCAC | + |
|
Preference number: 1 (lower is better) Translates to: SRVPDEEAGPDDCRC*ETACHPRPVSTPCH Trigger: GTGGCATGGTGTGCTCACAGGCCTAGGATGGCAAGCTGTTTCTCAGCATCTGCAGTCATCTGGTCCAGCTTCCTCATCTGGGACTCGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CCA 90 bp | AAACATCCTGGAGCTACCGGTAGTTGTGAGCTACCGGTAGTTCCCTaGGTGCTGAGAACTAAACCCCAGTCCTCTGTAAGAGTAATGAGC | + |
|
Preference number: 1 (lower is better) Translates to: KHPGATGSCELPVVP*VLRTKPQSSVRVMS Trigger: GCTCATTACTCTTACAGAGGACTGGGGTTTAGTTCTCAGCACCCAGGGAACTACCGGTAGCTCACAACTACCGGTAGCTCCAGGATGTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 90 bp | GTGGCCCTGAATACTAGAAGTTGGGAGGCAGAAACAGGAGATCTCTaGGTTAGAGGTCAGCCTGATCTACAGAACAAGTTCCAGGATGGC | + |
|
Preference number: 1 (lower is better) Translates to: VALNTRSWEAETGDL*VRGQPDLQNKFQDG Trigger: GCCATCCTGGAACTTGTTCTGTAGATCAGGCTGACCTCTAACTCAGAGATCTCCTGTTTCTGCCTCCCAACTTCTAGTATTCAGGGCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 90 bp | GAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTCTTaGCCTGTTCTTCCCACAAAAGCAGACAGATGTCTATTAATTAGA | + |
|
Preference number: 1 (lower is better) Translates to: EQVPGWQRLHKETLS*PVLPTKADRCLLIR Trigger: TCTAATTAATAGACATCTGTCTGCTTTTGTGGGAAGAACAGGTCAAGACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR TCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTAAGTATAGGTGGCCCTaGATACTAGAAGTTGGGAGG | + |
|
Preference number: 2 (lower is better) Translates to: HTMPLSHKLSYLPTKGKAKYRWP*ILEVGR Trigger: CCTCCCAACTTCTAGTATTCAGGGCCACCTATACTT...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR TCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTGACTGTGGTCTACCTTaGGAACTATCCCTAAATGTT | + |
|
Preference number: 2 (lower is better) Translates to: HTMPLSHKLSYLPTKGKADCGLP*ELSLNV Trigger: AACATTTAGGGATAGTTCTCAAGGTAGACCACAGTC...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR TCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTAAAGAAACTCTGTCTTaGCCTGTTCTTCCCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: HTMPLSHKLSYLPTKGKAKETLS*PVLPTK Trigger: TTTTGTGGGAAGAACAGGTCAAGACAGAGTTTCTTT...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR TCA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGAAACAGGAGATCTCTaGGTTAGAGGTCAGCCTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KYYQETFATPLSFLLATVETGDL*VRGQPD Trigger: ATCAGGCTGACCTCTAACTCAGAGATCTCCTGTTTC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTCTGAATACTAGAAGTTaGGAGGCAGAAACAGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: ILSGDICYPFKLLVGHSSLNTRS*EAETGD Trigger: ATCTCCTGTTTCTGCCTCCCAACTTCTAGTATTCAG...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR TCA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTAGCTATGTTAGTGAGTaGTTAGTCACACCAAAGGAT | + |
|
Preference number: 2 (lower is better) Translates to: ILSGDICYPFKLLVGHSSSYVSE*LVTPKD Trigger: ATCCTTTGGTGTGACTAATCACTCACTAACATAGCT...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CCA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTAGCAGTTGGCTAATTTaGTGCCAAAATGTCATGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ILSGDICYPFKLLVGHSSSSWLI*CQNVMK Trigger: TTTCATGACATTTTGGCACCAAATTAGCCAACTGCT...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CAA 90 bp | GTCCTTAACTCATTAAAAATAAAAACCAAGAGACTGTGGTCTACCTaGAGAACTATCCCTAAATGTTCTTTCTCAGTGGCAAAGCGTAGC | + |
|
Preference number: 2 (lower is better) Translates to: VLNSLKIKTKRLWST*RTIPKCSFSVAKRS Trigger: GCTACGCTTTGCCACTGAGAAAGAACATTTAGGGATAGTTCTCAAGGTAGACCACAGTCTCTTGGTTTTTATTTTTAATGAGTTAAGGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR GCA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTAGATATGTCTTATTCTaGTTCAGCCTCTATACTTTG | + |
|
Preference number: 2 (lower is better) Translates to: ILSGDICYPFKLLVGHSSRYVLF*FSLYTL Trigger: CAAAGTATAGAGGCTGAAGCAGAATAAGACATATCT...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 72 bp | GGTCCCTGGCGCAGCTTTTGGAGGCCTCGGAAGCTTTaGATGCAGCTTGTCAATACTCGGCCCATTCACACG | + |
|
Preference number: 3 (lower is better) Translates to: GPWRSFWRPRKL*MQLVNTRPIHT Trigger: CGTGTGAATGGGCCGAGTATTGACAAGCTGCATTCAAAGCTTCCGAGGCCTCCAAAAGCTGCGCCAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 72 bp | CCAGATGAGGAAGCTGGACCAGATGACTGCAGATGCTaGGAAACAGCTTGCCATCCTAGGCCTGTGAGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PDEEAGPDDCRC*ETACHPRPVST Trigger: TGTGCTCACAGGCCTAGGATGGCAAGCTGTTTCTCAGCATCTGCAGTCATCTGGTCCAGCTTCCTCATCTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CCA 72 bp | GGAGCTACCGGTAGTTGTGAGCTACCGGTAGTTCCCTaGGTGCTGAGAACTAAACCCCAGTCCTCTGTAAGA | + |
|
Preference number: 3 (lower is better) Translates to: GATGSCELPVVP*VLRTKPQSSVR Trigger: TCTTACAGAGGACTGGGGTTTAGTTCTCAGCACCCAGGGAACTACCGGTAGCTCACAACTACCGGTAGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR GCA 72 bp | GAAACAGCTTGCCATCCTAGGCCTGTGAGCACACCATaGCACTTAGCCACAAACTCAGTTATCTCCCAACCA | + |
|
Preference number: 3 (lower is better) Translates to: ETACHPRPVSTP*HLATNSVISQP Trigger: TGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTGCTCACAGGCCTAGGATGGCAAGCTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTTCCCTGGCGCAGCTTTaGGAGGCCTCGGAAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: ILSGDICYPFKLLVGHSSSLAQL*EASEAL Trigger: CAAAGCTTCCGAGGCCTCCAAAAGCTGCGCCAGGGA...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR GCA 72 bp | TGCATACCTCTTTCCATTCACTTAAGTGGTTACTTATaGCTCAGAGTGCCCGACCAAACATCCTGGAGCTAC | + |
|
Preference number: 3 (lower is better) Translates to: CIPLSIHLSGYL*LRVPDQTSWSY Trigger: GTAGCTCCAGGATGTTTGGTCGGGCACTCTGAGGCATAAGTAACCACTTAAGTGAATGGAAAGAGGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTAGACTGTGGTCTACCTaGAGAACTATCCCTAAATGT | + |
|
Preference number: 3 (lower is better) Translates to: HTMPLSHKLSYLPTKGKARLWST*RTIPKC Trigger: ACATTTAGGGATAGTTCTCAAGGTAGACCACAGTCT...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 72 bp | CCAGGATGGCAAAGGCTACACAAAGAAACTCTGTCTTaGCCTGTTCTTCCCACAAAAGCAGACAGATGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PGWQRLHKETLS*PVLPTKADRCL Trigger: TAGACATCTGTCTGCTTTTGTGGGAAGAACAGGTCAAGACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGAGGCCTCGGAAGCTTaGAATGCAGCTTGTCAATAC | + |
|
Preference number: 3 (lower is better) Translates to: KYYQETFATPLSFLLATVEASEA*NAACQY Trigger: GTATTGACAAGCTGCATTCAAAGCTTCCGAGGCCTC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR TCA 72 bp | AATACTAGAAGTTGGGAGGCAGAAACAGGAGATCTCTaGGTTAGAGGTCAGCCTGATCTACAGAACAAGTTC | + |
|
Preference number: 3 (lower is better) Translates to: NTRSWEAETGDL*VRGQPDLQNKF Trigger: GAACTTGTTCTGTAGATCAGGCTGACCTCTAACTCAGAGATCTCCTGTTTCTGCCTCCCAACTTCTAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGCCTTAAACAACAATTaGCCCCAAACTGGAGCACAT | + |
|
Preference number: 3 (lower is better) Translates to: KYYQETFATPLSFLLATVALNNN*PQTGAH Trigger: ATGTGCTCCAGTTTGGGGCAAATTGTTGTTTAAGGC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTCAAAGAAACTCTGTCTaGACCTGTTCTTCCCACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ILSGDICYPFKLLVGHSSQRNSV*TCSSHK Trigger: TTTGTGGGAAGAACAGGTCAAGACAGAGTTTCTTTG...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR-3UTR CAA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTAAGCAGTTGGCTAATTaGGTGCCAAAATGTCATGAA | + |
|
Preference number: 3 (lower is better) Translates to: ILSGDICYPFKLLVGHSSKQLAN*VPKCHE Trigger: TTCATGACATTTTGGCACCAAATTAGCCAACTGCTT...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTGCGGGCGAAGCAGGCTaGGTCCCGGCCAGGACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HTMPLSHKLSYLPTKGKAAGEAG*VPARTA Trigger: TGCTGTCCTGGCCGGGACCCAGCCTGCTTCGCCCGC...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CAA 72 bp | GTAGCAATGCGAGAGTCCAGGTCCCTGGCGCAGCTTTaGGAGGCCTCGGAAGCTTTGAATGCAGCTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VAMRESRSLAQL*EASEALNAACQ Trigger: TTGACAAGCTGCATTCAAAGCTTCCGAGGCCTCCAAAAGCTGCGCCAGGGACCTGGACTCTCGCATTGCTAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR TCA 90 bp | CCTGATCTACAGAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTAGCAGCAGTCCCCGGTaGGACGGCAGGCTTGGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: PDLQNKFQDGKGYTKKLCSSSPR*DGRLGH Trigger: GTGACCAAGCCTGCCGTCTCACCGGGGACTGCTGCT...ACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTCTGTAGATCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR GCA 90 bp | CCTGATCTACAGAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTGGGCTGGCACTGACCTaGGCAGCCACTCCAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: PDLQNKFQDGKGYTKKLCGLALT*AATPGT Trigger: AGTCCCTGGAGTGGCTGCGCAGGTCAGTGCCAGCCC...ACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTCTGTAGATCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTAAAGCAAGGGCGAGCTaGGCACGCCCTGTCGTAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HTMPLSHKLSYLPTKGKAKARAS*ARPVVV Trigger: GACTACGACAGGGCGTGCCCAGCTCGCCCTTGCTTT...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR TCA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTGGTGGGCTGGCACTaGCCTGCGCAGCCACTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYYQETFATPLSFLLATVVVGWH*PAQPLQ Trigger: CTGGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCAC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR TCA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGAGTCAGGGGACTGTTaGCCAGAGCACAGTGAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KYYQETFATPLSFLLATVESGDC*PEHSEE Trigger: CTCCTCACTGTGCTCTGGTCAACAGTCCCCTGACTC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CCA 90 bp | CCTGATCTACAGAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTGTGAGACGGCAGGCTTaGTCACAGAAGCATGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PDLQNKFQDGKGYTKKLCVRRQA*SQKHVP Trigger: TGGAACATGCTTCTGTGACCAAGCCTGCCGTCTCAC...ACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTCTGTAGATCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR TCA 90 bp | CCTGATCTACAGAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTTTCATAGCTGGTGGCTaGCAGTCTACACACACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDLQNKFQDGKGYTKKLCFIAGG*QSTHTV Trigger: CACAGTGTGTGTAGACTGTCAGCCACCAGCTATGAA...ACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTCTGTAGATCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CAA 72 bp | TCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTCTaGACCTGTTCTTCCCACAAAAGCAGACAGATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SRMAKATQRNSV*TCSSHKSRQMS Trigger: AGACATCTGTCTGCTTTTGTGGGAAGAACAGGTCAAGACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CCA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTAGAGTTCATAGCTGGTaGCTGACAGTCTACACACAC | + |
|
Preference number: 4 (lower is better) Translates to: ILSGDICYPFKLLVGHSSRVHSW*LTVYTH Trigger: GTGTGTGTAGACTGTCAGCCACCAGCTATGAACTCT...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR TCA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTATCAGGGACTCTGTCTTaGACTCCATACAGTATCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KYYQETFATPLSFLLATVSGTLS*TPYSIQ Trigger: CTGGATACTGTATGGAGTTCAAGACAGAGTCCCTGA...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR GCA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTCCACTGTGGAGATACTaGTTGTATTATTCTCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HTMPLSHKLSYLPTKGKAPLWRY*LYYSLL Trigger: AAGAAGAGAATAATACAAGCAGTATCTCCACAGTGG...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CCA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTACACAGAGTTCATAGCTaGTGGCTGACAGTCTACACA | + |
|
Preference number: 4 (lower is better) Translates to: KYYQETFATPLSFLLATVHRVHS*WLTVYT Trigger: TGTGTAGACTGTCAGCCACCAGCTATGAACTCTGTG...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CAA 72 bp | AGAGAAAGAGAAAACATAGGTGCCTTAAACAACAATTaGCCCCAAACTGGAGCACATGGTAGTGATTCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RERENIGALNNN*PQTGAHGSDSS Trigger: ACTAGAATCACTACCATGTGCTCCAGTTTGGGGCAAATTGTTGTTTAAGGCACCTATGTTTTCTCTTTCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| 3UTR CAA 72 bp | TCATTAAAAATAAAAACCAAGAGACTGTGGTCTACCTaGAGAACTATCCCTAAATGTTCTTTCTCAGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLKIKTKRLWST*RTIPKCSFSVA Trigger: TGCCACTGAGAAAGAACATTTAGGGATAGTTCTCAAGGTAGACCACAGTCTCTTGGTTTTTATTTTTAATGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 90 bp | TGTTCCATAGACCCTGTCCAGCCTCCAGCCGCGGGCGAAGCAGGCTaGGTCCCGGCCAGGACAGCAGCGGCCGGCCTCTGCACAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CSIDPVQPPAAGEAG*VPARTAAAGLCTAS Trigger: GCTGGCTGTGCAGAGGCCGGCCGCTGCTGTCCTGGCCGGGACCCAGCCTGCTTCGCCCGCGGCTGGAGGCTGGACAGGGTCTATGGAACA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 90 bp | GGCAGGGCGCCCCTCCGTTTAGTGGTTCCTGACGCACTGAACGCCTaGGCACACGCGTGGTGGGCTGGCACTGACCTGCGCAGCCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GRAPLRLVVPDALNA*AHAWWAGTDLRSHS Trigger: GGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCACGCGTGTGCGCAGGCGTTCAGTGCGTCAGGAACCACTAAACGGAGGGGCGCCCTGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 90 bp | CGTTTAGTGGTTCCTGACGCACTGAACGCCTGCGCACACGCGTGGTaGGCTGGCACTGACCTGCGCAGCCACTCCAGGGACTCCATTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RLVVPDALNACAHAW*AGTDLRSHSRDSIL Trigger: GAGAATGGAGTCCCTGGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCACGCGTGTGCGCAGGCGTTCAGTGCGTCAGGAACCACTAAACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 90 bp | CTCCGTTTAGTGGTTCCTGACGCACTGAACGCCTGCGCACACGCGTaGTGGGCTGGCACTGACCTGCGCAGCCACTCCAGGGACTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: LRLVVPDALNACAHA*WAGTDLRSHSRDSI Trigger: AATGGAGTCCCTGGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCACGCGTGTGCGCAGGCGTTCAGTGCGTCAGGAACCACTAAACGGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 90 bp | GGCGAGCTGGGCACGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTaGGACGGCAGGCTTGGTCACAGAAGCATGTTCCATAGACCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GELGTPCRSRSSSPR*DGRLGHRSMFHRPC Trigger: ACAGGGTCTATGGAACATGCTTCTGTGACCAAGCCTGCCGTCTCACCGGGGACTGCTGCTTCGACTACGACAGGGCGTGCCCAGCTCGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 90 bp | ACAGAGCTAGTTATGAAGGCAGGAACAAAGGAGTGCCCGCAGTCCTaGCTCTGTGATGACGAGTACTCCAGGCAGCCAGCTCTCTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TELVMKAGTKECPQS*LCDDEYSRQPALSS Trigger: GGAAGAGAGAGCTGGCTGCCTGGAGTACTCGTCATCACAGAGCCAGGACTGCGGGCACTCCTTTGTTCCTGCCTTCATAACTAGCTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 90 bp | CCATCTCCAGAACAACGTAGGCTCACAGAGTTCATAGCTGGTGGCTaGCAGTCTACACACACTGTGTATCCCTCACGGAGATACTGCATC | + |
|
Preference number: 5 (lower is better) Translates to: PSPEQRRLTEFIAGG*QSTHTVYPSRRYCI Trigger: GATGCAGTATCTCCGTGAGGGATACACAGTGTGTGTAGACTGTCAGCCACCAGCTATGAACTCTGTGAGCCTACGTTGTTCTGGAGATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CAA 90 bp | ATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTGGTGAGACGGCAGGCTaGGTCACAGAAGCATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: ILSGDICYPFKLLVGHSSGETAG*VTEACS Trigger: GGAACATGCTTCTGTGACCAAGCCTGCCGTCTCACC...ACTACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CAA 90 bp | CACACCATGCCACTTAGCCACAAACTCAGTTATCTCCCAACCAAGGGTAAAGCTAGGATTGCCAATGGCTaGCCAGCGAAGAGTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: HTMPLSHKLSYLPTKGKARIANG*PAKSLI Trigger: AATCAGACTCTTCGCTGGCAAGCCATTGGCAATCCT...AGCTTTACCCTTGGTTGGGAGATAACTGAGTTTGTGGCTAAGTGGCATGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CAA 90 bp | AAATACTATCAGGAGACATTTGCTACCCCTTTAAGCTTCTTGTTGGCCACAGTAGTCAGGGACTCTGTCTaGAACTCCATACAGTATCCA | + |
|
Preference number: 5 (lower is better) Translates to: KYYQETFATPLSFLLATVVRDSV*NSIQYP Trigger: TGGATACTGTATGGAGTTCAAGACAGAGTCCCTGAC...TACTGTGGCCAACAAGAAGCTTAAAGGGGTAGCAAATGTCTCCTGATAGTATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS-3UTR CAA 90 bp | CCTGATCTACAGAACAAGTTCCAGGATGGCAAAGGCTACACAAAGAAACTCTGTCTGTGGAGATACTGCTaGTATTATTCTCTTCTTGTT | + |
|
Preference number: 5 (lower is better) Translates to: PDLQNKFQDGKGYTKKLCLWRYC*YYSLLV Trigger: AACAAGAAGAGAATAATACAAGCAGTATCTCCACAG...ACAGAGTTTCTTTGTGTAGCCTTTGCCATCCTGGAACTTGTTCTGTAGATCAGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 90 bp | ACAGTATCCAGCATCCTTAGTGTGTGTAGACCACTGTGGAGATACTaGTTGTATTATTCTCTTCTTGTTGAAGACAGAGCTAGTTATGAA | + |
|
Preference number: 5 (lower is better) Translates to: TVSSILSVCRPLWRY*LYYSLLVEDRASYE Trigger: TTCATAACTAGCTCTGTCTTCAACAAGAAGAGAATAATACAAGCAGTATCTCCACAGTGGTCTACACACACTAAGGATGCTGGATACTGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 72 bp | GACCCTGTCCAGCCTCCAGCCGCGGGCGAAGCAGGCTaGGTCCCGGCCAGGACAGCAGCGGCCGGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: DPVQPPAAGEAG*VPARTAAAGLC Trigger: GCAGAGGCCGGCCGCTGCTGTCCTGGCCGGGACCCAGCCTGCTTCGCCCGCGGCTGGAGGCTGGACAGGGTC 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 72 bp | AGGGGTGGGCAGGGCGCCCCTCCGTTTAGTGGTTCCTaGCGCACTGAACGCCTGCGCACACGCGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: RGGQGAPPFSGS*RTERLRTRVVG Trigger: GCCCACCACGCGTGTGCGCAGGCGTTCAGTGCGTCAGGAACCACTAAACGGAGGGGCGCCCTGCCCACCCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 72 bp | GTTCCTGACGCACTGAACGCCTGCGCACACGCGTGGTaGGCTGGCACTGACCTGCGCAGCCACTCCAGGGAC | + |
|
Preference number: 6 (lower is better) Translates to: VPDALNACAHAW*AGTDLRSHSRD Trigger: GTCCCTGGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCACGCGTGTGCGCAGGCGTTCAGTGCGTCAGGAAC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 72 bp | ACGCCTGCGCACACGCGTGGTGGGCTGGCACTGACCTaGGCAGCCACTCCAGGGACTCCATTCTCCCACAAA | + |
|
Preference number: 6 (lower is better) Translates to: TPAHTRGGLALT*AATPGTPFSHK Trigger: TTTGTGGGAGAATGGAGTCCCTGGAGTGGCTGCGCAGGTCAGTGCCAGCCCACCACGCGTGTGCGCAGGCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 72 bp | CCAGGGACTCCATTCTCCCACAAAGCAAGGGCGAGCTaGGCACGCCCTGTCGTAGTCGAAGCAGCAGTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PGTPFSHKARAS*ARPVVVEAAVP Trigger: GGGGACTGCTGCTTCGACTACGACAGGGCGTGCCCAGCTCGCCCTTGCTTTGTGGGAGAATGGAGTCCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CAA 90 bp | CGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTGAGACGGCAGGCTaGGTCACAGAAGCATGTTCCATAGACCCTGTCCAGCCTCCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RPVVVEAAVPGETAG*VTEACSIDPVQPPA Trigger: GGCTGGAGGCTGGACAGGGTCTATGGAACATGCTTCTGTGACCAAGCCTGCCGTCTCACCGGGGACTGCTGCTTCGACTACGACAGGGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 72 bp | GGCACGCCCTGTCGTAGTCGAAGCAGCAGTCCCCGGTaGGACGGCAGGCTTGGTCACAGAAGCATGTTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: GTPCRSRSSSPR*DGRLGHRSMFH Trigger: ATGGAACATGCTTCTGTGACCAAGCCTGCCGTCTCACCGGGGACTGCTGCTTCGACTACGACAGGGCGTGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CAA 72 bp | GTAGTCGAAGCAGCAGTCCCCGGTGAGACGGCAGGCTaGGTCACAGAAGCATGTTCCATAGACCCTGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: VVEAAVPGETAG*VTEACSIDPVQ Trigger: CTGGACAGGGTCTATGGAACATGCTTCTGTGACCAAGCCTGCCGTCTCACCGGGGACTGCTGCTTCGACTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 72 bp | GTTATGAAGGCAGGAACAAAGGAGTGCCCGCAGTCCTaGCTCTGTGATGACGAGTACTCCAGGCAGCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: VMKAGTKECPQS*LCDDEYSRQPA Trigger: AGCTGGCTGCCTGGAGTACTCGTCATCACAGAGCCAGGACTGCGGGCACTCCTTTGTTCCTGCCTTCATAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 72 bp | AAGACAGAGCTAGTTATGAAGGCAGGAACAAAGGAGTaGCCGCAGTCCTGGCTCTGTGATGACGAGTACTCC | + |
|
Preference number: 6 (lower is better) Translates to: KTELVMKAGTKE*PQSWLCDDEYS Trigger: GGAGTACTCGTCATCACAGAGCCAGGACTGCGGGCACTCCTTTGTTCCTGCCTTCATAACTAGCTCTGTCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 72 bp | CAGTCTACACACACTGTGTATCCCTCACGGAGATACTaGATCCATCGAGTCAGGGGACTGTTGACCAGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: QSTHTVYPSRRY*IHRVRGLLTRA Trigger: TGCTCTGGTCAACAGTCCCCTGACTCGATGGATGCAGTATCTCCGTGAGGGATACACAGTGTGTGTAGACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 72 bp | GAACAACGTAGGCTCACAGAGTTCATAGCTGGTGGCTaGCAGTCTACACACACTGTGTATCCCTCACGGAGA | + |
|
Preference number: 6 (lower is better) Translates to: EQRRLTEFIAGG*QSTHTVYPSRR Trigger: TCTCCGTGAGGGATACACAGTGTGTGTAGACTGTCAGCCACCAGCTATGAACTCTGTGAGCCTACGTTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CAA 72 bp | TTTCCAGGTTCCCTGACATCGAGGATTGCCAATGGCTaGCCAGCGAAGAGTCTGATTTCCATCAGAGTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FPGSLTSRIANG*PAKSLISIRVQ Trigger: CTGGACTCTGATGGAAATCAGACTCTTCGCTGGCAAGCCATTGGCAATCCTCGATGTCAGGGAACCTGGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS TCA 72 bp | CATCGAGGATTGCCAATGGCTTGCCAGCGAAGAGTCTaGTTTCCATCAGAGTCCAGACCATCTCCAGAACAA | + |
|
Preference number: 6 (lower is better) Translates to: HRGLPMACQRRV*FPSESRPSPEQ Trigger: TTGTTCTGGAGATGGTCTGGACTCTGATGGAAATCAGACTCTTCGCTGGCAAGCCATTGGCAATCCTCGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CAA 90 bp | GTGTGTGTAGACCACTGTGGAGATACTGCTTGTATTATTCTCTTCTaGTTGAAGACAGAGCTAGTTATGAAGGCAGGAACAAAGGAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: VCVDHCGDTACIILF*LKTELVMKAGTKEC Trigger: GCACTCCTTTGTTCCTGCCTTCATAACTAGCTCTGTCTTCAACAAGAAGAGAATAATACAAGCAGTATCTCCACAGTGGTCTACACACAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS GCA 72 bp | AGCATCCTTAGTGTGTGTAGACCACTGTGGAGATACTaGTTGTATTATTCTCTTCTTGTTGAAGACAGAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SILSVCRPLWRY*LYYSLLVEDRA Trigger: AGCTCTGTCTTCAACAAGAAGAGAATAATACAAGCAGTATCTCCACAGTGGTCTACACACACTAAGGATGCT 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CAA 72 bp | GACCACTGTGGAGATACTGCTTGTATTATTCTCTTCTaGTTGAAGACAGAGCTAGTTATGAAGGCAGGAACA | + |
|
Preference number: 6 (lower is better) Translates to: DHCGDTACIILF*LKTELVMKAGT Trigger: TGTTCCTGCCTTCATAACTAGCTCTGTCTTCAACAAGAAGAGAATAATACAAGCAGTATCTCCACAGTGGTC 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||
| CDS CCA 72 bp | ACAGTATCCAGCATCCTTAGTGTGTGTAGACCACTGTaGAGATACTGCTTGTATTATTCTCTTCTTGTTGAA | + |
|
Preference number: 6 (lower is better) Translates to: TVSSILSVCRPL*RYCLYYSLLVE Trigger: TTCAACAAGAAGAGAATAATACAAGCAGTATCTCCACAGTGGTCTACACACACTAAGGATGCTGGATACTGT 40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040695.5 |
||