Pregenerated sensors for SBSN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000046056Ensembl transcript IDs: ENSMUST00000080518.14, ENSMUST00000182227.8, ENSMUST00000182229.8, ENSMUST00000182721.8
Found 121 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 72 bp | GGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTaGGTCGGTTCAGCTGGTGTGACAACCGGAACATTC | + |
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Preference number: 3 (lower is better) Translates to: GTQEALPKPPLL*VGSAGVTTGTF Trigger: GAATGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| 3UTR CCA 72 bp | TCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTaGTGTGACAACCGGAACATTCTGTTGCCTGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: SPQAPAPLGRFS*CDNRNILLPGH Trigger: ATGCCCAGGCAACAGAATGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGGATCCTCATGGGCTaGCCGGGCAGGCAGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: KQPSQGHPGSSPQAPAPLGILMG*PGRQSP Trigger: GGGACTCTGCCTGCCCGGGCAGCCCATGAGGATCCC...CAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTT 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | TCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCGGGATCCTCATGGGCTaGCCGGGCAGGCAGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: SQGHPGSSPQAPAPLGRFGILMG*PGRQSP Trigger: GGGACTCTGCCTGCCCGGGCAGCCCATGAGGATCCC...GAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR TCA 90 bp | GGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTCCCTCTCTCCCACCCTaGCCAAAAGCATGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GTQEALPKPPLLWVGSAGPSLPP*PKAWWA Trigger: GGCCCACCATGCTTTTGGTCAGGGTGGGAGAGAGGG...ACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCGGGATCCTCATGGGCTaGCCGGGCAGGCAGAGTCCC | + |
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Preference number: 4 (lower is better) Translates to: EALPKPPLLWVGSAGVTTGILMG*PGRQSP Trigger: GGGACTCTGCCTGCCCGGGCAGCCCATGAGGATCCC...GGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | CTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCCCCTTGCACCAGTCTaGCTCCCTCTCTCCCACCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSRAPRKLSPSPRSSGSVPLAPV*LPLSHP Trigger: AGGGTGGGAGAGAGGGAGGCAGACTGGTGCAAGGGG...AACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | AAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGCCCTGTCCAGCGGCGTaGTTGACCCCATGGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KQPSQGHPGSSPQAPAPLPCPAA*LTPWAN Trigger: GTTTGCCCATGGGGTCAACCACGCCGCTGGACAGGG...CAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182229.8 |
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| CDS-3UTR TCA 90 bp | AAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCCCTTCCCGGCCTGGTTaGCCCCAGTTTGGACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: KLKAALSRAPRKLSPSPRPSRPG*PQFGPH Trigger: ATGGGGTCCAAACTGGGGTCAACCAGGCCGGGAAGG...GCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | ACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCGGGATCCTCATGGGCTaGCCGGGCAGGCAGAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TKLKAALSRAPRKLSPSPGILMG*PGRQSP Trigger: GGGACTCTGCCTGCCCGGGCAGCCCATGAGGATCCC...GGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR TCA 90 bp | GAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCGCCATATCCCTGCCCTaGCCAAAAGCATGGTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALPKPPLLWVGSAGVTTAISLP*PKAWWA Trigger: GGCCCACCATGCTTTTGGTCAGGGCAGGGATATGGC...GGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | GAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCGCATGGCTAAGTCCCTaGCCAGCCCCTTGCACCAGT | + |
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Preference number: 4 (lower is better) Translates to: EALPKPPLLWVGSAGVTTAWLSP*PAPCTS Trigger: ACTGGTGCAAGGGGCTGGTCAGGGACTTAGCCATGC...GGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | GCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGCCTTTTGACCCTGGTTaGACCCAGTTTGGACCCCTT | + |
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Preference number: 4 (lower is better) Translates to: AALSRAPRKLSPSPRSSGPFDPG*TQFGPL Trigger: AAGGGGTCCAAACTGGGTTCAACCAGGGTCAAAAGG...CCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTCATGTTCCACGTTCTTaGCAGCCTGGCTGCCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: GTQEALPKPPLLWVGSAGHVPRS*QPGCPC Trigger: ACATGGGCAGCCAGGCTGGCAAGAACGTGGAACATG...ACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCATGTTCCACGTTCTTaGCAGCCTGGCTGCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGHVPRS*QPGCPC Trigger: ACATGGGCAGCCAGGCTGGCAAGAACGTGGAACATG...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | GCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGCTCTGCTTCCTTTCCTaGGTGTCCGATGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: AALSRAPRKLSPSPRSSGLCFLS*VSDATV Trigger: AACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAG...CCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | GGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTCTGCTGTGCCTCCTTTaGAGCATGGCTAAGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTQEALPKPPLLWVGSAGLLCLL*SMAKSL Trigger: CAGGGACTTAGCCATGCTGCAAAGGAGGCACAGCAG...ACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCACACCCTGGCCAAACTaGTCCATCTCCTCCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: EALPKPPLLWVGSAGVTTTPWPN*SISSPA Trigger: GGCTGGGGAGGAGATGGAGCAGTTTGGCCAGGGTGT...GGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | GCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCGACCCATTCAGCAGCTaGTTGGCCTCCTTGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: AQSSPLKGTQEALPKPPLDPFSS*LASLLG Trigger: ACCCAGCAAGGAGGCCAACCAGCTGCTGAATGGGTC...GAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | AAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGCATGGTGGGACCCCTaGCCAAACTTCCCTGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: KAALSRAPRKLSPSPRSSAWWDP*PNFPAS Trigger: TGAAGCAGGGAAGTTTGGTCAGGGGTCCCACCATGC...AGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | GCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGCCTTTTGAGCCTGGTTaGCTCCATTCTGTACCCCAT | + |
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Preference number: 4 (lower is better) Translates to: ALSRAPRKLSPSPRSSGSPFEPG*LHSVPH Trigger: ATGGGGTACAGAATGGAGTCAACCAGGCTCAAAAGG...CGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | CTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTGCCACATTCCCTCCATaGCCTAACTTGTCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: LSRAPRKLSPSPRSSGSVATFPP*PNLSAT Trigger: TGTGGCAGACAAGTTAGGTCATGGAGGGAATGTGGC...AACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCTGCCTTCAAGGGCCTTaGCCACCTCTCTCTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: EALPKPPLLWVGSAGVTTCLQGP*PPLSQH Trigger: ATGCTGAGAGAGAGGTGGGCAAGGCCCTTGAAGGCA...GGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | AAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGCTCTGCTTCCTTTCCTaGGTGTCCGATGCCACTGTT | + |
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Preference number: 4 (lower is better) Translates to: KQPSQGHPGSSPQAPAPLLCFLS*VSDATV Trigger: AACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAG...CAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTATGGGCAAACTTCTCTaGTTCCTTTCCTGCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGMGKLL*FLSCVS Trigger: GGACACGCAGGAAAGGAAGCAGAGAAGTTTGCCCAT...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CCA 90 bp | CACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCACCTGTCCAGCGGCGTaGTTGACCCCATGGGCAAAC | + |
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Preference number: 4 (lower is better) Translates to: HKAQSSPLKGTQEALPKPTCPAA*LTPWAN Trigger: GTTTGCCCATGGGGTCAACCACGCCGCTGGACAGGT...GGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080518.14 ENSMUST00000182721.8 |
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| CDS-3UTR CCA 90 bp | CACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTCCAGTTTGGACCCCATaGGCCACTTTTTCTGCTTCC | + |
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Preference number: 4 (lower is better) Translates to: HPGSSPQAPAPLGRFSWCPVWTP*ATFSAS Trigger: GGAAGCAGAAAAAGTGGCCCATGGGGTCCAAACTGG...ACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | CACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCGCCACATTCCCACCCTaGCCAAAAGCATGGTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: HKAQSSPLKGTQEALPKPATFPP*PKAWWD Trigger: GTCCCACCATGCTTTTGGTCAGGGTGGGAATGTGGC...GGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | CTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTGCATGGTGGGTTTCATaGCCTAACTTGTCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSRAPRKLSPSPRSSGSVAWWVS*PNLSAT Trigger: TGTGGCAGACAAGTTAGGTCATGAAACCCACCATGC...AACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | CAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCGCATGGTGGGTTTCATaGCCTAACTTCTCTGCCACA | + |
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Preference number: 4 (lower is better) Translates to: QSSPLKGTQEALPKPPLLAWWVS*PNFSAT Trigger: TGTGGCAGAGAAGTTAGGTCATGAAACCCACCATGC...GAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTGACCAAACTTGTCTaGCATATTTCCGCCCTGACC | + |
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Preference number: 4 (lower is better) Translates to: AQSSPLKGTQEALPKPPLLTKLV*HISALT Trigger: GGTCAGGGCGGAAATATGGCAGACAAGTTTGGTCAG...GAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | GCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCTCTCTGCCATATCCCTaGCCTGACCAAAAGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: AQSSPLKGTQEALPKPPLSLPYP*PDQKHG Trigger: ACCATGCTTTTGGTCAGGGCAGGGATATGGCAGAGA...GAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | CTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTAACCTGTTCATTTCCTaGCCAGCAGCATGGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: LSRAPRKLSPSPRSSGSVNLFIS*PAAWWT Trigger: TGTCCACCATGCTGCTGGCCAGGAAATGAACAGGTT...AACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | GCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGACTCCTCCACAGAGCTaGGAAGTTGATAAATGGCTT | + |
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Preference number: 4 (lower is better) Translates to: AALSRAPRKLSPSPRSSGTPPQS*EVDKWL Trigger: AAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGT...CCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR TCA 90 bp | ACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCGCCACATTCCCACCCTaGCCAAAAGCATGGTGGGTT | + |
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Preference number: 4 (lower is better) Translates to: TKLKAALSRAPRKLSPSPATFPP*PKAWWV Trigger: AACCCACCATGCTTTTGGTCAGGGTGGGAATGTGGC...GGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | AGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTATGGGCAAACTTCTCTaGTTCCTTTCCTGCGTGTCC | + |
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Preference number: 4 (lower is better) Translates to: SSKQPSQGHPGSSPQAPAMGKLL*FLSCVS Trigger: GGACACGCAGGAAAGGAAGCAGAGAAGTTTGCCCAT...AGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CCA 90 bp | CTCTGGGTCGGTTCAGCTGGTGTGACAACCGGAACATTCTGTTGCCTGGGCATCATCTCCTCCCCAGCCTaGCTGACCCCGGGACGAATT | + |
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Preference number: 4 (lower is better) Translates to: LWVGSAGVTTGTFCCLGIISSPA*LTPGRI Trigger: AATTCGTCCCGGGGTCAGCCAGGCTGGGGAGGAGAT...GATGCCCAGGCAACAGAATGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | CAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCTGGTTGAACCCAGTTTaGACCCCTTGGCCAACTCTC | + |
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Preference number: 4 (lower is better) Translates to: QSSKQPSQGHPGSSPQAPWLNPV*TPWPTL Trigger: GAGAGTTGGCCAAGGGGTCCAAACTGGGTTCAACCA...GGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CCA 90 bp | AAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTTGGGAAGTTGATAAATaGCTTGTTGACCGAGGCCCC | + |
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Preference number: 4 (lower is better) Translates to: KAALSRAPRKLSPSPRSSWEVDK*LVDRGP Trigger: GGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCA...AGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR TCA 90 bp | TCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCTTTTCTGCTTCCTTTTaGGCCTGGTTGACTCCATTC | + |
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Preference number: 4 (lower is better) Translates to: SQGHPGSSPQAPAPLGRFFSASF*AWLTPF Trigger: GAATGGAGTCAACCAGGCTCAAAAGGAAGCAGAAAA...GAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | AAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGTTTTCTGCTTCCTTTTaGCCCTGGTTGAACCCAGTT | + |
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Preference number: 4 (lower is better) Translates to: KQPSQGHPGSSPQAPAPLFSASF*PWLNPV Trigger: AACTGGGTTCAACCAGGGTCAAAAGGAAGCAGAAAA...CAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR TCA 90 bp | CTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCGGAACACCTTGCTGGGTTGGTTaGCCCCATTATGAACATCTT | + |
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Preference number: 4 (lower is better) Translates to: LPKPPLLWVGSAGVTTGTPCWVG*PHYEHL Trigger: AAGATGTTCATAATGGGGTCAACCAACCCAGCAAGG...TGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR GCA 90 bp | TCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCATGTTCCACGTTCTTaGCAGCCTGGCTGCCCATGT | + |
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Preference number: 4 (lower is better) Translates to: SQSSKQPSQGHPGSSPQAHVPRS*QPGCPC Trigger: ACATGGGCAGCCAGGCTGGCAAGAACGTGGAACATG...GGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | CACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCACTTTGTCTCCTTCTTaGCAAGTCTGCCCCGCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: HKAQSSPLKGTQEALPKPTLSPS*QVCPAA Trigger: TGCTGCGGGGCAGACTTGGCAAGAAGGAGACAAAGT...GGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR GCA 90 bp | CTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTATGGGCCACTTTTTCTaGTTCCTTTTGAGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSRAPRKLSPSPRSSGSVMGHFF*FLLSLV Trigger: AACCAGGCTCAAAAGGAAGCAGAAAAAGTGGCCCAT...AACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CCA 90 bp | CCTCTGGGTCGGTTCAGCTGGTGTGACAACCGGAACATTCTGTTGCCTGGGCATGTCTCCTTCCCGGCCTaGTTGACCCCAGTTTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: PLGRFSWCDNRNILLPGHVSFPA*LTPVWT Trigger: TGTCCAAACTGGGGTCAACCAGGCCGGGAAGGAGAC...ATGCCCAGGCAACAGAATGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CCA 90 bp | CAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCTGGGAAGTTGATAAATaGCTTGTTGACCGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSSKQPSQGHPGSSPQAPWEVDK*LVDRGP Trigger: GGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCA...GGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCACTCCTCCACAGAGCTaGGAAGTTGATAAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSPLKGTQEALPKPPLLTPPQS*EVDKWL Trigger: AAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGT...GAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCATGGGCCACTTTTTCTaGTTCCTTTTCAGCCTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSSPLKGTQEALPKPPLLMGHFF*FLFSLF Trigger: AAACAGGCTGAAAAGGAAGCAGAAAAAGTGGCCCAT...GAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR GCA 90 bp | AAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTATGGGCCACTTTTTCTaGTTCCTTTTGACCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAALSRAPRKLSPSPRSSMGHFF*FLLTLV Trigger: AACCAGGGTCAAAAGGAAGCAGAAAAAGTGGCCCAT...AGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR GCA 90 bp | TCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCTGATCAAATGTCTCTaGCATATCCCTGCCCTGACC | + |
|
Preference number: 4 (lower is better) Translates to: SQSSKQPSQGHPGSSPQALIKCL*HIPALT Trigger: GGTCAGGGCAGGGATATGGCAGAGACATTTGATCAG...GGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CCA 90 bp | AGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCACCTGTCCAGCGGCGTaGTTGACCCCATGGGCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SLFTKLKAALSRAPRKLSTCPAA*LTPWAN Trigger: GTTTGCCCATGGGGTCAACCACGCCGCTGGACAGGT...GGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080518.14 ENSMUST00000182721.8 |
||
| CDS-3UTR CCA 90 bp | CTCTGGGTCGGTTCAGCTGGTGTGACAACCGGAACATTCTGTTGCCTGGGCATCTGGGAAGTTGATAAATaGCTTGTTGACCGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LWVGSAGVTTGTFCCLGIWEVDK*LVDRGP Trigger: GGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCA...GATGCCCAGGCAACAGAATGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR TCA 90 bp | AGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGCCTTCCCGGCCTGGTTaGCCCCAGTTTGGACACCGT | + |
|
Preference number: 4 (lower is better) Translates to: SMFKFIHKAQSSPLKGTQPSRPG*PQFGHR Trigger: ACGGTGTCCAAACTGGGGTCAACCAGGCCGGGAAGG...CTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CCA 90 bp | GTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGGTCTCCTTCCCGGCCTaGTTGACCCCAGTTTGGACC | + |
|
Preference number: 4 (lower is better) Translates to: VCSSLFTKLKAALSRAPRVSFPA*LTPVWT Trigger: GGTCCAAACTGGGGTCAACCAGGCCGGGAAGGAGAC...CCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR TCA 90 bp | AAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCTGGCTGACCCCATaGTGGATGATTTTGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KFIHKAQSSPLKGTQEALPWLTP*WMILFV Trigger: GACAAACAAAATCATCCATCATGGGGTCAGCCAGGG...GAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR GCA 90 bp | TCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCATGGGCAAACTTCTCTaGTTCCTTTCCTGCGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSLFTKLKAALSRAPRKLMGKLL*FLSCVS Trigger: GGACACGCAGGAAAGGAAGCAGAGAAGTTTGCCCAT...GAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCTGGGAAGTTGATAAATaGCTTGTTGACCGAGGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: KFIHKAQSSPLKGTQEALWEVDK*LVDRGP Trigger: GGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCA...GAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR GCA 90 bp | AGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGCTCTGCTTCCTTTCCTaGGTGTCCGATGCCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SMFKFIHKAQSSPLKGTQLCFLS*VSDATV Trigger: AACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAG...CTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CCA 90 bp | TCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCACTCCTCCACAGAGCTaGGAAGTTGATAAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: SSLFTKLKAALSRAPRKLTPPQS*EVDKWL Trigger: AAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGT...GAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CCA 90 bp | AAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCACTCCTCCACAGAGCTaGGAAGTTGATAAATGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: KFIHKAQSSPLKGTQEALTPPQS*EVDKWL Trigger: AAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGT...GAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR GCA 90 bp | AGAGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCGTGGGCCACTTTTTCTaGTTCCTTTTGAGCCTGGTT | + |
|
Preference number: 4 (lower is better) Translates to: RVCSSLFTKLKAALSRAPVGHFF*FLLSLV Trigger: AACCAGGCTCAAAAGGAAGCAGAAAAAGTGGCCCAC...GGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | CAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTCCCTGACCAGCCCCTaGCACCAGTCTGCCTCCCTC | + |
|
Preference number: 5 (lower is better) Translates to: QGHPGSSPQAPAPLGRFSSLTSP*HQSASL Trigger: GAGGGAGGCAGACTGGTGCAAGGGGCTGGTCAGGGA...GCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCCATGTTCCACGTTCTaGCCAGCCTGGCTGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGPCSTF*PAWLPM Trigger: CATGGGCAGCCAGGCTGGCAAGAACGTGGAACATGG...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | CAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCCCATGTTCCACGTTCTaGCCAGCCTGGCTGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: QGHPGSSPQAPAPLGRFSPCSTF*PAWLPM Trigger: CATGGGCAGCCAGGCTGGCAAGAACGTGGAACATGG...GCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | AAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTCCATGTTCCACGTTCTaGCCAGCCTGGCTGCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: KAALSRAPRKLSPSPRSSPCSTF*PAWLPM Trigger: CATGGGCAGCCAGGCTGGCAAGAACGTGGAACATGG...AGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | CAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCTCCTTCCCGGCCTGGTaGACCCCAGTTTGGACACCG | + |
|
Preference number: 5 (lower is better) Translates to: QSSKQPSQGHPGSSPQAPSFPAW*TPVWTP Trigger: CGGTGTCCAAACTGGGGTCAACCAGGCCGGGAAGGA...GGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTGGCCTCCTTGCTGGGTaGGTTGACCCCATTATGAAC | + |
|
Preference number: 5 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGGLLAG*VDPIMN Trigger: GTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCC...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | AAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCATGCCTTCAAGGGCCTaGCCCACCTCTCTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLKAALSRAPRKLSPSPRMPSRA*PTSLSA Trigger: TGCTGAGAGAGAGGTGGGCAAGGCCCTTGAAGGCAT...GCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | ACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCTCCTTCCCGGCCTGGTaGACCCCAGTTTGGACCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TKLKAALSRAPRKLSPSPSFPAW*TPVWTP Trigger: TGGGGTCCAAACTGGGGTCAACCAGGCCGGGAAGGA...GGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | AAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCGTACCCGCCTTGACCTaGATGAGACCCCTCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLKAALSRAPRKLSPSPRVPALT*MRPLSL Trigger: GAGAGAGAGGGGTCTCATCAAGGTCAAGGCGGGTAC...GCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182227.8 |
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| CDS-3UTR CAA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTGCCTGGCTGCCCATGTaGCTGAGTTCACCAAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGAWLPM*LSSPKI Trigger: AATTTTTGGTGAACTCAGCAACATGGGCAGCCAGGC...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | GCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGAAGTTGATAAATGGCTaGTTGACCGAGGCCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: AALSRAPRKLSPSPRSSGKLING*LTEAPD Trigger: ATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTT...CCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | CACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCATGCCTTCAAGGGCCTaGCCCACCTCTCTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HKAQSSPLKGTQEALPKPMPSRA*PTSLSA Trigger: TGCTGAGAGAGAGGTGGGCAAGGCCCTTGAAGGCAT...GGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | CAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCTACTTTGTCTCCTTCTaGCCAAGTCTGCCCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSSKQPSQGHPGSSPQAPYFVSF*PSLPRS Trigger: GCTGCGGGGCAGACTTGGCAAGAAGGAGACAAAGTA...GGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CAA 90 bp | GGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTCACAGAGCTGGGAAGTaGATAAATGGCTTGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: GTQEALPKPPLLWVGSAGHRAGK*INGLLT Trigger: GGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTG...ACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | CAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTCACAGAGCTGGGAAGTaGATAAATGGCTTGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QPSQGHPGSSPQAPAPLGHRAGK*INGLLT Trigger: GGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTG...ACCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | CTCCCCAAGCCCCCGCTCCTCTGGGTCGGTTCAGCTGGTGTGACAACCGGAACAGCCTGGCTGCCCATGTaGCTGAGTTCACCAAAAATT | + |
|
Preference number: 5 (lower is better) Translates to: LPKPPLLWVGSAGVTTGTAWLPM*LSSPKI Trigger: AATTTTTGGTGAACTCAGCAACATGGGCAGCCAGGC...TGTTCCGGTTGTCACACCAGCTGAACCGACCCAGAGGAGCGGGGGCTTGGGGAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCTGGGTTTTTCTGCTTCCTTTaGAGCCTGGTTGACTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AALSRAPRKLSPSPRSSGFFCFL*SLVDSI Trigger: AATGGAGTCAACCAGGCTCAAAAGGAAGCAGAAAAA...CCCAGAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CAA 90 bp | CAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTCCTCCACAGAGCTGGGAAGTaGATAAATGGCTTGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: QSSPLKGTQEALPKPPLLHRAGK*INGLLT Trigger: GGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTG...GAGGAGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | TCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCGTACCCGCCTTGACCTaGATGAGACCCATTCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SQSSKQPSQGHPGSSPQAVPALT*MRPIQQ Trigger: CTGCTGAATGGGTCTCATCAAGGTCAAGGCGGGTAC...GGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CAA 90 bp | AGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCCGCTAAGTTGATAAATGGCTaGTTGACCGAGGCCCCAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SSKQPSQGHPGSSPQAPAKLING*LTEAPD Trigger: ATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTT...AGCGGGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS GCA 90 bp | ATAATAACCATGCCCGTGACCATGACCAAACTGCTGTGCCTCCTTTaGAGCATGGCTAAGTCCCTGACCAGCCCCTTGCACCAGTCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: IITMPVTMTKLLCLL*SMAKSLTSPLHQSA Trigger: GGCAGACTGGTGCAAGGGGCTGGTCAGGGACTTAGCCATGCTGCAAAGGAGGCACAGCAGTTTGGTCATGGTCACGGGCATGGTTATTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
||
| CDS-3UTR CAA 90 bp | GTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCATGCCTTCAAGGGCCTaGCCCACCTCTCTCTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: VYSQSSKQPSQGHPGSSPMPSRA*PTSLSA Trigger: TGCTGAGAGAGAGGTGGGCAAGGCCCTTGAAGGCAT...GGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS CCA 90 bp | TTCTCTGCTTCCTTTCCTGCGTGTCCGATGCCACTGTTGATGTCGTaGGCTACTTTGTCCAAGCCATGTTCCACGTTCTTGCCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FSASFPACPMPLLMS*ATLSKPCSTFLPAW Trigger: CCAGGCTGGCAAGAACGTGGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
||
| CDS-3UTR CAA 90 bp | GTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCTGGTTGAACCCAGTTaGGACCCCTTGGCCAACTCT | + |
|
Preference number: 5 (lower is better) Translates to: VYSQSSKQPSQGHPGSSPLVEPS*DPLANS Trigger: AGAGTTGGCCAAGGGGTCCAAACTGGGTTCAACCAG...GGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | ACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCCCAAGCCCCTTTTTCTGCTTCCTTTaGACCCTGGTTGAACCCAGT | + |
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Preference number: 5 (lower is better) Translates to: TKLKAALSRAPRKLSPSPFFCFL*TLVEPS Trigger: ACTGGGTTCAACCAGGGTCAAAAGGAAGCAGAAAAA...GGGGCTTGGGGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS TCA 90 bp | GGGCAAACTTCTCTGCTTCCTTTCCTGCGTGTCCGATGCCACTGTTaGTGTCGTGGGCTACTTTGTCCAAGCCATGTTCCACGTTCTTGC | + |
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Preference number: 5 (lower is better) Translates to: GQTSLLPFLRVRCHC*CRGLLCPSHVPRSC Trigger: GCAAGAACGTGGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAGAAGTTTGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS TCA 90 bp | GATGAGACCCATTCAGCAGCTGGTTGGCCTCCTTGCTGGGTTGGTTaGCCCCATTATGAACATCTTGCTGCAACCTGTTCATTTCCTGGC | + |
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Preference number: 5 (lower is better) Translates to: DETHSAAGWPPCWVG*PHYEHLAATCSFPG Trigger: GCCAGGAAATGAACAGGTTGCAGCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCAGCTGCTGAATGGGTCTCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | AGAGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCCCCAGTTTGGACCCCTaGGCCAACTCTCTGTGTCTC | + |
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Preference number: 5 (lower is better) Translates to: RVCSSLFTKLKAALSRAPPSLDP*ANSLCL Trigger: GAGACACAGAGAGTTGGCCAAGGGGTCCAAACTGGG...GGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACTCT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS-3UTR CAA 90 bp | AGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGGAAGCTCTCCAAGTTGATAAATGGCTaGTTGACCGAGGCCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SLFTKLKAALSRAPRKLSKLING*LTEAPD Trigger: ATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTT...GGAGAGCTTCCTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | AGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGAAGTTGATAAATGGCTaGTTGACCGAGGCCCCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SMFKFIHKAQSSPLKGTQKLING*LTEAPD Trigger: ATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTT...CTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS-3UTR CAA 90 bp | AGTATGTTCAAGTTTATTCACAAAGCTCAAAGCAGCCCTCTCAAGGGCACCCAGCACAGAGCTGGGAAGTaGATAAATGGCTTGTTGACC | + |
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Preference number: 5 (lower is better) Translates to: SMFKFIHKAQSSPLKGTQHRAGK*INGLLT Trigger: GGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTG...CTGGGTGCCCTTGAGAGGGCTGCTTTGAGCTTTGTGAATAAACTTGAACATACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 72 bp | GGCCCCTCCGTGCTGGCCTCCGTACCCGCCTTGACCTaGATGAGACCCCTGTCCAGCGGCGTGGTTGACCCC | + |
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Preference number: 6 (lower is better) Translates to: GPSVLASVPALT*MRPLSSGVVDP Trigger: GGGGTCAACCACGCCGCTGGACAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182229.8 |
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| CDS CAA 72 bp | GGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTaGACCTTGATGAGACCCCTGTCCAGCGGCGTGGTT | + |
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Preference number: 6 (lower is better) Translates to: GCGPSVLASVPA*TLMRPLSSGVV Trigger: AACCACGCCGCTGGACAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182229.8 |
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| CDS CAA 72 bp | GGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTaGACCTTGATGAGACCCATTCAGCAGCTGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: GCGPSVLASVPA*TLMRPIQQLVG Trigger: GCCAACCAGCTGCTGAATGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 72 bp | GGCCCCTCCGTGCTGGCCTCCGTACCCGCCTTGACCTaGATGAGACCCCTCTCTCTCAGCATTGCTCAGCCC | + |
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Preference number: 6 (lower is better) Translates to: GPSVLASVPALT*MRPLSLSIAQP Trigger: GGGCTGAGCAATGCTGAGAGAGAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182227.8 |
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| CDS GCA 72 bp | CTTGTTGACCGAGGCCCCAGATACTACTGTAGTGGTTaGGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LVDRGPRYYCSG*GPSVLASVPAL Trigger: CAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACCACTACAGTAGTATCTGGGGCCTCGGTCAACAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 72 bp | GGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTaGACCTTGATGAGACCCCTCTCTCTCAGCATTGCT | + |
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Preference number: 6 (lower is better) Translates to: GCGPSVLASVPA*TLMRPLSLSIA Trigger: AGCAATGCTGAGAGAGAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182227.8 |
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| CDS CAA 90 bp | AGTGGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTTGACCTaGATGAGACCCATTCAGCAGCTGGTTGGCCTCCTTGCTGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: SGCGPSVLASVPALT*MRPIQQLVGLLAGL Trigger: CAACCCAGCAAGGAGGCCAACCAGCTGCTGAATGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 90 bp | AGTGGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTTGACCTaGATGAGACCCCTCTCTCTCAGCATTGCTCAGCCCTCGGCTGAA | + |
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Preference number: 6 (lower is better) Translates to: SGCGPSVLASVPALT*MRPLSLSIAQPSAE Trigger: TTCAGCCGAGGGCTGAGCAATGCTGAGAGAGAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACCACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182227.8 |
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| CDS CAA 90 bp | TACTGTAGTGGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTaGACCTTGATGAGACCCCTCTCTCTCAGCATTGCTCAGCCCTCG | + |
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Preference number: 6 (lower is better) Translates to: YCSGCGPSVLASVPA*TLMRPLSLSIAQPS Trigger: CGAGGGCTGAGCAATGCTGAGAGAGAGGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACCACTACAGTA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182227.8 |
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| CDS CAA 90 bp | TACTGTAGTGGTTGCGGCCCCTCCGTGCTGGCCTCCGTACCCGCCTaGACCTTGATGAGACCCATTCAGCAGCTGGTTGGCCTCCTTGCT | + |
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Preference number: 6 (lower is better) Translates to: YCSGCGPSVLASVPA*TLMRPIQQLVGLLA Trigger: AGCAAGGAGGCCAACCAGCTGCTGAATGGGTCTCATCAAGGTCAAGGCGGGTACGGAGGCCAGCACGGAGGGGCCGCAACCACTACAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 90 bp | GCGGCGATACTCCTCCACAGAGCTGGGAAGTTGATAAATGGCTTGTaGACCGAGGCCCCAGATACTACTGTAGTGGTTGCGGCCCCTCCG | + |
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Preference number: 6 (lower is better) Translates to: AAILLHRAGKLINGL*TEAPDTTVVVAAPP Trigger: CGGAGGGGCCGCAACCACTACAGTAGTATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGTATCGCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS GCA 72 bp | ATGCCCGTGACCATGACCAAACTGCTGTGCCTCCTTTaGAGCATGGCTAAGTCCCTGACCAGCCCCTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: MPVTMTKLLCLL*SMAKSLTSPLH Trigger: GTGCAAGGGGCTGGTCAGGGACTTAGCCATGCTGCAAAGGAGGCACAGCAGTTTGGTCATGGTCACGGGCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 72 bp | CCTTGGCCAACTCTCTGTGTCTCCTTCCCGGCCTGGTaGACCCCAGTTTGGACACCGTGGGCCACTTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PWPTLCVSFPAW*TPVWTPWATFS Trigger: AGAAAAAGTGGCCCACGGTGTCCAAACTGGGGTCAACCAGGCCGGGAAGGAGACACAGAGAGTTGGCCAAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 90 bp | TCCTTTCCTGCGTGTCCGATGCCACTGTTGATGTCGTGGGCTACTTaGTCCAAGCCATGTTCCACGTTCTTGCCAGCCTGGCTGCCCATG | + |
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Preference number: 6 (lower is better) Translates to: SFPACPMPLLMSWAT*SKPCSTFLPAWLPM Trigger: CATGGGCAGCCAGGCTGGCAAGAACGTGGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 90 bp | GTGGCGGCGATACTCCTCCACAGAGCTGGGAAGTTGATAAATGGCTaGTTGACCGAGGCCCCAGATACTACTGTAGTGGTTGCGGCCCCT | + |
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Preference number: 6 (lower is better) Translates to: VAAILLHRAGKLING*LTEAPDTTVVVAAP Trigger: AGGGGCCGCAACCACTACAGTAGTATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGTATCGCCGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CCA 72 bp | TTAGGGCATGGTGGCGGCGATACTCCTCCACAGAGCTaGGAAGTTGATAAATGGCTTGTTGACCGAGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LGHGGGDTPPQS*EVDKWLVDRGP Trigger: GGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAGTATCGCCGCCACCATGCCCTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 90 bp | CCGTTATTGATGCCTTCAAGGGCCTTGCCCACCTCTCTCTCAGCATaGCTCAGCCCTCGGCTGAACCCTTCTATGACCTTCTCAACGGGA | + |
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Preference number: 6 (lower is better) Translates to: PLLMPSRALPTSLSA*LSPRLNPSMTFSTG Trigger: TCCCGTTGAGAAGGTCATAGAAGGGTTCAGCCGAGGGCTGAGCAATGCTGAGAGAGAGGTGGGCAAGGCCCTTGAAGGCATCAATAACGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CCA 72 bp | TCCTTTTCAGCCTGTTTAATAGTATGGCGGACACCCTaGCCAAACTGCTCCATCTCCTCCCCAGCCTGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SFSACLIVWRTP*PNCSISSPAWL Trigger: CAGCCAGGCTGGGGAGGAGATGGAGCAGTTTGGCCAGGGTGTCCGCCATACTATTAAACAGGCTGAAAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 72 bp | TCGTGGGCTACTTTGTCCAAGCCATGTTCCACGTTCTaGCCAGCCTGGCTGCCCATGTTGCTGAGTTCACCA | + |
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Preference number: 6 (lower is better) Translates to: SWATLSKPCSTF*PAWLPMLLSSP Trigger: TGGTGAACTCAGCAACATGGGCAGCCAGGCTGGCAAGAACGTGGAACATGGCTTGGACAAAGTAGCCCACGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 72 bp | CTGGCTGACCCCGGGACGAATTACTTTGTCTCCTTCTaGCCAAGTCTGCCCCGCAGCATAATAACCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: LADPGTNYFVSF*PSLPRSIITMP Trigger: GGGCATGGTTATTATGCTGCGGGGCAGACTTGGCAAGAAGGAGACAAAGTAATTCGTCCCGGGGTCAGCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 90 bp | CTGGTTGGCCTCCTTGCTGGGTTGGTTGACCCCATTATGAACATCTaGCTGCAACCTGTTCATTTCCTGGCCAGCAGCATGGTGGACACC | + |
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Preference number: 6 (lower is better) Translates to: LVGLLAGLVDPIMNI*LQPVHFLASSMVDT Trigger: GGTGTCCACCATGCTGCTGGCCAGGAAATGAACAGGTTGCAGCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS TCA 72 bp | TCTCTGCTTCCTTTCCTGCGTGTCCGATGCCACTGTTaGTGTCGTGGGCTACTTTGTCCAAGCCATGTTCCA | + |
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Preference number: 6 (lower is better) Translates to: SLLPFLRVRCHC*CRGLLCPSHVP Trigger: TGGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CCA 72 bp | TCCTTTCCTGCGTGTCCGATGCCACTGTTGATGTCGTaGGCTACTTTGTCCAAGCCATGTTCCACGTTCTTG | + |
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Preference number: 6 (lower is better) Translates to: SFPACPMPLLMS*ATLSKPCSTFL Trigger: CAAGAACGTGGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 72 bp | TTCTCTGCTTCCTTTCCTGCGTGTCCGATGCCACTGTaGATGTCGTGGGCTACTTTGTCCAAGCCATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: FSASFPACPMPL*MSWATLSKPCS Trigger: GGAACATGGCTTGGACAAAGTAGCCCACGACATCAACAGTGGCATCGGACACGCAGGAAAGGAAGCAGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080518.14 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS CAA 72 bp | CTCCTCCACAGAGCTGGGAAGTTGATAAATGGCTTGTaGACCGAGGCCCCAGATACTACTGTAGTGGTTGCG | + |
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Preference number: 6 (lower is better) Translates to: LLHRAGKLINGL*TEAPDTTVVVA Trigger: CGCAACCACTACAGTAGTATCTGGGGCCTCGGTCAACAAGCCATTTATCAACTTCCCAGCTCTGTGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000080518.14 ENSMUST00000182227.8 ENSMUST00000182229.8 ENSMUST00000182721.8 |
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| CDS TCA 72 bp | TGGTTGGCCTCCTTGCTGGGTTGGTTGACCCCATTATaGACATCTTGCTGCAACCTGTTCATTTCCTGGCCA | + |
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Preference number: 6 (lower is better) Translates to: WLASLLGWLTPL*TSCCNLFISWP Trigger: TGGCCAGGAAATGAACAGGTTGCAGCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS TCA 72 bp | CATTCAGCAGCTGGTTGGCCTCCTTGCTGGGTTGGTTaGCCCCATTATGAACATCTTGCTGCAACCTGTTCA | + |
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Preference number: 6 (lower is better) Translates to: HSAAGWPPCWVG*PHYEHLAATCS Trigger: TGAACAGGTTGCAGCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAGGCCAACCAGCTGCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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| CDS CAA 72 bp | CTCCTTGCTGGGTTGGTTGACCCCATTATGAACATCTaGCTGCAACCTGTTCATTTCCTGGCCAGCAGCATG | + |
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Preference number: 6 (lower is better) Translates to: LLAGLVDPIMNI*LQPVHFLASSM Trigger: CATGCTGCTGGCCAGGAAATGAACAGGTTGCAGCAAGATGTTCATAATGGGGTCAACCAACCCAGCAAGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080518.14 |
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