Pregenerated sensors for SBPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024125Ensembl transcript IDs: ENSMUST00000024939.2, ENSMUST00000235047.2
Found 51 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTaGGAGGAGGCGCTGCCATGTGGAGATGCAGGACTGAGCTCTGAG | + |
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Preference number: 1 (lower is better) Translates to: LESPGILLPPVGELG*EEALPCGDAGLSSE Trigger: CTCAGAGCTCAGTCCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGTGGGAGAGCTTGGCTaGGAGGAGGCGCTGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: IDAHSLLDRDKGIWALLPVGELG*EEALPC Trigger: ACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCAC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| 3UTR CCA 72 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTaGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTG | + |
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Preference number: 3 (lower is better) Translates to: PAWSLLVYYFLQ*ESLAERRRCHV Trigger: CACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| 3UTR TCA 72 bp | CCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTaGGAGGAGGCGCTGCCATGTGGAGATGCAGGACTG | + |
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Preference number: 3 (lower is better) Translates to: PGILLPPVGELG*EEALPCGDAGL Trigger: CAGTCCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| 3UTR CCA 72 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTaGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGG | + |
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Preference number: 3 (lower is better) Translates to: VSWYITSSSGRA*LRGGAAMWRCR Trigger: CCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| 3UTR CAA 72 bp | AGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTaGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAG | + |
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Preference number: 4 (lower is better) Translates to: SLLVYYFLQWES*AERRRCHVEMQ Trigger: CTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTCTGGGCTCTGCAGGTaGGACTGGCCAGGAGAGCCA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPSGLCR*DWPGEP Trigger: TGGCTCTCCTGGCCAGTCCCACCTGCAGAGCCCAGA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGGACATTCTGGGCTCTaGAGGTGGGACTGGCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPGHSGL*RWDWPG Trigger: TCCTGGCCAGTCCCACCTGCAGAGCCCAGAATGTCC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCTCTGCAGGTGGGACTaGCCAGGAGAGCCAAAGTCA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPLCRWD*PGEPKS Trigger: TGACTTTGGCTCTCCTGGCCAGTCCCACCTGCAGAG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTTCCCCAGGACATTCTaGGCTCTGCAGGTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPFPRTF*ALQVGL Trigger: CAGTCCCACCTGCAGAGCCCAGAATGTCCTGGGGAA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTCAGCAACAGCAGCATaGCTCCTGAGGGTTCAGGAC | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPSATAA*LLRVQD Trigger: GTCCTGAACCCTCAGGAGCCATGCTGCTGTTGCTGA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCTCTTTCACAGGCTCTaGGGACCCCAAGTCCTTTGC | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPLFHRL*GPQVLC Trigger: GCAAAGGACTTGGGGTCCCCAGAGCCTGTGAAAGAG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCAGAGGCCCGGTGCATaGATTCCATTGACAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPQRPGA*IPLTVT Trigger: AGTGACTGTCAATGGAATGCATGCACCGGGCCTCTG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGTCAGAGCTGTCCTTTaGCTCTTTCACAGGCTCTGG | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPVRAVL*LFHRLW Trigger: CCAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGAC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGAACGTAGAAATACTTaGCAGCAGCATTCCCCAGGA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPERRNT*QQHSPG Trigger: TCCTGGGGAATGCTGCTGGCAAGTATTTCTACGTTC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCAGTTATTGCCAAACTaGAGCTGGAAGCCCTTGATG | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPQLLPN*SWKPLM Trigger: CATCAAGGGCTTCCAGCTGCAGTTTGGCAATAACTG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCAGTCAGGCAGATCACTaGACTGCCCTCTACCTTTAT | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPSQADH*TALYLY Trigger: ATAAAGGTAGAGGGCAGTGCAGTGATCTGCCTGACT...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTTGCCAAACTGCAGCTaGAAGCCCTTGATGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPLPNCS*KPLMNL Trigger: CAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTTGACAGTCACTAGATaGTTGTCTGAACCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPLTVTR*LSEPPV Trigger: CACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCATCTTCCTTCTTGTTaGAACTGTCAGAGCTGTCCT | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPHLPSC*NCQSCP Trigger: AGGACAGCTCTGACAGTTCCAACAAGAAGGAAGATG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR GCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGGACCCCAAGTCCTTTaGATTATCTTCCCATTTGAA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPGPQVL*IIFPFE Trigger: TTCAAATGGGAAGATAATGCAAAGGACTTGGGGTCC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CCA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCAGCTTTCATCTTTCTaGTCATCATTATCATCGTCA | + |
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Preference number: 4 (lower is better) Translates to: IDAHSLLDRDKGIWALLPQLSSF*SSLSSS Trigger: TGACGATGATAATGATGACCAGAAAGATGAAAGCTG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CCA 90 bp | TGCAGGTGGGACTGGCCAGGAGAGCCAAAGTCAGCAACAGCAGCATaGCTCCTGAGGGTTCAGGACCCAGAGGGAGGTGCCAAGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: CRWDWPGEPKSATAA*LLRVQDPEGGAKTS Trigger: TGAAGTCTTGGCACCTCCCTCTGGGTCCTGAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTCTCCTGGCCAGTCCCACCTGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 90 bp | CGTAGAAATACTTGCCAGCAGCATTCCCCAGGACATTCTGGGCTCTaGAGGTGGGACTGGCCAGGAGAGCCAAAGTCAGCAACAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RRNTCQQHSPGHSGL*RWDWPGEPKSATAA Trigger: TGCTGCTGTTGCTGACTTTGGCTCTCCTGGCCAGTCCCACCTGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGTATTTCTACG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 90 bp | TCTTCCCATTTGAAGCCCATCCCTGTGACGCAGAGGCCCGGTGCATaGATTCCATTGACAGTCACTAGATGCTTGTCTGAACCTCCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SSHLKPIPVTQRPGA*IPLTVTRCLSEPPV Trigger: CACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCACAGGGATGGGCTTCAAATGGGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CCA 90 bp | CATTGTCATCATCATCCTTGCCTCTGCCTTCATCTTCCTTCTTGTTaGAACTGTCAGAGCTGTCCTTTGGCTCTTTCACAGGCTCTGGGG | + |
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Preference number: 5 (lower is better) Translates to: HCHHHPCLCLHLPSC*NCQSCPLALSQALG Trigger: CCCCAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACAGTTCCAACAAGAAGGAAGATGAAGGCAGAGGCAAGGATGATGATGACAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS TCA 90 bp | TATCACGTGCTCTCCGTCCTCCAGAAGGAAGTCTATAAAGTTATCTaGCCGGGATCCATAGACATCAGTCCAGTTATTGCCAAACTGCAG | + |
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Preference number: 5 (lower is better) Translates to: YHVLSVLQKEVYKVI*PGSIDISPVIAKLQ Trigger: CTGCAGTTTGGCAATAACTGGACTGATGTCTATGGATCCCGGTCAGATAACTTTATAGACTTCCTTCTGGAGGACGGAGAGCACGTGATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTGTCAGAGCTGTCCTTaGGCTCTTTCACAGGCTCTG | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPCQSCP*ALSQAL Trigger: CAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 90 bp | CATTGTCATCCTCATCTTCATCATTGTCATCATCATCCTTGCCTCTaGCTTCATCTTCCTTCTTGTTGGAACTGTCAGAGCTGTCCTTTG | + |
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Preference number: 5 (lower is better) Translates to: HCHPHLHHCHHHPCL*LHLPSCWNCQSCPL Trigger: CAAAGGACAGCTCTGACAGTTCCAACAAGAAGGAAGATGAAGGCAGAGGCAAGGATGATGATGACAATGATGAAGATGAGGATGACAATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCGCATTATCTTCCCATTaGAAGCCCATCCCTGTGACG | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPALSSH*KPIPVT Trigger: CGTCACAGGGATGGGCTTCAAATGGGAAGATAATGC...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCACATCAGTCCAGTTATaGCCAAACTGCAGCTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPTSVQL*PNCSWK Trigger: CTTCCAGCTGCAGTTTGGCAATAACTGGACTGATGT...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTCATCTTCCTTCTTGTaGGAACTGTCAGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPSSSFL*ELSELS Trigger: GGACAGCTCTGACAGTTCCAACAAGAAGGAAGATGA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCCCTTCATCTTCCTTCTaGTTGGAACTGTCAGAGCTG | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPPSSSF*LELSEL Trigger: CAGCTCTGACAGTTCCAACAAGAAGGAAGATGAAGG...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGATAAAGGCATTTGGGCTTTGCTCCCCTTGTCATCATCATCCTaGCCTCTGCCTTCATCTTCC | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDRDKGIWALLPLSSSS*PLPSSS Trigger: GGAAGATGAAGGCAGAGGCAAGGATGATGATGACAA...GGGGAGCAAAGCCCAAATGCCTTTATCTCTGTCTAATAAACTATGTGCATCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CCA 72 bp | GACTGGCCAGGAGAGCCAAAGTCAGCAACAGCAGCATaGCTCCTGAGGGTTCAGGACCCAGAGGGAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: DWPGEPKSATAA*LLRVQDPEGGA Trigger: GGCACCTCCCTCTGGGTCCTGAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTCTCCTGGCCAGTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 72 bp | ACTTGCCAGCAGCATTCCCCAGGACATTCTGGGCTCTaGAGGTGGGACTGGCCAGGAGAGCCAAAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TCQQHSPGHSGL*RWDWPGEPKSA Trigger: TGCTGACTTTGGCTCTCCTGGCCAGTCCCACCTGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CCA 72 bp | CAGCAGCATTCCCCAGGACATTCTGGGCTCTGCAGGTaGGACTGGCCAGGAGAGCCAAAGTCAGCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QQHSPGHSGLCR*DWPGEPKSATA Trigger: TGCTGTTGCTGACTTTGGCTCTCCTGGCCAGTCCCACCTGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS TCA 72 bp | CAGGAGAGCCAAAGTCAGCAACAGCAGCATGGCTCCTaGGGGTTCAGGACCCAGAGGGAGGTGCCAAGACTT | + |
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Preference number: 6 (lower is better) Translates to: QESQSQQQQHGS*GFRTQREVPRL Trigger: AAGTCTTGGCACCTCCCTCTGGGTCCTGAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTCTCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 90 bp | TTCACAGGCTCTGGGGACCCCAAGTCCTTTGCATTATCTTCCCATTaGAAGCCCATCCCTGTGACGCAGAGGCCCGGTGCATGCATTCCA | + |
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Preference number: 6 (lower is better) Translates to: FTGSGDPKSFALSSH*KPIPVTQRPGACIP Trigger: TGGAATGCATGCACCGGGCCTCTGCGTCACAGGGATGGGCTTCAAATGGGAAGATAATGCAAAGGACTTGGGGTCCCCAGAGCCTGTGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | CGACCCCTTCTAACACCAAAGGTGGCCACACGCCCCTaGTTTGTAGTGAAGGTCAGGGAAGTCAGGCAGATC | + |
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Preference number: 6 (lower is better) Translates to: RPLLTPKVATRP*FVVKVREVRQI Trigger: GATCTGCCTGACTTCCCTGACCTTCACTACAAACAAGGGGCGTGTGGCCACCTTTGGTGTTAGAAGGGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | ATCCCTGTGACGCAGAGGCCCGGTGCATGCATTCCATaGACAGTCACTAGATGCTTGTCTGAACCTCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: IPVTQRPGACIP*TVTRCLSEPPV Trigger: CACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCACAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 90 bp | TTGAAGCCCATCCCTGTGACGCAGAGGCCCGGTGCATGCATTCCATaGACAGTCACTAGATGCTTGTCTGAACCTCCAGTGTCACTGAAG | + |
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Preference number: 6 (lower is better) Translates to: LKPIPVTQRPGACIP*TVTRCLSEPPVSLK Trigger: CTTCAGTGACACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCACAGGGATGGGCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 72 bp | TTGAAGCCCATCCCTGTGACGCAGAGGCCCGGTGCATaGATTCCATTGACAGTCACTAGATGCTTGTCTGAA | + |
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Preference number: 6 (lower is better) Translates to: LKPIPVTQRPGA*IPLTVTRCLSE Trigger: TTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCACAGGGATGGGCTTCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS GCA 72 bp | TGGCTCTTTCACAGGCTCTGGGGACCCCAAGTCCTTTaGATTATCTTCCCATTTGAAGCCCATCCCTGTGAC | + |
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Preference number: 6 (lower is better) Translates to: WLFHRLWGPQVL*IIFPFEAHPCD Trigger: GTCACAGGGATGGGCTTCAAATGGGAAGATAATGCAAAGGACTTGGGGTCCCCAGAGCCTGTGAAAGAGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | GATCCGCATGCCCTTGAGTTGCCCCTGATCTTCACCTaGAACGTAGAAATACTTGCCAGCAGCATTCCCCAG | + |
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Preference number: 6 (lower is better) Translates to: DPHALELPLIFT*NVEILASSIPQ Trigger: CTGGGGAATGCTGCTGGCAAGTATTTCTACGTTCAAGGTGAAGATCAGGGGCAACTCAAGGGCATGCGGATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | CATCTTCCTTCTTGTTGGAACTGTCAGAGCTGTCCTTaGGCTCTTTCACAGGCTCTGGGGACCCCAAGTCCT | + |
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Preference number: 6 (lower is better) Translates to: HLPSCWNCQSCP*ALSQALGTPSP Trigger: AGGACTTGGGGTCCCCAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACAGTTCCAACAAGAAGGAAGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CCA 72 bp | ATCTTCCTTCTTGTTGGAACTGTCAGAGCTGTCCTTTaGCTCTTTCACAGGCTCTGGGGACCCCAAGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: IFLLVGTVRAVL*LFHRLWGPQVL Trigger: AAGGACTTGGGGTCCCCAGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACAGTTCCAACAAGAAGGAAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 90 bp | TCATCATTGTCATCATCATCCTTGCCTCTGCCTTCATCTTCCTTCTaGTTGGAACTGTCAGAGCTGTCCTTTGGCTCTTTCACAGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSLSSSSLPLPSSSF*LELSELSFGSFTGS Trigger: AGAGCCTGTGAAAGAGCCAAAGGACAGCTCTGACAGTTCCAACAAGAAGGAAGATGAAGGCAGAGGCAAGGATGATGATGACAATGATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS TCA 72 bp | CTCTCCGTCCTCCAGAAGGAAGTCTATAAAGTTATCTaGCCGGGATCCATAGACATCAGTCCAGTTATTGCC | + |
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Preference number: 6 (lower is better) Translates to: LSVLQKEVYKVI*PGSIDISPVIA Trigger: GGCAATAACTGGACTGATGTCTATGGATCCCGGTCAGATAACTTTATAGACTTCCTTCTGGAGGACGGAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | TTATTGCCAAACTGCAGCTGGAAGCCCTTGATGAACTaGAAAACACTTAAGAAGATCCGCATGCCCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPNCSWKPLMN*KTLKKIRMPLS Trigger: ACTCAAGGGCATGCGGATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAATAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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| CDS CAA 72 bp | TCAGTCCAGTTATTGCCAAACTGCAGCTGGAAGCCCTaGATGAACTTGAAAACACTTAAGAAGATCCGCATG | + |
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Preference number: 6 (lower is better) Translates to: SVQLLPNCSWKP*MNLKTLKKIRM Trigger: CATGCGGATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAATAACTGGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000024939.2 ENSMUST00000235047.2 |
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