Pregenerated sensors for SBP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024128Ensembl transcript IDs: ENSMUST00000024940.11, ENSMUST00000181985.8, ENSMUST00000182519.2, ENSMUST00000182868.8, ENSMUST00000183017.8, ENSMUST00000183155.8, ENSMUST00000183252.8
Found 69 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGGACTaGGCTCTGAGCATGCTACTCAGCTTTCATCTTTCTGGTCATCAT | + |
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Preference number: 1 (lower is better) Translates to: ESLAERRRCHVEMQD*ALSMLLSFHLSGHH Trigger: ATGATGACCAGAAAGATGAAAGCTGAGTAGCATGCTCAGAGCTCAGTCCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| 3UTR GCA 90 bp | TTTCCCCATTTGAAGCCAATCCCTCTGACGCAGAGGCCCGGTGCATaGATTCCATTGACAGTCACTAGATGCTTGTCTGAACCTCCAGTG | + |
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Preference number: 1 (lower is better) Translates to: FPHLKPIPLTQRPGA*IPLTVTRCLSEPPV Trigger: CACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCAGAGGGATTGGCTTCAAATGGGGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| 3UTR CAA 90 bp | TTGAAGCCAATCCCTCTGACGCAGAGGCCCGGTGCATGCATTCCATaGACAGTCACTAGATGCTTGTCTGAACCTCCAGTGTCACTGAAG | + |
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Preference number: 2 (lower is better) Translates to: LKPIPLTQRPGACIP*TVTRCLSEPPVSLK Trigger: CTTCAGTGACACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCAGAGGGATTGGCTTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| 3UTR CAA 90 bp | TTTCCATCATCATCCTCATCTCCATCATCTTTGTTGTCAGCATCTTaGTTGTCAGCATCTTTGTTGTCAGCCTTATCTTCCTTGTTATTA | + |
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Preference number: 2 (lower is better) Translates to: FPSSSSSPSSLLSAS*LSASLLSALSSLLL Trigger: TAATAACAAGGAAGATAAGGCTGACAACAAAGATGCTGACAACAAAGATGCTGACAACAAAGATGATGGAGATGAGGATGATGATGGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| 3UTR TCA 72 bp | GGAGGCGCTGCCATGTGGAGATGCAGGACTGAGCTCTaGGCATGCTACTCAGCTTTCATCTTTCTGGTCATC | + |
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Preference number: 3 (lower is better) Translates to: GGAAMWRCRTEL*ACYSAFIFLVI Trigger: GATGACCAGAAAGATGAAAGCTGAGTAGCATGCTCAGAGCTCAGTCCTGCATCTCCACATGGCAGCGCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| 3UTR GCA 72 bp | TTGAAGCCAATCCCTCTGACGCAGAGGCCCGGTGCATaGATTCCATTGACAGTCACTAGATGCTTGTCTGAA | + |
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Preference number: 3 (lower is better) Translates to: LKPIPLTQRPGA*IPLTVTRCLSE Trigger: TTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCAGAGGGATTGGCTTCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTTCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: PPAWSLLVYYFLQWESLASGLCM*DWPGKP Trigger: TGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGA...AGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CCCCATTTGAAGCCAATCCCTCTGACGCAGAGGCCCGGTGCATGCATTCCATTGTCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: PHLKPIPLTQRPGACIPLSGLCM*DWPGKP Trigger: TGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGA...CAATGGAATGCATGCACCGGGCCTCTGCGTCAGAGGGATTGGCTTCAAATGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| CDS-3UTR CCA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRSGLCM*DWPGKP Trigger: TGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGA...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | TCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCTCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: SWYITSSSGRAWLRGGAASGLCM*DWPGKP Trigger: TGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGA...GGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CCCCCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTTTCCCCAGGACATTCTaGGCTCTGCATGTGGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: PPAWSLLVYYFLQWESLAFPRTF*ALHVGL Trigger: CAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAA...AGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGGGGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGTCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WSLLVYYFLQWESLAERRSGLCM*DWPGKP Trigger: TGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGA...CCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGTTCCCCAGGACATTCTaGGCTCTGCATGTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: PAWSLLVYYFLQWESLAEFPRTF*ALHVGL Trigger: CAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAA...CTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | AGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTTCCCCAGGACATTCTaGGCTCTGCATGTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: SLLVYYFLQWESLAERRRFPRTF*ALHVGL Trigger: CAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAA...GCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR GCA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGACATCAGTCCAGTTACTaGCAAACTGCAGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRHQSSY*QTAAGS Trigger: GCTTCCAGCTGCAGTTTGGCAGTAACTGGACTGATG...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGACTGCCAAACTGCAGCTaGAAGCCCTTGATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRLPNCS*KPLMNL Trigger: CAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAG...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| 3UTR CAA 72 bp | ATCCCTCTGACGCAGAGGCCCGGTGCATGCATTCCATaGACAGTCACTAGATGCTTGTCTGAACCTCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: IPLTQRPGACIP*TVTRCLSEPPV Trigger: CACTGGAGGTTCAGACAAGCATCTAGTGACTGTCAATGGAATGCATGCACCGGGCCTCTGCGTCAGAGGGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| CDS-3UTR GCA 90 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGCATCAGTCCAGTTACTaGCAAACTGCAGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: PAWSLLVYYFLQWESLAEHQSSY*QTAAGS Trigger: GCTTCCAGCTGCAGTTTGGCAGTAACTGGACTGATG...CTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR GCA 90 bp | CTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATCATCAGTCCAGTTACTaGCAAACTGCAGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: LVYYFLQWESLAERRRCHHQSSY*QTAAGS Trigger: GCTTCCAGCTGCAGTTTGGCAGTAACTGGACTGATG...ATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTCTGCCAAACTGCAGCTaGAAGCCCTTGATGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VSWYITSSSGRAWLRGGALPNCS*KPLMNL Trigger: CAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAG...AGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATCTGCCAAACTGCAGCTaGAAGCCCTTGATGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: LVYYFLQWESLAERRRCHLPNCS*KPLMNL Trigger: CAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAG...ATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR GCA 90 bp | CAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGACATCAGTCCAGTTACTaGCAAACTGCAGCTGGAAGC | + |
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Preference number: 4 (lower is better) Translates to: QPGVSWYITSSSGRAWLRHQSSY*QTAAGS Trigger: GCTTCCAGCTGCAGTTTGGCAGTAACTGGACTGATG...TCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGACTGCCAAACTGCAGCTaGAAGCCCTTGATGAACTTG | + |
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Preference number: 4 (lower is better) Translates to: QPGVSWYITSSSGRAWLRLPNCS*KPLMNL Trigger: CAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAG...TCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR TCA 90 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGGTGCATGCATTCCATTaGCAGTCACTAGATGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: PAWSLLVYYFLQWESLAEVHAFH*QSLDAC Trigger: ACAAGCATCTAGTGACTGTCAATGGAATGCATGCAC...CTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR TCA 90 bp | CTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGCATGCATTCCATTaGCAGTCACTAGATGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LVYYFLQWESLAERRRCHVHAFH*QSLDAC Trigger: ACAAGCATCTAGTGACTGTCAATGGAATGCATGCAC...ATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR TCA 90 bp | CAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGTGCATGCATTCCATTaGCAGTCACTAGATGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: QPGVSWYITSSSGRAWLRVHAFH*QSLDAC Trigger: ACAAGCATCTAGTGACTGTCAATGGAATGCATGCAC...TCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | GATGCACATAGTTTATTAGACAGAGAGATAAAGGCATTTGGGCTTTGCTCCCCCTTCCCCAGGACATTCTaGGCTCTGCATGTGGGACTG | + |
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Preference number: 4 (lower is better) Translates to: DAHSLLDREIKAFGLCSPFPRTF*ALHVGL Trigger: CAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAA...GGGGGAGCAAAGCCCAAATGCCTTTATCTCTCTGTCTAATAAACTATGTGCATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183017.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCAGCTTTCATCTTTCTaGTCATCATCATCGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: WSLLVYYFLQWESLAERRQLSSF*SSSSFP Trigger: TGGAAACGATGATGATGACCAGAAAGATGAAAGCTG...CCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CCA 90 bp | CAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGACAGCTTTCATCTTTCTaGTCATCATCATCGTTTCCA | + |
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Preference number: 4 (lower is better) Translates to: QPGVSWYITSSSGRAWLRQLSSF*SSSSFP Trigger: TGGAAACGATGATGATGACCAGAAAGATGAAAGCTG...TCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR TCA 90 bp | GATGCACATAGTTTATTAGACAGAGAGATAAAGGCATTTGGGCTTTGCTCCCCCGTGCATGCATTCCATTaGCAGTCACTAGATGCTTGT | + |
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Preference number: 4 (lower is better) Translates to: DAHSLLDREIKAFGLCSPVHAFH*QSLDAC Trigger: ACAAGCATCTAGTGACTGTCAATGGAATGCATGCAC...GGGGGAGCAAAGCCCAAATGCCTTTATCTCTCTGTCTAATAAACTATGTGCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGGCCGCATGCCCTTGAGTaGCCCCTGATCTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSGRAWLRGGAAMWRCRPHALE*PLIFTL Trigger: CAAGGTGAAGATCAGGGGCAACTCAAGGGCATGCGG...CCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CCA 90 bp | TGCCAGCAGCATTCCCCAGGACATTCTGGGCTCTGCATGTGGGACTaGCCAGGAAAGCCAAAGTCAGCAACAGCAGCATGGCTCCTGAGG | + |
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Preference number: 5 (lower is better) Translates to: CQQHSPGHSGLCMWD*PGKPKSATAAWLLR Trigger: CCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182868.8 |
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| CDS-3UTR CAA 90 bp | CCCCCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTCCGCATGCCCTTGAGTaGCCCCTGATCTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: PPAWSLLVYYFLQWESLAPHALE*PLIFTL Trigger: CAAGGTGAAGATCAGGGGCAACTCAAGGGCATGCGG...AGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGGGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTCCGCATGCCCTTGAGTaGCCCCTGATCTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSWYITSSSGRAWLRGGAPHALE*PLIFTL Trigger: CAAGGTGAAGATCAGGGGCAACTCAAGGGCATGCGG...AGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGGTGCAGCTGGAAGCCCTaGATGAACTTGAAAACACTT | + |
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Preference number: 5 (lower is better) Translates to: SSSGRAWLRGGAAMWRCRCSWKP*MNLKTL Trigger: AAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCA...CCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS GCA 90 bp | CGTAGAAATACTTGCCAGCAGCATTCCCCAGGACATTCTGGGCTCTaGATGTGGGACTGGCCAGGAAAGCCAAAGTCAGCAACAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: RRNTCQQHSPGHSGL*MWDWPGKPKSATAA Trigger: TGCTGCTGTTGCTGACTTTGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGTATTTCTACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | CCCCCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGGTGCATGCATTCCATaGACAGTCACTAGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: PPAWSLLVYYFLQWESLAGACIP*TVTRCL Trigger: CAAGCATCTAGTGACTGTCAATGGAATGCATGCACC...AGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGGGGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGAGGTGCATGCATTCCATaGACAGTCACTAGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRGACIP*TVTRCL Trigger: CAAGCATCTAGTGACTGTCAATGGAATGCATGCACC...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCGGTGCATGCATTCCATaGACAGTCACTAGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: SWYITSSSGRAWLRGGAAGACIP*TVTRCL Trigger: CAAGCATCTAGTGACTGTCAATGGAATGCATGCACC...GGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGGTCTCCATCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SSSGRAWLRGGAAMWRCRSPSSL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGATGGAGA...CCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGGTCATCTCCATCATCTTaGTTGTCAGCATCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: SSSGRAWLRGGAAMWRCRSSPSS*LSASLL Trigger: CAACAAAGATGCTGACAACAAAGATGATGGAGATGA...CCTGCATCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATGCAGCTGGAAGCCCTaGATGAACTTGAAAACACTT | + |
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Preference number: 5 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRCSWKP*MNLKTL Trigger: AAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCA...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGGTGCATGCATTCCATaGACAGTCACTAGATGCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSWYITSSSGRAWLRGGAGACIP*TVTRCL Trigger: CAAGCATCTAGTGACTGTCAATGGAATGCATGCACC...AGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCAGCTGGAAGCCCTaGATGAACTTGAAAACACTT | + |
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Preference number: 5 (lower is better) Translates to: SLLVYYFLQWESLAERRRCSWKP*MNLKTL Trigger: AAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCA...GCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATTGTCAGCATCTTTGTaGTCAGCCTTATCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRLSASL*SALSSL Trigger: CAAGGAAGATAAGGCTGACAACAAAGATGCTGACAA...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCTTGTCAGCATCTTTGTaGTCAGCCTTATCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SWYITSSSGRAWLRGGAALSASL*SALSSL Trigger: CAAGGAAGATAAGGCTGACAACAAAGATGCTGACAA...GGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTTTGTCAGCATCTTTGTaGTCAGCCTTATCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: VSWYITSSSGRAWLRGGALSASL*SALSSL Trigger: CAAGGAAGATAAGGCTGACAACAAAGATGCTGACAA...AGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTTGTCAGCATCTTTGTaGTCAGCCTTATCTTCCTTG | + |
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Preference number: 5 (lower is better) Translates to: SLLVYYFLQWESLAERRRLSASL*SALSSL Trigger: CAAGGAAGATAAGGCTGACAACAAAGATGCTGACAA...GCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | TCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCTTGTCAGCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SWYITSSSGRAWLRGGAALSASL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGCTGACAA...GGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATTGTCAGCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRLSASL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGCTGACAA...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTGCCATGTGGAGATCTCCATCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: ITSSSGRAWLRGGAAMWRSPSSL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGATGGAGA...TCTCCACATGGCAGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | CCCCCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTAAGCCCTTGATGAACTaGAAAACACTTAAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: PPAWSLLVYYFLQWESLAKPLMN*KTLKKI Trigger: GATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTT...AGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | AGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTTGTCAGCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: SLLVYYFLQWESLAERRRLSASL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGCTGACAA...GCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | GTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAGGAGGCGCTTCTCCATCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: VSWYITSSSGRAWLRGGASPSSL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGATGGAGA...AGCGCCTCCTCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGTCATCTCCATCATCTTaGTTGTCAGCATCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: PAWSLLVYYFLQWESLAESSPSS*LSASLL Trigger: CAACAAAGATGCTGACAACAAAGATGATGGAGATGA...CTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CCA 90 bp | AGGAAAGCCAAAGTCAGCAACAGCAGCATGGCTCCTGAGGGTTTGTaGTACAATCTGGCACTTAGATGCCACAATGGTAAGATTTCAGTG | + |
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Preference number: 5 (lower is better) Translates to: RKAKVSNSSMAPEGL*YNLALRCHNGKISV Trigger: CACTGAAATCTTACCATTGTGGCATCTAAGTGCCAGATTGTACCACAAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTTTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182868.8 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGAAGCCCTTGATGAACTaGAAAACACTTAAGAAGATC | + |
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Preference number: 5 (lower is better) Translates to: PAWSLLVYYFLQWESLAEKPLMN*KTLKKI Trigger: GATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTT...CTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | CAGCCTGGAGTCTCCTGGTATATTACTTCCTCCAGTGGGAGAGCTTGGCTGAGATCATCTCCATCATCTTaGTTGTCAGCATCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: QPGVSWYITSSSGRAWLRSSPSS*LSASLL Trigger: CAACAAAGATGCTGACAACAAAGATGATGGAGATGA...TCTCAGCCAAGCTCTCCCACTGGAGGAAGTAATATACCAGGAGACTCCAGGCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGAGATAAAGGCATTTGGGCTTTGCTCCTTGTCAGCATCTTTGTaGTCAGCATCTTTGTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDREIKAFGLCSLSASL*SASLLS Trigger: TGACAACAAAGATGCTGACAACAAAGATGCTGACAA...GGAGCAAAGCCCAAATGCCTTTATCTCTCTGTCTAATAAACTATGTGCATCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024940.11 ENSMUST00000183252.8 |
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| CDS-3UTR CAA 90 bp | ATAGATGCACATAGTTTATTAGACAGAGAGATAAAGGCATTTGGGCTTTGCTCCTCATCTCCATCATCTTaGTTGTCAGCATCTTTGTTG | + |
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Preference number: 5 (lower is better) Translates to: IDAHSLLDREIKAFGLCSSSPSS*LSASLL Trigger: CAACAAAGATGCTGACAACAAAGATGATGGAGATGA...GGAGCAAAGCCCAAATGCCTTTATCTCTCTGTCTAATAAACTATGTGCATCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000024940.11 ENSMUST00000183252.8 |
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| CDS GCA 72 bp | ACTTGCCAGCAGCATTCCCCAGGACATTCTGGGCTCTaGATGTGGGACTGGCCAGGAAAGCCAAAGTCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TCQQHSPGHSGL*MWDWPGKPKSA Trigger: TGCTGACTTTGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CCA 72 bp | CAGCAGCATTCCCCAGGACATTCTGGGCTCTGCATGTaGGACTGGCCAGGAAAGCCAAAGTCAGCAACAGCA | + |
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Preference number: 6 (lower is better) Translates to: QQHSPGHSGLCM*DWPGKPKSATA Trigger: TGCTGTTGCTGACTTTGGCTTTCCTGGCCAGTCCCACATGCAGAGCCCAGAATGTCCTGGGGAATGCTGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183017.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS GCA 72 bp | AAAGGTGGCCACACGCCCCTTGAACGTAGAAATACTTaGCAGCAGCATTCCCCAGGACATTCTGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: KGGHTPLERRNT*QQHSPGHSGLC Trigger: GCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGTATTTCTACGTTCAAGGGGCGTGTGGCCACCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000183017.8 |
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| CDS GCA 72 bp | GTTGCCCCTGATCTTCACCTTGAACGTAGAAATACTTaGCAGCAGCATTCCCCAGGACATTCTGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: VAPDLHLERRNT*QQHSPGHSGLC Trigger: GCAGAGCCCAGAATGTCCTGGGGAATGCTGCTGGCAAGTATTTCTACGTTCAAGGTGAAGATCAGGGGCAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CCA 72 bp | GACTGGCCAGGAAAGCCAAAGTCAGCAACAGCAGCATaGCTCCTGAGGGTTTGTGGTACAATCTGGCACTTA | + |
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Preference number: 6 (lower is better) Translates to: DWPGKPKSATAA*LLRVCGTIWHL Trigger: TAAGTGCCAGATTGTACCACAAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTTTCCTGGCCAGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182868.8 |
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| CDS CAA 90 bp | GCCAGGAAAGCCAAAGTCAGCAACAGCAGCATGGCTCCTGAGGGTTaGTGGTACAATCTGGCACTTAGATGCCACAATGGTAAGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: ARKAKVSNSSMAPEG*WYNLALRCHNGKIS Trigger: TGAAATCTTACCATTGTGGCATCTAAGTGCCAGATTGTACCACAAACCCTCAGGAGCCATGCTGCTGTTGCTGACTTTGGCTTTCCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182868.8 |
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| CDS GCA 72 bp | AGGCAGATCACTGCACTGCCCTCTACCTTTATCACGTaGTCTCCGTCCTCCAGAAGGAAGTCTATAAAGTTA | + |
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Preference number: 6 (lower is better) Translates to: RQITALPSTFIT*SPSSRRKSIKL Trigger: TAACTTTATAGACTTCCTTCTGGAGGACGGAGAGCACGTGATAAAGGTAGAGGGCAGTGCAGTGATCTGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182868.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CAA 72 bp | TTACTGCCAAACTGCAGCTGGAAGCCCTTGATGAACTaGAAAACACTTAAGAAGATCCGCATGCCCTTGAGT | + |
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Preference number: 6 (lower is better) Translates to: LLPNCSWKPLMN*KTLKKIRMPLS Trigger: ACTCAAGGGCATGCGGATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAGTAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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| CDS CAA 72 bp | TCAGTCCAGTTACTGCCAAACTGCAGCTGGAAGCCCTaGATGAACTTGAAAACACTTAAGAAGATCCGCATG | + |
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Preference number: 6 (lower is better) Translates to: SVQLLPNCSWKP*MNLKTLKKIRM Trigger: CATGCGGATCTTCTTAAGTGTTTTCAAGTTCATCAAGGGCTTCCAGCTGCAGTTTGGCAGTAACTGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000024940.11 ENSMUST00000181985.8 ENSMUST00000182519.2 ENSMUST00000182868.8 ENSMUST00000183155.8 ENSMUST00000183252.8 |
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