Pregenerated sensors for SBNO1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038095Ensembl transcript IDs: ENSMUST00000065263.12, ENSMUST00000168651.6, ENSMUST00000196329.5, ENSMUST00000196644.5, ENSMUST00000196711.5, ENSMUST00000197777.2, ENSMUST00000198420.5, ENSMUST00000199004.5, ENSMUST00000199808.5, ENSMUST00000200474.5, ENSMUST00000200674.2
Found 539 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR TCA 90 bp | CAGCACTGCATTCTGGACACTTGGGAGCAGGTTCCTGGGAGAGGCTaGAGGCAGCAACGTGGCATCGGGGGAACAGCGTGCACTCTTCAT | + |
Preference number: 1 (lower is better) Translates to: QHCILDTWEQVPGRG*RQQRGIGGTACTLH Trigger: ATGAAGAGTGCACGCTGTTCCCCCGATGCCACGTTGCTGCCTTCAGCCTCTCCCAGGAACCTGCTCCCAAGTGTCCAGAATGCAGTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | AAAATGATGGCAGCACTGCATTCTGGACACTTGGGAGCAGGTTCCTaGGAGAGGCTGAAGGCAGCAACGTGGCATCGGGGGAACAGCGTG | + |
Preference number: 1 (lower is better) Translates to: KMMAALHSGHLGAGS*ERLKAATWHRGNSV Trigger: CACGCTGTTCCCCCGATGCCACGTTGCTGCCTTCAGCCTCTCCCAGGAACCTGCTCCCAAGTGTCCAGAATGCAGTGCTGCCATCATTTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | CAGTGCCCCAGTCACTGCAACAGCAGCAAGCTCCTACTAGACGCCTaGGTGGGGTCTGGGTTAAGAGGCCAGAATCAGAAAGGCCACACT | + |
Preference number: 1 (lower is better) Translates to: QCPSHCNSSKLLLDA*VGSGLRGQNQKGHT Trigger: AGTGTGGCCTTTCTGATTCTGGCCTCTTAACCCAGACCCCACTCAGGCGTCTAGTAGGAGCTTGCTGCTGTTGCAGTGACTGGGGCACTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | CTGCACCACCACCAACAATCTGACTGGAACAAGAGAGGGCAAGCCTaGAGCACAGAGGTTGCTAGGGGAGGAACATGGCCTTCCTCTCCA | + |
Preference number: 1 (lower is better) Translates to: LHHHQQSDWNKRGQA*STEVARGGTWPSSP Trigger: TGGAGAGGAAGGCCATGTTCCTCCCCTAGCAACCTCTGTGCTGCAGGCTTGCCCTCTCTTGTTCCAGTCAGATTGTTGGTGGTGGTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | TACTGTCTACCTGCAAGGGTTTCCCATCCGGCAAACAGCAGGAGCTaGGGGACTGGAGCAGCCTCAACTGAAAGCAAGAATGAGTCAGGC | + |
Preference number: 1 (lower is better) Translates to: YCLPARVSHPANSRS*GTGAASTESKNESG Trigger: GCCTGACTCATTCTTGCTTTCAGTTGAGGCTGCTCCAGTCCCTCAGCTCCTGCTGTTTGCCGGATGGGAAACCCTTGCAGGTAGACAGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | CCTCAAGGAAGCTGGAGGAAAGACACGTGTCCCCTCTACTCTGTTTaGGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACCCC | + |
Preference number: 1 (lower is better) Translates to: PQGSWRKDTCPLYSV*AISFAAFFQVCPYP Trigger: GGGGTAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGGACACGTGTCTTTCCTCCAGCTTCCTTGAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | AAGGCTAAGGCAACTCCAAGTAACAGAGGCCAGCTATCCTATGCCTaGAGTCCCCAGGGAGGGCCTAAACAAGAGTCCACTTCGTTAGTA | + |
Preference number: 1 (lower is better) Translates to: KAKATPSNRGQLSYA*SPQGGPKQESTSLV Trigger: TACTAACGAAGTGGACTCTTGTTTAGGCCCTCCCTGGGGACTCCAGGCATAGGATAGCTGGCCTCTGTTACTTGGAGTTGCCTTAGCCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | CTCCACAGACTTCAGGAAGGGGCTCAGTCAGACTCTAAGGCTACCTaGAAGGCTAAGGCAACTCCAAGTAACAGAGGCCAGCTATCCTAT | + |
Preference number: 1 (lower is better) Translates to: LHRLQEGAQSDSKAT*KAKATPSNRGQLSY Trigger: ATAGGATAGCTGGCCTCTGTTACTTGGAGTTGCCTTAGCCTTCCAGGTAGCCTTAGAGTCTGACTGAGCCCCTTCCTGAAGTCTGTGGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | TCTCCAGAGCTCAGCATCTCTGCTTATAGCTTATCCAGCCAGAAATaGGCCCCCAAAACTGAACCTGCCTTGTGTGCTCGTGGTAGCTTC | + |
Preference number: 1 (lower is better) Translates to: SPELSISAYSLSSQK*APKTEPALCARGSF Trigger: GAAGCTACCACGAGCACACAAGGCAGGTTCAGTTTTGGGGGCTCATTTCTGGCTGGATAAGCTATAAGCAGAGATGCTGAGCTCTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | AGCAGGACCTGCATAAACACATATCCACACACAGAACGAGGGGGCTaGCACCTTAGGACACAGAATCGTTCTCATTCCTCATCCTCTGTG | + |
Preference number: 1 (lower is better) Translates to: SRTCINTYPHTERGG*HLRTQNRSHSSSSV Trigger: CACAGAGGATGAGGAATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGATATGTGTTTATGCAGGTCCTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | TGCCTAAATTTCTCAACAGTCATCACTGAGGCCCAATTCAAATGCTaGTACACACAGCCACAGCCGGCCTGGAGCTTGCGATCCTCTAGT | + |
Preference number: 1 (lower is better) Translates to: CLNFSTVITEAQFKC*YTQPQPAWSLRSSS Trigger: ACTAGAGGATCGCAAGCTCCAGGCCGGCTGTGGCTGTGTGTATCAGCATTTGAATTGGGCCTCAGTGATGACTGTTGAGAAATTTAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR GCA 90 bp | ACCTGTGGGGTCAGAGATATCCAACTCCTTATACACACTGTAACGTaGAGCCAGGCTATGAGCTACTGTCTACCTGCAAGGGTTTCCCAT | + |
Preference number: 1 (lower is better) Translates to: TCGVRDIQLLIHTVT*SQAMSYCLPARVSH Trigger: ATGGGAAACCCTTGCAGGTAGACAGTAGCTCATAGCCTGGCTGCACGTTACAGTGTGTATAAGGAGTTGGATATCTCTGACCCCACAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | TGTTTCATGTTGCTGGGCCGCATAGGTAACTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATCAATGGTCTCTTCAGAGATGGAGGT | + |
Preference number: 1 (lower is better) Translates to: CFMLLGRIGNCLKLQ*RQPAIINGLFRDGG Trigger: ACCTCCATCTCTGAAGAGACCATTGATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCAGTTACCTATGCGGCCCAGCAACATGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR GCA 90 bp | CGCAATGAAACGTTCTTTGATGAAAAGGACACCCAGATCCTCATCTaGTCCAGGAGCAAGTGTCACAGCGTCATCACCATGAATGACCTG | + |
Preference number: 1 (lower is better) Translates to: RNETFFDEKDTQILI*SRSKCHSVITMNDL Trigger: CAGGTCATTCATGGTGATGACGCTGTGACACTTGCTCCTGGAGCAGATGAGGATCTGGGTGTCCTTTTCATCAAAGAACGTTTCATTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | ACAGAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTaGAGGAAACTGAACCTACTTTACATGACAGTGGCTGAAAAAGAC | + |
Preference number: 1 (lower is better) Translates to: TELSEVLGACVALRP*RKLNLLYMTVAEKD Trigger: GTCTTTTTCAGCCACTGTCATGTAAAGTAGGTTCAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | GACTGTCCTGGAACACACGGGATAAATCGAATTCTACCTCCCCAGTaGTGGGAGAAAAGGCATGCAGTACCACTGTCTGGTTTAGAATTT | + |
Preference number: 1 (lower is better) Translates to: DCPGTHGINRILPPQ*WEKRHAVPLSGLEF Trigger: AAATTCTAAACCAGACAGTGGTACTGCATGCCTTTTCTCCCAGCACTGGGGAGGTAGAATTCGATTTATCCCGTGTGTTCCAGGACAGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR GCA 90 bp | CATGCATGTATGTGGTGTTTCACTCTCTGTAGCATAGGCTTGCCCTaGCTCTGCCTCCCAAACTTTGGGATGAAAAGGTGTTTATCACCA | + |
Preference number: 1 (lower is better) Translates to: HACMWCFTLCSIGLP*LCLPNFGMKRCLSP Trigger: TGGTGATAAACACCTTTTCATCCCAAAGTTTGGGAGGCAGAGGCAGGGCAAGCCTATGCTACAGAGAGTGAAACACCACATACATGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CCA 90 bp | GCACAAGTTTATTGCAGAGACACGGTGCACCTCTCCCACCCCTCGTaGTTGATGATAAAGGTGGTTATGAGAGGAAGTAAGAGTAGTTTG | + |
Preference number: 1 (lower is better) Translates to: AQVYCRDTVHLSHPS*LMIKVVMRGSKSSL Trigger: CAAACTACTCTTACTTCCTCTCATAACCACCTTTATCATCAACCACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAATAAACTTGTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | GCTGGCACCTTAGGACACAGAATCGTTCTCATTCCTCATCCTCTGTaGCTTGGTTTCCTGAAGAAAGCAAGTTCAGTTACACAGCTCTTC | + |
Preference number: 1 (lower is better) Translates to: AGTLGHRIVLIPHPL*LGFLKKASSVTQLF Trigger: GAAGAGCTGTGTAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACAGAGGATGAGGAATGAGAACGATTCTGTGTCCTAAGGTGCCAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | AGCCTTGTGAGGGATTTTCATGCAAAGAATTTCTGTCTACTCAGCTaGAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGG | + |
Preference number: 1 (lower is better) Translates to: SLVRDFHAKNFCLLS*SHDMECLVHFSTRG Trigger: CCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGAAATTCTTTGCATGAAAATCCCTCACAAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | GATAGCATAGAAGAGAAGATGGGCACGGAGAAGACTGCACCTGCTTaGACCTCCCTGTTTCTTTCCCTTATAGGACTCATTGGATTTAGA | + |
Preference number: 1 (lower is better) Translates to: DSIEEKMGTEKTAPA*TSLFLSLIGLIGFR Trigger: TCTAAATCCAATGAGTCCTATAAGGGAAAGAAACAGGGAGGTGCAAGCAGGTGCAGTCTTCTCCGTGCCCATCTTCTCTTCTATGCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | AGAGGCAGGCAGATCTCTAGGGTTTCAGAACAGCCAGGGATATTATaGAAAGTCCTTGTCTGCCTCCAATCCCCAGAAAGAAAACACAAT | + |
Preference number: 1 (lower is better) Translates to: RGRQISRVSEQPGIL*KVLVCLQSPERKHN Trigger: ATTGTGTTTTCTTTCTGGGGATTGGAGGCAGACAAGGACTTTGCATAATATCCCTGGCTGTTCTGAAACCCTAGAGATCTGCCTGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CCA 90 bp | GCCGTAGAGATGCCCCAACTAACTGAACATTCAATGTGTGGATCCTaGCTTAATAGCAGCTTTTCTGAAGCTCCATTCCTAGGAAGTGCA | + |
Preference number: 1 (lower is better) Translates to: AVEMPQLTEHSMCGS*LNSSFSEAPFLGSA Trigger: TGCACTTCCTAGGAATGGAGCTTCAGAAAAGCTGCTATTAAGCCAGGATCCACACATTGAATGTTCAGTTAGTTGGGGCATCTCTACGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | CACCTTAGGACACAGAATCGTTCTCATTCCTCATCCTCTGTGACTTaGTTTCCTGAAGAAAGCAAGTTCAGTTACACAGCTCTTCCTCAG | + |
Preference number: 1 (lower is better) Translates to: HLRTQNRSHSSSSVT*FPEESKFSYTALPQ Trigger: CTGAGGAAGAGCTGTGTAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACAGAGGATGAGGAATGAGAACGATTCTGTGTCCTAAGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 90 bp | ACCTCTGCGTTCCACAGCTTGGATAAAATCACTAAATTCTCTGAATaGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCAT | + |
Preference number: 1 (lower is better) Translates to: TSAFHSLDKITKFSE*SSLTPYSKTVHVGH Trigger: ATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGAGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
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3UTR TCA 90 bp | CCAATGCAGTTTTACAGCAAACTAAATCCTAGAAACTTGAGAGAATaGGAGCCCAAGCGCTCCATCAAGTCTCTGCCACTAAACACACCT | + |
Preference number: 1 (lower is better) Translates to: PMQFYSKLNPRNLRE*EPKRSIKSLPLNTP Trigger: AGGTGTGTTTAGTGGCAGAGACTTGATGGAGCGCTTGGGCTCTCATTCTCTCAAGTTTCTAGGATTTAGTTTGCTGTAAAACTGCATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | GACACAGAATCGTTCTCATTCCTCATCCTCTGTGACTTGGTTTCCTaGAGAAAGCAAGTTCAGTTACACAGCTCTTCCTCAGGCTTTTAC | + |
Preference number: 1 (lower is better) Translates to: DTESFSFLILCDLVS*RKQVQLHSSSSGFY Trigger: GTAAAAGCCTGAGGAAGAGCTGTGTAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACAGAGGATGAGGAATGAGAACGATTCTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | AGCTTTCTGTCTGTCCCACCACACTACCTACCTTTAATTCTGTTTTaGAAGGGTTGTCAGATGCCTGGTATCTGTGGACTTTTCCTCACT | + |
Preference number: 1 (lower is better) Translates to: SFLSVPPHYLPLILF*KGCQMPGICGLFLT Trigger: AGTGAGGAAAAGTCCACAGATACCAGGCATCTGACAACCCTTTCAAAACAGAATTAAAGGTAGGTAGTGTGGTGGGACAGACAGAAAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | CAGCAGTGTGTGTTGGCGATGTGGGTAACAAGACCCCCACAGCTGTaGGGCAAAGAAGAAATCTTAAACACAAAACTATTTACTCAGCTA | + |
Preference number: 1 (lower is better) Translates to: QQCVLAMWVTRPPQL*GKEEILNTKLFTQL Trigger: TAGCTGAGTAAATAGTTTTGTGTTTAAGATTTCTTCTTTGCCTCACAGCTGTGGGGGTCTTGTTACCCACATCGCCAACACACACTGCTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | AGAAGAACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCAACG | + |
Preference number: 1 (lower is better) Translates to: RRTSSILKVTPVKLS*RAMYIPLSFISIAT Trigger: CGTTGCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
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3UTR TCA 90 bp | CTTTCTCACCAACTTGCATTTATAGAAATACTTTCACTGCTTTTCTaGCTGCACCACCACCAACAATCTGACTGGAACAAGAGAGGGCAA | + |
Preference number: 1 (lower is better) Translates to: LSHQLAFIEILSLLF*LHHHQQSDWNKRGQ Trigger: TTGCCCTCTCTTGTTCCAGTCAGATTGTTGGTGGTGGTGCAGTCAGAAAAGCAGTGAAAGTATTTCTATAAATGCAAGTTGGTGAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 90 bp | GATTTCTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTTGTTaGAATCGCTCTCTAGCGATAACCCACAGCTTGACTGCTTTGTTA | + |
Preference number: 1 (lower is better) Translates to: DFFILCSASIKSAAC*NRSLAITHSLTALL Trigger: TAACAAAGCAGTCAAGCTGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAGAAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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3UTR GCA 90 bp | TTTCAAAGACATGCATCGTCAACAAAAGCTACAAATGAACCTGAATaGATGGCACGCAACCCTTCACTTCATGCTGTAGGAAACATTGTG | + |
Preference number: 1 (lower is better) Translates to: FQRHASSTKATNEPE*MARNPSLHAVGNIV Trigger: CACAATGTTTCCTACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTTTGTTGACGATGCATGTCTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | GTAAAGAGAGCAAACTGCTTAGCCTGCCTAGCTTTCTCACCAACTTaGATTTATAGAAATACTTTCACTGCTTTTCTGACTGCACCACCA | + |
Preference number: 1 (lower is better) Translates to: VKRANCLACLAFSPT*IYRNTFTAFLTAPP Trigger: TGGTGGTGCAGTCAGAAAAGCAGTGAAAGTATTTCTATAAATGCAAGTTGGTGAGAAAGCTAGGCAGGCTAAGCAGTTTGCTCTCTTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | AACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTaGAATGTACATTCCTCTAAGCTTCATATCCATAGCAACGATTTC | + |
Preference number: 1 (lower is better) Translates to: NFLNFEGHSSKAQLP*NVHSSKLHIHSNDF Trigger: GAAATCGTTGCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
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3UTR TCA 90 bp | CAGTATAGAAAACAGATTACGGACGTTTGTTGTAAAGTAAATCTCTaGCTGTCACCTGTGGGGTCAGAGATATCCAACTCCTTATACACA | + |
Preference number: 1 (lower is better) Translates to: QYRKQITDVCCKVNL*LSPVGSEISNSLYT Trigger: TGTGTATAAGGAGTTGGATATCTCTGACCCCACAGGTGACAGTCAGAGATTTACTTTACAACAAACGTCCGTAATCTGTTTTCTATACTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 90 bp | CAATGTTTCTCTCCATGTGACTTCTGTGGGAATCTTGATTACACATaGTTTCAAAGACATGCATCGTCAACAAAAGCTACAAATGAACCT | + |
Preference number: 1 (lower is better) Translates to: QCFSPCDFCGNLDYT*FQRHASSTKATNEP Trigger: AGGTTCATTTGTAGCTTTTGTTGACGATGCATGTCTTTGAAAGCATGTGTAATCAAGATTCCCACAGAAGTCACATGGAGAGAAACATTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTAGGCCAGCTATCCTATaGCTGGAGTCCCCAGGGAGG | + |
Preference number: 2 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIRPAIL*LESPGR Trigger: CCTCCCTGGGGACTCCAGGCATAGGATAGCTGGCCT...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCAGCTATCCTATGCCTaGAGTCCCCAGGGAGGGCCT | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKQLSYA*SPQGGP Trigger: AGGCCCTCCCTGGGGACTCCAGGCATAGGATAGCTG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTAACACTCGGGTCTGCTaGTCAGAGCTGCACCGCTCA | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPNTRVC*SELHRS Trigger: TGAGCGGTGCAGCTCTGAGCAGCAGACCCGAGTGTT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTCCTGGGTGCATGTGTaGCACTCAGACCCTGCAGGA | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKSWVHV*HSDPAG Trigger: TCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCCCCTCTACTCTGTTTaGGCCATCAGCTTTGCTGCC | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPPLYSV*AISFAA Trigger: GGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGAGGGGGACTGCTTGCTaGTCACTGCCTGAGATACAA | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKRGTAC*SLPEIQ Trigger: TTGTATCTCAGGCAGTGATCAGCAAGCAGTCCCCCT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTACAGTGGGTAAAGGCTaGCCAGCTTTCTGTCTGTCC | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPTVGKG*PAFCLS Trigger: GGACAGACAGAAAGCTGGTCAGCCTTTACCCACTGT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAGGCCAGCTATCCTATaGCTGGAGTCCCCAGGGAGG | + |
Preference number: 2 (lower is better) Translates to: LFTKKTREILQVLLWKHQRPAIL*LESPGR Trigger: CCTCCCTGGGGACTCCAGGCATAGGATAGCTGGCCT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR GCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTATTGCAGAGACACGGTaGACCTCTCCCACCCCTCGT | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFIAETR*TSPTPR Trigger: ACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAAT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTAGAGTGCAGAGAGGCTaGGCACCAATTCCAGATGTC | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPRVQRG*APIPDV Trigger: GACATCTGGAATTGGTGCCCAGCCTCTCTGCACTCT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTCTCTCCCCAGGAGACTaGCATGCTGACTCAGTCCTG | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFLSPGD*HADSVL Trigger: CAGGACTGAGTCAGCATGCCAGTCTCCTGGGGAGAG...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTAGAAACTTGAGAGAATaGGAGCCCAAGCGCTCCATC | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPRNLRE*EPKRSI Trigger: GATGGAGCGCTTGGGCTCTCATTCTCTCAAGTTTCT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGAGAAACTTGAGAGAATaGGAGCCCAAGCGCTCCATC | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKRNLRE*EPKRSI Trigger: GATGGAGCGCTTGGGCTCTCATTCTCTCAAGTTTCT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGTGGCTGAAAAAGACATaGCTGCCAACGAGTGACTTT | + |
Preference number: 2 (lower is better) Translates to: ELSEVLGACVALRPCRKLWLKKT*LPTSDF Trigger: AAAGTCACTCGTTGGCAGTCATGTCTTTTTCAGCCA...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR TCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTATGAGCCCCCAAAACTaGACCTGCCTTGTGTGCTCG | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFMSPQN*TCLVCS Trigger: CGAGCACACAAGGCAGGTTCAGTTTTGGGGGCTCAT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAAGAGAGGGCAAGCCTaGAGCACAGAGGTTGCTAGG | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGKRGQA*STEVAR Trigger: CCTAGCAACCTCTGTGCTGCAGGCTTGCCCTCTCTT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGACTCTAAGGCTACCTaGAAGGCTAAGGCAACTCCA | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKDSKAT*KAKATP Trigger: TGGAGTTGCCTTAGCCTTCCAGGTAGCCTTAGAGTC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTGACTCTAAGGCTACCTaGAAGGCTAAGGCAACTCCA | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPDSKAT*KAKATP Trigger: TGGAGTTGCCTTAGCCTTCCAGGTAGCCTTAGAGTC...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAATCCTGGGTGCATGTGTaGCACTCAGACCCTGCAGGA | + |
Preference number: 2 (lower is better) Translates to: PLHLLSNASHSGPSANMESWVHV*HSDPAG Trigger: TCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGA...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGGCTGCACCGCTCAAGTaGGAGAAGGCATCTCAGAGG | + |
Preference number: 2 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKAAPLK*EKASQR Trigger: CCTCTGAGATGCCTTCTCCCACTTGAGCGGTGCAGC...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGCTAGGGGAGGAACATaGCCTTCCTCTCCAGCAAGT | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGARGGT*PSSPAS Trigger: ACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCTAGC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | ATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTATaGCAGAGACACGGTGCACCTCTCCCACCCCTCGTGGTTGATGAT | + |
Preference number: 2 (lower is better) Translates to: IKYPLHKEVEPGTSL*QRHGAPLPPLVVDD Trigger: ATCATCAACCACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAATAAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAGGGGGACTGCTTGCTaGTCACTGCCTGAGATACAA | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTRGTAC*SLPEIQ Trigger: TTGTATCTCAGGCAGTGATCAGCAAGCAGTCCCCCT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTGAGAAATCCTGCAGGTaGTGCTTTGGAAACACCAGA | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPEKSCR*CFGNTR Trigger: TCTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTC...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAAGAGAGGGCAAGCCTaGAGCACAGAGGTTGCTAGG | + |
Preference number: 2 (lower is better) Translates to: PLHLLSNASHSGPSANMEKRGQA*STEVAR Trigger: CCTAGCAACCTCTGTGCTGCAGGCTTGCCCTCTCTT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTAAGGGAAAGCCAGTCTaGGAAGTTCCAAGCCTTTTC | + |
Preference number: 2 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIKGKPV*EVPSLF Trigger: GAAAAGGCTTGGAACTTCCCAGACTGGCTTTCCCTT...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAAAAGTTGCATCCACTaGGCAAAATGTGCCCAAGAA | + |
Preference number: 2 (lower is better) Translates to: QRLGKGGPILFSGATKGDKSCIH*AKCAQE Trigger: TTCTTGGGCACATTTTGCCCAGTGGATGCAACTTTT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAGAGTGCAGAGAGGCTaGGCACCAATTCCAGATGTC | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTRVQRG*APIPDV Trigger: GACATCTGGAATTGGTGCCCAGCCTCTCTGCACTCT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | GCAGACAGCCAGCCATTATCAATGGTCTCTTCAGAGATGGAGGTTTaGTACCAAACATCAGGAGGAGTGACACTGGACAGAGAGCTAGTC | + |
Preference number: 2 (lower is better) Translates to: ADSQPLSMVSSEMEV*YQTSGGVTLDRELV Trigger: GACTAGCTCTCTGTCCAGTGTCACTCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGAAGAGACCATTGATAATGGCTGGCTGTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CAA 90 bp | CGTGTGCATGCATGTATGTGGTGTTTCACTCTCTGTAGCATAGGCTaGCCCTGCCTCTGCCTCCCAAACTTTGGGATGAAAAGGTGTTTA | + |
Preference number: 2 (lower is better) Translates to: RVHACMWCFTLCSIG*PCLCLPNFGMKRCL Trigger: TAAACACCTTTTCATCCCAAAGTTTGGGAGGCAGAGGCAGGGCAAGCCTATGCTACAGAGAGTGAAACACCACATACATGCATGCACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGACAGCGTCATCACCATaGATGACCTGTTCACTAAGA | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKTASSP*MTCSLR Trigger: TCTTAGTGAACAGGTCATTCATGGTGATGACGCTGT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGACAGTGGGTAAAGGCTaGCCAGCTTTCTGTCTGTCC | + |
Preference number: 2 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKTVGKG*PAFCLS Trigger: GGACAGACAGAAAGCTGGTCAGCCTTTACCCACTGT...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCAACCCTTCACTTCATaGTGTAGGAAACATTGTGTA | + |
Preference number: 2 (lower is better) Translates to: ELSEVLGACVALRPCRKLQPFTS*CRKHCV Trigger: TACACAATGTTTCCTACAGCATGAAGTGAAGGGTTG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGAAATGCAGTACCCAATaGCAGACATCTCCAATGTTT | + |
Preference number: 2 (lower is better) Translates to: ELSEVLGACVALRPCRKLKCSTQ*QTSPMF Trigger: AAACATTGGAGATGTCTGGCATTGGGTACTGCATTT...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGACCCAGATCCTCATCTaGTCCAGGAGCAAGTGTCAC | + |
Preference number: 2 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKTQILI*SRSKCH Trigger: GTGACACTTGCTCCTGGAGCAGATGAGGATCTGGGT...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | GAAGCTCTAAAACAGCCAAGCCTGTCTTGGTTGGCTTTGAAGAACCAACAGGACTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATC | + |
Preference number: 2 (lower is better) Translates to: EALKQPSLSWLALKNQQDCLKLQ*RQPAII Trigger: GATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCA...GTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGTTTTAGAGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CAA 90 bp | AGGTTGCTAGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTaGAGCAGCTGGAACCTAGGAGTGATTTTCAGCACAAACTACTGT | + |
Preference number: 2 (lower is better) Translates to: RLLGEEHGLPLQQVY*SSWNLGVIFSTNYC Trigger: ACAGTAGTTTGTGCTGAAAATCACTCCTAGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCTAGCAACCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTaGCACAAGGAGGTAGAACCCGGCACAAGTTTATTGCAGAGACAC | + |
Preference number: 2 (lower is better) Translates to: CQIKKEAQSPCIKYP*HKEVEPGTSLLQRH Trigger: GTGTCTCTGCAATAAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGCTTTCACTGCTTTTCTaGCTGCACCACCACCAACAA | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGLSLLF*LHHHQQ Trigger: TTGTTGGTGGTGGTGCAGTCAGAAAAGCAGTGAAAG...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGCTTTTACTTTACCATaGCCAAGGAAGCTGAACAGT | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKAFTLP*PRKLNS Trigger: ACTGTTCAGCTTCCTTGGGCATGGTAAAGTAAAAGC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTGCAAACTGCTTAGCCTaGCTAGCTTTCTCACCAACT | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFANCLA*LAFSPT Trigger: AGTTGGTGAGAAAGCTAGGCAGGCTAAGCAGTTTGC...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | CAAGTTTATTGCAGAGACACGGTGCACCTCTCCCACCCCTCGTGGTaGATGATAAAGGTGGTTATGAGAGGAAGTAAGAGTAGTTTGCAA | + |
Preference number: 2 (lower is better) Translates to: QVYCRDTVHLSHPSW*MIKVVMRGSKSSLQ Trigger: TTGCAAACTACTCTTACTTCCTCTCATAACCACCTTTATCATCAACCACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAATAAACTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTGTGACTTGGTTTCCTaGAGAAAGCAAGTTCAGTTA | + |
Preference number: 2 (lower is better) Translates to: SCSHDMECLVHFSTRGPKCDLVS*RKQVQL Trigger: TAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGACAGCGTCATCACCATaGATGACCTGTTCACTAAGA | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGTASSP*MTCSLR Trigger: TCTTAGTGAACAGGTCATTCATGGTGATGACGCTGT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACCACTGGGCAAAATGTaGCCAAGAACAGAAACCATT | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTPLGKM*PRTETI Trigger: AATGGTTTCTGTTCTTGGGCACATTTTGCCCAGTGG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAGACTAGAGAAATCCTaGAGGTGCTGCTTTGGAAAC | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGRLEKS*RCCFGN Trigger: GTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAAGGGAAAGCCAGTCTaGGAAGTTCCAAGCCTTTTC | + |
Preference number: 2 (lower is better) Translates to: LFTKKTREILQVLLWKHQKGKPV*EVPSLF Trigger: GAAAAGGCTTGGAACTTCCCAGACTGGCTTTCCCTT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | CAGCTTTCTGTCTGTCCCACCACACTACCTACCTTTAATTCTGTTTaGAAAGGGTTGTCAGATGCCTGGTATCTGTGGACTTTTCCTCAC | + |
Preference number: 2 (lower is better) Translates to: QLSVCPTTLPTFNSV*KGLSDAWYLWTFPH Trigger: GTGAGGAAAAGTCCACAGATACCAGGCATCTGACAACCCTTTCAAAACAGAATTAAAGGTAGGTAGTGTGGTGGGACAGACAGAAAGCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGTACGGTTTCTGGTTTaGATGACAAAGCAGATTCAG | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTVRFLV*MTKQIQ Trigger: CTGAATCTGCTTTGTCATTCAAACCAGAAACCGTAC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTAATGAGGATAAAAGTTaGATCCACTGGGCAAAATGT | + |
Preference number: 2 (lower is better) Translates to: RGGTWPSSPASIFEQLEPNEDKS*IHWAKC Trigger: ACATTTTGCCCAGTGGATGCAACTTTTATCCTCATT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTAAAAGTTGCATCCACTaGGCAAAATGTGCCCAAGAA | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFKSCIH*AKCAQE Trigger: TTCTTGGGCACATTTTGCCCAGTGGATGCAACTTTT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTACTCTTGTCATCACTTaGATGACAACTGTCTCCTGT | + |
Preference number: 2 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFTLVIT*MTTVSC Trigger: ACAGGAGACAGTTGTCATCCAAGTGATGACAAGAGT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAACTCTTGTCATCACTTaGATGACAACTGTCTCCTGT | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTTLVIT*MTTVSC Trigger: ACAGGAGACAGTTGTCATCCAAGTGATGACAAGAGT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATGTGACTTGGTTTCCTaGAGAAAGCAAGTTCAGTTA | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTCDLVS*RKQVQL Trigger: TAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACCCAGACTTTACATCTaGCTTTGCTTCAAAAGGTAT | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTPRLYI*LCFKRY Trigger: ATACCTTTTGAAGCAAAGTCAGATGTAAAGTCTGGG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGCTTTTACTTTACCATaGCCAAGGAAGCTGAACAGT | + |
Preference number: 2 (lower is better) Translates to: PLHLLSNASHSGPSANMEAFTLP*PRKLNS Trigger: ACTGTTCAGCTTCCTTGGGCATGGTAAAGTAAAAGC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | TTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCACTAAATTCTCTGAATaGAGTTCCCTCACCCCATAT | + |
Preference number: 2 (lower is better) Translates to: LKVTPVKLSCRAMYIPLSTKFSE*SSLTPY Trigger: ATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGT...GCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR CAA 90 bp | GTCTGTCCCACCACACTACCTACCTTTAATTCTGTTTTGAAAGGGTaGTCAGATGCCTGGTATCTGTGGACTTTTCCTCACTCAACATTA | + |
Preference number: 2 (lower is better) Translates to: VCPTTLPTFNSVLKG*SDAWYLWTFPHSTL Trigger: TAATGTTGAGTGAGGAAAAGTCCACAGATACCAGGCATCTGACAACCCTTTCAAAACAGAATTAAAGGTAGGTAGTGTGGTGGGACAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 90 bp | CCCTGCTCAGTGAAGCTGACACACTTGTATTGCATGAGACTGGATTaGAAAGTTACATATCAAAATGATGGCAGCACTGCATTCTGGACA | + |
Preference number: 2 (lower is better) Translates to: PCSVKLTHLYCMRLD*KVTYQNDGSTAFWT Trigger: TGTCCAGAATGCAGTGCTGCCATCATTTTGATATGTAACTTTCAAATCCAGTCTCATGCAATACAAGTGTGTCAGCTTCACTGAGCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 90 bp | CGATTTCTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTTGTaGAAATCGCTCTCTAGCGATAACCCACAGCTTGACTGCTTTGTT | + |
Preference number: 2 (lower is better) Translates to: RFLHSLLSINQICSL*KSLSSDNPQLDCFV Trigger: AACAAAGCAGTCAAGCTGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAGAAATCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
3UTR CAA 90 bp | CATCGATTTCTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGCGATAACCCACAGCTTGACTGCTTT | + |
Preference number: 2 (lower is better) Translates to: HRFLHSLLSINQICS*LKSLSSDNPQLDCF Trigger: AAAGCAGTCAAGCTGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAGAAATCGATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
3UTR-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAATGAGGATAAAAGTTaGATCCACTGGGCAAAATGT | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTNEDKS*IHWAKC Trigger: ACATTTTGCCCAGTGGATGCAACTTTTATCCTCATT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | GAAGCTCTAAAACAGCCAAGCCTGTCTTGGTTGGCTTTGAAGAACCAACAGGACCTGCGTTCCACAGCTTaGATAAAATCACTAAATTCT | + |
Preference number: 2 (lower is better) Translates to: EALKQPSLSWLALKNQQDLRSTA*IKSLNS Trigger: AGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAG...GTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGTTTTAGAGCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CAA 90 bp | CGATTTCTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTTGTaGAAATCGCTCTCTAGCGATAACCCACTGAAAACACAGACAACA | + |
Preference number: 2 (lower is better) Translates to: RFLHSLLSINQICSL*KSLSSDNPLKTQTT Trigger: TGTTGTCTGTGTTTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAGAAATCG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CAA 90 bp | CATCGATTTCTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGCGATAACCCACTGAAAACACAGACA | + |
Preference number: 2 (lower is better) Translates to: HRFLHSLLSINQICS*LKSLSSDNPLKTQT Trigger: TGTCTGTGTTTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAGAAATCGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAATCTTGATTACACATaGTTTCAAAGACATGCATCG | + |
Preference number: 2 (lower is better) Translates to: HSDGQSYAAQQYKRELKTNLDYT*FQRHAS Trigger: CGATGCATGTCTTTGAAAGCATGTGTAATCAAGATT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAATCTTGATTACACATaGTTTCAAAGACATGCATCG | + |
Preference number: 2 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGNLDYT*FQRHAS Trigger: CGATGCATGTCTTTGAAAGCATGTGTAATCAAGATT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CCA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCACTAAATTCTCTGAATaGAGTTCCCTCACCCCATAT | + |
Preference number: 2 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSTKFSE*SSLTPY Trigger: ATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGT...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR-3UTR CCA 90 bp | GAAATAACCCAACACATTAAAGTAGTTTGGGCTTCATTTACTCTATGTGAGCTACTACCTCCCCAGTGCTaGGAGAAAAGGCATGCAGTA | + |
Preference number: 2 (lower is better) Translates to: EITQHIKVVWASFTLCELLPPQC*EKRHAV Trigger: TACTGCATGCCTTTTCTCCCAGCACTGGGGAGGTAG...TAGCTCACATAGAGTAAATGAAGCCCAAACTACTTTAATGTGTTGGGTTATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CAA 90 bp | CCAGACATCTCCAATGTTTCTCTCCATGTGACTTCTGTGGGAATCTaGATTACACATGCTTTCAAAGACATGCATCGTCAACAAAAGCTA | + |
Preference number: 2 (lower is better) Translates to: PDISNVSLHVTSVGI*ITHAFKDMHRQQKL Trigger: TAGCTTTTGTTGACGATGCATGTCTTTGAAAGCATGTGTAATCAAGATTCCCACAGAAGTCACATGGAGAGAAACATTGGAGATGTCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 90 bp | AGCCTGTCTTGGTTGGCTTTGAAGAACCAACAGGACATAAGTTTTTaGCTTTGTGACATTCATCAAACACTATCACTCCATCGAAGTCGT | + |
Preference number: 2 (lower is better) Translates to: SLSWLALKNQQDISF*LCDIHQTLSLHRSR Trigger: ACGACTTCGATGGAGTGATAGTGTTTGATGAATGTCACAAAGCAAAAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR-3UTR TCA 90 bp | ATCAATCAAATCTGCAGCTTGTTGAAATCGCTCTCTAGCGATAACCCACTGAAAAAATCTGCAGCTTGTTaGAATCGCTCTCTAGCGATA | + |
Preference number: 2 (lower is better) Translates to: INQICSLLKSLSSDNPLKKSAAC*NRSLAI Trigger: TATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTT...TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGAT 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR-3UTR TCA 90 bp | GAAATAACCCAACACATTAAAGTAGTTTGGGCTTCATTTACTCTATGTGAGCTAGCAGGAAGACTGCTATaGGTTGATCCTACACAACGC | + |
Preference number: 2 (lower is better) Translates to: EITQHIKVVWASFTLCELAGRLL*VDPTQR Trigger: GCGTTGTGTAGGATCAACTCATAGCAGTCTTCCTGC...TAGCTCACATAGAGTAAATGAAGCCCAAACTACTTTAATGTGTTGGGTTATTTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR-3UTR GCA 90 bp | AACCCACAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCT | + |
Preference number: 2 (lower is better) Translates to: NPQLDCFVIHFHIALRKKPVKLS*RAMYIP Trigger: AGGAATGTACATTGCACGGCAGCTGAGCTTTACTGG...CTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTGTGGGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
3UTR-3UTR CCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGTTGCTCTGCATGAAATaGGTGTACATCATAATTAAC | + |
Preference number: 2 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKLLCMK*VYIIIN Trigger: GTTAATTATGATGTACACCCATTTCATGCAGAGCAA...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 90 bp | GAGGAGGAAATTTCTGAGGGAACAATCGGTGACAGACCCTCATTCTaGACTACTAACTTACAAAGACAGCCAAATGTAGACAATTTTCAA | + |
Preference number: 2 (lower is better) Translates to: EEEISEGTIGDRPSF*TTNLQRQPNVDNFQ Trigger: TTGAAAATTGTCTACATTTGGCTGTCTTTGTAAGTTAGTAGTCAAGAATGAGGGTCTGTCACCGATTGTTCCCTCAGAAATTTCCTCCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR GCA 90 bp | CAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGAACTTCTCATGTAGGCCATGTTaGGTGGTTCAGAAGCACCTA | + |
Preference number: 2 (lower is better) Translates to: QLDCFVIHFHIALRKKNFSCRPC*VVQKHL Trigger: TAGGTGCTTCTGAACCACGCAACATGGCCTACATGA...GAAGTTCTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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3UTR-3UTR GCA 90 bp | CAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGAACTTCCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCT | + |
Preference number: 2 (lower is better) Translates to: QLDCFVIHFHIALRKKNFPVKLS*RAMYIP Trigger: AGGAATGTACATTGCACGGCAGCTGAGCTTTACTGG...GAAGTTCTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
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3UTR-3UTR CCA 90 bp | AAATCGCTCTCTAGCGATAACCCACAGCTTGACTGCTTTGTTATACATTTTCACCTGCGTTCCACAGCTTaGATAAAATCACTAAATTCT | + |
Preference number: 2 (lower is better) Translates to: KSLSSDNPQLDCFVIHFHLRSTA*IKSLNS Trigger: AGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAG...GTGAAAATGTATAACAAAGCAGTCAAGCTGTGGGTTATCGCTAGAGAGCGATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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3UTR-3UTR CCA 90 bp | ATCAATCAAATCTGCAGCTTGTTGAAATCGCTCTCTAGCGATAACCCACTGAAACACTCCCATTGTGTTTaGAAGAAATCTTACCATATT | + |
Preference number: 2 (lower is better) Translates to: INQICSLLKSLSSDNPLKHSHCV*KKSYHI Trigger: AATATGGTAAGATTTCTTCCAAACACAATGGGAGTG...TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CCA 72 bp | CACTCGGGTCTGCTGCTCAGAGCTGCACCGCTCAAGTaGGAGAAGGCATCTCAGAGGCTAGGGAGACAGAGT | + |
Preference number: 3 (lower is better) Translates to: HSGLLLRAAPLK*EKASQRLGRQS Trigger: ACTCTGTCTCCCTAGCCTCTGAGATGCCTTCTCCCACTTGAGCGGTGCAGCTCTGAGCAGCAGACCCGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 72 bp | AAGGCCACACTAACTCTCCCCAGGAGACTGGCATGCTaGCTCAGTCCTGAGGGAGCCTCCAGTGCAAAAAGC | + |
Preference number: 3 (lower is better) Translates to: KATLTLPRRLAC*LSPEGASSAKS Trigger: GCTTTTTGCACTGGAGGCTCCCTCAGGACTGAGTCAGCATGCCAGTCTCCTGGGGAGAGTTAGTGTGGCCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCCTGCAGCACAGAGGTaGCTAGGGGAGGAACATGGC | + |
Preference number: 3 (lower is better) Translates to: SCSHDMECLVHFSTRGPKPAAQR*LGEEHG Trigger: GCCATGTTCCTCCCCTAGCAACCTCTGTGCTGCAGG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | CCTGCAAGGGTTTCCCATCCGGCAAACAGCAGGAGCTaGGGGACTGGAGCAGCCTCAACTGAAAGCAAGAAT | + |
Preference number: 3 (lower is better) Translates to: PARVSHPANSRS*GTGAASTESKN Trigger: ATTCTTGCTTTCAGTTGAGGCTGCTCCAGTCCCTCAGCTCCTGCTGTTTGCCGGATGGGAAACCCTTGCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 72 bp | CACCAACAATCTGACTGGAACAAGAGAGGGCAAGCCTaGAGCACAGAGGTTGCTAGGGGAGGAACATGGCCT | + |
Preference number: 3 (lower is better) Translates to: HQQSDWNKRGQA*STEVARGGTWP Trigger: AGGCCATGTTCCTCCCCTAGCAACCTCTGTGCTGCAGGCTTGCCCTCTCTTGTTCCAGTCAGATTGTTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 72 bp | CATGACTGCCAACGAGTGACTTTTGTAGGGGCAGAGTaGAGAGAGGCTGGGCACCAATTCCAGATGTCTCAC | + |
Preference number: 3 (lower is better) Translates to: HDCQRVTFVGAE*REAGHQFQMSH Trigger: GTGAGACATCTGGAATTGGTGCCCAGCCTCTCTGCACTCTGCCCCTACAAAAGTCACTCGTTGGCAGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR GCA 72 bp | TCTGAAAACACTGATGGAACCAACACTCGGGTCTGCTaGTCAGAGCTGCACCGCTCAAGTGGGAGAAGGCAT | + |
Preference number: 3 (lower is better) Translates to: SENTDGTNTRVC*SELHRSSGRRH Trigger: ATGCCTTCTCCCACTTGAGCGGTGCAGCTCTGAGCAGCAGACCCGAGTGTTGGTTCCATCAGTGTTTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 72 bp | CTTCAGGAAGGGGCTCAGTCAGACTCTAAGGCTACCTaGAAGGCTAAGGCAACTCCAAGTAACAGAGGCCAG | + |
Preference number: 3 (lower is better) Translates to: LQEGAQSDSKAT*KAKATPSNRGQ Trigger: CTGGCCTCTGTTACTTGGAGTTGCCTTAGCCTTCCAGGTAGCCTTAGAGTCTGACTGAGCCCCTTCCTGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CCA 72 bp | CAAGCCTGCAGCACAGAGGTTGCTAGGGGAGGAACATaGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTG | + |
Preference number: 3 (lower is better) Translates to: QACSTEVARGGT*PSSPASIFEQL Trigger: CAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCTAGCAACCTCTGTGCTGCAGGCTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR TCA 72 bp | AGTCACTGCAACAGCAGCAAGCTCCTACTAGACGCCTaGGTGGGGTCTGGGTTAAGAGGCCAGAATCAGAAA | + |
Preference number: 3 (lower is better) Translates to: SHCNSSKLLLDA*VGSGLRGQNQK Trigger: TTTCTGATTCTGGCCTCTTAACCCAGACCCCACTCAGGCGTCTAGTAGGAGCTTGCTGCTGTTGCAGTGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | TTCTCAACAGTCATCACTGAGGCCCAATTCAAATGCTaGTACACACAGCCACAGCCGGCCTGGAGCTTGCGA | + |
Preference number: 3 (lower is better) Translates to: FSTVITEAQFKC*YTQPQPAWSLR Trigger: TCGCAAGCTCCAGGCCGGCTGTGGCTGTGTGTATCAGCATTTGAATTGGGCCTCAGTGATGACTGTTGAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | AGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTaGAGGAAACTGAACCTACTTTACATGACAGTGGCT | + |
Preference number: 3 (lower is better) Translates to: SEVLGACVALRP*RKLNLLYMTVA Trigger: AGCCACTGTCATGTAAAGTAGGTTCAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CCA 72 bp | ACCAAAGTAAAAGCGCACAGGCAGCCTCAAGGAAGCTaGAGGAAAGACACGTGTCCCCTCTACTCTGTTTGC | + |
Preference number: 3 (lower is better) Translates to: TKVKAHRQPQGS*RKDTCPLYSVC Trigger: GCAAACAGAGTAGAGGGGACACGTGTCTTTCCTCCAGCTTCCTTGAGGCTGCCTGTGCGCTTTTACTTTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCCTGTGTTGTGTATGTaGTTCACCAGAGCCCACACC | + |
Preference number: 3 (lower is better) Translates to: SCSHDMECLVHFSTRGPKPVLCM*FTRAHT Trigger: GGTGTGGGCTCTGGTGAACAACATACACAACACAGG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | CTTTGGAAACTGTCCCTGATTTTTATGCAAGTAGTATaGTCTCACAGCACTCAGCACCGCCTGTGCACGCCG | + |
Preference number: 3 (lower is better) Translates to: LWKLSLIFMQVV*SHSTQHRLCTP Trigger: CGGCGTGCACAGGCGGTGCTGAGTGCTGTGAGAGCATACTACTTGCATAAAAATCAGGGACAGTTTCCAAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | AGCTGGAGGAAAGACACGTGTCCCCTCTACTCTGTTTaGGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGT | + |
Preference number: 3 (lower is better) Translates to: SWRKDTCPLYSV*AISFAAFFQVC Trigger: ACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGGACACGTGTCTTTCCTCCAGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | GAGCCAGGAATGGTTCAAGCTTCTTTACCTCTTCAGTaGCCCAGTCACTGCAACAGCAGCAAGCTCCTACTA | + |
Preference number: 3 (lower is better) Translates to: EPGMVQASLPLQ*PSHCNSSKLLL Trigger: TAGTAGGAGCTTGCTGCTGTTGCAGTGACTGGGGCACTGAAGAGGTAAAGAAGCTTGAACCATTCCTGGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | CTTACCTTCCCGTTCTTGATCTCTTCCCGAGCCAGCTaGACCACCCTTTTCACTTTGGATGCTATACACAGG | + |
Preference number: 3 (lower is better) Translates to: LTFPFLISSRAS*TTLFTLDAIHR Trigger: CCTGTGTATAGCATCCAAAGTGAAAAGGGTGGTGCAGCTGGCTCGGGAAGAGATCAAGAACGGGAAGGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR GCA 72 bp | TTGCTGGGCCGCATAGGTAACTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATCAATGGTCTCTTCAGA | + |
Preference number: 3 (lower is better) Translates to: LLGRIGNCLKLQ*RQPAIINGLFR Trigger: TCTGAAGAGACCATTGATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCAGTTACCTATGCGGCCCAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | GGAACACACGGGATAAATCGAATTCTACCTCCCCAGTaGTGGGAGAAAAGGCATGCAGTACCACTGTCTGGT | + |
Preference number: 3 (lower is better) Translates to: GTHGINRILPPQ*WEKRHAVPLSG Trigger: ACCAGACAGTGGTACTGCATGCCTTTTCTCCCAGCACTGGGGAGGTAGAATTCGATTTATCCCGTGTGTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | AATGCTGATACACACAGCCACAGCCGGCCTGGAGCTTaGGATCCTCTAGTGTCTATCTCTCATGTGCTAGAA | + |
Preference number: 3 (lower is better) Translates to: NADTHSHSRPGA*DPLVSISHVLE Trigger: TTCTAGCACATGAGAGATAGACACTAGAGGATCGCAAGCTCCAGGCCGGCTGTGGCTGTGTGTATCAGCATT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CCA 72 bp | TCTGTCTACTCAGCTGCAGCCATGACATGGAATGCTTaGTTCACTTCAGCACTAGAGGGCCAAAGTGCCTGT | + |
Preference number: 3 (lower is better) Translates to: SVYSAAAMTWNA*FTSALEGQSAC Trigger: ACAGGCACTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGTCCCCTCTACTCTGTTaGCGCCATCAGCTTTGCTGC | + |
Preference number: 3 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKSPLLC*RHQLCC Trigger: GCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGGA...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | CTCAGCATCTCTGCTTATAGCTTATCCAGCCAGAAATaGGCCCCCAAAACTGAACCTGCCTTGTGTGCTCGT | + |
Preference number: 3 (lower is better) Translates to: LSISAYSLSSQK*APKTEPALCAR Trigger: ACGAGCACACAAGGCAGGTTCAGTTTTGGGGGCTCATTTCTGGCTGGATAAGCTATAAGCAGAGATGCTGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | GAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTaGCTGTGTTGTGTATGTTGTTCACCAGAGCCCACA | + |
Preference number: 3 (lower is better) Translates to: ECLVHFSTRGPK*LCCVCCSPEPT Trigger: TGTGGGCTCTGGTGAACAACATACACAACACAGGCACTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | GAAGAGAAGATGGGCACGGAGAAGACTGCACCTGCTTaGACCTCCCTGTTTCTTTCCCTTATAGGACTCATT | + |
Preference number: 3 (lower is better) Translates to: EEKMGTEKTAPA*TSLFLSLIGLI Trigger: AATGAGTCCTATAAGGGAAAGAAACAGGGAGGTGCAAGCAGGTGCAGTCTTCTCCGTGCCCATCTTCTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | CATAGAAGAGAAGATGGGCACGGAGAAGACTGCACCTaGTTGCACCTCCCTGTTTCTTTCCCTTATAGGACT | + |
Preference number: 3 (lower is better) Translates to: HRREDGHGEDCT*LHLPVSFPYRT Trigger: AGTCCTATAAGGGAAAGAAACAGGGAGGTGCAAGCAGGTGCAGTCTTCTCCGTGCCCATCTTCTCTTCTATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | ATGTGGTGTTTCACTCTCTGTAGCATAGGCTTGCCCTaGCTCTGCCTCCCAAACTTTGGGATGAAAAGGTGT | + |
Preference number: 3 (lower is better) Translates to: MWCFTLCSIGLP*LCLPNFGMKRC Trigger: ACACCTTTTCATCCCAAAGTTTGGGAGGCAGAGGCAGGGCAAGCCTATGCTACAGAGAGTGAAACACCACAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CCA 72 bp | TATTGCAGAGACACGGTGCACCTCTCCCACCCCTCGTaGTTGATGATAAAGGTGGTTATGAGAGGAAGTAAG | + |
Preference number: 3 (lower is better) Translates to: YCRDTVHLSHPS*LMIKVVMRGSK Trigger: CTTACTTCCTCTCATAACCACCTTTATCATCAACCACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTATCCCCTCTACTCTGTTaGCGCCATCAGCTTTGCTGC | + |
Preference number: 3 (lower is better) Translates to: KATNEPECMARNPSLHAVSPLLC*RHQLCC Trigger: GCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGGA...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGGAAACCATTCACCATTaGTTCTTTGAGGCACTAAGA | + |
Preference number: 3 (lower is better) Translates to: ELSEVLGACVALRPCRKLETIHH*FFEALR Trigger: TCTTAGTGCCTCAAAGAACAAATGGTGAATGGTTTC...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGCCTGTGTTGTGTATGTaGTTCACCAGAGCCCACACC | + |
Preference number: 3 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKPVLCM*FTRAHT Trigger: GGTGTGGGCTCTGGTGAACAACATACACAACACAGG...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | AATTTCTGTCTACTCAGCTGCAGCCATGACATGGAATaGTTGGTTCACTTCAGCACTAGAGGGCCAAAGTGC | + |
Preference number: 3 (lower is better) Translates to: NFCLLSCSHDME*LVHFSTRGPKC Trigger: GCACTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | GTCAGAGATATCCAACTCCTTATACACACTGTAACGTaGAGCCAGGCTATGAGCTACTGTCTACCTGCAAGG | + |
Preference number: 3 (lower is better) Translates to: VRDIQLLIHTVT*SQAMSYCLPAR Trigger: CCTTGCAGGTAGACAGTAGCTCATAGCCTGGCTGCACGTTACAGTGTGTATAAGGAGTTGGATATCTCTGAC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | AACAGCGTGCACTCTTCATTCAGATGGACAGTCCTATaGAGCGCAGCAGTACAAAAGGGAACTGAAGACAGA | + |
Preference number: 3 (lower is better) Translates to: NSVHSSFRWTVL*SAAVQKGTEDR Trigger: TCTGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATGAAGAGTGCACGCTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CCA 72 bp | TGCATAAACACATATCCACACACAGAACGAGGGGGCTaGCACCTTAGGACACAGAATCGTTCTCATTCCTCA | + |
Preference number: 3 (lower is better) Translates to: CINTYPHTERGG*HLRTQNRSHSS Trigger: TGAGGAATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGATATGTGTTTATGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CCA 72 bp | AGGTCACCTATATCTCAGGGACCAGAGGAAGGAAGTTaGTGTGAGGAGGAAATTTCTGAGGGAACAATCGGT | + |
Preference number: 3 (lower is better) Translates to: RSPISQGPEEGS*CEEEISEGTIG Trigger: ACCGATTGTTCCCTCAGAAATTTCCTCCTCACACCAACTTCCTTCCTCTGGTCCCTGAGATATAGGTGACCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CCA 72 bp | ACACACGGGATAAATCGAATTCTACCTCCCCAGTGCTaGGAGAAAAGGCATGCAGTACCACTGTCTGGTTTA | + |
Preference number: 3 (lower is better) Translates to: THGINRILPPQC*EKRHAVPLSGL Trigger: TAAACCAGACAGTGGTACTGCATGCCTTTTCTCCCAGCACTGGGGAGGTAGAATTCGATTTATCCCGTGTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGCCAAAGTGCCTGTGTaGTGTATGTTGTTCACCAGA | + |
Preference number: 3 (lower is better) Translates to: HSDGQSYAAQQYKRELKTAKVPV*CMLFTR Trigger: TCTGGTGAACAACATACACAACACAGGCACTTTGGC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGACCTTTAATTCTGTTTaGAAAGGGTTGTCAGATGCC | + |
Preference number: 3 (lower is better) Translates to: SCSHDMECLVHFSTRGPKTFNSV*KGLSDA Trigger: GGCATCTGACAACCCTTTCAAAACAGAATTAAAGGT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | GAAGCTCTAAAACAGCCAAGCCTGTCTTGGTTGGCTTTGAAGAACCAACAGGACTCAGAGATGGAGGTTTaGTACCAAACATCAGGAGGA | + |
Preference number: 3 (lower is better) Translates to: EALKQPSLSWLALKNQQDSEMEV*YQTSGG Trigger: TCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGA...GTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGTTTTAGAGCTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR TCA 72 bp | TTCTATTCTCAGGGGCCACAAAGGGGGACTGCTTGCTaGTCACTGCCTGAGATACAAGGAATGAGGATAAAA | + |
Preference number: 3 (lower is better) Translates to: FYSQGPQRGTAC*SLPEIQGMRIK Trigger: TTTTATCCTCATTCCTTGTATCTCAGGCAGTGATCAGCAAGCAGTCCCCCTTTGTGGCCCCTGAGAATAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | CAAAGACTATCTCAGCAAAGCCAAAACAAAAGGCTATaGATCCCAGGCAGGGCAGCTCACACCTTTAAGCTC | + |
Preference number: 3 (lower is better) Translates to: QRLSQQSQNKRL*IPGRAAHTFKL Trigger: GAGCTTAAAGGTGTGAGCTGCCCTGCCTGGGATTCATAGCCTTTTGTTTTGGCTTTGCTGAGATAGTCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | CAGATCTCTAGGGTTTCAGAACAGCCAGGGATATTATaGAAAGTCCTTGTCTGCCTCCAATCCCCAGAAAGA | + |
Preference number: 3 (lower is better) Translates to: QISRVSEQPGIL*KVLVCLQSPER Trigger: TCTTTCTGGGGATTGGAGGCAGACAAGGACTTTGCATAATATCCCTGGCTGTTCTGAAACCCTAGAGATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CCA 72 bp | CAAAGAATTTCTGTCTACTCAGCTGCAGCCATGACATaGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAA | + |
Preference number: 3 (lower is better) Translates to: QRISVYSAAAMT*NAWFTSALEGQ Trigger: TTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGAAATTCTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGTCTGTTTTGAAAGGGTaGTCAGATGCCTGGTATCTG | + |
Preference number: 3 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKSVLKG*SDAWYL Trigger: CAGATACCAGGCATCTGACAACCCTTTCAAAACAGA...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | TTCCTCAGGCTTTTACTTTACCATGCCCAAGGAAGCTaGACAGTCTGCTACTTCAAACACAGAAGCTCAGAG | + |
Preference number: 3 (lower is better) Translates to: FLRLLLYHAQGS*TVCYFKHRSSE Trigger: CTCTGAGCTTCTGTGTTTGAAGTAGCAGACTGTTCAGCTTCCTTGGGCATGGTAAAGTAAAAGCCTGAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | GTAGCTTCCACAGTAGGACTCTTGTCATCACTTGGATaGCAACTGTCTCCTGTCAGGTACTATAAGCTCATC | + |
Preference number: 3 (lower is better) Translates to: VASTVGLLSSLG*QLSPVRYYKLI Trigger: GATGAGCTTATAGTACCTGACAGGAGACAGTTGTCATCCAAGTGATGACAAGAGTCCTACTGTGGAAGCTAC 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | CATGCATCGTCAACAAAAGCTACAAATGAACCTGAATaGATGGCACGCAACCCTTCACTTCATGCTGTAGGA | + |
Preference number: 3 (lower is better) Translates to: HASSTKATNEPE*MARNPSLHAVG Trigger: TCCTACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTTTGTTGACGATGCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | AGGATCGAGCATTTCTACTTGTGGGCAAATGAACCCTaGTCAGTGAAGCTGACACACTTGTATTGCATGAGA | + |
Preference number: 3 (lower is better) Translates to: RIEHFYLWANEP*SVKLTHLYCMR Trigger: TCTCATGCAATACAAGTGTGTCAGCTTCACTGAGCAGGGTTCATTTGCCCACAAGTAGAAATGCTCGATCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CCA 72 bp | CATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTaGAACCTAGGAGTGATTTTCAGCACAAACTACTGT | + |
Preference number: 3 (lower is better) Translates to: HGLPLQQVYLSS*NLGVIFSTNYC Trigger: ACAGTAGTTTGTGCTGAAAATCACTCCTAGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAACCTCACCCAGCTCTTaGAGAAGATTAAAAAGCTAC | + |
Preference number: 3 (lower is better) Translates to: PLHLLSNASHSGPSANMETSPSS*RRLKSY Trigger: GTAGCTTTTTAATCTTCTCAAAGAGCTGGGTGAGGT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGAAACCATTCACCATTaGTTCTTTGAGGCACTAAGA | + |
Preference number: 3 (lower is better) Translates to: HSDGQSYAAQQYKRELKTETIHH*FFEALR Trigger: TCTTAGTGCCTCAAAGAACAAATGGTGAATGGTTTC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | CCTACTACTTGTGATACTAAGGCAGGAAGACTGCTATaGGTTGATCCTACACAACGCACCAAATACCAAACC | + |
Preference number: 3 (lower is better) Translates to: PTTCDTKAGRLL*VDPTQRTKYQT Trigger: GGTTTGGTATTTGGTGCGTTGTGTAGGATCAACTCATAGCAGTCTTCCTGCCTTAGTATCACAAGTAGTAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | AGGGATTTTCATGCAAAGAATTTCTGTCTACTCAGCTaGAGCCATGACATGGAATGCTTGGTTCACTTCAGC | + |
Preference number: 3 (lower is better) Translates to: RDFHAKNFCLLS*SHDMECLVHFS Trigger: GCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGAAATTCTTTGCATGAAAATCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | TCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCTCTAAGCTTCATATCC | + |
Preference number: 3 (lower is better) Translates to: SSILKVTPVKLS*RAMYIPLSFIS Trigger: GGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR-3UTR CAA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTACTTCTGTGGGAATCTaGATTACACATGCTTTCAAA | + |
Preference number: 3 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFTSVGI*ITHAFK Trigger: TTTGAAAGCATGTGTAATCAAGATTCCCACAGAAGT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | GTCTCTTCAGAGATGGAGGTTTTGTACCAAACATCAGGAGGAGTGACACTGGACCATTTTCACATAGCTTaGAGAAAGAAGAACTTCCTC | + |
Preference number: 3 (lower is better) Translates to: VSSEMEVLYQTSGGVTLDHFHIA*RKKNFL Trigger: GAGGAAGTTCTTCTTTCTCAAAGCTATGTGAAAATG...GTCCAGTGTCACTCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGAAGAGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR TCA 72 bp | TTTTACAGCAAACTAAATCCTAGAAACTTGAGAGAATaGGAGCCCAAGCGCTCCATCAAGTCTCTGCCACTA | + |
Preference number: 3 (lower is better) Translates to: FYSKLNPRNLRE*EPKRSIKSLPL Trigger: TAGTGGCAGAGACTTGATGGAGCGCTTGGGCTCTCATTCTCTCAAGTTTCTAGGATTTAGTTTGCTGTAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | CTGCAGGAAACTGAACCTACTTTACATGACAGTGGCTaGAAAAGACATGACTGCCAACGAGTGACTTTTGTA | + |
Preference number: 3 (lower is better) Translates to: LQETEPTLHDSG*KRHDCQRVTFV Trigger: TACAAAAGTCACTCGTTGGCAGTCATGTCTTTTTCAGCCACTGTCATGTAAAGTAGGTTCAGTTTCCTGCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | AAACAGATTACGGACGTTTGTTGTAAAGTAAATCTCTaGCTGTCACCTGTGGGGTCAGAGATATCCAACTCC | + |
Preference number: 3 (lower is better) Translates to: KQITDVCCKVNL*LSPVGSEISNS Trigger: GGAGTTGGATATCTCTGACCCCACAGGTGACAGTCAGAGATTTACTTTACAACAAACGTCCGTAATCTGTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | AATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTaGAATGTACATTCCTCTAAGCTTCATATCCATAGC | + |
Preference number: 3 (lower is better) Translates to: NFEGHSSKAQLP*NVHSSKLHIHS Trigger: GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR CCA 72 bp | ATGCCCCAACTAACTGAACATTCAATGTGTGGATCCTaGCTTAATAGCAGCTTTTCTGAAGCTCCATTCCTA | + |
Preference number: 3 (lower is better) Translates to: MPQLTEHSMCGS*LNSSFSEAPFL Trigger: TAGGAATGGAGCTTCAGAAAAGCTGCTATTAAGCCAGGATCCACACATTGAATGTTCAGTTAGTTGGGGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGACTTCTGTGGGAATCTaGATTACACATGCTTTCAAA | + |
Preference number: 3 (lower is better) Translates to: LFTKKTREILQVLLWKHQTSVGI*ITHAFK Trigger: TTTGAAAGCATGTGTAATCAAGATTCCCACAGAAGT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCTCTGCGTTCCACAGCTaGGATAAAATCACTAAATTC | + |
Preference number: 3 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSSAFHS*DKITKF Trigger: GAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGA...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR TCA 72 bp | TTAGGACACAGAATCGTTCTCATTCCTCATCCTCTGTaGCTTGGTTTCCTGAAGAAAGCAAGTTCAGTTACA | + |
Preference number: 3 (lower is better) Translates to: LGHRIVLIPHPL*LGFLKKASSVT Trigger: TGTAACTGAACTTGCTTTCTTCAGGAAACCAAGTCACAGAGGATGAGGAATGAGAACGATTCTGTGTCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR TCA 72 bp | TGTTATACCATGCCTAAATTTCTCAACAGTCATCACTaGGGCCCAATTCAAATGCTGATACACACAGCCACA | + |
Preference number: 3 (lower is better) Translates to: CYTMPKFLNSHH*GPIQMLIHTAT Trigger: TGTGGCTGTGTGTATCAGCATTTGAATTGGGCCTCAGTGATGACTGTTGAGAAATTTAGGCATGGTATAACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | TGCAAAAAGCAGCCTCCATTCCATCTCCTCTTGCTCTaGATGAAATGGGTGTACATCATAATTAACTGTTTG | + |
Preference number: 3 (lower is better) Translates to: CKKQPPFHLLLL*MKWVYIIINCL Trigger: CAAACAGTTAATTATGATGTACACCCATTTCATGCAGAGCAAGAGGAGATGGAATGGAGGCTGCTTTTTGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | TCAGAACAGCCAGGGATATTATGCAAAGTCCTTGTCTaGCTCCAATCCCCAGAAAGAAAACACAATAAATGT | + |
Preference number: 3 (lower is better) Translates to: SEQPGILCKVLV*LQSPERKHNKC Trigger: ACATTTATTGTGTTTTCTTTCTGGGGATTGGAGGCAGACAAGGACTTTGCATAATATCCCTGGCTGTTCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR CCA 72 bp | ATTTGTTCTGAAGCTCTAAAACAGCCAAGCCTGTCTTaGTTGGCTTTGAAGAACCAACAGGACATAAGTTTT | + |
Preference number: 3 (lower is better) Translates to: ICSEALKQPSLS*LALKNQQDISF Trigger: AAAACTTATGTCCTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGTTTTAGAGCTTCAGAACAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
3UTR GCA 72 bp | TGCAATTTAGTAGTAAAGAGAGCAAACTGCTTAGCCTaGCTAGCTTTCTCACCAACTTGCATTTATAGAAAT | + |
Preference number: 3 (lower is better) Translates to: CNLVVKRANCLA*LAFSPTCIYRN Trigger: ATTTCTATAAATGCAAGTTGGTGAGAAAGCTAGGCAGGCTAAGCAGTTTGCTCTCTTTACTACTAAATTGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR GCA 72 bp | CAAACAAAAGACTATAATAGTCAAACAGTAGTGGTATaGACATTTAATCCCAGCACACAGGAATCAGAGGAA | + |
Preference number: 3 (lower is better) Translates to: QTKDYNSQTVVV*TFNPSTQESEE Trigger: TTCCTCTGATTCCTGTGTGCTGGGATTAAATGTGCATACCACTACTGTTTGACTATTATAGTCTTTTGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CCA 72 bp | ACCTTTAATTCTGTTTTGAAAGGGTTGTCAGATGCCTaGTATCTGTGGACTTTTCCTCACTCAACATTAAAA | + |
Preference number: 3 (lower is better) Translates to: TFNSVLKGLSDA*YLWTFPHSTLK Trigger: TTTTAATGTTGAGTGAGGAAAAGTCCACAGATACCAGGCATCTGACAACCCTTTCAAAACAGAATTAAAGGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR-3UTR CAA 90 bp | GAAATAACCCAACACATTAAAGTAGTTTGGGCTTCATTTACTCTATGTGAGCTATCTGCGTTCCACAGCTaGGATAAAATCACTAAATTC | + |
Preference number: 3 (lower is better) Translates to: EITQHIKVVWASFTLCELSAFHS*DKITKF Trigger: GAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGA...TAGCTCACATAGAGTAAATGAAGCCCAAACTACTTTAATGTGTTGGGTTATTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR TCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACGCAGTTGCAACTGGCTaGGCAATATTGGCGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDAVATG*AILAGG Trigger: GCCACCCGCCAATATTGCTCAGCCAGTTGCAACTGC...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 72 bp | ACTGGAACAAGAGAGGGCAAGCCTGCAGCACAGAGGTaGCTAGGGGAGGAACATGGCCTTCCTCTCCAGCAA | + |
Preference number: 4 (lower is better) Translates to: TGTREGKPAAQR*LGEEHGLPLQQ Trigger: TTGCTGGAGAGGAAGGCCATGTTCCTCCCCTAGCAACCTCTGTGCTGCAGGCTTGCCCTCTCTTGTTCCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 72 bp | CCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTATaGCAGAGACACGGTGCACCTCTCCCACCCCTCGTG | + |
Preference number: 4 (lower is better) Translates to: PLHKEVEPGTSL*QRHGAPLPPLV Trigger: CACGAGGGGTGGGAGAGGTGCACCGTGTCTCTGCAATAAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTGCACTGCGAGCTGCTaGGACTGGTCTGAAGTTGAC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDCTASC*DWSEVD Trigger: GTCAACTTCAGACCAGTCTCAGCAGCTCGCAGTGCA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGGTAGGCCATGTTGCGTaGTTCAGAAGCACCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLVGHVA*FRSTSG Trigger: GCCACTGGTGCTTCTGAACCACGCAACATGGCCTAC...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CCTTTACCCACACCAGCACCATCGCCTATTAAGAAGCCAGCACGGTCTCCATTACTGAACCTGGTCTTTTaGAGGAGCAGCGGGCATGGC | + |
Preference number: 4 (lower is better) Translates to: PLPTPAPSPIKKPARSPLLNLVF*RSSGHG Trigger: GCCATGCCCGCTGCTCCTTCAAAAGACCAGGTTCAG...TAATGGAGACCGTGCTGGCTTCTTAATAGGCGATGGTGCTGGTGTGGGTAAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGGTGGATGGAGGCTGCTaGCTCACATTTAACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLVDGGC*LTFNSA Trigger: CGCACTGTTAAATGTGAGGCAGCAGCCTCCATCCAC...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCTCTGCGTAGGTCTCTaGATGACCCATTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLLCVGL*MTHFFL Trigger: GAGGAAGAAATGGGTCATGCAGAGACCTACGCAGAG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGAGGCGAGATGACTGGTaGAGAGGAGAAACTAGGCCG | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKRRDDW*RGETRP Trigger: CGGCCTAGTTTCTCCTCTGCACCAGTCATCTCGCCT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTGCCCAAATCTTGGTTaGTTCCTCCCAGGACATTCC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDCPNLG*FLPGHS Trigger: GGAATGTCCTGGGAGGAAGCAACCAAGATTTGGGCA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGTAGGCCATGTTGCGTaGTTCAGAAGCACCAGTGGC | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKVGHVA*FRSTSG Trigger: GCCACTGGTGCTTCTGAACCACGCAACATGGCCTAC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACTGAACCTGGTCTTTTaGAGGAGCAGCGGGCATGGC | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLLNLVF*RSSGHG Trigger: GCCATGCCCGCTGCTCCTTCAAAAGACCAGGTTCAG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGCAGTTGCAACTGGCTaGGCAATATTGGCGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTAVATG*AILAGG Trigger: GCCACCCGCCAATATTGCTCAGCCAGTTGCAACTGC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACGTAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAA | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDVVWRW*YHRRIQ Trigger: TTGGATTCTCCTATGGTATCACCACCTCCAGACTAC...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTTCACATTTGTGCCGCTaGCAGAGGCCAGAACACCTT | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLISHLCR*QRPEHL Trigger: AAGGTGTTCTGGCCTCTGTCAGCGGCACAAATGTGA...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTCACATTTGTGCCGCTaGCAGAGGCCAGAACACCTT | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKSHLCR*QRPEHL Trigger: AAGGTGTTCTGGCCTCTGTCAGCGGCACAAATGTGA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTGGTTGCTCAAGTTGGTaGTGCTCTGTGGGTGATGCT | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPGCSSW*CSVGDA Trigger: AGCATCACCCACAGAGCATCACCAACTTGAGCAACC...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGTGGATGGAGGCTGCTaGCTCACATTTAACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKVDGGC*LTFNSA Trigger: CGCACTGTTAAATGTGAGGCAGCAGCCTCCATCCAC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTGTAACTGCCTCAAGCTaGAATGCAGACAGCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIVTASS*NADSQP Trigger: TGGCTGGCTGTCTGCATTGCAGCTTGAGGCAGTTAC...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTTCTTCCCGAGCCAGCTaGACCACCCTTTTCACTTTG | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLISSRAS*TTLFTL Trigger: CAAAGTGAAAAGGGTGGTGCAGCTGGCTCGGGAAGA...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGGTCACCATGTGTAAGTaGCCCCAAACTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLVTMCK*PQTLKS Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGAC...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGAAGCTGCAGTTGCAACTaGCTGAGCAATATTGGCGGG | + |
Preference number: 4 (lower is better) Translates to: SLTPYSKTVHVGHVAWFRSCSCN*LSNIGG Trigger: CCCGCCAATATTGCTCAGCCAGTTGCAACTGCAGCT...TCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGCTCTGCCCAAATCTTaGTTGCTTCCTCCCAGGACA | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKALPKS*LLPPRT Trigger: TGTCCTGGGAGGAAGCAACCAAGATTTGGGCAGAGC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGGTGTTTTTCAATCAGTaGCTGCAATACCCCTTTGGC | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLVFFNQ*LQYPFG Trigger: GCCAAAGGGGTATTGCAGTCACTGATTGAAAAACAC...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACAGAGCTGCTTCCTGTaGGGCCACCAACTTTTCGTG | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLQSCFL*GHQLFV Trigger: CACGAAAAGTTGGTGGCCTCACAGGAAGCAGCTCTG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATGCACTGCGAGCTGCTaGGACTGGTCTGAAGTTGAC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTCTASC*DWSEVD Trigger: GTCAACTTCAGACCAGTCTCAGCAGCTCGCAGTGCA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATC | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKCLKLQ*RQPAII Trigger: GATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAGGCGAGATGACTGGTaGAGAGGAGAAACTAGGCCG | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTRRDDW*RGETRP Trigger: CGGCCTAGTTTCTCCTCTGCACCAGTCATCTCGCCT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTAAACCTACAATCCGCTaGCCATCTTCGGTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIKPTIR*PSSVLS Trigger: GCTAAGGACCGAAGATGGGCAGCGGATTGTAGGTTT...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCTGTTTTTGTTGCACTaGGAGCTGCTGAGACTGGTC | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPLFLLH*ELLRLV Trigger: GACCAGTCTCAGCAGCTCGCAGTGCAACAAAAACAG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TTCTCTGAATGGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATAAGGAGCAGCGGGCATaGCATTTCGTACTGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: FSEWSSLTPYSKTVHVGHKEQRA*HFVLLV Trigger: CACCAGCAGTACGAAATGCCATGCCCGCTGCTCCTT...ATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTCAGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAAGGAGCAGCGGGCATaGCATTTCGTACTGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGKEQRA*HFVLLV Trigger: CACCAGCAGTACGAAATGCCATGCCCGCTGCTCCTT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGAGCAATATTGGCGGGTaGCTTCAGTTTCATGAGTTC | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLSNIGG*LQFHEF Trigger: GAACTCATGAAACTGAAGCCACCCGCCAATATTGCT...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTGTAAAAGCCATCATCTaGTCCAGTCAGCTCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPVKAII*SSQLCP Trigger: TGGGCAGAGCTGACTGGACCAGATGATGGCTTTTAC...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | AAGCTGGAGGAAAGACACGTGTCCCCTCTACTCTGTTaGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTG | + |
Preference number: 4 (lower is better) Translates to: KLEERHVSPLLC*RHQLCCLFPGL Trigger: CAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGGGGACACGTGTCTTTCCTCCAGCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | TTCTGTCTACTCAGCTGCAGCCATGACATGGAATGCTaGGTTCACTTCAGCACTAGAGGGCCAAAGTGCCTG | + |
Preference number: 4 (lower is better) Translates to: FCLLSCSHDMEC*VHFSTRGPKCL Trigger: CAGGCACTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCTGAGTAGACAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGCAGAGCTGCTTCCTGTaGGGCCACCAACTTTTCGTG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQQSCFL*GHQLFV Trigger: CACGAAAAGTTGGTGGCCTCACAGGAAGCAGCTCTG...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGGTTGCTCAAGTTGGTaGTGCTCTGTGGGTGATGCT | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTGCSSW*CSVGDA Trigger: AGCATCACCCACAGAGCATCACCAACTTGAGCAACC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGATCAGTAGCTGCAGTTaGAACTGGCTGAGCAATATT | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLISSCS*NWLSNI Trigger: AATATTGCTCAGCCAGTTGCAACTGCAGCTACTGAT...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCT | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPPVKLS*RAMYIP Trigger: AGGAATGTACATTGCACGGCAGCTGAGCTTTACTGG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATCTTCCCGAGCCAGCTaGACCACCCTTTTCACTTTG | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTSSRAS*TTLFTL Trigger: CAAAGTGAAAAGGGTGGTGCAGCTGGCTCGGGAAGA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTGCAGTAAGTGTGTCTaGAAAATACTGAAACAGCGC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDCSKCV*KILKQR Trigger: GCGCTGTTTCAGTATTTTGCAGACACACTTACTGCA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTAAACGTTGTAGTGGATaGAGGCTGCTGCCTCACATT | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPKRCSG*RLLPHI Trigger: AATGTGAGGCAGCAGCCTCCATCCACTACAACGTTT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAAGGAGCAGCGGGCATaGCATTTCGTACTGCTGGTG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQKEQRA*HFVLLV Trigger: CACCAGCAGTACGAAATGCCATGCCCGCTGCTCCTT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAGCTGCAGTTGCAACTaGCTGAGCAATATTGGCGGG | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTSCSCN*LSNIGG Trigger: CCCGCCAATATTGCTCAGCCAGTTGCAACTGCAGCT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAAGTTTCTTCCTGTCTaGAGCAGGGAAGTGTTTTTC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDKFLPV*SREVFF Trigger: GAAAAACACTTCCCTGCTCCAGACAGGAAGAAACTT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGCTCTGCCCAAATCTTaGTTGCTTCCTCCCAGGACA | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTALPKS*LLPPRT Trigger: TGTCCTGGGAGGAAGCAACCAAGATTTGGGCAGAGC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | GGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTaGAGCAGCTGGAACCTAGGAGTGATTTTCAGCACA | + |
Preference number: 4 (lower is better) Translates to: GEEHGLPLQQVY*SSWNLGVIFST Trigger: TGTGCTGAAAATCACTCCTAGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | AGAAGAGAAGATGGGCACGGAGAAGACTGCACCTGCTaGCACCTCCCTGTTTCTTTCCCTTATAGGACTCAT | + |
Preference number: 4 (lower is better) Translates to: RREDGHGEDCTC*HLPVSFPYRTH Trigger: ATGAGTCCTATAAGGGAAAGAAACAGGGAGGTGCAAGCAGGTGCAGTCTTCTCCGTGCCCATCTTCTCTTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | GCATGTATGTGGTGTTTCACTCTCTGTAGCATAGGCTaGCCCTGCCTCTGCCTCCCAAACTTTGGGATGAAA | + |
Preference number: 4 (lower is better) Translates to: ACMWCFTLCSIG*PCLCLPNFGMK Trigger: TTTCATCCCAAAGTTTGGGAGGCAGAGGCAGGGCAAGCCTATGCTACAGAGAGTGAAACACCACATACATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR TCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAGTAAATCCTTTAGCTaGACCTGGTCTTTTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDSKSFS*TWSFEG Trigger: TCCTTCAAAAGACCAGGTTCAGCTAAAGGATTTACT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGAGTAAATCCTTTAGCTaGACCTGGTCTTTTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLSKSFS*TWSFEG Trigger: TCCTTCAAAAGACCAGGTTCAGCTAAAGGATTTACT...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | ATCACTAAATTCTCTGAATGGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGCAGTTGCAACTGGCTaGGCAATATTGGCGGGTGGC | + |
Preference number: 4 (lower is better) Translates to: ITKFSEWSSLTPYSKTVHAVATG*AILAGG Trigger: GCCACCCGCCAATATTGCTCAGCCAGTTGCAACTGC...ATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR TCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTTTTGGCTTCTCGAGTaGTTTCTTCACCTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKFWLLE*FLHLSA Trigger: AGCGGAAAGGTGAAGAAATCACTCGAGAAGCCAAAA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CACTCCAGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCGTGGATGGAGGCTGCTaGCTCACATTTAACAGTGCG | + |
Preference number: 4 (lower is better) Translates to: HSSKAQLPCNVHSSKLHIVDGGC*LTFNSA Trigger: CGCACTGTTAAATGTGAGGCAGCAGCCTCCATCCAC...GATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGCTCTGCGTAGGTCTCTaGATGACCCATTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGLCVGL*MTHFFL Trigger: GAGGAAGAAATGGGTCATGCAGAGACCTACGCAGAG...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTTATTGGCATATACTCTaGGTAGGTCTCTGCATGACC | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPYWHIL*VGLCMT Trigger: GGTCATGCAGAGACCTACGCAGAGTATATGCCAATA...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATC | + |
Preference number: 4 (lower is better) Translates to: GHSSKAQLPCNVHSSKLHCLKLQ*RQPAII Trigger: GATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCA...ATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGGCCGCATAGGTAACTaGCTCAAGCTGCAATGCAGA | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEGRIGN*LKLQCR Trigger: TCTGCATTGCAGCTTGAGGCAGTTACCTATGCGGCC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGAAAGCTCAGCTGCCGTaGAATGTACATTCCTCTAAG | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKKAQLP*NVHSSK Trigger: CTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTTACAAGGCTGCTGTTaGTGTTGCTGTTACTGTTGG | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKLQGCC*CCCYCW Trigger: CCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGTGCCCAAATCTTGGTTaGTTCCTCCCAGGACATTCC | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGCPNLG*FLPGHS Trigger: GGAATGTCCTGGGAGGAAGCAACCAAGATTTGGGCA...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTATGGTCCAGTCAGCTCTaGCCAAATCTTGGTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLWSSQL*PNLGCF Trigger: GAAGCAACCAAGATTTGGGCAGAGCTGACTGGACCA...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAAAACCTACAATCCGCTaGCCATCTTCGGTCCTTAGC | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLKPTIR*PSSVLS Trigger: GCTAAGGACCGAAGATGGGCAGCGGATTGTAGGTTT...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACTGTTTTTGTTGCACTaGGAGCTGCTGAGACTGGTC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTLFLLH*ELLRLV Trigger: GACCAGTCTCAGCAGCTCGCAGTGCAACAAAAACAG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAGCTGCAGTTGCAACTaGCTGAGCAATATTGGCGGG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQSCSCN*LSNIGG Trigger: CCCGCCAATATTGCTCAGCCAGTTGCAACTGCAGCT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTATTTACCACCAGACTaGCTTTCACCAATAAGGGAA | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDYLPPD*LSPIRE Trigger: TTCCCTTATTGGTGAAAGCCAGTCTGGTGGTAAATA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTACCTTTGCTTCTCTGTaGTGTTTAGAATCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPTFASL*CLESPQ Trigger: CTGTGGAGATTCTAAACATCACAGAGAAGCAAAGGT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAAGAGTAAGAATTCCTaGGCGATCCTCTACATTAAT | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDKSKNS*AILYIN Trigger: ATTAATGTAGAGGATCGCTCAGGAATTCTTACTCTT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTGAGTTAGAAACTTCTTaGCATCACTCTTCCTCACCT | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIELETS*HHSSSP Trigger: AGGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTC...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTATCAGTAGCTGCAGTTaGAACTGGCTGAGCAATATT | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPISSCS*NWLSNI Trigger: AATATTGCTCAGCCAGTTGCAACTGCAGCTACTGAT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGTGCCTCAAGCTGCAATaGAGACAGCCAGCCATTATC | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQCLKLQ*RQPAII Trigger: GATAATGGCTGGCTGTCTGCATTGCAGCTTGAGGCA...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAGTAACTGCCTCAAGCTaGAATGCAGACAGCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVVTASS*NADSQP Trigger: TGGCTGGCTGTCTGCATTGCAGCTTGAGGCAGTTAC...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCGGCCGCATAGGTAACTaGCTCAAGCTGCAATGCAGA | + |
Preference number: 4 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSGRIGN*LKLQCR Trigger: TCTGCATTGCAGCTTGAGGCAGTTACCTATGCGGCC...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR GCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTTTAGCAACAATAGATaGAAATCTCTGTTCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDFSNNR*KSLFSS Trigger: GCTGGAGAACAGAGATTTGCATCTATTGTTGCTAAA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGCAACAGGTACCTTCATaGTGGGGGAAAAGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKQQVPS*WGKSSS Trigger: TGAGGAGCTTTTCCCCCACCATGAAGGTACCTGTTG...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACAGCCAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTQPSLS*LALKNQ Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACAGCCAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLQPSLS*LALKNQ Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TCCTCTAAGCTTCATATCCATAGCAACGATTTCCATGGCACCAACACCTCTGCGCAGCCAAGCCTGTCTTaGTTGGCTTTGAAGAACCAA | + |
Preference number: 4 (lower is better) Translates to: SSKLHIHSNDFHGTNTSAQPSLS*LALKNQ Trigger: TTGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTG...CGCAGAGGTGTTGGTGCCATGGAAATCGTTGCTATGGATATGAAGCTTAGAGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGTGGCATAAACAACTCTaGCTTTTGGCAATTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLWHKQL*LLAICS Trigger: AGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCCA...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAAGCACCAGTGGCACTaGCATAAACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTKHQWH*HKQLWL Trigger: AAGCCAGAGTTGTTTATGCCAGTGCCACTGGTGCTT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAAGCACCAGTGGCACTaGCATAAACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGKHQWH*HKQLWL Trigger: AAGCCAGAGTTGTTTATGCCAGTGCCACTGGTGCTT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCTGCGTTCCACAGCTTaGATAAAATCACTAAATTCT | + |
Preference number: 4 (lower is better) Translates to: ELSEVLGACVALRPCRKLLRSTA*IKSLNS Trigger: AGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCCACCCTTTTCACTTTaGATGCTATACACAGGTACT | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKPPFSL*MLYTGT Trigger: AGTACCTGTGTATAGCATCCAAAGTGAAAAGGGTGG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATGTTGCTGTTACTGTTaGCTGGTGCACTGTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTCCCYC*LVHCWK Trigger: CTTCCAACAGTGCACCAGCCAACAGTAACAGCAACA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAGCTTCTCCTGTAGACTaGAGACCAATTACAACACAC | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLASPVD*RPITTH Trigger: GTGTGTTGTAATTGGTCTTCAGTCTACAGGAGAAGC...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAGGACTATCTCTTGGTaGACTGTTGTTACTTGGGGC | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQRTISW*TVVTWG Trigger: GCCCCAAGTAACAACAGTTCACCAAGAGATAGTCCT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAGGACTATCTCTTGGTaGACTGTTGTTACTTGGGGC | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMERTISW*TVVTWG Trigger: GCCCCAAGTAACAACAGTTCACCAAGAGATAGTCCT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGTTTTGGCTTCTCGAGTaGTTTCTTCACCTTTCCGCT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGFWLLE*FLHLSA Trigger: AGCGGAAAGGTGAAGAAATCACTCGAGAAGCCAAAA...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAGCAGTCACTTGGTTTaGCCTGTGTGTTCTTCCAAA | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGSSHLV*PVCSSK Trigger: TTTGGAAGAACACACAGGTCAAACCAAGTGACTGCT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGTAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAA | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEVVWRW*YHRRIQ Trigger: TTGGATTCTCCTATGGTATCACCACCTCCAGACTAC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GAATGGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATGTTGCGTTGCCTATTCGTTGTTaGAGGTGGTGTTTTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: EWSSLTPYSKTVHVGHVALPIRC*RWCFSH Trigger: ATGACTAAAACACCACCTGCAACAACGAATAGGCAA...CGCAACATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATATTGGCATATACTCTaGGTAGGTCTCTGCATGACC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTYWHIL*VGLCMT Trigger: GGTCATGCAGAGACCTACGCAGAGTATATGCCAATA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGCCAGTAAAGCTCAGCTaGCGTGCAATGTACATTCCT | + |
Preference number: 4 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKPVKLS*RAMYIP Trigger: AGGAATGTACATTGCACGGCAGCTGAGCTTTACTGG...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTGACTTGTTACAAGGCTaGTGTTGCTGTTGCTGTTAC | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFDLLQG*CCCCCY Trigger: GTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTC...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGTCGACTCGTAGGATATaGTTCCGTCATCATTGCTCA | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGSTRRI*FRHHCS Trigger: TGAGCAATGATGACGGAAGCATATCCTACGAGTCGA...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCCATCCATGAACCTTTaGTTCTCTGTGATGTTTAGA | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPPSMNL*FSVMFR Trigger: TCTAAACATCACAGAGAAGCAAAGGTTCATGGATGG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGGTCACCATGTGTAAGTaGCCCCAAACTCTCAAGTCT | + |
Preference number: 4 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKVTMCK*PQTLKS Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGAC...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGCTGATGCACCTCCATaGCCAGGATTCTGTTTAAGA | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEADAPP*PGFCLR Trigger: TCTTAAACAGAATCCTGGGCATGGAGGTGCATCAGC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGGCTGATGCACCTCCATaGCCAGGATTCTGTTTAAGA | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQADAPP*PGFCLR Trigger: TCTTAAACAGAATCCTGGGCATGGAGGTGCATCAGC...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGTGAGTACAGGTGTCTaGAGAGGAGTTATACTGATC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTVSTGV*RGVILI Trigger: GATCAGTATAACTCCTCTGCAGACACCTGTACTCAC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGTGAGTACAGGTGTCTaGAGAGGAGTTATACTGATC | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGVSTGV*RGVILI Trigger: GATCAGTATAACTCCTCTGCAGACACCTGTACTCAC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACTTAGCCGCACTATCTaGATTTTCACATTTGTGCCG | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTLSRTI*IFTFVP Trigger: CGGCACAAATGTGAAAATGCAGATAGTGCGGCTAAG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAAACGTTGTAGTGGATaGAGGCTGCTGCCTCACATT | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQKRCSG*RLLPHI Trigger: AATGTGAGGCAGCAGCCTCCATCCACTACAACGTTT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AAATTCTCTGAATGGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCAAACGTTGTAGTGGATaGAGGCTGCTGCCTCACATT | + |
Preference number: 4 (lower is better) Translates to: KFSEWSSLTPYSKTVHVGKRCSG*RLLPHI Trigger: AATGTGAGGCAGCAGCCTCCATCCACTACAACGTTT...GCCTACATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTCAGAGAATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGTATTTACCACCAGACTaGCTTTCACCAATAAGGGAA | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKYLPPD*LSPIRE Trigger: TTCCCTTATTGGTGAAAGCCAGTCTGGTGGTAAATA...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGTGTTGCTGTTACTGTTaGCTGGTGCACTGTTGGAAG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQCCCYC*LVHCWK Trigger: CTTCCAACAGTGCACCAGCCAACAGTAACAGCAACA...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAGTAAAAGCCATCATCTaGTCCAGTCAGCTCTGCCCA | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVVKAII*SSQLCP Trigger: TGGGCAGAGCTGACTGGACCAGATGATGGCTTTTAC...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAGACACACAATTTGCTaGAATGATCAAACCTACAAT | + |
Preference number: 4 (lower is better) Translates to: QRLGKGGPILFSGATKGDRHTIC*NDQTYN Trigger: ATTGTAGGTTTGATCATTCCAGCAAATTGTGTGTCT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | AAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTaGCACAAGGAGGTAGAACCCGGCACAAGTTTATTG | + |
Preference number: 4 (lower is better) Translates to: KKEAQSPCIKYP*HKEVEPGTSLL Trigger: CAATAAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CTTCATATCCATAGCAACGATTTCCATGGCACCAACACCTCTGCGTTCCACAGCAGTAAATCCTTTAGCTaGACCTGGTCTTTTGAAGGA | + |
Preference number: 4 (lower is better) Translates to: LHIHSNDFHGTNTSAFHSSKSFS*TWSFEG Trigger: TCCTTCAAAAGACCAGGTTCAGCTAAAGGATTTACT...GCTGTGGAACGCAGAGGTGTTGGTGCCATGGAAATCGTTGCTATGGATATGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR TCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGTGTTTTTCAATCAGTaGCTGCAATACCCCTTTGGC | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEVFFNQ*LQYPFG Trigger: GCCAAAGGGGTATTGCAGTCACTGATTGAAAAACAC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACACAATTTGCTGGAATaGTCAAACCTACAATCCGCT | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLHNLLE*SNLQSA Trigger: AGCGGATTGTAGGTTTGATCATTCCAGCAAATTGTG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGCACAATTTGCTGGAATaGTCAAACCTACAATCCGCT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGHNLLE*SNLQSA Trigger: AGCGGATTGTAGGTTTGATCATTCCAGCAAATTGTG...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGTCAAAGTGATGGTTTaGCTATTCGTTGTTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGVKVMV*LFVVAG Trigger: ACCTGCAACAACGAATAGGCAAACCATCACTTTGAC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATGTCAAAGTGATGGTTTaGCTATTCGTTGTTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: GHSSKAQLPCNVHSSKLHVKVMV*LFVVAG Trigger: ACCTGCAACAACGAATAGGCAAACCATCACTTTGAC...ATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGTCAAAGTGATGGTTTaGCTATTCGTTGTTGCAGGT | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTVKVMV*LFVVAG Trigger: ACCTGCAACAACGAATAGGCAAACCATCACTTTGAC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGAACCCACAGCTTGACTaGTTTGTTATACATTTTCAC | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKNPQLD*FVIHFH Trigger: GTGAAAATGTATAACAAAGCAGTCAAGCTGTGGGTT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTAACCCACAGCTTGACTaGTTTGTTATACATTTTCAC | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLINPQLD*FVIHFH Trigger: GTGAAAATGTATAACAAAGCAGTCAAGCTGTGGGTT...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGTTACAAGGCTGCTGTTaGTGTTGCTGTTACTGTTGG | + |
Preference number: 4 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKLQGCC*CCCYCW Trigger: CCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAA...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTTTTAGCAACAATAGATaGAAATCTCTGTTCTCCAGC | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPFSNNR*KSLFSS Trigger: GCTGGAGAACAGAGATTTGCATCTATTGTTGCTAAA...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTTGCAGTAAGTGTGTCTaGAAAATACTGAAACAGCGC | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFCSKCV*KILKQR Trigger: GCGCTGTTTCAGTATTTTGCAGACACACTTACTGCA...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAGTGTTTGCAGTGGTCTaGATGAACTTTGTCAAAGTG | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLVFAVV*MNFVKV Trigger: CACTTTGACAAAGTTCATCCAGACCACTGCAAACAC...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AACGATTTCCATGGCACCAACACCTCTGCGTTCCACAGCTTGGATAAAATCACTAGCAATATTGGCGGGTaGCTTCAGTTTCATGAGTTC | + |
Preference number: 4 (lower is better) Translates to: NDFHGTNTSAFHSLDKITSNIGG*LQFHEF Trigger: GAACTCATGAAACTGAAGCCACCCGCCAATATTGCT...AGTGATTTTATCCAAGCTGTGGAACGCAGAGGTGTTGGTGCCATGGAAATCGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR CCA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTGAAGCTGTTTTAACCTaGTCTTATATTTACCACCAG | + |
Preference number: 4 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIEAVLT*SYIYHQ Trigger: CTGGTGGTAAATATAAGACCAGGTTAAAACAGCTTC...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCTGCGTTCCACAGCTTaGATAAAATCACTAAATTCT | + |
Preference number: 4 (lower is better) Translates to: RGGTWPSSPASIFEQLEPLRSTA*IKSLNS Trigger: AGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAAGTTTCTTCCTGTCTaGAGCAGGGAAGTGTTTTTC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTKFLPV*SREVFF Trigger: GAAAAACACTTCCCTGCTCCAGACAGGAAGAAACTT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGATCTTCCGTTCTTCTTaGCATTCTGAACAACTGCAG | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGIFRSS*HSEQLQ Trigger: CTGCAGTTGTTCAGAATGCCAAGAAGAACGGAAGAT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGTGTATAACTCTACATaGCCGGAGGTTGAATACCCT | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEVYNST*PEVEYP Trigger: AGGGTATTCAACCTCCGGCCATGTAGAGTTATACAC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGGTGTATAACTCTACATaGCCGGAGGTTGAATACCCT | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQVYNST*PEVEYP Trigger: AGGGTATTCAACCTCCGGCCATGTAGAGTTATACAC...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 72 bp | AAGCACCAGTGGCACTGGCATAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCTCTAAAACAGCCAAGC | + |
Preference number: 4 (lower is better) Translates to: KHQWHWHKQLWL*AICSEALKQPS Trigger: GCTTGGCTGTTTTAGAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCCAGTGCCACTGGTGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAATAGTTTTCATATATaGTCCCTGCTATTGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTNSFHI*SLLLSG Trigger: GCCGGACAATAGCAGGGATCATATATGAAAACTATT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTAATAGTTTTCATATATaGTCCCTGCTATTGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFNSFHI*SLLLSG Trigger: GCCGGACAATAGCAGGGATCATATATGAAAACTATT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTTTTGGCAATTTGTTCTaGAGCTCTAAAACAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFFGNLF*SSKTAK Trigger: CTTGGCTGTTTTAGAGCTTCAGAACAAATTGCCAAA...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGCTAACAAGGCACTTTaGATGGAATCTGGATCTATA | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTANKAL*MESGSI Trigger: TATAGATCCAGATTCCATTCAAAGTGCCTTGTTAGC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR TCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGACCTTTGCTTCTCTGTaGTGTTTAGAATCTCCACAG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQTFASL*CLESPQ Trigger: CTGTGGAGATTCTAAACATCACAGAGAAGCAAAGGT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR GCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGTTTTCAATCAGTGACTaGAATACCCCTTTGGCAGTT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGFSISD*NTPLAV Trigger: AACTGCCAAAGGGGTATTGCAGTCACTGATTGAAAA...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR GCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTATTTCTAATTTGAGTTaGTTCCCAGTGTTTGGTCGG | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFISNLS*FPVFGR Trigger: CCGACCAAACACTGGGAAGCAACTCAAATTAGAAAT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGATTCGTTGTTGCAGGTaGTGTTTTAGTCATTACAAT | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKIRCCR*CFSHYN Trigger: ATTGTAATGACTAAAACACCACCTGCAACAACGAAT...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | TCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGAATTCGTTGTTGCAGGTaGTGTTTTAGTCATTACAAT | + |
Preference number: 4 (lower is better) Translates to: SLTPYSKTVHVGHVAWFRIRCCR*CFSHYN Trigger: ATTGTAATGACTAAAACACCACCTGCAACAACGAAT...TCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGGTGTTTGCAGTGGTCTaGATGAACTTTGTCAAAGTG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQVFAVV*MNFVKV Trigger: CACTTTGACAAAGTTCATCCAGACCACTGCAAACAC...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAAGCAATATTGGCGGGTaGCTTCAGTTTCATGAGTTC | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVSNIGG*LQFHEF Trigger: GAACTCATGAAACTGAAGCCACCCGCCAATATTGCT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | ATCAATCAAATCTGCAGCTTGTTGAAATCGCTCTCTAGCGATAACCCACTGAAACAACAGGTACCTTCATaGTGGGGGAAAAGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: INQICSLLKSLSSDNPLKQQVPS*WGKSSS Trigger: TGAGGAGCTTTTCCCCCACCATGAAGGTACCTGTTG...TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR CCA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCACTCCCATTGTGTTTaGAAGAAATCTTACCATATT | + |
Preference number: 4 (lower is better) Translates to: SCSHDMECLVHFSTRGPKHSHCV*KKSYHI Trigger: AATATGGTAAGATTTCTTCCAAACACAATGGGAGTG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | TTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGAAGCACCTAGTAAACAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: FQDGSCRPCCVVQKHLVNNNSGF*QFVLKL Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...GTTTACTAGGTGCTTCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
CDS-3UTR CCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAACTAAATTCTCTGAATaGAGTTCCCTCACCCCATAT | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTTKFSE*SSLTPY Trigger: ATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGACTAAATTCTCTGAATaGAGTTCCCTCACCCCATAT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGTKFSE*SSLTPY Trigger: ATATGGGGTGAGGGAACTCCATTCAGAGAATTTAGT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAACCACCCTTTTCACTTTaGATGCTATACACAGGTACT | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEPPFSL*MLYTGT Trigger: AGTACCTGTGTATAGCATCCAAAGTGAAAAGGGTGG...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCACTTACCAGTGGCACTaGCATAAACAACTCTGGCTT | + |
Preference number: 4 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSTYQWH*HKQLWL Trigger: AAGCCAGAGTTGTTTATGCCAGTGCCACTGGTAAGT...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
3UTR CAA 72 bp | GATTTCCATGGCACCAACACCTCTGCGTTCCACAGCTaGGATAAAATCACTAAATTCTCTGAATGGAGTTCC | + |
Preference number: 4 (lower is better) Translates to: DFHGTNTSAFHS*DKITKFSEWSS Trigger: GGAACTCCATTCAGAGAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGAGGTGTTGGTGCCATGGAAATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000199004.5 ENSMUST00000200674.2 |
||
3UTR CAA 72 bp | CTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGCGATAACCCACAGCTT | + |
Preference number: 4 (lower is better) Translates to: LHSLLSINQICS*LKSLSSDNPQL Trigger: AAGCTGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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3UTR CAA 72 bp | GGGTTTCAGAACAGCCAGGGATATTATGCAAAGTCCTaGTCTGCCTCCAATCCCCAGAAAGAAAACACAATA | + |
Preference number: 4 (lower is better) Translates to: GFQNSQGYYAKS*SASNPQKENTI Trigger: TATTGTGTTTTCTTTCTGGGGATTGGAGGCAGACAAGGACTTTGCATAATATCCCTGGCTGTTCTGAAACCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR TCA 90 bp | CACTCCAGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCAATAGTTTTCATATATaGTCCCTGCTATTGTCCGGC | + |
Preference number: 4 (lower is better) Translates to: HSSKAQLPCNVHSSKLHINSFHI*SLLLSG Trigger: GCCGGACAATAGCAGGGATCATATATGAAAACTATT...GATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACTGGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR TCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAATTTGGCAATTTGTTCTaGAGCTCTAAAACAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEFGNLF*SSKTAK Trigger: CTTGGCTGTTTTAGAGCTTCAGAACAAATTGCCAAA...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAAAATCTGCAGCTTGTTaGAATCGCTCTCTAGCGATA | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVKSAAC*NRSLAI Trigger: TATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGGCTAACAAGGCACTTTaGATGGAATCTGGATCTATA | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQANKAL*MESGSI Trigger: TATAGATCCAGATTCCATTCAAAGTGCCTTGTTAGC...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTAATTCTAAAGTCATGTaGACTCTTCGCCTTTGGTTT | + |
Preference number: 4 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFNSKVM*TLRLWF Trigger: AAACCAAAGGCGAAGAGTTCACATGACTTTAGAATT...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAAATTCTAAAGTCATGTaGACTCTTCGCCTTTGGTTT | + |
Preference number: 4 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLNSKVM*TLRLWF Trigger: AAACCAAAGGCGAAGAGTTCACATGACTTTAGAATT...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAAGAGTAAGAATTCCTaGGCGATCCTCTACATTAAT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGKSKNS*AILYIN Trigger: ATTAATGTAGAGGATCGCTCAGGAATTCTTACTCTT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAGAGTTAGAAACTTCTTaGCATCACTCTTCCTCACCT | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVELETS*HHSSSP Trigger: AGGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTC...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGTTGCCTATTCGTTGTTaGAGGTGGTGTTTTAGTCAT | + |
Preference number: 4 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKLPIRC*RWCFSH Trigger: ATGACTAAAACACCACCTGCAACAACGAATAGGCAA...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCATCAGTAGCTGCAGTTaGAACTGGCTGAGCAATATT | + |
Preference number: 4 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSISSCS*NWLSNI Trigger: AATATTGCTCAGCCAGTTGCAACTGCAGCTACTGAT...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR GCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGCCATCCATGAACCTTTaGTTCTCTGTGATGTTTAGA | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQPSMNL*FSVMFR Trigger: TCTAAACATCACAGAGAAGCAAAGGTTCATGGATGG...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAATCTCTAGATTCTGTTaGTCTTCTGTCACCATGTGT | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEISRFC*SSVTMC Trigger: ACACATGGTGACAGAAGAGCAACAGAATCTAGAGAT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTTGGTCCAGTCAGCTCTaGCCAAATCTTGGTTGCTTC | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFWSSQL*PNLGCF Trigger: GAAGCAACCAAGATTTGGGCAGAGCTGACTGGACCA...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAATTTCTAATTTGAGTTaGTTCCCAGTGTTTGGTCGG | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMEISNLS*FPVFGR Trigger: CCGACCAAACACTGGGAAGCAACTCAAATTAGAAAT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAGGAGACACACAATTTaGTGGAATGATCAAACCTAC | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMERRHTI*WNDQTY Trigger: GTAGGTTTGATCATTCCAGCAAATTGTGTGTCTCCT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTCAACAGGTACCTTCATaGTGGGGGAAAAGCTCCTCA | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFQQVPS*WGKSSS Trigger: TGAGGAGCTTTTCCCCCACCATGAAGGTACCTGTTG...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: PLHLLSNASHSGPSANMENNSGF*QFVLKL Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGTGGCATAAACAACTCTaGCTTTTGGCAATTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGWHKQL*LLAICS Trigger: AGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCCA...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAATCTTCCGTTCTTCTTaGCATTCTGAACAACTGCAG | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVIFRSS*HSEQLQ Trigger: CTGCAGTTGTTCAGAATGCCAAGAAGAACGGAAGAT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
3UTR CAA 72 bp | CATTCTCTGCTCAGCATCAATCAAATCTGCAGCTTGTaGAAATCGCTCTCTAGCGATAACCCACTGAAAACA | + |
Preference number: 4 (lower is better) Translates to: HSLLSINQICSL*KSLSSDNPLKT Trigger: TGTTTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CAA 72 bp | CTTCATTCTCTGCTCAGCATCAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGCGATAACCCACTGAAA | + |
Preference number: 4 (lower is better) Translates to: LHSLLSINQICS*LKSLSSDNPLK Trigger: TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGATGCTGAGCAGAGAATGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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3UTR CAA 72 bp | CTACTTGTGATACTAAGGCAGGAAGACTGCTATGAGTaGATCCTACACAACGCACCAAATACCAAACCAATC | + |
Preference number: 4 (lower is better) Translates to: LLVILRQEDCYE*ILHNAPNTKPI Trigger: GATTGGTTTGGTATTTGGTGCGTTGTGTAGGATCAACTCATAGCAGTCTTCCTGCCTTAGTATCACAAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR GCA 90 bp | GAAAGAAAAACTATTCATAGTTCACGTCTGTCAAATCCTGAAGCACCTGACATTCTCTGCGTAGGTCTCTaGATGACCCATTTCTTCCTC | + |
Preference number: 4 (lower is better) Translates to: ERKTIHSSRLSNPEAPDILCVGL*MTHFFL Trigger: GAGGAAGAAATGGGTCATGCAGAGACCTACGCAGAG...AATGTCAGGTGCTTCAGGATTTGACAGACGTGAACTATGAATAGTTTTTCTTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR GCA 90 bp | ATCAATCAAATCTGCAGCTTGTTGAAATCGCTCTCTAGCGATAACCCACTGAAATATTGGCATATACTCTaGGTAGGTCTCTGCATGACC | + |
Preference number: 4 (lower is better) Translates to: INQICSLLKSLSSDNPLKYWHIL*VGLCMT Trigger: GGTCATGCAGAGACCTACGCAGAGTATATGCCAATA...TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR GCA 90 bp | CAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGAACTTCGTAACTGCCTCAAGCTaGAATGCAGACAGCCAGCCA | + |
Preference number: 4 (lower is better) Translates to: QLDCFVIHFHIALRKKNFVTASS*NADSQP Trigger: TGGCTGGCTGTCTGCATTGCAGCTTGAGGCAGTTAC...GAAGTTCTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGATTTCTTCATTCTCTaGTCAGCATCAATCAAATCT | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTDFFIL*SASIKS Trigger: AGATTTGATTGATGCTGAGCAGAGAATGAAGAAATC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACCTTTTCACTTTGGATaGTATACACAGGTACTTAAA | + |
Preference number: 4 (lower is better) Translates to: HSDGQSYAAQQYKRELKTPFHFG*YTQVLK Trigger: TTTAAGTACCTGTGTATAGCATCCAAAGTGAAAAGG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTATTTTCAATCAGTGACTaGAATACCCCTTTGGCAGTT | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVFSISD*NTPLAV Trigger: AACTGCCAAAGGGGTATTGCAGTCACTGATTGAAAA...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR GCA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAAGGAGACACACAATTTaGTGGAATGATCAAACCTAC | + |
Preference number: 4 (lower is better) Translates to: KATNEPECMARNPSLHAVRRHTI*WNDQTY Trigger: GTAGGTTTGATCATTCCAGCAAATTGTGTGTCTCCT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | ATTTCCATGGCACCAACACCTCTGCGTTCCACAGCTTGGATAAAATCACTAAATGTGTTTGCAGTGGTCTaGATGAACTTTGTCAAAGTG | + |
Preference number: 4 (lower is better) Translates to: ISMAPTPLRSTAWIKSLNVFAVV*MNFVKV Trigger: CACTTTGACAAAGTTCATCCAGACCACTGCAAACAC...ATTTAGTGATTTTATCCAAGCTGTGGAACGCAGAGGTGTTGGTGCCATGGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
||
CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGCACTCCCATTGTGTTTaGAAGAAATCTTACCATATT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGHSHCV*KKSYHI Trigger: AATATGGTAAGATTTCTTCCAAACACAATGGGAGTG...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | TTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGAAGCACCTAGTAAACCACTCCCATTGTGTTTaGAAGAAATCTTACCATATT | + |
Preference number: 4 (lower is better) Translates to: FQDGSCRPCCVVQKHLVNHSHCV*KKSYHI Trigger: AATATGGTAAGATTTCTTCCAAACACAATGGGAGTG...GTTTACTAGGTGCTTCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
||
CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGGAAGCTGTTTTAACCTaGTCTTATATTTACCACCAG | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQEAVLT*SYIYHQ Trigger: CTGGTGGTAAATATAAGACCAGGTTAAAACAGCTTC...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CCA 90 bp | AGAACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGGAAGCTGTTTTAACCTaGTCTTATATTTACCACCAG | + |
Preference number: 4 (lower is better) Translates to: RTSSILKVTPVKLSCRAMEAVLT*SYIYHQ Trigger: CTGGTGGTAAATATAAGACCAGGTTAAAACAGCTTC...CATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGACTGCAATACCCCTTTaGCAGTTGAAACAAAATCAT | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQTAIPL*QLKQNH Trigger: ATGATTTTGTTTCAACTGCCAAAGGGGTATTGCAGT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGACAAGGCACTTTGAATaGAATCTGGATCTATACTTT | + |
Preference number: 4 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGTRHFE*NLDLYF Trigger: AAAGTATAGATCCAGATTCCATTCAAAGTGCCTTGT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | ATTTCTGAGGGAACAATCGGTGACAGACCCTCATTCTaGACTACTAACTTACAAAGACAGCCAAATGTAGAC | + |
Preference number: 4 (lower is better) Translates to: ISEGTIGDRPSF*TTNLQRQPNVD Trigger: GTCTACATTTGGCTGTCTTTGTAAGTTAGTAGTCAAGAATGAGGGTCTGTCACCGATTGTTCCCTCAGAAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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3UTR CAA 72 bp | TGGGCAAATGAACCCTGCTCAGTGAAGCTGACACACTaGTATTGCATGAGACTGGATTTGAAAGTTACATAT | + |
Preference number: 4 (lower is better) Translates to: WANEPCSVKLTH*YCMRLDLKVTY Trigger: ATATGTAACTTTCAAATCCAGTCTCATGCAATACAAGTGTGTCAGCTTCACTGAGCAGGGTTCATTTGCCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTGCTTCTCCTGTAGACTaGAGACCAATTACAACACAC | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFASPVD*RPITTH Trigger: GTGTGTTGTAATTGGTCTTCAGTCTACAGGAGAAGC...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTAAAGCTCAGCTGCCGTaGAATGTACATTCCTCTAAG | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFKAQLP*NVHSSK Trigger: CTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGCCTTTTCACTTTGGATaGTATACACAGGTACTTAAA | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQPFHFG*YTQVLK Trigger: TTTAAGTACCTGTGTATAGCATCCAAAGTGAAAAGG...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTGACTTGTTACAAGGCTaGTGTTGCTGTTGCTGTTAC | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFDLLQG*CCCCCY Trigger: GTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTC...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR GCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTCTTAGCCGCACTATCTaGATTTTCACATTTGTGCCG | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFLSRTI*IFTFVP Trigger: CGGCACAAATGTGAAAATGCAGATAGTGCGGCTAAG...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | ATTTCCATGGCACCAACACCTCTGCGTTCCACAGCTTGGATAAAATCACTAAATTATTTACCACCAGACTaGCTTTCACCAATAAGGGAA | + |
Preference number: 4 (lower is better) Translates to: ISMAPTPLRSTAWIKSLNYLPPD*LSPIRE Trigger: TTCCCTTATTGGTGAAAGCCAGTCTGGTGGTAAATA...ATTTAGTGATTTTATCCAAGCTGTGGAACGCAGAGGTGTTGGTGCCATGGAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | AAGAACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATTGGCATAAACAACTCTaGCTTTTGGCAATTTGTTCT | + |
Preference number: 4 (lower is better) Translates to: KNFLNFEGHSSKAQLPCNWHKQL*LLAICS Trigger: AGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCCA...ATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGAGACACACAATTTGCTaGAATGATCAAACCTACAAT | + |
Preference number: 4 (lower is better) Translates to: LFTKKTREILQVLLWKHQRHTIC*NDQTYN Trigger: ATTGTAGGTTTGATCATTCCAGCAAATTGTGTGTCT...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGTAATATATACTTACCAGTaGCACTGGCATAAACAACTC | + |
Preference number: 4 (lower is better) Translates to: NFLNFEGHSSKAQLPCNVIYTYQ*HWHKQL Trigger: GAGTTGTTTATGCCAGTGCCACTGGTAAGTATATAT...TACATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR GCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTATCTCTAGATTCTGTTaGTCTTCTGTCACCATGTGT | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFISRFC*SSVTMC Trigger: ACACATGGTGACAGAAGAGCAACAGAATCTAGAGAT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTTGGTCTCTTCAGAGATaGAGGTTTTGTACCAAACAT | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFWSLQR*RFCTKH Trigger: ATGTTTGGTACAAAACCTCCATCTCTGAAGAGACCA...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTAACAACTCTGGCTTTTaGCAATTTGTTCTGAAGCTC | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFNNSGF*QFVLKL Trigger: GAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CCA 90 bp | AACCCACAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGTGGTCTCTTCAGAGATaGAGGTTTTGTACCAAACAT | + |
Preference number: 4 (lower is better) Translates to: NPQLDCFVIHFHIALRKKWSLQR*RFCTKH Trigger: ATGTTTGGTACAAAACCTCCATCTCTGAAGAGACCA...CTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTGTGGGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTACTGCAATACCCCTTTaGCAGTTGAAACAAAATCAT | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFTAIPL*QLKQNH Trigger: ATGATTTTGTTTCAACTGCCAAAGGGGTATTGCAGT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR TCA 90 bp | CAGCTTGACTGCTTTGTTATACATTTTCACATAGCTTTGAGAAAGAAGAACTTCTTTGGCAATTTGTTCTaGAGCTCTAAAACAGCCAAG | + |
Preference number: 4 (lower is better) Translates to: QLDCFVIHFHIALRKKNFFGNLF*SSKTAK Trigger: CTTGGCTGTTTTAGAGCTTCAGAACAAATTGCCAAA...GAAGTTCTTCTTTCTCAAAGCTATGTGAAAATGTATAACAAAGCAGTCAAGCTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CCA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTACAAGGCACTTTGAATaGAATCTGGATCTATACTTT | + |
Preference number: 4 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFTRHFE*NLDLYF Trigger: AAAGTATAGATCCAGATTCCATTCAAAGTGCCTTGT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCTCACTACCCGCCCTTaGCGGCCAGTCATCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPLTTRP*RPVISA Trigger: GGCTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | TCTGTCTCCAACCCTAGTTCTAATGCACTAAGTGGCACCGACTGTTaGACTGAAGGGGGCGTAGGGGTGGCAAGGCCAGCATCTCCACCA | + |
Preference number: 5 (lower is better) Translates to: SVSNPSSNALSGTDC*TEGGVGVARPASPP Trigger: TGGTGGAGATGCTGGCCTTGCCACCCCTACGCCCCCTTCAGTTCAACAGTCGGTGCCACTTAGTGCATTAGAACTAGGGTTGGAGACAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000197777.2 ENSMUST00000199004.5 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTTGGCTGGTGCACTGTaGGAAGCAGGCGAGATGACT | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDLAGAL*EAGEMT Trigger: AGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | GACAGAGGCCAGAACACCTTCCACTTTTGTCCAGACGCTCAGTACTaGGCCACACAGTACATAGTACGTGCGGCAGCGGAGACCAATCTC | + |
Preference number: 5 (lower is better) Translates to: DRGQNTFHFCPDAQY*ATQYIVRAAAETNL Trigger: GAGATTGGTCTCCGCTGCCGCACGTACTATGTACTGTGTGGCTCAGTACTGAGCGTCTGGACAAAAGTGGAAGGTGTTCTGGCCTCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAGGCTGCTGTTGCTGTaGCTGTTACTGTTGGCTGGT | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDRLLLL*LLLLAG Trigger: ACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACTCACTACCCGCCCTTaGCGGCCAGTCATCTCAGCC | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLLTTRP*RPVISA Trigger: GGCTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | GAATCTCCACAGGCACATCAAGTTCAGACCTCGACTCGTAGGATATaGTTCCGTCATCATTGCTCACTACCCGCCCTTTGCGGCCAGTCA | + |
Preference number: 5 (lower is better) Translates to: ESPQAHQVQTSTRRI*FRHHCSLPALCGQS Trigger: TGACTGGCCGCAAAGGGCGGGTAGTGAGCAATGATGACGGAAGCATATCCTACGAGTCGAGGTCTGAACTTGATGTGCCTGTGGAGATTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGACATCGGCTCTGGCTCTaGTTTGACAGGAACTGCTGC | + |
Preference number: 5 (lower is better) Translates to: SLTPYSKTVHVGHVAWFRHRLWL*FDRNCC Trigger: GCAGCAGTTCCTGTCAAACAAGAGCCAGAGCCGATG...TCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS GCA 90 bp | AAACCTACAATCCGCTGCCCATCTTCGGTCCTTAGCCGCACTATCTaGATTTTCACATTTGTGCCGCTGACAGAGGCCAGAACACCTTCC | + |
Preference number: 5 (lower is better) Translates to: KPTIRCPSSVLSRTI*IFTFVPLTEARTPS Trigger: GGAAGGTGTTCTGGCCTCTGTCAGCGGCACAAATGTGAAAATGCAGATAGTGCGGCTAAGGACCGAAGATGGGCAGCGGATTGTAGGTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCTGCCCAAATCTTGGTaGCTTCCTCCCAGGACATTC | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPLPKSW*LPPRTF Trigger: GAATGTCCTGGGAGGAAGCAACCAAGATTTGGGCAG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | CTTCGGTCCTTAGCCGCACTATCTGCATTTTCACATTTGTGCCGCTaGCAGAGGCCAGAACACCTTCCACTTTTGTCCAGACGCTCAGTA | + |
Preference number: 5 (lower is better) Translates to: LRSLAALSAFSHLCR*QRPEHLPLLSRRSV Trigger: TACTGAGCGTCTGGACAAAAGTGGAAGGTGTTCTGGCCTCTGTCAGCGGCACAAATGTGAAAATGCAGATAGTGCGGCTAAGGACCGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 90 bp | ACTTGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGCTGGTaGACTGTTGGAAGCAGGCGAGATGACTGGTGCAGAGGAGAAACT | + |
Preference number: 5 (lower is better) Translates to: TCYKAAVAVAVTVGW*TVGSRRDDWCRGET Trigger: AGTTTCTCCTCTGCACCAGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 90 bp | CATCAAGTTCAGACCTCGACTCGTAGGATATGCTTCCGTCATCATTaGTCACTACCCGCCCTTTGCGGCCAGTCATCTCAGCCACATTTT | + |
Preference number: 5 (lower is better) Translates to: HQVQTSTRRICFRHH*SLPALCGQSSQPHF Trigger: AAAATGTGGCTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAGCAATGATGACGGAAGCATATCCTACGAGTCGAGGTCTGAACTTGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CCA 90 bp | TTGACTTGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGCTaGTGCACTGTTGGAAGCAGGCGAGATGACTGGTGCAGAGGAGAA | + |
Preference number: 5 (lower is better) Translates to: LTCYKAAVAVAVTVG*CTVGSRRDDWCRGE Trigger: TTCTCCTCTGCACCAGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGCCAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG | + |
Preference number: 5 (lower is better) Translates to: SCSHDMECLVHFSTRGPKPSLSW*ALKNQQ Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGG...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAATGGAGTTCCCTCACCCCATATTCCAAGACGGTTCATGTAGGCCATGTTGCGACAGCCAAGCCTGTCTaGGTTGGCTTTGAAGAACCA | + |
Preference number: 5 (lower is better) Translates to: EWSSLTPYSKTVHVGHVATAKPV*VGFEEP Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGT...CGCAACATGGCCTACATGAACCGTCTTGGAATATGGGGTGAGGGAACTCCATTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CAA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCAAATCTGCAGCTTGTaGAAATCGCTCTCTAGCGAT | + |
Preference number: 5 (lower is better) Translates to: ELSEVLGACVALRPCRKLQICSL*KSLSSD Trigger: ATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGTCTCTTGGTGAACTGTaGTTACTTGGGGCTGTCAAA | + |
Preference number: 5 (lower is better) Translates to: ELSEVLGACVALRPCRKLSLGEL*LLGAVK Trigger: TTTGACAGCCCCAAGTAACAACAGTTCACCAAGAGA...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTATTGGCTGGTGCACTGTaGGAAGCAGGCGAGATGACT | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLLAGAL*EAGEMT Trigger: AGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAA...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGAGCTCTGCCCAAATCTaGGTTGCTTCCTCCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGSSAQI*VASSQD Trigger: GTCCTGGGAGGAAGCAACCAAGATTTGGGCAGAGCT...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTCTGTGGGTGATGCTGTaGCCACAGCTGTTTTTGTTG | + |
Preference number: 5 (lower is better) Translates to: IHTQNEGAGTLGHRIVLILWVML*PQLFLL Trigger: CAACAAAAACAGCTGTGGCAACAGCATCACCCACAG...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCTGTGGGTGATGCTGTaGCCACAGCTGTTTTTGTTG | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPLWVML*PQLFLL Trigger: CAACAAAAACAGCTGTGGCAACAGCATCACCCACAG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | TCATCTGTTGCGCCCTTTCGACAGCATCTTGACTTGTTACAAGGCTaGTGTTGCTGTTGCTGTTACTGTTGGCTGGTGCACTGTTGGAAG | + |
Preference number: 5 (lower is better) Translates to: SSVAPFRQHLDLLQG*CCCCCYCWLVHCWK Trigger: CTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGCAACAGATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CCA 90 bp | GTAAATCCTTTAGCTGAACCTGGTCTTTTGAAGGAGCAGCGGGCATaGCATTTCGTACTGCTGGTGCTGAAACTGAAGGGCGTGTGTTTG | + |
Preference number: 5 (lower is better) Translates to: VNPLAEPGLLKEQRA*HFVLLVLKLKGVCL Trigger: CAAACACACGCCCTTCAGTTTCAGCACCAGCAGTACGAAATGCCATGCCCGCTGCTCCTTCAAAAGACCAGGTTCAGCTAAAGGATTTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000198420.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGCATCGGCTCTGGCTCTaGTTTGACAGGAACTGCTGC | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKHRLWL*FDRNCC Trigger: GCAGCAGTTCCTGTCAAACAAGAGCCAGAGCCGATG...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACGCGATAACCCACAGCTaGACTGCTTTGTTATACATT | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDAITHS*TALLYI Trigger: AATGTATAACAAAGCAGTCAAGCTGTGGGTTATCGC...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAAGGCTGCTGTTGCTGTaGCTGTTACTGTTGGCTGGT | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTRLLLL*LLLLAG Trigger: ACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTCCTTTCGACAGCATCTaGACTTGTTACAAGGCTGCT | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPPFDSI*TCYKAA Trigger: AGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGG...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACTGCCCAAATCTTGGTaGCTTCCTCCCAGGACATTC | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTLPKSW*LPPRTF Trigger: GAATGTCCTGGGAGGAAGCAACCAAGATTTGGGCAG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAGCTCTGCCCAAATCTaGGTTGCTTCCTCCCAGGAC | + |
Preference number: 5 (lower is better) Translates to: PLHLLSNASHSGPSANMESSAQI*VASSQD Trigger: GTCCTGGGAGGAAGCAACCAAGATTTGGGCAGAGCT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCCTAAACTTGCTTTTTaGCAATTGCCACGCCAGTAT | + |
Preference number: 5 (lower is better) Translates to: ELSEVLGACVALRPCRKLPKLAF*QLPRQY Trigger: ATACTGGCGTGGCAATTGCAAAAAAGCAAGTTTAGG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | CTTTTGTCCAGACGCTCAGTACTGAGCCACACAGTACATAGTACGTaGGGCAGCGGAGACCAATCTCACATACCAATCCTAAACTTGCTT | + |
Preference number: 5 (lower is better) Translates to: LLSRRSVLSHTVHST*GSGDQSHIPILNLL Trigger: AAGCAAGTTTAGGATTGGTATGTGAGATTGGTCTCCGCTGCCGCACGTACTATGTACTGTGTGGCTCAGTACTGAGCGTCTGGACAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTACATCGGCTCTGGCTCTaGTTTGACAGGAACTGCTGC | + |
Preference number: 5 (lower is better) Translates to: KATNEPECMARNPSLHAVHRLWL*FDRNCC Trigger: GCAGCAGTTCCTGTCAAACAAGAGCCAGAGCCGATG...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDKQLWL*AICSEA Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTACCACCCTTTTCACTTaGGATGCTATACACAGGTAC | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPTTLFT*DAIHRY Trigger: GTACCTGTGTATAGCATCCAAAGTGAAAAGGGTGGT...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTACAAGGACTATCTCTaGGTGAACTGTTGTTACTTG | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDYKDYL*VNCCYL Trigger: CAAGTAACAACAGTTCACCAAGAGATAGTCCTTGTA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACACTTTTCGTGCTTTTTaGGCTTCTCGAGTGATTTCT | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDTFRAF*ASRVIS Trigger: AGAAATCACTCGAGAAGCCAAAAAAGCACGAAAAGT...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTTCATCTCTGAAGGGATaGAAATCGTCATCATCCCCA | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPSSLKG*KSSSSP Trigger: TGGGGATGATGACGATTTCAATCCCTTCAGAGATGA...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTCTGTTGCTGTTACTGTaGGCTGGTGCACTGTTGGAA | + |
Preference number: 5 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFLLLLL*AGALLE Trigger: TTCCAACAGTGCACCAGCCAACAGTAACAGCAACAG...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGGAGTTAGAAACTTCTaGACATCACTCTTCCTCACC | + |
Preference number: 5 (lower is better) Translates to: SCSHDMECLVHFSTRGPKGVRNF*TSLFLT Trigger: GGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTCC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGAACACCTTCCACTTTaGTCCAGACGCTCAGTACTG | + |
Preference number: 5 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGEHLPL*SRRSVL Trigger: CAGTACTGAGCGTCTGGACAAAAGTGGAAGGTGTTC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTGAACACCTTCCACTTTaGTCCAGACGCTCAGTACTG | + |
Preference number: 5 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFEHLPL*SRRSVL Trigger: CAGTACTGAGCGTCTGGACAAAAGTGGAAGGTGTTC...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGAGACTGGTCTGAAGTaGACAGGAGATTTACAAGAG | + |
Preference number: 5 (lower is better) Translates to: SCSHDMECLVHFSTRGPKETGLK*TGDLQE Trigger: CTCTTGTAAATCTCCTGTCAACTTCAGACCAGTCTC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | TCAAGCAGGTCTTTCTTCATCTGTTGCGCCCTTTCGACAGCATCTTaGCTTGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGCT | + |
Preference number: 5 (lower is better) Translates to: SSRSFFICCALSTAS*LVTRLLLLLLLLLA Trigger: AGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGCAACAGATGAAGAAAGACCTGCTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAACAGCCAAGCCTGTCTaGGTTGGCTTTGAAGAACCA | + |
Preference number: 5 (lower is better) Translates to: PLHLLSNASHSGPSANMETAKPV*VGFEEP Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGACAGCCAAGCCTGTCTaGGTTGGCTTTGAAGAACCA | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKTAKPV*VGFEEP Trigger: TGGTTCTTCAAAGCCAACCAAGACAGGCTTGGCTGT...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGTTAAGTGAGGTCCTGGGTGCATGTGTGGCACTCAGACCCTGCAGGAAACTGCATTTTCACATAGCTTaGAGAAAGAAGAACTTCCTC | + |
Preference number: 5 (lower is better) Translates to: ELSEVLGACVALRPCRKLHFHIA*RKKNFL Trigger: GAGGAAGTTCTTCTTTCTCAAAGCTATGTGAAAATG...CAGTTTCCTGCAGGGTCTGAGTGCCACACATGCACCCAGGACCTCACTTAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTGCGATAACCCACAGCTaGACTGCTTTGTTATACATT | + |
Preference number: 5 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIAITHS*TALLYI Trigger: AATGTATAACAAAGCAGTCAAGCTGTGGGTTATCGC...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTGACTGCAATACCCCTTaGGCAGTTGAAACAAAATCA | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPDCNTP*AVETKS Trigger: TGATTTTGTTTCAACTGCCAAAGGGGTATTGCAGTC...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTGACTGCAATACCCCTTaGGCAGTTGAAACAAAATCA | + |
Preference number: 5 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIDCNTP*AVETKS Trigger: TGATTTTGTTTCAACTGCCAAAGGGGTATTGCAGTC...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAACTGTTGCTGTTACTGTaGGCTGGTGCACTGTTGGAA | + |
Preference number: 5 (lower is better) Translates to: PLHLLSNASHSGPSANMELLLLL*AGALLE Trigger: TTCCAACAGTGCACCAGCCAACAGTAACAGCAACAG...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGTTACAAGGCTGCTGTaGCTGTTGCTGTTACTGTTG | + |
Preference number: 5 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGVTRLL*LLLLLL Trigger: CAACAGTAACAGCAACAGCAACAGCAGCCTTGTAAC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACACCTTTCGACAGCATCTaGACTTGTTACAAGGCTGCT | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTPFDSI*TCYKAA Trigger: AGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGG...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAGTGAACTCTTCGCCTTaGGTTTTTAGCTCTCCGATC | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTVNSSP*VFSSPI Trigger: GATCGGAGAGCTAAAAACCAAAGGCGAAGAGTTCAC...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CAGAGGCTAGGTAAAGGAGGACCCATTCTATTCTCAGGGGCCACAAAGGGGGACTACTTGTTGTCAAAGTaGAATCTGCTCAGATCTCTA | + |
Preference number: 5 (lower is better) Translates to: QRLGKGGPILFSGATKGDYLLSK*NLLRSL Trigger: TAGAGATCTGAGCAGATTCAACTTTGACAACAAGTA...GTCCCCCTTTGTGGCCCCTGAGAATAGAATGGGTCCTCCTTTACCTAGCCTCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | ACTCTACATGGCCGGAGGTTGAATACCCTGGAGTTAGAAACTTCTTaGCATCACTCTTCCTCACCTTCTCATCTCCAGAACCCAGATCTA | + |
Preference number: 5 (lower is better) Translates to: TLHGRRLNTLELETS*HHSSSPSHLQNPDL Trigger: TAGATCTGGGTTCTGGAGATGAGAAGGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTCCAGGGTATTCAACCTCCGGCCATGTAGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
||
CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATGTCAAAGTGATGGTTaGCCTATTCGTTGTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTCQSDG*PIRCCR Trigger: CCTGCAACAACGAATAGGCAAACCATCACTTTGACA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACATCAGAGATGGAGGTTTaGTACCAAACATCAGGAGGA | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTSEMEV*YQTSGG Trigger: TCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGA...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTTCAGAGATGGAGGTTTaGTACCAAACATCAGGAGGA | + |
Preference number: 5 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFSEMEV*YQTSGG Trigger: TCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGA...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TCCTCTAAGCTTCATATCCATAGCAACGATTTCCATGGCACCAACACCTCTGCGTCAGAGATGGAGGTTTaGTACCAAACATCAGGAGGA | + |
Preference number: 5 (lower is better) Translates to: SSKLHIHSNDFHGTNTSASEMEV*YQTSGG Trigger: TCCTCCTGATGTTTGGTACAAAACCTCCATCTCTGA...CGCAGAGGTGTTGGTGCCATGGAAATCGTTGCTATGGATATGAAGCTTAGAGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTACCAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG | + |
Preference number: 5 (lower is better) Translates to: KATNEPECMARNPSLHAVPSLSW*ALKNQQ Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGG...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGTAAAGCTCAGCTGCCGTGCAATGTACATTCCTCTAAGCTTCATATCCATAGCCCAAGCCTGTCTTGGTaGGCTTTGAAGAACCAACAG | + |
Preference number: 5 (lower is better) Translates to: SKAQLPCNVHSSKLHIHSPSLSW*ALKNQQ Trigger: CTGTTGGTTCTTCAAAGCCAACCAAGACAGGCTTGG...GCTATGGATATGAAGCTTAGAGGAATGTACATTGCACGGCAGCTGAGCTTTACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CAA 90 bp | AGGGGAGGAACATGGCCTTCCTCTCCAGCAAGTATATTTGAGCAGCTGGAACCTTCTGCGTTCCACAGCTaGGATAAAATCACTAAATTC | + |
Preference number: 5 (lower is better) Translates to: RGGTWPSSPASIFEQLEPSAFHS*DKITKF Trigger: GAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGA...AGGTTCCAGCTGCTCAAATATACTTGCTGGAGAGGAAGGCCATGTTCCTCCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTAGAACTTCCTCAATTTaGAAGGTCACTCCAGTAAAG | + |
Preference number: 5 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIRTSSI*KVTPVK Trigger: CTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTACAAATCTGCAGCTTGTaGAAATCGCTCTCTAGCGAT | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLQICSL*KSLSSD Trigger: ATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTG...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAGTGAACTGTTGTTACTaGGGGCTGTCAAATCGATTC | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLVNCCY*GLSNRF Trigger: GAATCGATTTGACAGCCCCAAGTAACAACAGTTCAC...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGTGAACTGTTGTTACTaGGGGCTGTCAAATCGATTC | + |
Preference number: 5 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGVNCCY*GLSNRF Trigger: GAATCGATTTGACAGCCCCAAGTAACAACAGTTCAC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
||
CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTATCTCTTGGTGAACTGTaGTTACTTGGGGCTGTCAAA | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLSLGEL*LLGAVK Trigger: TTTGACAGCCCCAAGTAACAACAGTTCACCAAGAGA...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTATCATCTCTGAAGGGATaGAAATCGTCATCATCCCCA | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLSSLKG*KSSSSP Trigger: TGGGGATGATGACGATTTCAATCCCTTCAGAGATGA...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGGTTACAAGGCTGCTGTaGCTGTTGCTGTTACTGTTG | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKVTRLL*LLLLLL Trigger: CAACAGTAACAGCAACAGCAACAGCAGCCTTGTAAC...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCCACACACAGAACGAGGGGGCTGGCACCTTAGGACACAGAATCGTTCTCATTCATTTTCACATAGCTTaGAGAAAGAAGAACTTCCTC | + |
Preference number: 5 (lower is better) Translates to: IHTQNEGAGTLGHRIVLIHFHIA*RKKNFL Trigger: GAGGAAGTTCTTCTTTCTCAAAGCTATGTGAAAATG...AATGAGAACGATTCTGTGTCCTAAGGTGCCAGCCCCCTCGTTCTGTGTGTGGAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGACCACCCTTTTCACTTaGGATGCTATACACAGGTAC | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKTTLFT*DAIHRY Trigger: GTACCTGTGTATAGCATCCAAAGTGAAAAGGGTGGT...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGGGAGTTAGAAACTTCTaGACATCACTCTTCCTCACC | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKGVRNF*TSLFLT Trigger: GGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTCC...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AGCTGCAGCCATGACATGGAATGCTTGGTTCACTTCAGCACTAGAGGGCCAAAGGTTGCTTCCCAGTGTTaGGTCGGTAAATTAAAAATA | + |
Preference number: 5 (lower is better) Translates to: SCSHDMECLVHFSTRGPKVASQC*VGKLKI Trigger: TATTTTTAATTTACCGACCAAACACTGGGAAGCAAC...CTTTGGCCCTCTAGTGCTGAAGTGAACCAAGCATTCCATGTCATGGCTGCAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | TATCCATATCCTCGCCACTTCTTTATTAGAAGACTCCTTCTTAACTaGACCATTACTGACATCAGTAGCTGCAGTTGCAACTGGCTGAGC | + |
Preference number: 5 (lower is better) Translates to: YPYPRHFFIRRLLLN*TITDISSCSCNWLS Trigger: GCTCAGCCAGTTGCAACTGCAGCTACTGATGTCAGTAATGGTGCAGTTAAGAAGGAGTCTTCTAATAAAGAAGTGGCGAGGATATGGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS-3UTR CAA 90 bp | GAGCCCGTGTATAAAATACCCTTTGCACAAGGAGGTAGAACCCGGCACAAGTTTTCTGCGTTCCACAGCTaGGATAAAATCACTAAATTC | + |
Preference number: 5 (lower is better) Translates to: EPVYKIPFAQGGRTRHKFSAFHS*DKITKF Trigger: GAATTTAGTGATTTTATCCAAGCTGTGGAACGCAGA...AAACTTGTGCCGGGTTCTACCTCCTTGTGCAAAGGGTATTTTATACACGGGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTACTCTGTTTGCGCCATCAGCTTTGCTGCCTTTTTCCAGGTTTGTCCTTAAGAACTTCCTCAATTTaGAAGGTCACTCCAGTAAAG | + |
Preference number: 5 (lower is better) Translates to: PLLCLRHQLCCLFPGLSLRTSSI*KVTPVK Trigger: CTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT...TAAGGACAAACCTGGAAAAAGGCAGCAAAGCTGATGGCGCAAACAGAGTAGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: PLHLLSNASHSGPSANMENQICS*LKSLSS Trigger: GCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATT...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGCCTAAACTTGCTTTTTaGCAATTGCCACGCCAGTAT | + |
Preference number: 5 (lower is better) Translates to: LFTKKTREILQVLLWKHQPKLAF*QLPRQY Trigger: ATACTGGCGTGGCAATTGCAAAAAAGCAAGTTTAGG...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CATTCAGATGGACAGTCCTATGCAGCGCAGCAGTACAAAAGGGAACTGAAGACAACACTCCCATTGTGTTaGGAAGAAATCTTACCATAT | + |
Preference number: 5 (lower is better) Translates to: HSDGQSYAAQQYKRELKTTLPLC*EEILPY Trigger: ATATGGTAAGATTTCTTCCAAACACAATGGGAGTGT...TGTCTTCAGTTCCCTTTTGTACTGCTGCGCTGCATAGGACTGTCCATCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TTCCAAGACGGTTCATGTAGGCCATGTTGCGTGGTTCAGAAGCACCTAGTAAACACACTCCCATTGTGTTaGGAAGAAATCTTACCATAT | + |
Preference number: 5 (lower is better) Translates to: FQDGSCRPCCVVQKHLVNTLPLC*EEILPY Trigger: ATATGGTAAGATTTCTTCCAAACACAATGGGAGTGT...GTTTACTAGGTGCTTCTGAACCACGCAACATGGCCTACATGAACCGTCTTGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CAA 90 bp | AGAACTTCCTCAATTTTGAAGGTCACTCCAGTAAAGCTCAGCTGCCGTGCAATGAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT | + |
Preference number: 5 (lower is better) Translates to: RTSSILKVTPVKLSCRAMKQLWL*AICSEA Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...CATTGCACGGCAGCTGAGCTTTACTGGAGTGACCTTCAAAATTGAGGAAGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAAATCAAATCTGCAGCTaGTTGAAATCGCTCTCTAGC | + |
Preference number: 5 (lower is better) Translates to: KATNEPECMARNPSLHAVNQICS*LKSLSS Trigger: GCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CTGTTCACTAAGAAGACTAGAGAAATCCTGCAGGTGCTGCTTTGGAAACACCAGTACAAGGACTATCTCTaGGTGAACTGTTGTTACTTG | + |
Preference number: 5 (lower is better) Translates to: LFTKKTREILQVLLWKHQYKDYL*VNCCYL Trigger: CAAGTAACAACAGTTCACCAAGAGATAGTCCTTGTA...CTGGTGTTTCCAAAGCAGCACCTGCAGGATTTCTCTAGTCTTCTTAGTGAACAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAAGGCTACAGCCAAACTGTGGCTCCAAAATGCTTAATTCCTCTGGAGCTGGGGCATTTCTTCCATACTaGTTGTCAAAGTTGAATCTG | + |
Preference number: 5 (lower is better) Translates to: KRLQPNCGSKMLNSSGAGAFLPY*LSKLNL Trigger: CAGATTCAACTTTGACAACAAGTATGGAAGAAATGC...CCCAGCTCCAGAGGAATTAAGCATTTTGGAGCCACAGTTTGGCTGTAGCCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | ATACTTGTTGTCAAAGTTGAATCTGCTCAGATCTCTAGATTCTGTTaGTCTTCTGTCACCATGTGTAAGTGCCCCCAAACTCTCAAGTCT | + |
Preference number: 5 (lower is better) Translates to: ILVVKVESAQISRFC*SSVTMCKCPQTLKS Trigger: AGACTTGAGAGTTTGGGGGCACTTACACATGGTGACAGAAGAGCAACAGAATCTAGAGATCTGAGCAGATTCAACTTTGACAACAAGTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | ATCAATCAAATCTGCAGCTTGTTGAAATCGCTCTCTAGCGATAACCCACTGAAATGTCAAAGTGATGGTTaGCCTATTCGTTGTTGCAGG | + |
Preference number: 5 (lower is better) Translates to: INQICSLLKSLSSDNPLKCQSDG*PIRCCR Trigger: CCTGCAACAACGAATAGGCAAACCATCACTTTGACA...TTTCAGTGGGTTATCGCTAGAGAGCGATTTCAACAAGCTGCAGATTTGATTGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000199004.5 |
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CDS-3UTR CAA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTGTGAACTCTTCGCCTTaGGTTTTTAGCTCTCCGATC | + |
Preference number: 5 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFVNSSP*VFSSPI Trigger: GATCGGAGAGCTAAAAACCAAAGGCGAAGAGTTCAC...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TGTCAGATCAAGAAGGAAGCCCAGAGCCCGTGTATAAAATACCCTTTGCACAAGGCATTTCTTCCATACTaGTTGTCAAAGTTGAATCTG | + |
Preference number: 5 (lower is better) Translates to: CQIKKEAQSPCIKYPLHKAFLPY*LSKLNL Trigger: CAGATTCAACTTTGACAACAAGTATGGAAGAAATGC...CTTGTGCAAAGGGTATTTTATACACGGGCTCTGGGCTTCCTTCTTGATCTGACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | CCTCTTCACCTGCTTTCAAATGCAAGTCACAGTGGCCCTAGTGCTAATATGGAAGTTGCTTCCCAGTGTTaGGTCGGTAAATTAAAAATA | + |
Preference number: 5 (lower is better) Translates to: PLHLLSNASHSGPSANMEVASQC*VGKLKI Trigger: TATTTTTAATTTACCGACCAAACACTGGGAAGCAAC...TTCCATATTAGCACTAGGGCCACTGTGACTTGCATTTGAAAGCAGGTGAAGAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS GCA 90 bp | CGTGTGTTTGCAGTGGTCTGGATGAACTTTGTCAAAGTGATGGTTTaGCTATTCGTTGTTGCAGGTGGTGTTTTAGTCATTACAATTGTA | + |
Preference number: 5 (lower is better) Translates to: RVFAVVWMNFVKVMV*LFVVAGGVLVITIV Trigger: TACAATTGTAATGACTAAAACACCACCTGCAACAACGAATAGGCAAACCATCACTTTGACAAAGTTCATCCAGACCACTGCAAACACACG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000198420.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTAACACTCCCATTGTGTTaGGAAGAAATCTTACCATAT | + |
Preference number: 5 (lower is better) Translates to: KATNEPECMARNPSLHAVTLPLC*EEILPY Trigger: ATATGGTAAGATTTCTTCCAAACACAATGGGAGTGT...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | AAAGCTACAAATGAACCTGAATGCATGGCACGCAACCCTTCACTTCATGCTGTATACTTGTTGTCAAAGTaGAATCTGCTCAGATCTCTA | + |
Preference number: 5 (lower is better) Translates to: KATNEPECMARNPSLHAVYLLSK*NLLRSL Trigger: TAGAGATCTGAGCAGATTCAACTTTGACAACAAGTA...TACAGCATGAAGTGAAGGGTTGCGTGCCATGCATTCAGGTTCATTTGTAGCTTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTGAGACTGGTCTGAAGTaGACAGGAGATTTACAAGAG | + |
Preference number: 5 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFETGLK*TGDLQE Trigger: CTCTTGTAAATCTCCTGTCAACTTCAGACCAGTCTC...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS TCA 90 bp | TTGCCGAACGTCTTTAAAGAATTCTCCAGGGTAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAAGTTTACAATGGATTTCATAACAAT | + |
Preference number: 5 (lower is better) Translates to: LPNVFKEFSRVVWRW*YHRRIQVYNGFHNN Trigger: ATTGTTATGAAATCCATTGTAAACTTGGATTCTCCTATGGTATCACCACCTCCAGACTACCCTGGAGAATTCTTTAAAGACGTTCGGCAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 90 bp | TTCATGAGTTCGTTTAAACTATTATTTTTGAGTAAATCCTTTAGCTaGACCTGGTCTTTTGAAGGAGCAGCGGGCATGGCATTTCGTACT | + |
Preference number: 5 (lower is better) Translates to: FMSSFKLLFLSKSFS*TWSFEGAAGMAFRT Trigger: AGTACGAAATGCCATGCCCGCTGCTCCTTCAAAAGACCAGGTTCAGCTAAAGGATTTACTCAAAAATAATAGTTTAAACGAACTCATGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 9 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000198420.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS-3UTR CAA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCT | + |
Preference number: 5 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFKQLWL*AICSEA Trigger: AGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS-3UTR CAA 90 bp | TATTCAAGTTACTGGGTAACGATGACAACAACATACAGCAGAAGCCAAGTGTTTACTTTTCGTGCTTTTTaGGCTTCTCGAGTGATTTCT | + |
Preference number: 5 (lower is better) Translates to: YSSYWVTMTTTYSRSQVFTFRAF*ASRVIS Trigger: AGAAATCACTCGAGAAGCCAAAAAAGCACGAAAAGT...AAACACTTGGCTTCTGCTGTATGTTGTTGTCATCGTTACCCAGTAACTTGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065263.12 ENSMUST00000199808.5 |
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CDS CCA 90 bp | TGTTGCAGGTGGTGTTTTAGTCATTACAATTGTAGATCCCAAAGTTaGAAGTTGATTTATTTGATTCAGCACAAACGTTGTAGTGGATGG | + |
Preference number: 5 (lower is better) Translates to: CCRWCFSHYNCRSQS*KLIYLIQHKRCSGW Trigger: CCATCCACTACAACGTTTGTGCTGAATCAAATAAATCAACTTCCAACTTTGGGATCTACAATTGTAATGACTAAAACACCACCTGCAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000198420.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS TCA 72 bp | AGCACAAACGTTGTAGTGGATGGAGGCTGCTGCTGTTaGACTGAAGGGGGCGTAGGGGTGGCAAGGCCAGCA | + |
Preference number: 6 (lower is better) Translates to: STNVVVDGGCCC*TEGGVGVARPA Trigger: TGCTGGCCTTGCCACCCCTACGCCCCCTTCAGTTCAACAGCAGCAGCCTCCATCCACTACAACGTTTGTGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000196329.5 ENSMUST00000196711.5 |
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CDS TCA 72 bp | CACAAACGTTGTAGTGGATGGAGGCTGCTGTTGAACTaGAGGGGGCGTAGGGGTGGCAAGGCCAGCATCTCC | + |
Preference number: 6 (lower is better) Translates to: HKRCSGWRLLLN*RGRRGGKASIS Trigger: GGAGATGCTGGCCTTGCCACCCCTACGCCCCCTTCAGTTCAACAGCAGCCTCCATCCACTACAACGTTTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198420.5 ENSMUST00000200474.5 |
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CDS TCA 72 bp | TTCAGCACAAACGTTGTAGTGGATGGAGGCTGCTGTTaGACTGAAGGGGGCGTAGGGGTGGCAAGGCCAGCA | + |
Preference number: 6 (lower is better) Translates to: FSTNVVVDGGCC*TEGGVGVARPA Trigger: TGCTGGCCTTGCCACCCCTACGCCCCCTTCAGTTCAACAGCAGCCTCCATCCACTACAACGTTTGTGCTGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000198420.5 ENSMUST00000200474.5 |
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CDS CAA 90 bp | ACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGCTGGTGCACTGTaGGAAGCAGGCGAGATGACTGGTGCAGAGGAGAAACTAGGCCGC | + |
Preference number: 6 (lower is better) Translates to: TRLLLLLLLLLAGAL*EAGEMTGAEEKLGR Trigger: GCGGCCTAGTTTCTCCTCTGCACCAGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | AACCCTAGTTCTAATGCACTAAGTGGCACCGACTGTTaGACTGAAGGGGGCGTAGGGGTGGCAAGGCCAGCA | + |
Preference number: 6 (lower is better) Translates to: NPSSNALSGTDC*TEGGVGVARPA Trigger: TGCTGGCCTTGCCACCCCTACGCCCCCTTCAGTTCAACAGTCGGTGCCACTTAGTGCATTAGAACTAGGGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 6 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000197777.2 ENSMUST00000199004.5 ENSMUST00000199808.5 |
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CDS GCA 72 bp | CAGACCTCGACTCGTAGGATATGCTTCCGTCATCATTaGTCACTACCCGCCCTTTGCGGCCAGTCATCTCAG | + |
Preference number: 6 (lower is better) Translates to: QTSTRRICFRHH*SLPALCGQSSQ Trigger: CTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAGCAATGATGACGGAAGCATATCCTACGAGTCGAGGTCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | CAGAACACCTTCCACTTTTGTCCAGACGCTCAGTACTaGGCCACACAGTACATAGTACGTGCGGCAGCGGAG | + |
Preference number: 6 (lower is better) Translates to: QNTFHFCPDAQY*ATQYIVRAAAE Trigger: CTCCGCTGCCGCACGTACTATGTACTGTGTGGCTCAGTACTGAGCGTCTGGACAAAAGTGGAAGGTGTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | ATCCGCTGCCCATCTTCGGTCCTTAGCCGCACTATCTaGATTTTCACATTTGTGCCGCTGACAGAGGCCAGA | + |
Preference number: 6 (lower is better) Translates to: IRCPSSVLSRTI*IFTFVPLTEAR Trigger: TCTGGCCTCTGTCAGCGGCACAAATGTGAAAATGCAGATAGTGCGGCTAAGGACCGAAGATGGGCAGCGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | GCGCCCTTTCGACAGCATCTTGACTTGTTACAAGGCTaGTGTTGCTGTTGCTGTTACTGTTGGCTGGTGCAC | + |
Preference number: 6 (lower is better) Translates to: APFRQHLDLLQG*CCCCCYCWLVH Trigger: GTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | ATATGCTTCCGTCATCATTGCTCACTACCCGCCCTTTaGGGCCAGTCATCTCAGCCACATTTTCAGGACCAC | + |
Preference number: 6 (lower is better) Translates to: ICFRHHCSLPAL*GQSSQPHFQDH Trigger: GTGGTCCTGAAAATGTGGCTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAGCAATGATGACGGAAGCATAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | GCAATTGCCACGCCAGTATGCGTGAGTACAGGTGTCTaGAGAGGAGTTATACTGATCCAGCCAGTGTACCAG | + |
Preference number: 6 (lower is better) Translates to: AIATPVCVSTGV*RGVILIQPVYQ Trigger: CTGGTACACTGGCTGGATCAGTATAACTCCTCTGCAGACACCTGTACTCACGCATACTGGCGTGGCAATTGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CCA 72 bp | TTAGCTGAACCTGGTCTTTTGAAGGAGCAGCGGGCATaGCATTTCGTACTGCTGGTGCTGAAACTGAAGGGC | + |
Preference number: 6 (lower is better) Translates to: LAEPGLLKEQRA*HFVLLVLKLKG Trigger: GCCCTTCAGTTTCAGCACCAGCAGTACGAAATGCCATGCCCGCTGCTCCTTCAAAAGACCAGGTTCAGCTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 9 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000198420.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS CAA 72 bp | CTGTTGCTGTTGCTGTTACTGTTGGCTGGTGCACTGTaGGAAGCAGGCGAGATGACTGGTGCAGAGGAGAAA | + |
Preference number: 6 (lower is better) Translates to: LLLLLLLLAGAL*EAGEMTGAEEK Trigger: TTTCTCCTCTGCACCAGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | GATATGCTTCCGTCATCATTGCTCACTACCCGCCCTTaGCGGCCAGTCATCTCAGCCACATTTTCAGGACCA | + |
Preference number: 6 (lower is better) Translates to: DMLPSSLLTTRP*RPVISATFSGP Trigger: TGGTCCTGAAAATGTGGCTGAGATGACTGGCCGCAAAGGGCGGGTAGTGAGCAATGATGACGGAAGCATATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | GTTGCTCAAGTTGGTGATGCTCTGTGGGTGATGCTGTaGCCACAGCTGTTTTTGTTGCACTGCGAGCTGCTG | + |
Preference number: 6 (lower is better) Translates to: VAQVGDALWVML*PQLFLLHCELL Trigger: CAGCAGCTCGCAGTGCAACAAAAACAGCTGTGGCAACAGCATCACCCACAGAGCATCACCAACTTGAGCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | ACACACTTCCCGTTCTTGATCTCTTCCCGAGCCAGCTaGACCACCCTTTTCACTTTGGATGCTATACACAGG | + |
Preference number: 6 (lower is better) Translates to: THFPFLISSRAS*TTLFTLDAIHR Trigger: CCTGTGTATAGCATCCAAAGTGAAAAGGGTGGTGCAGCTGGCTCGGGAAGAGATCAAGAACGGGAAGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS GCA 72 bp | ATCATCTGGTCCAGTCAGCTCTGCCCAAATCTTGGTTaGTTCCTCCCAGGACATTCCCCTCTCCACACTAAT | + |
Preference number: 6 (lower is better) Translates to: IIWSSQLCPNLG*FLPGHSPLHTN Trigger: ATTAGTGTGGAGAGGGGAATGTCCTGGGAGGAAGCAACCAAGATTTGGGCAGAGCTGACTGGACCAGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | CTTGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTaGGCTGGTGCACTGTTGGAAGCAGGCGAGATGACT | + |
Preference number: 6 (lower is better) Translates to: LVTRLLLLLLLL*AGALLEAGEMT Trigger: AGTCATCTCGCCTGCTTCCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 90 bp | GCAGGTCTTTCTTCATCTGTTGCGCCCTTTCGACAGCATCTTGACTaGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGCTGGTG | + |
Preference number: 6 (lower is better) Translates to: AGLSSSVAPFRQHLD*LQGCCCCCCYCWLV Trigger: CACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGCAACAGATGAAGAAAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | CTCCTTCTTAACTGCACCATTACTGACATCAGTAGCTaGAGTTGCAACTGGCTGAGCAATATTGGCGGGTGG | + |
Preference number: 6 (lower is better) Translates to: LLLNCTITDISS*SCNWLSNIGGW Trigger: CCACCCGCCAATATTGCTCAGCCAGTTGCAACTGCAGCTACTGATGTCAGTAATGGTGCAGTTAAGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS TCA 72 bp | GGCCGGAGGTTGAATACCCTGGAGTTAGAAACTTCTTaGCATCACTCTTCCTCACCTTCTCATCTCCAGAAC | + |
Preference number: 6 (lower is better) Translates to: GRRLNTLELETS*HHSSSPSHLQN Trigger: GTTCTGGAGATGAGAAGGTGAGGAAGAGTGATGTCAAGAAGTTTCTAACTCCAGGGTATTCAACCTCCGGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | TTAGCCGCACTATCTGCATTTTCACATTTGTGCCGCTaGCAGAGGCCAGAACACCTTCCACTTTTGTCCAGA | + |
Preference number: 6 (lower is better) Translates to: LAALSAFSHLCR*QRPEHLPLLSR Trigger: TCTGGACAAAAGTGGAAGGTGTTCTGGCCTCTGTCAGCGGCACAAATGTGAAAATGCAGATAGTGCGGCTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | TTTCGACAGCATCTTGACTTGTTACAAGGCTGCTGTTaGTGTTGCTGTTACTGTTGGCTGGTGCACTGTTGG | + |
Preference number: 6 (lower is better) Translates to: FRQHLDLLQGCC*CCCYCWLVHCW Trigger: CCAACAGTGCACCAGCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | CTGCTTCCTGTGAGGCCACCAACTTTTCGTGCTTTTTaGGCTTCTCGAGTGATTTCTTCACCTTTCCGCTTC | + |
Preference number: 6 (lower is better) Translates to: LLPVRPPTFRAF*ASRVISSPFRF Trigger: GAAGCGGAAAGGTGAAGAAATCACTCGAGAAGCCAAAAAAGCACGAAAAGTTGGTGGCCTCACAGGAAGCAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS CAA 90 bp | ATCAAGCAGGTCTTTCTTCATCTGTTGCGCCCTTTCGACAGCATCTaGACTTGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGTTGGC | + |
Preference number: 6 (lower is better) Translates to: IKQVFLHLLRPFDSI*TCYKAAVAVAVTVG Trigger: GCCAACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGCAACAGATGAAGAAAGACCTGCTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | TGTTGCCACAGCTGTTTTTGTTGCACTGCGAGCTGCTaGGACTGGTCTGAAGTTGACAGGAGATTTACAAGA | + |
Preference number: 6 (lower is better) Translates to: CCHSCFCCTASC*DWSEVDRRFTR Trigger: TCTTGTAAATCTCCTGTCAACTTCAGACCAGTCTCAGCAGCTCGCAGTGCAACAAAAACAGCTGTGGCAACA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | TCTTCATCTGTTGCGCCCTTTCGACAGCATCTTGACTaGTTACAAGGCTGCTGTTGCTGTTGCTGTTACTGT | + |
Preference number: 6 (lower is better) Translates to: SSSVAPFRQHLD*LQGCCCCCCYC Trigger: ACAGTAACAGCAACAGCAACAGCAGCCTTGTAACAAGTCAAGATGCTGTCGAAAGGGCGCAACAGATGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CCA 72 bp | ATTCCCCTCTCCACACTAATCGTGTATAACTCTACATaGCCGGAGGTTGAATACCCTGGAGTTAGAAACTTC | + |
Preference number: 6 (lower is better) Translates to: IPLSTLIVYNST*PEVEYPGVRNF Trigger: GAAGTTTCTAACTCCAGGGTATTCAACCTCCGGCCATGTAGAGTTATACACGATTAGTGTGGAGAGGGGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | GCCCTATCAGCACTCCAAGGTAATTCTAAAGTCATGTaGACTCTTCGCCTTTGGTTTTTAGCTCTCCGATCT | + |
Preference number: 6 (lower is better) Translates to: ALSALQGNSKVM*TLRLWFLALRS Trigger: AGATCGGAGAGCTAAAAACCAAAGGCGAAGAGTTCACATGACTTTAGAATTACCTTGGAGTGCTGATAGGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS TCA 72 bp | GTCACTTGGTTTGACCTGTGTGTTCTTCCAAACTGCTaGATCGCCCTATCAGCACTCCAAGGTAATTCTAAA | + |
Preference number: 6 (lower is better) Translates to: VTWFDLCVLPNC*IALSALQGNSK Trigger: TTTAGAATTACCTTGGAGTGCTGATAGGGCGATTCAGCAGTTTGGAAGAACACACAGGTCAAACCAAGTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS GCA 72 bp | CCTCGCCACTTCTTTATTAGAAGACTCCTTCTTAACTaGACCATTACTGACATCAGTAGCTGCAGTTGCAAC | + |
Preference number: 6 (lower is better) Translates to: PRHFFIRRLLLN*TITDISSCSCN Trigger: GTTGCAACTGCAGCTACTGATGTCAGTAATGGTGCAGTTAAGAAGGAGTCTTCTAATAAAGAAGTGGCGAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196329.5 ENSMUST00000196644.5 ENSMUST00000196711.5 ENSMUST00000199004.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS GCA 72 bp | GTCAAAGTTGAATCTGCTCAGATCTCTAGATTCTGTTaGTCTTCTGTCACCATGTGTAAGTGCCCCCAAACT | + |
Preference number: 6 (lower is better) Translates to: VKVESAQISRFC*SSVTMCKCPQT Trigger: AGTTTGGGGGCACTTACACATGGTGACAGAAGAGCAACAGAATCTAGAGATCTGAGCAGATTCAACTTTGAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | ATCCTCTACATTAATCAAGCCCACTCCTATCAGTCCTaGCCGAACGTCTTTAAAGAATTCTCCAGGGTAGTC | + |
Preference number: 6 (lower is better) Translates to: ILYINQAHSYQS*PNVFKEFSRVV Trigger: GACTACCCTGGAGAATTCTTTAAAGACGTTCGGCAAGGACTGATAGGAGTGGGCTTGATTAATGTAGAGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | ACTTACCAGTGGCACTGGCATAAACAACTCTGGCTTTaGGCAATTTGTTCTGAAGCTCTAAAACAGCCAAGC | + |
Preference number: 6 (lower is better) Translates to: TYQWHWHKQLWL*AICSEALKQPS Trigger: GCTTGGCTGTTTTAGAGCTTCAGAACAAATTGCCAAAAGCCAGAGTTGTTTATGCCAGTGCCACTGGTAAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200674.2 |
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CDS CAA 90 bp | TTTAGTCATTACAATTGTAGATCCCAAAGTTGGAAGTTGATTTATTaGATTCAGCACAAACGTTGTAGTGGATGGAGGCTGCTGCCTCAC | + |
Preference number: 6 (lower is better) Translates to: FSHYNCRSQSWKLIY*IQHKRCSGWRLLPH Trigger: GTGAGGCAGCAGCCTCCATCCACTACAACGTTTGTGCTGAATCAAATAAATCAACTTCCAACTTTGGGATCTACAATTGTAATGACTAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065263.12 ENSMUST00000196644.5 ENSMUST00000199004.5 ENSMUST00000199808.5 |
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CDS TCA 72 bp | GTCTTTAAAGAATTCTCCAGGGTAGTCTGGAGGTGGTaGTACCATAGGAGAATCCAAGTTTACAATGGATTT | + |
Preference number: 6 (lower is better) Translates to: VFKEFSRVVWRW*YHRRIQVYNGF Trigger: AAATCCATTGTAAACTTGGATTCTCCTATGGTATCACCACCTCCAGACTACCCTGGAGAATTCTTTAAAGAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | TTATGGTCTTTCCTAATTAACCACGGATCATCCTCATaGTCTTCACTGGACTCATCTCTGAAGGGATTGAAA | + |
Preference number: 6 (lower is better) Translates to: LWSFLINHGSSS*SSLDSSLKGLK Trigger: TTTCAATCCCTTCAGAGATGAGTCCAGTGAAGACAATGAGGATGATCCGTGGTTAATTAGGAAAGACCATAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS CAA 90 bp | TTTAGTCATTACAATTGTAGATCCCAAAGTTGGAAGTTGATTTATTaGATTCAGCACAAACGTTGTAGTGGATGGAGGCTGCTGCTGTTG | + |
Preference number: 6 (lower is better) Translates to: FSHYNCRSQSWKLIY*IQHKRCSGWRLLLL Trigger: CAACAGCAGCAGCCTCCATCCACTACAACGTTTGTGCTGAATCAAATAAATCAACTTCCAACTTTGGGATCTACAATTGTAATGACTAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000196329.5 ENSMUST00000196711.5 |
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CDS GCA 72 bp | ATAATAGCAATATTCTTGTCTCCATCCATGAACCTTTaGTTCTCTGTGATGTTTAGAATCTCCACAGGCACA | + |
Preference number: 6 (lower is better) Translates to: IIAIFLSPSMNL*FSVMFRISTGT Trigger: TGTGCCTGTGGAGATTCTAAACATCACAGAGAAGCAAAGGTTCATGGATGGAGACAAGAATATTGCTATTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000199808.5 |
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CDS CAA 72 bp | CTTTACAAGGACTATCTCTTGGTGAACTGTTGTTACTaGGGGCTGTCAAATCGATTCCTAGCAAACTATAAA | + |
Preference number: 6 (lower is better) Translates to: LYKDYLLVNCCY*GLSNRFLANYK Trigger: TTTATAGTTTGCTAGGAATCGATTTGACAGCCCCAAGTAACAACAGTTCACCAAGAGATAGTCCTTGTAAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |
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CDS CAA 90 bp | TTTAGTCATTACAATTGTAGATCCCAAAGTTGGAAGTTGATTTATTaGATTCAGCACAAACGTTGTAGTGGATGGAGGCTGCCTCACATT | + |
Preference number: 6 (lower is better) Translates to: FSHYNCRSQSWKLIY*IQHKRCSGWRLPHI Trigger: AATGTGAGGCAGCCTCCATCCACTACAACGTTTGTGCTGAATCAAATAAATCAACTTCCAACTTTGGGATCTACAATTGTAATGACTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168651.6 |
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CDS CAA 90 bp | TTTAGTCATTACAATTGTAGATCCCAAAGTTGGAAGTTGATTTATTaGATTCAGCACAAACGTTGTAGTGGATGGAGGCTGCTGTTGAAC | + |
Preference number: 6 (lower is better) Translates to: FSHYNCRSQSWKLIY*IQHKRCSGWRLLLN Trigger: GTTCAACAGCAGCCTCCATCCACTACAACGTTTGTGCTGAATCAAATAAATCAACTTCCAACTTTGGGATCTACAATTGTAATGACTAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000198420.5 ENSMUST00000200474.5 |
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CDS CAA 72 bp | TTATTTTCTTTACAAGGACTATCTCTTGGTGAACTGTaGTTACTTGGGGCTGTCAAATCGATTCCTAGCAAA | + |
Preference number: 6 (lower is better) Translates to: LFSLQGLSLGEL*LLGAVKSIPSK Trigger: TTTGCTAGGAATCGATTTGACAGCCCCAAGTAACAACAGTTCACCAAGAGATAGTCCTTGTAAAGAAAATAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000065263.12 ENSMUST00000168651.6 ENSMUST00000196644.5 ENSMUST00000199808.5 ENSMUST00000200474.5 |