Pregenerated sensors for SBK2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030433Ensembl transcript IDs: ENSMUST00000032598.14, ENSMUST00000182214.8, ENSMUST00000183170.2, ENSMUST00000208109.2
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGAGGTGGGTGGGATGGTGCAGAGCTATGCCGGACAGCAGAGCATaGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGG | + |
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Preference number: 1 (lower is better) Translates to: LRWVGWCRAMPDSRA*CMPAIPGLRKLRQG Trigger: CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTCTGCACCATCCCACCCACCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR GCA 90 bp | AGGTGGGTGGGATGGTGCAGAGCTATGCCGGACAGCAGAGCATGGTaGATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: RWVGWCRAMPDSRAW*MPAIPGLRKLRQGD Trigger: ATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTCTGCACCATCCCACCCACCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR GCA 90 bp | GGGATGGTGCAGAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTaGTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTT | + |
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Preference number: 1 (lower is better) Translates to: GMVQSYAGQQSMVHA*YSRTQEAKAGGFRV Trigger: AACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTCTGCACCATCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR CCA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTaGAATCCCAGAATGCAGGTGAGTAAGCAGCAACAAAAGCCAGAG | + |
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Preference number: 1 (lower is better) Translates to: FICREQLGKCTSLKG*NPRMQVSKQQQKPE Trigger: CTCTGGCTTTTGTTGCTGCTTACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR CCA 90 bp | ATAAACCTGGGAGATAGCTCTGTCTCTGTCTCCCTACCACCGGGATaGCATACCCAGCTTTATATTTTCTTTAAATGTGTGCTCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: INLGDSSVSVSLPPG*HTQLYIFFKCVLWG Trigger: GCCCCAGAGCACACATTTAAAGAAAATATAAAGCTGGGTATGCCATCCCGGTGGTAGGGAGACAGAGACAGAGCTATCTCCCAGGTTTAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR CCA 90 bp | CCGGGATGGCATACCCAGCTTTATATTTTCTTTAAATGTGTGCTCTaGGGCTCACACTCCGTTCCTTGTGTTTGCAAAACAAGTAATTTA | + |
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Preference number: 1 (lower is better) Translates to: PGWHTQLYIFFKCVL*GSHSVPCVCKTSNL Trigger: TAAATTACTTGTTTTGCAAACACAAGGAACGGAGTGTGAGCCCCAGAGCACACATTTAAAGAAAATATAAAGCTGGGTATGCCATCCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAGGGTTGTGAAGTTCAGAGCAGGTGGCCATTTTACCTGGGTTTGTGGGGAAAGGTGGGTGGGATGGTaGAGAGCTATGCCGGACAGC | + |
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Preference number: 2 (lower is better) Translates to: PRVVKFRAGGHFTWVCGERWVGW*RAMPDS Trigger: GCTGTCCGGCATAGCTCTGCACCATCCCACCCACCT...TTCCCCACAAACCCAGGTAAAATGGCCACCTGCTCTGAACTTCACAACCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR TCA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCTGGAGCGAAGCCACATaGGAGAAGATGGGAGACAGG | + |
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Preference number: 2 (lower is better) Translates to: FICREQLGKCTSLKGWNPWSEAT*EKMGDR Trigger: CCTGTCTCCCATCTTCTCTCATGTGGCTTCGCTCCA...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR GCA 90 bp | TGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCCCAGGCTTTTCTTTAAATGTGTaGTCTGGGGCTCACACTCCG | + |
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Preference number: 2 (lower is better) Translates to: CGQCVWRREDNIWCYSPGFSLNV*SGAHTP Trigger: CGGAGTGTGAGCCCCAGAGCACACATTTAAAGAAAA...GCCTGGGGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR-3UTR GCA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCGCAGAGCATGGTGCATaGCTGCTATTCCAGGACTCA | + |
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Preference number: 2 (lower is better) Translates to: FICREQLGKCTSLKGWNPAEHGA*LLFQDS Trigger: TGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGC...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR TCA 90 bp | TTACCTGGGTTTGTGGGGAAGGTAGCTGAGGTGGGTGGGATGGTGCAGAGCTATAACACACAGGACAGATaGGAGATAGATAGAGCGAAA | + |
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Preference number: 2 (lower is better) Translates to: LPGFVGKVAEVGGMVQSYNTQDR*EIDRAK Trigger: TTTCGCTCTATCTATCTCTCATCTGTCCTGTGTGTT...ATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR TCA 90 bp | TTACCTGGGTTTGTGGGGAAGGTAGCTGAGGTGGGTGGGATGGTGCAGAGCTATCTGCTAAAAGTCCTCTaGTTTACACACAGCACTTTA | + |
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Preference number: 2 (lower is better) Translates to: LPGFVGKVAEVGGMVQSYLLKVL*FTHSTL Trigger: TAAAGTGCTGTGTGTAAATCAGAGGACTTTTAGCAG...ATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR GCA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCGTCTATTCATTTGGTTaGTGCTGCAGGCTGGGCATT | + |
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Preference number: 2 (lower is better) Translates to: FICREQLGKCTSLKGWNPVYSFG*CCRLGI Trigger: AATGCCCAGCCTGCAGCAGCAACCAAATGAATAGAC...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR CCA 90 bp | CAGAAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGGGCTGGGCTCCAAGGTaGAAGGAGAGGACTGACTGC | + |
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Preference number: 2 (lower is better) Translates to: QKISGQLVKDTKVHRSTEGWAPR*KERTDC Trigger: GCAGTCAGTCCTCTCCTTCCACCTTGGAGCCCAGCC...CTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR TCA 90 bp | CCCCAGGCACTATCTAAACCTTGTTTTTATGAGACAATGGCCTTGAAGCTCAACAGTTCAGGCAAGCCTTaGACTCTGAGTGGTAGGATT | + |
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Preference number: 2 (lower is better) Translates to: PQALSKPCFYETMALKLNSSGKP*TLSGRI Trigger: AATCCTACCACTCAGAGTTCAAGGCTTGCCTGAACT...GTTGAGCTTCAAGGCCATTGTCTCATAAAAACAAGGTTTAGATAGTGCCTGGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR-3UTR CCA 90 bp | GCTATTCCCCAGGCACTATCTAAACCTTGTTTTTATGAGACAATGGCCTTGAAGTACCATAGCCTAAGCTaGCTTGGAAGTCACTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: AIPQALSKPCFYETMALKYHSLS*LGSHCV Trigger: TACACAGTGACTTCCAAGCCAGCTTAGGCTATGGTA...CTTCAAGGCCATTGTCTCATAAAAACAAGGTTTAGATAGTGCCTGGGGAATAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR-3UTR TCA 90 bp | AAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGAAGGTAGCTAAAGGCACTTaGAGGCTTATAAGAATTCCA | + |
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Preference number: 2 (lower is better) Translates to: KISGQLVKDTKVHRSTEKVAKGT*RLIRIP Trigger: TGGAATTCTTATAAGCCTTCAAGTGCCTTTAGCTAC...CTTCTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR TCA 72 bp | GGTGGCCATTTTACCTGGGTTTGTGGGGAAGGTAGCTaGGGTGGGTGGGATGGTGCAGAGCTATGCCGGACA | + |
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Preference number: 3 (lower is better) Translates to: GGHFTWVCGEGS*GGWDGAELCRT Trigger: TGTCCGGCATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAAAATGGCCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR GCA 72 bp | CAGAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTaGTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: QSYAGQQSMVHA*YSRTQEAKAGG Trigger: TCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR CCA 72 bp | GTGGGATGGTGCAGAGCTATGCCGGACAGCAGAGCATaGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTA | + |
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Preference number: 3 (lower is better) Translates to: VGWCRAMPDSRA*CMPAIPGLRKL Trigger: TAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTCTGCACCATCCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR CAA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCGCTGCAGGCTGGGCATaGCTCAGAGATGTAGGGTCA | + |
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Preference number: 3 (lower is better) Translates to: FICREQLGKCTSLKGWNPAAGWA*LRDVGS Trigger: TGACCCTACATCTCTGAGCAATGCCCAGCCTGCAGC...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR CAA 90 bp | CAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTGAGTGATGTGTCTATTCATTaGGTTGCTGCTGCAGGCTGG | + |
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Preference number: 3 (lower is better) Translates to: QLGKCTSLKGWNPRMQVSDVSIH*VAAAGW Trigger: CCAGCCTGCAGCAGCAACCAAATGAATAGACACATC...ACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR CCA 72 bp | TCAGTTGCCAGGGGAACTTTATTTGCAGAGAGCAGCTaGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCA | + |
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Preference number: 3 (lower is better) Translates to: SVARGTLFAESS*ASVPHSKGGIP Trigger: TGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAAGTTCCCCTGGCAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR TCA 72 bp | CAGGTGAGTAAGCAGCAACAAAAGCCAGAGCAGATTTaGGTGGAGCGAAGCCACATGAGAGAAGATGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: QVSKQQQKPEQI*VERSHMREDGR Trigger: TCTCCCATCTTCTCTCATGTGGCTTCGCTCCACTCAAATCTGCTCTGGCTTTTGTTGCTGCTTACTCACCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR GCA 72 bp | ATGCTGACCAGATGTGTCTATTCATTTGGTTGCTGCTaGAGGCTGGGCATTGCTCAGAGATGTAGGGTCAGT | + |
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Preference number: 3 (lower is better) Translates to: MLTRCVYSFGCC*RLGIAQRCRVS Trigger: ACTGACCCTACATCTCTGAGCAATGCCCAGCCTGCAGCAGCAACCAAATGAATAGACACATCTGGTCAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR TCA 72 bp | GTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTaGGTAAGCAGCAACAAAAGCCAGAGCAGATTTGAG | + |
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Preference number: 3 (lower is better) Translates to: VPHSKGGIPECR*VSSNKSQSRFE Trigger: CTCAAATCTGCTCTGGCTTTTGTTGCTGCTTACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR-3UTR CAA 90 bp | GGCGAGAGGACAACATCTGGTGCTATTCCCCAGGCACTATCTAAACCTTGTTTTAATGCCATTCACTCGTaGTACTGGGATGATGTGTGC | + |
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Preference number: 3 (lower is better) Translates to: GERTTSGAIPQALSKPCFNAIHS*YWDDVC Trigger: GCACACATCATCCCAGTACAACGAGTGAATGGCATT...AAAACAAGGTTTAGATAGTGCCTGGGGAATAGCACCAGATGTTGTCCTCTCGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR GCA 72 bp | TGTGTGCTCTGGGGCTCACACTCCGTTCCTTGTGTTTaGAAAACAAGTAATTTACAAACTGAGCTATCTCCC | + |
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Preference number: 3 (lower is better) Translates to: CVLWGSHSVPCV*KTSNLQTELSP Trigger: GGGAGATAGCTCAGTTTGTAAATTACTTGTTTTGCAAACACAAGGAACGGAGTGTGAGCCCCAGAGCACACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR CCA 72 bp | GGAGATAGCTCTGTCTCTGTCTCCCTACCACCGGGATaGCATACCCAGCTTTATATTTTCTTTAAATGTGTG | + |
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Preference number: 3 (lower is better) Translates to: GDSSVSVSLPPG*HTQLYIFFKCV Trigger: CACACATTTAAAGAAAATATAAAGCTGGGTATGCCATCCCGGTGGTAGGGAGACAGAGACAGAGCTATCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR GCA 72 bp | GATGGCATACCCAGCTTTATATTTTCTTTAAATGTGTaGTCTGGGGCTCACACTCCGTTCCTTGTGTTTGCA | + |
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Preference number: 3 (lower is better) Translates to: DGIPSFIFSLNV*SGAHTPFLVFA Trigger: TGCAAACACAAGGAACGGAGTGTGAGCCCCAGAGCACACATTTAAAGAAAATATAAAGCTGGGTATGCCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| 3UTR CCA 72 bp | CATACCCAGCTTTATATTTTCTTTAAATGTGTGCTCTaGGGCTCACACTCCGTTCCTTGTGTTTGCAAAACA | + |
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Preference number: 3 (lower is better) Translates to: HTQLYIFFKCVL*GSHSVPCVCKT Trigger: TGTTTTGCAAACACAAGGAACGGAGTGTGAGCCCCAGAGCACACATTTAAAGAAAATATAAAGCTGGGTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR GCA 90 bp | AGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGCAGCCTCCTGCCCCTaGTGCAGCTCCTCTACCGTT | + |
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Preference number: 4 (lower is better) Translates to: SRAWCMPAIPGLRKLRQGAASCP*CSSSTV Trigger: AACGGTAGAGGAGCTGCAGCAGGGGCAGGAGGCTGC...CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | TGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCCCAGGCGCAGCCTCCTGCCCCTaGTGCAGCTCCTCTACCGTT | + |
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Preference number: 4 (lower is better) Translates to: CGQCVWRREDNIWCYSPGAASCP*CSSSTV Trigger: AACGGTAGAGGAGCTGCAGCAGGGGCAGGAGGCTGC...GCCTGGGGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CCA 90 bp | TTACCTGGGTTTGTGGGGAAGGTAGCTGAGGTGGGTGGGATGGTGCAGAGCTATAGGGCAGAGGCCAGTTaGGCTGCACAGCGCTGGGCT | + |
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Preference number: 4 (lower is better) Translates to: LPGFVGKVAEVGGMVQSYRAEAS*AAQRWA Trigger: AGCCCAGCGCTGTGCAGCCCAACTGGCCTCTGCCCT...ATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | CAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTGAGTAGAGGCCAGTTGGGCTaGACAGCGCTGGGCTGCTGG | + |
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Preference number: 4 (lower is better) Translates to: QLGKCTSLKGWNPRMQVSRGQLG*TALGCW Trigger: CCAGCAGCCCAGCGCTGTGCAGCCCAACTGGCCTCT...ACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTGAGTCCTCGGGGCCGGGTGTaGCCGAAGTCTGTCAGCTTG | + |
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Preference number: 4 (lower is better) Translates to: QLGKCTSLKGWNPRMQVSPRGRV*PKSVSL Trigger: CAAGCTGACAGACTTCGGCCACACCCGGCCCCGAGG...ACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR TCA 90 bp | CCTAGGGTTGTGAAGTTCAGAGCAGGTGGCCATTTTACCTGGGTTTGTGGGGAAGGCCGGTCTTGGGGCTaGCCAGAAGCCTGCCAGATG | + |
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Preference number: 4 (lower is better) Translates to: PRVVKFRAGGHFTWVCGEGRSWG*PEACQM Trigger: CATCTGGCAGGCTTCTGGTCAGCCCCAAGACCGGCC...TTCCCCACAAACCCAGGTAAAATGGCCACCTGCTCTGAACTTCACAACCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | TGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTTATGGGCTGCACAGCGCTaGGCTGCTGGCTGTGGGAGA | + |
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Preference number: 4 (lower is better) Translates to: CMPAIPGLRKLRQGDSELWAAQR*AAGCGR Trigger: TCTCCCACAGCCAGCAGCCCAGCGCTGTGCAGCCCA...TAACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | GAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGTGTAGGGGATAGGTaGCCCAGTGAGTCGGAGCAG | + |
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Preference number: 4 (lower is better) Translates to: ELCRTAEHGACLLFQDSGSVGDR*PSESEQ Trigger: CTGCTCCGACTCACTGGGCCACCTATCCCCTACACT...TCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | CAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTGAGTGCTATACCAGGGCTGTaGCCGGTCTTGGGGCTGACC | + |
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Preference number: 4 (lower is better) Translates to: QLGKCTSLKGWNPRMQVSAIPGL*PVLGLT Trigger: GGTCAGCCCCAAGACCGGCCACAGCCCTGGTATAGC...ACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | TTACCTGGGTTTGTGGGGAAGGTAGCTGAGGTGGGTGGGATGGTGCAGAGCTATGATTGCTTCGGGAGCTaGTTCAGCGCCAGGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: LPGFVGKVAEVGGMVQSYDCFGS*FSARGV Trigger: AACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATC...ATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGTTTGGACCAGGGTCTaGGCACTCAGAGCCATCATG | + |
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Preference number: 4 (lower is better) Translates to: SRAWCMPAIPGLRKLRQGVWTRV*ALRAIM Trigger: CATGATGGCTCTGAGTGCCCAGACCCTGGTCCAAAC...CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | TTACCTGGGTTTGTGGGGAAGGTAGCTGAGGTGGGTGGGATGGTGCAGAGCTATAGCCACGGAGGGAAGTaGATTGCTTCGGGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: LPGFVGKVAEVGGMVQSYSHGGK*IASGAA Trigger: AGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCT...ATAGCTCTGCACCATCCCACCCACCTCAGCTACCTTCCCCACAAACCCAGGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | TGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTTACCCTTTGCAGCCTCCTaGCCTCCTCTCCACCCATCT | + |
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Preference number: 4 (lower is better) Translates to: CMPAIPGLRKLRQGDSELPFAAS*PPLHPS Trigger: AGATGGGTGGAGAGGAGGGCAGGAGGCTGCAAAGGG...TAACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGGTTGTGAAGTTCAGAGCAGGTGGCCATTTTACCTGGGTTTGTGGGGAAAGGTTGCTCCCCCTTTaGAGCCTCCTGCCCTCCTCT | + |
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Preference number: 4 (lower is better) Translates to: PRVVKFRAGGHFTWVCGERLLPL*SLLPSS Trigger: AGAGGAGGGCAGGAGGCTGCAAAGGGGGAGCAACCT...TTCCCCACAAACCCAGGTAAAATGGCCACCTGCTCTGAACTTCACAACCCTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | GCAATGTGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCAGCCACGGAGGGAAGTaGATTGCTTCGGGAGCTGCT | + |
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Preference number: 4 (lower is better) Translates to: AMCGQCVWRREDNIWCYSSHGGK*IASGAA Trigger: AGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCT...GGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACACATTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CCA 90 bp | AGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGTGATTAGGTCCCCATaGAGGACAGGTTCTGTCAGG | + |
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Preference number: 4 (lower is better) Translates to: SRAWCMPAIPGLRKLRQGVIRSP*RTGSVR Trigger: CCTGACAGAACCTGTCCTCCATGGGGACCTAATCAC...CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | GCAATGTGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCGTTTGGACCAGGGTCTaGGCACTCAGAGCCATCATG | + |
|
Preference number: 4 (lower is better) Translates to: AMCGQCVWRREDNIWCYSVWTRV*ALRAIM Trigger: CATGATGGCTCTGAGTGCCCAGACCCTGGTCCAAAC...GGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACACATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | GAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAGCTGTAGGAATTGGCTaGCTCAATGCCAATGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: ELCRTAEHGACLLFQDSGAVGIG*LNANAI Trigger: TATGGCATTGGCATTGAGTCAGCCAATTCCTACAGC...TCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | GATAGCTCTGTCTCTGTCTCCCTACCACCGGGATGGCATACCCAGCTTTATATTGATTGCTTCGGGAGCTaGTTCAGCGCCAGGGGTGTT | + |
|
Preference number: 4 (lower is better) Translates to: DSSVSVSLPPGWHTQLYIDCFGS*FSARGV Trigger: AACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATC...AATATAAAGCTGGGTATGCCATCCCGGTGGTAGGGAGACAGAGACAGAGCTATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR GCA 90 bp | ATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTTATATAGACCAGAGGCCTCCCCTTCCCTCTaGTTCCAGGGTTGGCCTAGA | + |
|
Preference number: 4 (lower is better) Translates to: IPGLRKLRQGDSELYRPEASPSL*FQGWPR Trigger: TCTAGGCCAACCCTGGAAGCAGAGGGAAGGGGAGGC...CTCTGGTCTATATAACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | TTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATCTTCCACCTCAGTTTaGACCAGGGTCTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: FAESSWASVPHSKGGIPESSTSV*TRVWAL Trigger: GAGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGA...TTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | CAGAAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGCGGCCGAACCGGCCCTaGCCCAGGGGACGCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKISGQLVKDTKVHRSTERPNRP*PRGRTS Trigger: GGAAGTGCGTCCCCTGGGCCAGGGCCGGTTCGGCCG...CTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | AGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGGAAGCTGTAGGAATTaGCTGACTCAATGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: SRAWCMPAIPGLRKLRQGGSCRN*LTQCQC Trigger: GCATTGGCATTGAGTCAGCCAATTCCTACAGCTTCC...CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | GCAATGTGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCGTGATTAGGTCCCCATaGAGGACAGGTTCTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: AMCGQCVWRREDNIWCYSVIRSP*RTGSVR Trigger: CCTGACAGAACCTGTCCTCCATGGGGACCTAATCAC...GGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACACATTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CCA 90 bp | CAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCCCAGGCACTATCGGAAGCTGTAGGAATTaGCTGACTCAATGCCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: QCVWRREDNIWCYSPGTIGSCRN*LTQCQC Trigger: GCATTGGCATTGAGTCAGCCAATTCCTACAGCTTCC...GATAGTGCCTGGGGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | TGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCCCAGGCACTATCTAAACCTTCCATCCTCCACAGTTaGCACTTCCATTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CGGERTTSGAIPQALSKPSILHS*HFHWLV Trigger: GACAAGCCAATGGAAGTGTCAACTGTGGAGGATGGA...AGGTTTAGATAGTGCCTGGGGAATAGCACCAGATGTTGTCCTCTCGCCTCCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | GCAATGTGTGGACAGTGTGTGTGGAGGCGAGAGGACAACATCTGGTGCTATTCCGCTGTAGGAATTGGCTaGCTCAATGCCAATGCCATA | + |
|
Preference number: 4 (lower is better) Translates to: AMCGQCVWRREDNIWCYSAVGIG*LNANAI Trigger: TATGGCATTGGCATTGAGTCAGCCAATTCCTACAGC...GGAATAGCACCAGATGTTGTCCTCTCGCCTCCACACACACTGTCCACACATTGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR GCA 90 bp | TGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTTACTGACTCAATGCCAATaGCATAGGCTGTCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: CMPAIPGLRKLRQGDSELLTQCQ*HRLSRW Trigger: CCATCGTGACAGCCTATGGCATTGGCATTGAGTCAG...TAACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGACCCACCTTGGGCTaGATGAAGGTGATTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FICREQLGKCTSLKGWNPRPTLG*MKVIRS Trigger: GGACCTAATCACCTTCATCCAGCCCAAGGTGGGTCT...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR TCA 90 bp | ATTCCAGGACTCAGGAAGCTAAGGCAGGGGGATTCAGAGTTATATAGACCAGAGTCCATCCTCCACAGTTaGCACTTCCATTGGCTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: IPGLRKLRQGDSELYRPESILHS*HFHWLV Trigger: GACAAGCCAATGGAAGTGTCAACTGTGGAGGATGGA...CTCTGGTCTATATAACTCTGAATCCCCCTGCCTTAGCTTCCTGAGTCCTGGAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCACTATCTAAACCTTGTTTTTATGAGACAATGGCCTTGAAGCTCAACTCTTCCACCTCAGTTTaGACCAGGGTCTGGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PQALSKPCFYETMALKLNSSTSV*TRVWAL Trigger: GAGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGA...GTTGAGCTTCAAGGCCATTGTCTCATAAAAACAAGGTTTAGATAGTGCCTGGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | AAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGAAGCGAAGTCTGTCAGCTTaGCGCGCTGGCAGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KISGQLVKDTKVHRSTEKRSLSA*RAGRLG Trigger: ACCCAGCCTGCCAGCGCGTCAAGCTGACAGACTTCG...CTTCTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CCA 90 bp | TTTTATGAGACAATGGCCTTGAAGCTCAACATTGAGGCCAGGCTAGTGATGCATGTCGTCACCTTGGGCTaGATGAAGGTGATTAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FYETMALKLNIEARLVMHVVTLG*MKVIRS Trigger: GGACCTAATCACCTTCATCCAGCCCAAGGTGACGAC...ATGCATCACTAGCCTGGCCTCAATGTTGAGCTTCAAGGCCATTGTCTCATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | AAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGAAGTTCCTCTTCCGGGGGTaGGGATCTAGCAGCCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KISGQLVKDTKVHRSTEKFLFRG*GSSSPH Trigger: ATGGGGGCTGCTAGATCCTCACCCCCGGAAGAGGAA...CTTCTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR TCA 90 bp | CAGAAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGGGCCTAGATAGCTCTTaGTGGAGCCCACAGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QKISGQLVKDTKVHRSTEGLDSS*WSPQGS Trigger: GGAACCCTGTGGGCTCCATCAAGAGCTATCTAGGCC...CTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR TCA 90 bp | AAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGAAGACCAGGCCATGCGAGTaGATGTGTTCCAGGGCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: KISGQLVKDTKVHRSTEKTRPCE*MCSRAE Trigger: CTCTGCCCTGGAACACATTCACTCGCATGGCCTGGT...CTTCTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR GCA 90 bp | AAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGAAGCGATGGCAGAATGTGTaGCAAGTGAGAGGCCCACGC | + |
|
Preference number: 4 (lower is better) Translates to: KISGQLVKDTKVHRSTEKRWQNV*QVRGPR Trigger: GCGTGGGCCTCTCACTTGGCACACATTCTGCCATCG...CTTCTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| 3UTR CAA 72 bp | GCACTATCTAAACCTTGTTTTTATGAGACAATGGCCTaGAAGCTCAACATTGAGGCCAGGCTAGTGATGCAT | + |
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Preference number: 4 (lower is better) Translates to: ALSKPCFYETMA*KLNIEARLVMH Trigger: ATGCATCACTAGCCTGGCCTCAATGTTGAGCTTCAAGGCCATTGTCTCATAAAAACAAGGTTTAGATAGTGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR TCA 90 bp | GTATCAAGGGTTAGAAGAAGGTGTAGTAGTAGGATGAGACTGTTTCAAACAATTTCTGACTCACTTAGCTaGCTCCAATCCAGACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSRVRRRCSSRMRLFQTISDSLS*LQSRQH Trigger: GTGCTGTCTGGATTGGAGTCAGCTAAGTGAGTCAGA...AATTGTTTGAAACAGTCTCATCCTACTACTACACCTTCTTCTAACCCTTGATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR GCA 90 bp | CTTGTGTTTGCAAAACAAGTAATTTACAAACTGAGCTATCTCCCAGCTCTTGTTCTGACTCAATGCCAATaGCATAGGCTGTCACGATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVFAKQVIYKLSYLPALVLTQCQ*HRLSRW Trigger: CCATCGTGACAGCCTATGGCATTGGCATTGAGTCAG...AACAAGAGCTGGGAGATAGCTCAGTTTGTAAATTACTTGTTTTGCAAACACAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS TCA 90 bp | GGAGCAGGGTCCCTCGGGGCCGGGTGTGGCCGAAGTCTGTCAGCTTaGCGCGCTGGCAGGCTGGGTCACACACCAGCACATTCTCTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAGSLGAGCGRSLSA*RAGRLGHTPAHSLA Trigger: AGCCAGAGAATGTGCTGGTGTGTGACCCAGCCTGCCAGCGCGTCAAGCTGACAGACTTCGGCCACACCCGGCCCCGAGGGACCCTGCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS CCA 90 bp | GTCCCTCGGGGCCGGGTGTGGCCGAAGTCTGTCAGCTTGACGCGCTaGCAGGCTGGGTCACACACCAGCACATTCTCTGGCTTCAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VPRGRVWPKSVSLTR*QAGSHTSTFSGFKS Trigger: GGACTTGAAGCCAGAGAATGTGCTGGTGTGTGACCCAGCCTGCCAGCGCGTCAAGCTGACAGACTTCGGCCACACCCGGCCCCGAGGGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS CCA 90 bp | GCTGCACAGCGCTGGGCTGCTGGCTGTGGGAGACCCACCTTGGGCTaGATGAAGGTGATTAGGTCCCCATGGAGGACAGGTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AAQRWAAGCGRPTLG*MKVIRSPWRTGSVR Trigger: CCTGACAGAACCTGTCCTCCATGGGGACCTAATCACCTTCATCCAGCCCAAGGTGGGTCTCCCACAGCCAGCAGCCCAGCGCTGTGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS-3UTR CAA 90 bp | GAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAGGGCTGTGGCCGGTCTaGGGGCTGACCAGAAGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: ELCRTAEHGACLLFQDSGGLWPV*GLTRSL Trigger: CAGGCTTCTGGTCAGCCCCAAGACCGGCCACAGCCC...TCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS GCA 90 bp | AGGCCCACGCAGAACTCATACAGGAAGCCACGGAGGGAAGTGGATTaGTTCGGGAGCTGCTTCAGCGCCAGGGGTGTTCCTTTCTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPTQNSYRKPRREVD*FGSCFSARGVPFWR Trigger: CCGCCAGAAAGGAACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGCGTGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CCA 90 bp | TGGCCCAGGGGACGCACTTCCTCGTACAGCTCTTCCACCTCAGTTTaGACCAGGGTCTGGGCACTCAGAGCCATCATGTCCTCCAAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WPRGRTSSYSSSTSV*TRVWALRAIMSSKA Trigger: GGCCTTGGAGGACATGATGGCTCTGAGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGAGCTGTACGAGGAAGTGCGTCCCCTGGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS TCA 90 bp | ACCAGGGCTGTGGCCGGTCTTGGGGCTGACCAGAAGCCTGCCAGATaGGAAAGTCCTCAAAGAAAGGGTCAACCTCCACCAGGGGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TRAVAGLGADQKPAR*ESPQRKGQPPPGAG Trigger: ACCAGCCCCTGGTGGAGGTTGACCCTTTCTTTGAGGACTTTCTCATCTGGCAGGCTTCTGGTCAGCCCCAAGACCGGCCACAGCCCTGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS TCA 90 bp | CAGCCTCCCCTTCCCTCTGCTTCCAGGGTTGGCCTAGATAGCTCTTaGTGGAGCCCACAGGGTTCCTCTTCCGGGGGTGAGGATCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: QPPLPSASRVGLDSS*WSPQGSSSGGEDLA Trigger: TGCTAGATCCTCACCCCCGGAAGAGGAACCCTGTGGGCTCCATCAAGAGCTATCTAGGCCAACCCTGGAAGCAGAGGGAAGGGGAGGCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS CCA 90 bp | CGCACTTCCTCGTACAGCTCTTCCACCTCAGTTTGGACCAGGGTCTaGGCACTCAGAGCCATCATGTCCTCCAAGGCCAGAGCAGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RTSSYSSSTSVWTRV*ALRAIMSSKARAAS Trigger: GGAGGCTGCTCTGGCCTTGGAGGACATGATGGCTCTGAGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGAGCTGTACGAGGAAGTGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CCA 90 bp | GTGAGAGGCCCACGCAGAACTCATACAGGAAGCCACGGAGGGAAGTaGATTGCTTCGGGAGCTGCTTCAGCGCCAGGGGTGTTCCTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: VRGPRRTHTGSHGGK*IASGAASAPGVFLS Trigger: AGAAAGGAACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGCGTGGGCCTCTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS TCA 90 bp | GCTGCAGGTGACAGGCTATACCAGGGCTGTGGCCGGTCTTGGGGCTaGCCAGAAGCCTGCCAGATGAGAAAGTCCTCAAAGAAAGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: AAGDRLYQGCGRSWG*PEACQMRKSSKKGS Trigger: TGACCCTTTCTTTGAGGACTTTCTCATCTGGCAGGCTTCTGGTCAGCCCCAAGACCGGCCACAGCCCTGGTATAGCCTGTCACCTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS CCA 90 bp | GCGTTCCAATCCAACGTACAGAAGGCCCGCGTCGTCACCTTGGGCTaGATGAAGGTGATTAGGTCCCCATGGAGGACAGGTTCTGTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AFQSNVQKARVVTLG*MKVIRSPWRTGSVR Trigger: CCTGACAGAACCTGTCCTCCATGGGGACCTAATCACCTTCATCCAGCCCAAGGTGACGACGCGGGCCTTCTGTACGTTGGATTGGAACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCCAGGTTGCTCCCCCTTaGCAGCCTCCTGCCCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FICREQLGKCTSLKGWNPQVAPP*QPPALL Trigger: GAGGAGGGCAGGAGGCTGCAAAGGGGGAGCAACCTG...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CAA 90 bp | CAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCAGAATGCAGGTGAGTACGGAGGGAAGTGGATaGCTTCGGGAGCTGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: QLGKCTSLKGWNPRMQVSTEGSG*LRELLQ Trigger: CTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGT...ACTCACCTGCATTCTGGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS TCA 90 bp | AATGCCAATGCCATAGGCTGTCACGATGGCAGAATGTGTGCCAAGTaGGAGGCCCACGCAGAACTCATACAGGAAGCCACGGAGGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NANAIGCHDGRMCAK*EAHAELIQEATEGS Trigger: ACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGCGTGGGCCTCTCACTTGGCACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS GCA 90 bp | CTGACTCAATGCCAATGCCATAGGCTGTCACGATGGCAGAATGTGTaGCAAGTGAGAGGCCCACGCAGAACTCATACAGGAAGCCACGGA | + |
|
Preference number: 5 (lower is better) Translates to: LTQCQCHRLSRWQNV*QVRGPRRTHTGSHG Trigger: TCCGTGGCTTCCTGTATGAGTTCTGCGTGGGCCTCTCACTTGGCACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGAAGCTAAGGCAGGGGCTCCATCCTCCACAGTaGACACTTCCATTGGCTTGT | + |
|
Preference number: 5 (lower is better) Translates to: SRAWCMPAIPGLRKLRQGLHPPQ*TLPLAC Trigger: ACAAGCCAATGGAAGTGTCAACTGTGGAGGATGGAG...CCCCTGCCTTAGCTTCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CAA 90 bp | TTTATTTGCAGAGAGCAGCTGGGCAAGTGTACCTCACTCAAAGGGTGGAATCCCCTCTTCCACCTCAGTTaGGACCAGGGTCTGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: FICREQLGKCTSLKGWNPLFHLS*DQGLGT Trigger: AGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGAG...GGGATTCCACCCTTTGAGTGAGGTACACTTGCCCAGCTGCTCTCTGCAAATAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS TCA 90 bp | GTCCCCATGGAGGACAGGTTCTGTCAGGAAGCTGTAGGAATTGGCTaGCTCAATGCCAATGCCATAGGCTGTCACGATGGCAGAATGTGT | + |
|
Preference number: 5 (lower is better) Translates to: VPMEDRFCQEAVGIG*LNANAIGCHDGRMC Trigger: ACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAGCCAATTCCTACAGCTTCCTGACAGAACCTGTCCTCCATGGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS GCA 90 bp | GGAGGACAGGTTCTGTCAGGAAGCTGTAGGAATTGGCTGACTCAATaGCAATGCCATAGGCTGTCACGATGGCAGAATGTGTGCCAAGTG | + |
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Preference number: 5 (lower is better) Translates to: GGQVLSGSCRNWLTQ*QCHRLSRWQNVCQV Trigger: CACTTGGCACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAGCCAATTCCTACAGCTTCCTGACAGAACCTGTCCTCC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | GAGCTATGCCGGACAGCAGAGCATGGTGCATGCCTGCTATTCCAGGACTCAGGACAGTTGACACTTCCATaGGCTTGTCTTCTGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: ELCRTAEHGACLLFQDSGQLTLP*ACLLTV Trigger: AACAGTCAGAAGACAAGCCAATGGAAGTGTCAACTG...TCCTGAGTCCTGGAATAGCAGGCATGCACCATGCTCTGCTGTCCGGCATAGCTC 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CAA 90 bp | CAGAAAATAAGCGGGCAGTTAGTAAAGGACACAAAAGTACATAGAAGTACAGAGCAGGGCAGAGGCCAGTaGGGCTGCACAGCGCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: QKISGQLVKDTKVHRSTEQGRGQ*GCTALG Trigger: GCCCAGCGCTGTGCAGCCCAACTGGCCTCTGCCCTG...CTCTGTACTTCTATGTACTTTTGTGTCCTTTACTAACTGCCCGCTTATTTTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS CCA 90 bp | TGTAGGAATTGGCTGACTCAATGCCAATGCCATAGGCTGTCACGATaGCAGAATGTGTGCCAAGTGAGAGGCCCACGCAGAACTCATACA | + |
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Preference number: 5 (lower is better) Translates to: CRNWLTQCQCHRLSR*QNVCQVRGPRRTHT Trigger: TGTATGAGTTCTGCGTGGGCCTCTCACTTGGCACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAGCCAATTCCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CCA 90 bp | TTAGGTCCCCATGGAGGACAGGTTCTGTCAGGAAGCTGTAGGAATTaGCTGACTCAATGCCAATGCCATAGGCTGTCACGATGGCAGAAT | + |
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Preference number: 5 (lower is better) Translates to: LGPHGGQVLSGSCRN*LTQCQCHRLSRWQN Trigger: ATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAGCCAATTCCTACAGCTTCCTGACAGAACCTGTCCTCCATGGGGACCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | CCTAGGGTTGTGAAGTTCAGAGCAGGTGGCCATTTTACCTGGGTTTGTGGGGAAGACACTTCCATTGGCTaGTCTTCTGACTGTTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PRVVKFRAGGHFTWVCGEDTSIG*SSDCLP Trigger: AGGCAAACAGTCAGAAGACAAGCCAATGGAAGTGTC...TTCCCCACAAACCCAGGTAAAATGGCCACCTGCTCTGAACTTCACAACCCTAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000182214.8 |
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| CDS-3UTR CAA 90 bp | CTACCACCGGGATGGCATACCCAGCTTTATATTTTCTTTAAATGTGTGCTCTGGACGGAGGGAAGTGGATaGCTTCGGGAGCTGCTTCAG | + |
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Preference number: 5 (lower is better) Translates to: LPPGWHTQLYIFFKCVLWTEGSG*LRELLQ Trigger: CTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGT...CCAGAGCACACATTTAAAGAAAATATAAAGCTGGGTATGCCATCCCGGTGGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | GTGTGCTCTGGGGCTCACACTCCGTTCCTTGTGTTTGCAAAACAAGTAATTTACGACACTTCCATTGGCTaGTCTTCTGACTGTTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: VCSGAHTPFLVFAKQVIYDTSIG*SSDCLP Trigger: AGGCAAACAGTCAGAAGACAAGCCAATGGAAGTGTC...GTAAATTACTTGTTTTGCAAACACAAGGAACGGAGTGTGAGCCCCAGAGCACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | CTTGTGTTTGCAAAACAAGTAATTTACAAACTGAGCTATCTCCCAGCTCTTGTTCTCTTCCACCTCAGTTaGGACCAGGGTCTGGGCACT | + |
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Preference number: 5 (lower is better) Translates to: LVFAKQVIYKLSYLPALVLFHLS*DQGLGT Trigger: AGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGAG...AACAAGAGCTGGGAGATAGCTCAGTTTGTAAATTACTTGTTTTGCAAACACAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS-3UTR CAA 90 bp | CCGTTCCTTGTGTTTGCAAAACAAGTAATTTACAAACTGAGCTATCTCCCAGCTCAGTTGACACTTCCATaGGCTTGTCTTCTGACTGTT | + |
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Preference number: 5 (lower is better) Translates to: PFLVFAKQVIYKLSYLPAQLTLP*ACLLTV Trigger: AACAGTCAGAAGACAAGCCAATGGAAGTGTCAACTG...AGCTGGGAGATAGCTCAGTTTGTAAATTACTTGTTTTGCAAACACAAGGAACGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS CCA 72 bp | CCAGTGAGTCGGAGCAGGGTCCCTCGGGGCCGGGTGTaGCCGAAGTCTGTCAGCTTGACGCGCTGGCAGGCT | + |
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Preference number: 6 (lower is better) Translates to: PVSRSRVPRGRV*PKSVSLTRWQA Trigger: AGCCTGCCAGCGCGTCAAGCTGACAGACTTCGGCCACACCCGGCCCCGAGGGACCCTGCTCCGACTCACTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS CAA 90 bp | CGGAGCAGGGTCCCTCGGGGCCGGGTGTGGCCGAAGTCTGTCAGCTaGACGCGCTGGCAGGCTGGGTCACACACCAGCACATTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: RSRVPRGRVWPKSVS*TRWQAGSHTSTFSG Trigger: GCCAGAGAATGTGCTGGTGTGTGACCCAGCCTGCCAGCGCGTCAAGCTGACAGACTTCGGCCACACCCGGCCCCGAGGGACCCTGCTCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS TCA 72 bp | AGCTGCTTCAGCGCCAGGGGTGTTCCTTTCTGGCGGTaGGTAACCAGCAGGACACGGCCGAACCGGCCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SCFSARGVPFWR*VTSRTRPNRPW Trigger: CCAGGGCCGGTTCGGCCGTGTCCTGCTGGTTACTCACCGCCAGAAAGGAACACCCCTGGCGCTGAAGCAGCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CCA 72 bp | GGCCGGGTGTGGCCGAAGTCTGTCAGCTTGACGCGCTaGCAGGCTGGGTCACACACCAGCACATTCTCTGGC | + |
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Preference number: 6 (lower is better) Translates to: GRVWPKSVSLTR*QAGSHTSTFSG Trigger: GCCAGAGAATGTGCTGGTGTGTGACCCAGCCTGCCAGCGCGTCAAGCTGACAGACTTCGGCCACACCCGGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS CAA 90 bp | CTGGCCCAGGGGACGCACTTCCTCGTACAGCTCTTCCACCTCAGTTaGGACCAGGGTCTGGGCACTCAGAGCCATCATGTCCTCCAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LAQGTHFLVQLFHLS*DQGLGTQSHHVLQG Trigger: GCCTTGGAGGACATGATGGCTCTGAGTGCCCAGACCCTGGTCCAAACTGAGGTGGAAGAGCTGTACGAGGAAGTGCGTCCCCTGGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CAA 90 bp | GAGGCCCACGCAGAACTCATACAGGAAGCCACGGAGGGAAGTGGATaGCTTCGGGAGCTGCTTCAGCGCCAGGGGTGTTCCTTTCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: EAHAELIQEATEGSG*LRELLQRQGCSFLA Trigger: CGCCAGAAAGGAACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGCGTGGGCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CAA 90 bp | AGTTGGGCTGCACAGCGCTGGGCTGCTGGCTGTGGGAGACCCACCTaGGGCTGGATGAAGGTGATTAGGTCCCCATGGAGGACAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: SWAAQRWAAGCGRPT*GWMKVIRSPWRTGS Trigger: AGAACCTGTCCTCCATGGGGACCTAATCACCTTCATCCAGCCCAAGGTGGGTCTCCCACAGCCAGCAGCCCAGCGCTGTGCAGCCCAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS CCA 72 bp | CCACGCAGAACTCATACAGGAAGCCACGGAGGGAAGTaGATTGCTTCGGGAGCTGCTTCAGCGCCAGGGGTG | + |
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Preference number: 6 (lower is better) Translates to: PRRTHTGSHGGK*IASGAASAPGV Trigger: CACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS TCA 72 bp | TCTGGCTTCAAGTCCCGGTACACCAGGCCATGCGAGTaGATGTGTTCCAGGGCAGAGGCCAGTTGGGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: SGFKSRYTRPCE*MCSRAEASWAA Trigger: TGCAGCCCAACTGGCCTCTGCCCTGGAACACATTCACTCGCATGGCCTGGTGTACCGGGACTTGAAGCCAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 |
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| CDS TCA 72 bp | CTCTTGATGGAGCCCACAGGGTTCCTCTTCCGGGGGTaGGGATCTAGCAGCCCCCATAGGAGAGTGTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: LLMEPTGFLFRG*GSSSPHRRVSA Trigger: AGCAGACACTCTCCTATGGGGGCTGCTAGATCCTCACCCCCGGAAGAGGAACCCTGTGGGCTCCATCAAGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS TCA 72 bp | CTTCCCTCTGCTTCCAGGGTTGGCCTAGATAGCTCTTaGTGGAGCCCACAGGGTTCCTCTTCCGGGGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: LPSASRVGLDSS*WSPQGSSSGGE Trigger: CTCACCCCCGGAAGAGGAACCCTGTGGGCTCCATCAAGAGCTATCTAGGCCAACCCTGGAAGCAGAGGGAAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS CAA 72 bp | GCAGAACTCATACAGGAAGCCACGGAGGGAAGTGGATaGCTTCGGGAGCTGCTTCAGCGCCAGGGGTGTTCC | + |
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Preference number: 6 (lower is better) Translates to: AELIQEATEGSG*LRELLQRQGCS Trigger: GGAACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS TCA 72 bp | GACAGGCTATACCAGGGCTGTGGCCGGTCTTGGGGCTaGCCAGAAGCCTGCCAGATGAGAAAGTCCTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: DRLYQGCGRSWG*PEACQMRKSSK Trigger: CTTTGAGGACTTTCTCATCTGGCAGGCTTCTGGTCAGCCCCAAGACCGGCCACAGCCCTGGTATAGCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 |
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| CDS GCA 72 bp | CAGAACTCATACAGGAAGCCACGGAGGGAAGTGGATTaGTTCGGGAGCTGCTTCAGCGCCAGGGGTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: QNSYRKPRREVD*FGSCFSARGVP Trigger: AGGAACACCCCTGGCGCTGAAGCAGCTCCCGAAGCAATCCACTTCCCTCCGTGGCTTCCTGTATGAGTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS CAA 90 bp | GACTGTGCGTTCCAATCCAACGTACAGAAGGCCCGCGTCGTCACCTaGGGCTGGATGAAGGTGATTAGGTCCCCATGGAGGACAGGTTCT | + |
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Preference number: 6 (lower is better) Translates to: DCAFQSNVQKARVVT*GWMKVIRSPWRTGS Trigger: AGAACCTGTCCTCCATGGGGACCTAATCACCTTCATCCAGCCCAAGGTGACGACGCGGGCCTTCTGTACGTTGGATTGGAACGCACAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS CAA 72 bp | TTCCAATCCAACGTACAGAAGGCCCGCGTCGTCACCTaGGGCTGGATGAAGGTGATTAGGTCCCCATGGAGG | + |
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Preference number: 6 (lower is better) Translates to: FQSNVQKARVVT*GWMKVIRSPWR Trigger: CCTCCATGGGGACCTAATCACCTTCATCCAGCCCAAGGTGACGACGCGGGCCTTCTGTACGTTGGATTGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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| CDS CCA 72 bp | TGGCTGACTCAATGCCAATGCCATAGGCTGTCACGATaGCAGAATGTGTGCCAAGTGAGAGGCCCACGCAGA | + |
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Preference number: 6 (lower is better) Translates to: WLTQCQCHRLSR*QNVCQVRGPRR Trigger: TCTGCGTGGGCCTCTCACTTGGCACACATTCTGCCATCGTGACAGCCTATGGCATTGGCATTGAGTCAGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000032598.14 ENSMUST00000182214.8 ENSMUST00000183170.2 ENSMUST00000208109.2 |
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| CDS TCA 72 bp | CTGACTCCAATCCAGACAGCACAGGGACAAGTTGTGTaGCTGTGCGTTCCAATCCAACGTACAGAAGGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LTPIQTAQGQVV*LCVPIQRTEGP Trigger: CGGGCCTTCTGTACGTTGGATTGGAACGCACAGTCACACAACTTGTCCCTGTGCTGTCTGGATTGGAGTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208109.2 |
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