Pregenerated sensors for SBK1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042978Ensembl transcript IDs: ENSMUST00000056028.11, ENSMUST00000206541.2, ENSMUST00000239081.2
Found 171 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCAGCTGGGCTGTGCATGGACTCCATTGCCCTGGGGACACAGGAGTaGCGAGCCTCCTGTTCCCCAGCCATCTGCTCCCTTACTCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: AAGLCMDSIALGTQE*RASCSPAICSLTPR Trigger: CCTGGGAGTAAGGGAGCAGATGGCTGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | TTCCCTGCTTGTGGAGTGCTCTGGAGGGAGCAGCTGGGCTGTGCATaGACTCCATTGCCCTGGGGACACAGGAGTGCCGAGCCTCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: FPACGVLWREQLGCA*TPLPWGHRSAEPPV Trigger: AACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | CAGGTGGGCCAGGGCAGTGATGGGGGCCTTCTGAGACTCGGCTCTTaGCAGGAGGAGGGGTTTGCTACTTACCTGGCATATGTGGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: QVGQGSDGGLLRLGS*QEEGFATYLAYVAL Trigger: CAGGGCCACATATGCCAGGTAAGTAGCAAACCCCTCCTCCTGCCAAGAGCCGAGTCTCAGAAGGCCCCCATCACTGCCCTGGCCCACCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR TCA 90 bp | AACCCAACCGACAGAGACAGTACCAGCGGTGGCAAGAGCAGAGGCTaGCCCAGTCCGAGTCCTGTTCCAGGTCAGGCTGGTTGCTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: NPTDRDSTSGGKSRG*PSPSPVPGQAGCCL Trigger: GAGGCAGCAACCAGCCTGACCTGGAACAGGACTCGGACTGGGTCAGCCTCTGCTCTTGCCACCGCTGGTACTGTCTCTGTCGGTTGGGTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | GTCACAACTGTTTCCCTGCTTGTGGAGTGCTCTGGAGGGAGCAGCTaGGCTGTGCATGGACTCCATTGCCCTGGGGACACAGGAGTGCCG | + |
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Preference number: 1 (lower is better) Translates to: VTTVSLLVECSGGSS*AVHGLHCPGDTGVP Trigger: CGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAAACAGTTGTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | CCCAGGAGTAGCTGTCACAACTGTTTCCCTGCTTGTGGAGTGCTCTaGAGGGAGCAGCTGGGCTGTGCATGGACTCCATTGCCCTGGGGA | + |
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Preference number: 1 (lower is better) Translates to: PRSSCHNCFPACGVL*REQLGCAWTPLPWG Trigger: TCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAAACAGTTGTGACAGCTACTCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | GCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGGTaGCACCCCAGGAGAGTAGGACCAGGCCCTGGAGCAACCACAGTT | + |
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Preference number: 1 (lower is better) Translates to: ATYLAYVALCPLGKW*HPRRVGPGPGATTV Trigger: AACTGTGGTTGCTCCAGGGCCTGGTCCTACTCTCCTGGGGTGCCACCACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | TTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTaGTGGCACCCCAGGAGAGTAGGACCAGGCCCTGGAGCAACCACA | + |
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Preference number: 1 (lower is better) Translates to: FATYLAYVALCPLGK*WHPRRVGPGPGATT Trigger: TGTGGTTGCTCCAGGGCCTGGTCCTACTCTCCTGGGGTGCCACCACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 90 bp | AGAAACCCAGGAGTAGCTGTCACAACTGTTTCCCTGCTTGTGGAGTaGTCTGGAGGGAGCAGCTGGGCTGTGCATGGACTCCATTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RNPGVAVTTVSLLVE*SGGSSWAVHGLHCP Trigger: AGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAAACAGTTGTGACAGCTACTCCTGGGTTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR TCA 90 bp | GTGTCTGGACACTTAGACACACATCACACTCCCTCCTCACTTCAGTaGCCTGCTCTGCCCCTGAAAGGGTACTGGCCTAGAACCCAGGCT | + |
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Preference number: 1 (lower is better) Translates to: VSGHLDTHHTPSSLQ*PALPLKGYWPRTQA Trigger: AGCCTGGGTTCTAGGCCAGTACCCTTTCAGGGGCAGAGCAGGTCACTGAAGTGAGGAGGGAGTGTGATGTGTGTCTAAGTGTCCAGACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | AGGGAGAAGCCTCCCACACAGGATCTCAACAGAGAGGGGCGCTTGTaGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTTGTTATTG | + |
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Preference number: 1 (lower is better) Translates to: REKPPTQDLNREGRL*DAGCLPWNLASLLL Trigger: CAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTGTTGAGATCCTGTGTGGGAGGCTTCTCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | GTCCGAGTCCTGTTCCAGGTCAGGCTGGTTGCTGCCTCTAAACAATaGGGCTGGGCTACGTACCTAAGGTCTCTTCTGAGGACTACCATC | + |
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Preference number: 1 (lower is better) Translates to: VRVLFQVRLVAASKQ*GWATYLRSLLRTTI Trigger: GATGGTAGTCCTCAGAAGAGACCTTAGGTACGTAGCCCAGCCCCATTGTTTAGAGGCAGCAACCAGCCTGACCTGGAACAGGACTCGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 90 bp | GAAGCCTCCCACACAGGATCTCAACAGAGAGGGGCGCTTGTGGGATaGGGGATGTCTACCGTGGAATCTCGCTTCCTTGTTATTGCAGAT | + |
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Preference number: 1 (lower is better) Translates to: EASHTGSQQRGALVG*GMSTVESRFLVIAD Trigger: ATCTGCAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTGTTGAGATCCTGTGTGGGAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 90 bp | GCCTGTCCTTTGCCAGTTTCTAAGGATCGATCTCATGCCCATATCTaGCCGACACCAAAGCCCCCTTTCTGTGCCCAGGTTTGGATGGAA | + |
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Preference number: 1 (lower is better) Translates to: ACPLPVSKDRSHAHI*PTPKPPFCAQVWME Trigger: TTCCATCCAAACCTGGGCACAGAAAGGGGGCTTTGGTGTCGGGCAGATATGGGCATGAGATCGATCCTTAGAAACTGGCAAAGGACAGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 90 bp | ATATCTGCCCGACACCAAAGCCCCCTTTCTGTGCCCAGGTTTGGATaGAATACTGTAGGGTTATCTGCCAAGGGGTATGAAGCGCCAGGA | + |
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Preference number: 1 (lower is better) Translates to: ISARHQSPLSVPRFG*NTVGLSAKGYEAPG Trigger: TCCTGGCGCTTCATACCCCTTGGCAGATAACCCTACAGTATTCCATCCAAACCTGGGCACAGAAAGGGGGCTTTGGTGTCGGGCAGATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR TCA 90 bp | CTGCACACAACTTTTGCTACATTTAAAGGGCTTGGCCTCTTCCTCTaGCCTCCTGGAGACCACTGTTATCAACCCAGTGCCTGTCCTTTG | + |
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Preference number: 1 (lower is better) Translates to: LHTTFATFKGLGLFL*PPGDHCYQPSACPL Trigger: CAAAGGACAGGCACTGGGTTGATAACAGTGGTCTCCAGGAGGTCAGAGGAAGAGGCCAAGCCCTTTAAATGTAGCAAAAGTTGTGTGCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR TCA 90 bp | ATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATCAGCAGGAAGAAGTaGGGGGTATCACTAGATAATCGGGTCTGTTCCTGCACACAACTT | + |
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Preference number: 1 (lower is better) Translates to: IALPPGFKVPISRKK*GVSLDNRVCSCTQL Trigger: AAGTTGTGTGCAGGAACAGACCCGATTATCTAGTGATACCCCTCACTTCTTCCTGCTGATGGGAACTTTGAACCCAGGAGGGAGAGCTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 90 bp | TGTGGAGTGCTCTGGAGGGAGCAGCTGGGCTGTGCATGGACTCCATaGCCCTGGGGACACAGGAGTGCCGAGCCTCCTGTTCCCCAGCCA | + |
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Preference number: 2 (lower is better) Translates to: CGVLWREQLGCAWTP*PWGHRSAEPPVPQP Trigger: TGGCTGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR GCA 90 bp | CAGCGGTGGCAAGAGCAGAGGCTGACCCAGTCCGAGTCCTGTTCCAGGTCAGGCCTGGGGACACAGGAGTaGCGAGCCTCCTGTTCCCCA | + |
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Preference number: 2 (lower is better) Translates to: QRWQEQRLTQSESCSRSGLGTQE*RASCSP Trigger: TGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAG...GCCTGACCTGGAACAGGACTCGGACTGGGTCAGCCTCTGCTCTTGCCACCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 90 bp | GAACTTTTTGGAGGGACCCTAGGAGAGGCAGCCCAGGCTGGCCAGTaGGGTGGCGCCAGGCAGAAGGCACAGCCTGCCTGTGTTGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: ELFGGTLGEAAQAGQ*GGARQKAQPACVEV Trigger: AACCTCAACACAGGCAGGCTGTGCCTTCTGCCTGGCGCCACCCAACTGGCCAGCCTGGGCTGCCTCTCCTAGGGTCCCTCCAAAAAGTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 90 bp | TGTGTAGGGTCCCAAAGGAGAGCCGGGGCAGGGTGGATCCCTGCTTaGCTGCCTAAGAACCGGAGCCAACAGCAGGTACCTCCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: CVGSQRRAGAGWIPA*LPKNRSQQQVPPGV Trigger: AACCCCAGGAGGTACCTGCTGTTGGCTCCGGTTCTTAGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCTCCTTTGGGACCCTACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | CTGCTCACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCAGCTCAAAGGGGCCCCTaGGAAGCACCAAAGGACAGG | + |
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Preference number: 2 (lower is better) Translates to: LLTEPGGRPLANPRPHFPAQRGP*EAPKDR Trigger: CCTGTCCTTTGGTGCTTCCCAGGGGCCCCTTTGAGC...TGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGTGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCATGGCCTGCCCTGGGGTaGGACAGAGATGCACACATA | + |
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Preference number: 2 (lower is better) Translates to: LLTEPGGRPLANPRPHFPWPALG*DRDAHI Trigger: TATGTGTGCATCTCTGTCTCACCCCAGGGCAGGCCA...TGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGTGAGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | CAGAGAGGGGCGCTTGTGGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTTTCTGGAGGGAGCAGCTaGGCTGTGCATGGACTCCAT | + |
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Preference number: 2 (lower is better) Translates to: QRGALVGCGMSTVESRFLSGGSS*AVHGLH Trigger: ATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGA...AAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | GCATATGTGGCCCTGTGTCCACTAGGGAAGTGGTGGCACCCCAGGAGAGTAGGAGCTAAAACAGAGGCCTaGCTCTTGGCAGCTGCCTGG | + |
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Preference number: 2 (lower is better) Translates to: AYVALCPLGKWWHPRRVGAKTEA*LLAAAW Trigger: CCAGGCAGCTGCCAAGAGCCAGGCCTCTGTTTTAGC...TCCTACTCTCCTGGGGTGCCACCACTTCCCTAGTGGACACAGGGCCACATATGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR TCA 90 bp | CTGCTCACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCAACAGCCTGCCTGTGTTaGGGTTATTGCAAGGGTCCC | + |
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Preference number: 2 (lower is better) Translates to: LLTEPGGRPLANPRPHFPTACLC*GYCKGP Trigger: GGGACCCTTGCAATAACCTCAACACAGGCAGGCTGT...TGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGGTTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGGGAGCAGCTGGGCTGTaGATGGACTCCATTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: GGVCYLPGICGPVSTREVGAAGL*MDSIAL Trigger: CAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCC...CACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAACCCCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | GCTGCCTCTAAACAATGGGGCTGGGCTACGTACCTAAGGTCTCTTCTGAGGACTAGAGCCGGGGCAGGGTaGATCCCTGCTTTGCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: AASKQWGWATYLRSLLRTRAGAG*IPALLP Trigger: AGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCT...AGTCCTCAGAAGAGACCTTAGGTACGTAGCCCAGCCCCATTGTTTAGAGGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 90 bp | GGGCGCTTGTGGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTaGTTATTGCAGATCAGGGTGGAGAGGCCTAAGGCAAGAGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: GRLWDAGCLPWNLAS*LLQIRVERPKARGE Trigger: CTCTCCTCTTGCCTTAGGCCTCTCCACCCTGATCTGCAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR GCA 90 bp | ACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCATCCGGGTCGCTTCCTTGTTATTaGAGATCAGGGTGGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: TEPGGRPLANPRPHFPSGSLPCY*RSGWRG Trigger: GCCTCTCCACCCTGATCTGCAATAACAAGGAAGCGA...CCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | GCCTCACTTCCCATCCGGGGAGCTCTCCTATACCCCACAAGCCAGCTCAAAGGGGGTTTGCTACTTACCTaGCATATGTGGCCCTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: ASLPIRGALLYPTSQLKGGLLLT*HMWPCV Trigger: GACACAGGGCCACATATGCCAGGTAAGTAGCAAACC...CCCTTTGAGCTGGCTTGTGGGGTATAGGAGAGCTCCCCGGATGGGAAGTGAGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 90 bp | ACAAGGGAGAAGCCTCCCACACAGGATCTCAACAGAGAGGGGCGCTaGTGGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTTGTTA | + |
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Preference number: 2 (lower is better) Translates to: TREKPPTQDLNREGR*WDAGCLPWNLASLL Trigger: TAACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTGTTGAGATCCTGTGTGGGAGGCTTCTCCCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR TCA 90 bp | AGACCTCTAGCTAACCCGAGGCCTCACTTCCCATCCGGGGAGCTCTCCTATACCTGGAACCTCCTTGAATaGCCCGGAACTTTTTGGAGG | + |
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Preference number: 2 (lower is better) Translates to: RPLANPRPHFPSGELSYTWNLLE*PGTFWR Trigger: CCTCCAAAAAGTTCCGGGTCATTCAAGGAGGTTCCA...GGTATAGGAGAGCTCCCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | ACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCATCCGGGAATAGCTCTCCCTCCTaGGTTCAAAGTTCCCATCAG | + |
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Preference number: 2 (lower is better) Translates to: TEPGGRPLANPRPHFPSGNSSPS*VQSSHQ Trigger: CTGATGGGAACTTTGAACCCAGGAGGGAGAGCTATT...CCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTGAGGTGTCTGGACACTTAGACACACATCACACTCCCTCCTCACTTCAGAGGAGGGGCACACATTaGAGCTCTGTTCCCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: PGEVSGHLDTHHTPSSLQRRGTH*SSVPKS Trigger: GCTTTTGGGAACAGAGCTCCAATGTGTGCCCCTCCT...CTGAAGTGAGGAGGGAGTGTGATGTGTGTCTAAGTGTCCAGACACCTCACCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR GCA 90 bp | GGAGGGGTTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGCTGTTATCAACCCAGTaGCTGTCCTTTGCCAGTTTC | + |
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Preference number: 2 (lower is better) Translates to: GGVCYLPGICGPVSTREVLLSTQ*LSFASF Trigger: GAAACTGGCAAAGGACAGGCACTGGGTTGATAACAG...CACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAACCCCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR TCA 72 bp | AAGGAGGGCCTAATGGCCCCAGGTGGGCCAGGGCAGTaGTGGGGGCCTTCTGAGACTCGGCTCTTGGCAGGA | + |
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Preference number: 3 (lower is better) Translates to: KEGLMAPGGPGQ*WGPSETRLLAG Trigger: TCCTGCCAAGAGCCGAGTCTCAGAAGGCCCCCATCACTGCCCTGGCCCACCTGGGGCCATTAGGCCCTCCTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | AGGGAGCAGCTGGGCTGTGCATGGACTCCATTGCCCTaGGGACACAGGAGTGCCGAGCCTCCTGTTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: REQLGCAWTPLP*GHRSAEPPVPQ Trigger: CTGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | TGTGGAGTGCTCTGGAGGGAGCAGCTGGGCTGTGCATaGACTCCATTGCCCTGGGGACACAGGAGTGCCGAG | + |
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Preference number: 3 (lower is better) Translates to: CGVLWREQLGCA*TPLPWGHRSAE Trigger: CTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 72 bp | TGTCTGGGCCTCCTAGTCTACGCTACTCCTTCCCACTaGCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGG | + |
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Preference number: 3 (lower is better) Translates to: CLGLLVYATPSH*RAETAPCPQYG Trigger: CCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCGTAGACTAGGAGGCCCAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| 3UTR GCA 72 bp | CTGTGCATGGACTCCATTGCCCTGGGGACACAGGAGTaGCGAGCCTCCTGTTCCCCAGCCATCTGCTCCCTT | + |
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Preference number: 3 (lower is better) Translates to: LCMDSIALGTQE*RASCSPAICSL Trigger: AAGGGAGCAGATGGCTGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTCCATGCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 72 bp | CCCAAAGGAGAGCCGGGGCAGGGTGGATCCCTGCTTTaGTGCCTAAGAACCGGAGCCAACAGCAGGTACCTC | + |
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Preference number: 3 (lower is better) Translates to: PKGEPGQGGSLL*CLRTGANSRYL Trigger: GAGGTACCTGCTGTTGGCTCCGGTTCTTAGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCTCCTTTGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | AGCGCCAGGAGTGTTCAGGTTCCAGAGCTCAGAGTCTaGCCCACAAGCTCCCAGCCTTTGTCAGGGGCCTCG | + |
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Preference number: 3 (lower is better) Translates to: SARSVQVPELRV*PTSSQPLSGAS Trigger: CGAGGCCCCTGACAAAGGCTGGGAGCTTGTGGGCCAGACTCTGAGCTCTGGAACCTGAACACTCCTGGCGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | CTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGGTaGCACCCCAGGAGAGTAGGACCAGGCCCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LAYVALCPLGKW*HPRRVGPGPGA Trigger: TGCTCCAGGGCCTGGTCCTACTCTCCTGGGGTGCCACCACTTCCCTAGTGGACACAGGGCCACATATGCCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | GGGTCCCAACCCAACCGACAGAGACAGTACCAGCGGTaGCAAGAGCAGAGGCTGACCCAGTCCGAGTCCTGT | + |
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Preference number: 3 (lower is better) Translates to: GSQPNRQRQYQR*QEQRLTQSESC Trigger: ACAGGACTCGGACTGGGTCAGCCTCTGCTCTTGCCACCGCTGGTACTGTCTCTGTCGGTTGGGTTGGGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR-3UTR CAA 90 bp | CAGAGAGGGGCGCTTGTGGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTTACAAGCTCCCAGCCTTaGTCAGGGGCCTCGGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QRGALVGCGMSTVESRFLTSSQP*SGASAP Trigger: AGGAGCCGAGGCCCCTGACAAAGGCTGGGAGCTTGT...AAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR GCA 72 bp | AAAGGAGAGCCGGGGCAGGGTGGATCCCTGCTTTGCTaGCTAAGAACCGGAGCCAACAGCAGGTACCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: KGEPGQGGSLLC*LRTGANSRYLL Trigger: CAGGAGGTACCTGCTGTTGGCTCCGGTTCTTAGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCTCCTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CCA 72 bp | TACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTaGTGGCACCCCAGGAGAGTAGGACCAGGCCCTGGA | + |
|
Preference number: 3 (lower is better) Translates to: YLAYVALCPLGK*WHPRRVGPGPG Trigger: TCCAGGGCCTGGTCCTACTCTCCTGGGGTGCCACCACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | TCTTGTGTAGGGTCCCAAAGGAGAGCCGGGGCAGGGTaGATCCCTGCTTTGCTGCCTAAGAACCGGAGCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SCVGSQRRAGAG*IPALLPKNRSQ Trigger: TTGGCTCCGGTTCTTAGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCTCCTTTGGGACCCTACACAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | CCTCCCACACAGGATCTCAACAGAGAGGGGCGCTTGTaGGATGCGGGATGTCTACCGTGGAATCTCGCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: PPTQDLNREGRL*DAGCLPWNLAS Trigger: GGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTGTTGAGATCCTGTGTGGGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | AGGCTGACCCAGTCCGAGTCCTGTTCCAGGTCAGGCTaGTTGCTGCCTCTAAACAATGGGGCTGGGCTACGT | + |
|
Preference number: 3 (lower is better) Translates to: RLTQSESCSRSG*LLPLNNGAGLR Trigger: ACGTAGCCCAGCCCCATTGTTTAGAGGCAGCAACCAGCCTGACCTGGAACAGGACTCGGACTGGGTCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | TACTGCGTGAGAACAACCCAGGCTCTGCCCCAGAACTaGACACTGTTGCCAGCCACCAGGACTGTCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: YCVRTTQALPQN*TLLPATRTVLW Trigger: CCACAGGACAGTCCTGGTGGCTGGCAACAGTGTCCAGTTCTGGGGCAGAGCCTGGGTTGTTCTCACGCAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR-3UTR CAA 90 bp | GCCTCACTTCCCATCCGGGGAGCTCTCCTATACCCCACAAGCCAGCTCAAAGGGGGCAGGAGGAGGGGTTaGCTACTTACCTGGCATATG | + |
|
Preference number: 3 (lower is better) Translates to: ASLPIRGALLYPTSQLKGGRRRG*LLTWHM Trigger: CATATGCCAGGTAAGTAGCAAACCCCTCCTCCTGCC...CCCTTTGAGCTGGCTTGTGGGGTATAGGAGAGCTCCCCGGATGGGAAGTGAGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR-3UTR CAA 90 bp | CAGAGGCCTGGCTCTTGGCAGCTGCCTGGTGAGGTGTCTGGACACTTAGACACACAGGAGGGGCACACATaGGAGCTCTGTTCCCAAAAG | + |
|
Preference number: 3 (lower is better) Translates to: QRPGSWQLPGEVSGHLDTQEGHT*ELCSQK Trigger: CTTTTGGGAACAGAGCTCCAATGTGTGCCCCTCCTG...TGTGTCTAAGTGTCCAGACACCTCACCAGGCAGCTGCCAAGAGCCAGGCCTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | GCTAGCCAGCCAGCCCCAAGATGGAACCTCCTTGAATaGCCCGGAACTTTTTGGAGGGACCCTAGGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: ASQPAPRWNLLE*PGTFWRDPRRG Trigger: GCCTCTCCTAGGGTCCCTCCAAAAAGTTCCGGGTCATTCAAGGAGGTTCCATCTTGGGGCTGGCTGGCTAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR GCA 72 bp | GGAGTAGCTGTCACAACTGTTTCCCTGCTTGTGGAGTaGTCTGGAGGGAGCAGCTGGGCTGTGCATGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: GVAVTTVSLLVE*SGGSSWAVHGL Trigger: GAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAAACAGTTGTGACAGCTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | CAGGGCAGTGATGGGGGCCTTCTGAGACTCGGCTCTTaGCAGGAGGAGGGGTTTGCTACTTACCTGGCATAT | + |
|
Preference number: 3 (lower is better) Translates to: QGSDGGLLRLGS*QEEGFATYLAY Trigger: ATATGCCAGGTAAGTAGCAAACCCCTCCTCCTGCCAAGAGCCGAGTCTCAGAAGGCCCCCATCACTGCCCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | GTGAGGGACACACAGGCTGGGACAGGTGTCAATAGATaGTTTGGCCTGCCCTGGGGTGAGACAGAGATGCAC | + |
|
Preference number: 3 (lower is better) Translates to: VRDTQAGTGVNR*FGLPWGETEMH Trigger: GTGCATCTCTGTCTCACCCCAGGGCAGGCCAAATCATCTATTGACACCTGTCCCAGCCTGTGTGTCCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | AGCTGTCACAACTGTTTCCCTGCTTGTGGAGTGCTCTaGAGGGAGCAGCTGGGCTGTGCATGGACTCCATTG | + |
|
Preference number: 3 (lower is better) Translates to: SCHNCFPACGVL*REQLGCAWTPL Trigger: CAATGGAGTCCATGCACAGCCCAGCTGCTCCCTCCAGAGCACTCCACAAGCAGGGAAACAGTTGTGACAGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | GCTAAAACAGAGGCCTGGCTCTTGGCAGCTGCCTGGTaGGGTGTCTGGACACTTAGACACACATCACACTCC | + |
|
Preference number: 3 (lower is better) Translates to: AKTEAWLLAAAW*GVWTLRHTSHS Trigger: GGAGTGTGATGTGTGTCTAAGTGTCCAGACACCTCACCAGGCAGCTGCCAAGAGCCAGGCCTCTGTTTTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR GCA 72 bp | CACACAGGATCTCAACAGAGAGGGGCGCTTGTGGGATaGGGGATGTCTACCGTGGAATCTCGCTTCCTTGTT | + |
|
Preference number: 3 (lower is better) Translates to: HTGSQQRGALVG*GMSTVESRFLV Trigger: AACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCACAAGCGCCCCTCTCTGTTGAGATCCTGTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | CAGGTCAGGCTGGTTGCTGCCTCTAAACAATGGGGCTaGGCTACGTACCTAAGGTCTCTTCTGAGGACTACC | + |
|
Preference number: 3 (lower is better) Translates to: QVRLVAASKQWG*ATYLRSLLRTT Trigger: GGTAGTCCTCAGAAGAGACCTTAGGTACGTAGCCCAGCCCCATTGTTTAGAGGCAGCAACCAGCCTGACCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAGGAAGCCAGAGTATTTACAAACACATGGGGTAGGAGAGGCGAGACAGGGCAGAACTGGACACTGTaGCCAGCCACCAGGACTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PKEARVFTNTWGRRGETGQNWTL*PATRTV Trigger: GACAGTCCTGGTGGCTGGCAACAGTGTCCAGTTCTG...CCCTGTCTCGCCTCTCCTACCCCATGTGTTTGTAAATACTCTGGCTTCCTTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | CTGAAAGGGTACTGGCCTAGAACCCAGGCTGACATGTaGCGGCAACAGAAACCCAGGAGTAGCTGTCACAAC | + |
|
Preference number: 3 (lower is better) Translates to: LKGYWPRTQADM*RQQKPRSSCHN Trigger: GTTGTGACAGCTACTCCTGGGTTTCTGTTGCCGTCACATGTCAGCCTGGGTTCTAGGCCAGTACCCTTTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | CACTTAGACACACATCACACTCCCTCCTCACTTCAGTaGCCTGCTCTGCCCCTGAAAGGGTACTGGCCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: HLDTHHTPSSLQ*PALPLKGYWPR Trigger: TCTAGGCCAGTACCCTTTCAGGGGCAGAGCAGGTCACTGAAGTGAGGAGGGAGTGTGATGTGTGTCTAAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR GCA 72 bp | CGGGATGTCTACCGTGGAATCTCGCTTCCTTGTTATTaGAGATCAGGGTGGAGAGGCCTAAGGCAAGAGGAG | + |
|
Preference number: 3 (lower is better) Translates to: RDVYRGISLPCY*RSGWRGLRQEE Trigger: CTCCTCTTGCCTTAGGCCTCTCCACCCTGATCTGCAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR CCA 72 bp | TGCCCGACACCAAAGCCCCCTTTCTGTGCCCAGGTTTaGATGGAATACTGTAGGGTTATCTGCCAAGGGGTA | + |
|
Preference number: 3 (lower is better) Translates to: CPTPKPPFCAQV*MEYCRVICQGV Trigger: TACCCCTTGGCAGATAACCCTACAGTATTCCATCCAAACCTGGGCACAGAAAGGGGGCTTTGGTGTCGGGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR-3UTR CAA 90 bp | ACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCATCCGGGTCCTGCACACAACTTTaGCTACATTTAAAGGGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: TEPGGRPLANPRPHFPSGSCTQL*LHLKGL Trigger: CAAGCCCTTTAAATGTAGCAAAAGTTGTGTGCAGGA...CCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR GCA 72 bp | TTGCCAGTTTCTAAGGATCGATCTCATGCCCATATCTaGCCGACACCAAAGCCCCCTTTCTGTGCCCAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: LPVSKDRSHAHI*PTPKPPFCAQV Trigger: AACCTGGGCACAGAAAGGGGGCTTTGGTGTCGGGCAGATATGGGCATGAGATCGATCCTTAGAAACTGGCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR TCA 72 bp | CCTCCTGGGTTCAAAGTTCCCATCAGCAGGAAGAAGTaGGGGGTATCACTAGATAATCGGGTCTGTTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: PPGFKVPISRKK*GVSLDNRVCSC Trigger: GCAGGAACAGACCCGATTATCTAGTGATACCCCTCACTTCTTCCTGCTGATGGGAACTTTGAACCCAGGAGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| 3UTR GCA 72 bp | ATAGATGATTTGGCCTGCCCTGGGGTGAGACAGAGATaGACACATATGTGTGCGTACGTGAACAAACTGTAC | + |
|
Preference number: 3 (lower is better) Translates to: IDDLACPGVRQR*THMCAYVNKLY Trigger: GTACAGTTTGTTCACGTACGCACACATATGTGTGCATCTCTGTCTCACCCCAGGGCAGGCCAAATCATCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | CGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGGGTCCTGCCCGGGGGTaGAGGCGGAGCCAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RAETAPCPQYGLERAASPGPARG*RRSQTS Trigger: GCTGGTCTGGCTCCGCCTGCACCCCCGGGCAGGACC...CGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR CCA 90 bp | TCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGGGGCACACCTGCACCTaGTACAGGGGCGGCCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPVRVRARGFPAAAALGHTCT*YRGGPR Trigger: CCGGGGGCCGCCCCTGTACCAGGTGCAGGTGTGCCC...CAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | CGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGGGGCCCTACGCTGGGTaGGGAAGGCCGCGAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAETAPCPQYGLERAASPGPYAG*GRPRAA Trigger: AGCGGCTCGCGGCCTTCCCCACCCAGCGTAGGGCCC...CGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCAGCGGGCCAGCCCCAGCTGCTaGACACAGCGCTTCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVRARGFPAAAALQRASPSC*TQRFTV Trigger: CACGGTGAAGCGCTGTGTGCAGCAGCTGGGGCTGGC...CCGCTGCAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | TTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCAGTCGGCGCGGCCAGCCTaGCACACCTCGGGTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LSPVRVRARGFPAAAALQSARPA*HTSGAV Trigger: CACAGCACCCGAGGTGTGCCAGGCTGGCCGCGCCGA...CTGCAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCAGCGGCACAGTGCGCTTGAGTaGCCCGGGAGCCTCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVRARGFPAAAALQRHSALE*PGSLKA Trigger: CGCCTTGAGGCTCCCGGGCCACTCAAGCGCACTGTG...CCGCTGCAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR CCA 90 bp | GACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGGGCCCTACGCTGGGTaGGGAAGGCCGCGAGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DCSLSPVRVRARGFPAAAGPYAG*GRPRAA Trigger: AGCGGCTCGCGGCCTTCCCCACCCAGCGTAGGGCCC...AGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCAGCGGAGATCTCGATGGCCGTaGCCAGTACCACCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SPVRVRARGFPAAAALQRRSRWP*PVPPAL Trigger: AAGGGCAGGTGGTACTGGCCACGGCCATCGAGATCT...CCGCTGCAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR CCA 90 bp | CTAGCTAACCCGAGGCCTCACTTCCCATCCGGGGAGCTCTCCTATACCCCACAAACGGCGCCACTGCGATaGCAGCCCCGGCAGGCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LANPRPHFPSGELSYTPQTAPLR*QPRQAT Trigger: GGTCGCCTGCCGGGGCTGCCATCGCAGTGGCGCCGT...TTGTGGGGTATAGGAGAGCTCCCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR TCA 90 bp | CGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCTTGCATGTCTTCTGTaGGGAGGGGCACACCTGCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAETAPCPQYGLERAASPLACLL*GGAHLH Trigger: GTGCAGGTGTGCCCCTCCTCACAGAAGACATGCAAG...CGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCCACCTGAGGAGGGATaGTGTCAAACAGGTCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLSPVRVRARGFPAAAALPPEEG*CQTGPQ Trigger: CTGGGGACCTGTTTGACATCATCCCTCCTCAGGTGG...CAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR TCA 90 bp | TCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGGCACATTCTCGGGCTTaGTGTCACGGTGCACCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SLSPVRVRARGFPAAAALAHSRA*CHGAPA Trigger: AGCTGGTGCACCGTGACATCAAGCCCGAGAATGTGC...CAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | TCTACGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGAGGAGGGGCACACCTaGACCTGGTACAGGGGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLLLPTAAQRLLLVPSTEEGHT*TWYRGG Trigger: GCCGCCCCTGTACCAGGTGCAGGTGTGCCCCTCCTC...CGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCGTAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | CCAGGAGTGTTCAGGTTCCAGAGCTCAGAGTCTGGCCCACAAGCTCCCAGCCTTGGCAGGCGACCCCGCTaGCAGCGCACGAACTCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: PGVFRFQSSESGPQAPSLGRRPR*QRTNSS Trigger: CGAGGAGTTCGTGCGCTGGCAGCGGGGTCGCCTGCC...AAGGCTGGGAGCTTGTGGGCCAGACTCTGAGCTCTGGAACCTGAACACTCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | CGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTGTAAAACGGCGCCACTaGGATGGCAGCCCCGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RYSFPLPRRDCSLSPVRVVKRRH*DGSPGR Trigger: CCTGCCGGGGCTGCCATCGCAGTGGCGCCGTTTTAC...AACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR TCA 90 bp | CGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGACGACAGGCTGTTGGTaGTGCTCACCTCACGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RAETAPCPQYGLERAASPTTGCW*CSPHAE Trigger: TTCTGCGTGAGGTGAGCATCACCAACAGCCTGTCGT...CGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR GCA 90 bp | TCTACGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGAGCGCCAGCCCCAGCTaGTGCACACAGCGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: STLLLPTAAQRLLLVPSTSASPS*CTQRFT Trigger: GGTGAAGCGCTGTGTGCAGCAGCTGGGGCTGGCGCT...CGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCGTAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | GCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTACACAGTGCGCTTGAGTaGCCCGGGAGCCTCAAGGCG | + |
|
Preference number: 4 (lower is better) Translates to: ATPSHCRAETAPCPQYGLHSALE*PGSLKA Trigger: CGCCTTGAGGCTCCCGGGCCACTCAAGCGCACTGTG...TAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR GCA 90 bp | CGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTGGCTTGATGTCACGGTaGACCAGCTGCCTGCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RYSFPLPRRDCSLSPVRVGLMSR*TSCLLC Trigger: GCACAGCAGGCAGCTGGTGCACCGTGACATCAAGCC...AACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | GCCTCACTTCCCATCCGGGGAGCTCTCCTATACCCCACAAGCCAGCTCAAAGGGAGCGCCAGAAGCCGCTaGAACATACGCAGCGCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLPIRGALLYPTSQLKGSARSR*NIRSAG Trigger: GCCTGCGCTGCGTATGTTCCAGCGGCTTCTGGCGCT...CCCTTTGAGCTGGCTTGTGGGGTATAGGAGAGCTCCCCGGATGGGAAGTGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR CCA 90 bp | GACTCCATTGCCCTGGGGACACAGGAGTGCCGAGCCTCCTGTTCCCCAGCCATCAGATCTCGATGGCCGTaGCCAGTACCACCTGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: DSIALGTQECRASCSPAIRSRWP*PVPPAL Trigger: AAGGGCAGGTGGTACTGGCCACGGCCATCGAGATCT...GATGGCTGGGGAACAGGAGGCTCGGCACTCCTGTGTCCCCAGGGCAATGGAGTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | GACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTTCGGATGTGAGCTCGTaGTTGAGGAAGCGAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: DCSLSPVRVRARGFPAAASDVSS*LRKRKT Trigger: GGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGA...AGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
||
| CDS-3UTR GCA 90 bp | CAAAAGCCTCGTGGCTGCAGTAATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATGGTCCTGCCCGGGGGTaGAGGCGGAGCCAGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKPRGCSNSSPSWVQSSHGPARG*RRSQTS Trigger: GCTGGTCTGGCTCCGCCTGCACCCCCGGGCAGGACC...ATGGGAACTTTGAACCCAGGAGGGAGAGCTATTACTGCAGCCACGAGGCTTTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
||
| CDS-3UTR GCA 90 bp | TACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGACTTTACTCTTGTCCGTaGGGCCGTCGGTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: YSFPLPRRDCSLSPVRVRLYSCP*GRRSCP Trigger: CGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAG...TCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS-3UTR CCA 90 bp | TCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGAGACGCAGATCTCGATaGCCGTGGCCAGTACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: SFPLPRRDCSLSPVRVRARRRSR*PWPVPP Trigger: AGGTGGTACTGGCCACGGCCATCGAGATCTGCGTCT...CGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| 3UTR CAA 72 bp | TCCCAAAGGAGAGCCGGGGCAGGGTGGATCCCTGCTTaGCTGCCTAAGAACCGGAGCCAACAGCAGGTACCT | + |
|
Preference number: 4 (lower is better) Translates to: SQRRAGAGWIPA*LPKNRSQQQVP Trigger: AGGTACCTGCTGTTGGCTCCGGTTCTTAGGCAGCAAAGCAGGGATCCACCCTGCCCCGGCTCTCCTTTGGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR GCA 90 bp | ACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCATCCGGGTCACGGTGCACCAGCTaGCTGCTGTGCATGAAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TEPGGRPLANPRPHFPSGSRCTS*LLCMKS Trigger: GGACTTCATGCACAGCAGGCAGCTGGTGCACCGTGA...CCCGGATGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR GCA 90 bp | GGAGGGGTTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGCGCTGGCAGCCAGTGTaGGTAGGGTCAGCGCTTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GGVCYLPGICGPVSTREVRWQPV*VGSALA Trigger: TGCAAGCGCTGACCCTACGCACACTGGCTGCCAGCG...CACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAACCCCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR GCA 90 bp | CGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTTCGGATGTGAGCTCGTaGTTGAGGAAGCGAAAGACC | + |
|
Preference number: 4 (lower is better) Translates to: RYSFPLPRRDCSLSPVRVSDVSS*LRKRKT Trigger: GGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGA...AACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS-3UTR GCA 90 bp | AAGGGCTTGGCCTCTTCCTCTGACCTCCTGGAGACCACTGTTATCAACCCAGTGCTTTACTCTTGTCCGTaGGGCCGTCGGTCCTGCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGLASSSDLLETTVINPVLYSCP*GRRSCP Trigger: CGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAG...CACTGGGTTGATAACAGTGGTCTCCAGGAGGTCAGAGGAAGAGGCCAAGCCCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR CCA 90 bp | GGGGTTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGGTGCTTCACCGTGTCCTCTaGGAGCCCCACCTGAGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVCYLPGICGPVSTREVVLHRVL*EPHLRR Trigger: CCTCCTCAGGTGGGGCTCCCAGAGGACACGGTGAAG...CACCACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR CCA 90 bp | CCAACAGCAGGTACCTCCTGGGGTTCCCTGAGGAGTGTGCTAAAACAGAGGCCTAGACGCAGATCTCGATaGCCGTGGCCAGTACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: PTAGTSWGSLRSVLKQRPRRRSR*PWPVPP Trigger: AGGTGGTACTGGCCACGGCCATCGAGATCTGCGTCT...AGGCCTCTGTTTTAGCACACTCCTCAGGGAACCCCAGGAGGTACCTGCTGTTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 72 bp | AGCCATCTGCTCCCTTACTCCCAGGAGGGGCACACATaGGAGCTCTGTTCCCAAAAGCCTCGTGGCTGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SHLLPYSQEGHT*ELCSQKPRGCS Trigger: ACTGCAGCCACGAGGCTTTTGGGAACAGAGCTCCAATGTGTGCCCCTCCTGGGAGTAAGGGAGCAGATGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR TCA 90 bp | AAGGGCTTGGCCTCTTCCTCTGACCTCCTGGAGACCACTGTTATCAACCCAGTGTCTGGGAGCCCCACCTaGGGAGGGATGATGTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KGLASSSDLLETTVINPVSGSPT*GGMMSN Trigger: GTTTGACATCATCCCTCCTCAGGTGGGGCTCCCAGA...CACTGGGTTGATAACAGTGGTCTCCAGGAGGTCAGAGGAAGAGGCCAAGCCCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR GCA 90 bp | GTGGCTGCAGTAATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATCAGCAGGAAGACCAGCTGCCTGCTGTaGATGAAGTCCAGCGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VAAVIALPPGFKVPISRKTSCLL*MKSSAS Trigger: GCTGGCGCTGGACTTCATGCACAGCAGGCAGCTGGT...CTTCCTGCTGATGGGAACTTTGAACCCAGGAGGGAGAGCTATTACTGCAGCCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR GCA 90 bp | CCTGGTGAGGTGTCTGGACACTTAGACACACATCACACTCCCTCCTCACTTCAGCAGGTCCCCAGCAGGTaGATACTCCTGGGCAAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: PGEVSGHLDTHHTPSSLQQVPSR*ILLGKD Trigger: GTCTTTGCCCAGGAGTATGCACCTGCTGGGGACCTG...CTGAAGTGAGGAGGGAGTGTGATGTGTGTCTAAGTGTCCAGACACCTCACCAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR TCA 90 bp | GTGGCTGCAGTAATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATCAGCAGGAAGACGACAGGCTGTTGGTaGTGCTCACCTCACGCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VAAVIALPPGFKVPISRKTTGCW*CSPHAE Trigger: TTCTGCGTGAGGTGAGCATCACCAACAGCCTGTCGT...CTTCCTGCTGATGGGAACTTTGAACCCAGGAGGGAGAGCTATTACTGCAGCCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 72 bp | GCGGGATGTCTACCGTGGAATCTCGCTTCCTTGTTATaGCAGATCAGGGTGGAGAGGCCTAAGGCAAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGCLPWNLASLL*QIRVERPKARG Trigger: TCCTCTTGCCTTAGGCCTCTCCACCCTGATCTGCAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 72 bp | TGGGATGCGGGATGTCTACCGTGGAATCTCGCTTCCTaGTTATTGCAGATCAGGGTGGAGAGGCCTAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: WDAGCLPWNLAS*LLQIRVERPKA Trigger: TGCCTTAGGCCTCTCCACCCTGATCTGCAATAACAAGGAAGCGAGATTCCACGGTAGACATCCCGCATCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 72 bp | TGTTCCTGCACACAACTTTTGCTACATTTAAAGGGCTaGGCCTCTTCCTCTGACCTCCTGGAGACCACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: CSCTQLLLHLKG*ASSSDLLETTV Trigger: AACAGTGGTCTCCAGGAGGTCAGAGGAAGAGGCCAAGCCCTTTAAATGTAGCAAAAGTTGTGTGCAGGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| 3UTR CAA 72 bp | TCACTAGATAATCGGGTCTGTTCCTGCACACAACTTTaGCTACATTTAAAGGGCTTGGCCTCTTCCTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLDNRVCSCTQL*LHLKGLASSSD Trigger: GTCAGAGGAAGAGGCCAAGCCCTTTAAATGTAGCAAAAGTTGTGTGCAGGAACAGACCCGATTATCTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS CCA 90 bp | CGCAGGGACCCTGGCAGGCGGTCCCCAGGCGGCTTGCGTGCGCGGTaGGAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTGCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RRDPGRRSPGGLRAR*EGRRRSSDVSSCLR Trigger: CCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTCCCACCGCGCACGCAAGCCGCCTGGGGACCGCCTGCCAGGGTCCCTGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 90 bp | AGGCCGCGAGCCGCTGCCACTCTCGGTGAGCACAGTGCGCTTGAGTaGCCCGGGAGCCTCAAGGCGCAGGGACCCTGGCAGGCGGTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPRAAATLGEHSALE*PGSLKAQGPWQAVP Trigger: GGGGACCGCCTGCCAGGGTCCCTGCGCCTTGAGGCTCCCGGGCCACTCAAGCGCACTGTGCTCACCGAGAGTGGCAGCGGCTCGCGGCCT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 90 bp | GCCCGGGGGTGCAGGCGGAGCCAGACCAGCCTCAGGCACGGGTACTaGAACTGGCACTGGCACGGGTACCACGGGCCCTACGCTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARGCRRSQTSLRHGY*NWHWHGYHGPYAGW Trigger: CCACCCAGCGTAGGGCCCGTGGTACCCGTGCCAGTGCCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCTGCACCCCCGGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS-3UTR CAA 90 bp | TCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCGGTCCCCAGGCGGCTaGCGTGCGCGGTGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SLSPVRVRARGFPAAAALRSPGG*RARWEG Trigger: GCCTTCCCACCGCGCACGCAAGCCGCCTGGGGACCG...CAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS CCA 90 bp | ACGTCCACGCCCGTGTCCACCGCGAAGCCATCGGCGCGGCCAGCCTaGCACACCTCGGGTGCTGTGTACGGTATAGTGCCGCTCACGCGC | + |
|
Preference number: 5 (lower is better) Translates to: TSTPVSTAKPSARPA*HTSGAVYGIVPLTR Trigger: GCGCGTGAGCGGCACTATACCGTACACAGCACCCGAGGTGTGCCAGGCTGGCCGCGCCGATGGCTTCGCGGTGGACACGGGCGTGGACGT 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CCA 90 bp | AGGCGGAGCCAGACCAGCCTCAGGCACGGGTACTGGAACTGGCACTaGCACGGGTACCACGGGCCCTACGCTGGGTGGGGAAGGCCGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RRSQTSLRHGYWNWH*HGYHGPYAGWGRPR Trigger: TCGCGGCCTTCCCCACCCAGCGTAGGGCCCGTGGTACCCGTGCCAGTGCCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 90 bp | GGGTGCAGGCGGAGCCAGACCAGCCTCAGGCACGGGTACTGGAACTaGCACTGGCACGGGTACCACGGGCCCTACGCTGGGTGGGGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: GCRRSQTSLRHGYWN*HWHGYHGPYAGWGR Trigger: CCTTCCCCACCCAGCGTAGGGCCCGTGGTACCCGTGCCAGTGCCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCTGCACCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS GCA 90 bp | GTCCACCGCGAAGCCATCGGCGCGGCCAGCCTGGCACACCTCGGGTaGTGTGTACGGTATAGTGCCGCTCACGCGCTTCACACGGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VHREAIGAASLAHLG*CVRYSAAHALHTAA Trigger: GGCTGCCGTGTGAAGCGCGTGAGCGGCACTATACCGTACACAGCACCCGAGGTGTGCCAGGCTGGCCGCGCCGATGGCTTCGCGGTGGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 90 bp | CTGCCCTTTACTCTTGTCCGTGCGGCCGTCGGTCCTGCCCGGGGGTaGAGGCGGAGCCAGACCAGCCTCAGGCACGGGTACTGGAACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LPFTLVRAAVGPARG*RRSQTSLRHGYWNW Trigger: CCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCTGCACCCCCGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAGGGCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS GCA 90 bp | TCTCGATGGCCGTGGCCAGTACCACCTGCCCTTTACTCTTGTCCGTaGGGCCGTCGGTCCTGCCCGGGGGTGCAGGCGGAGCCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: SRWPWPVPPALYSCP*GRRSCPGVQAEPDQ Trigger: CTGGTCTGGCTCCGCCTGCACCCCCGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAGGGCAGGTGGTACTGGCCACGGCCATCGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS-3UTR CAA 90 bp | TCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGGTCCCCAGGCGGCTaGCGTGCGCGGTGGGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFPLPRRDCSLSPVRVRARSPGG*RARWEG Trigger: GCCTTCCCACCGCGCACGCAAGCCGCCTGGGGACCG...CGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS-3UTR CAA 90 bp | CGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGGTGAGCACAGTGCGCTaGAGTGGCCCGGGAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RAETAPCPQYGLERAASPVSTVR*SGPGAS Trigger: TGAGGCTCCCGGGCCACTCAAGCGCACTGTGCTCAC...CGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS GCA 90 bp | GCCACAGCATCATCCCCAGACAGGACGCGGTTCTCTGAGCCAGTGTaGTCCAGGGTCAGCAGCCTGTCGGCCTCAGGACCCCGGACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ATASSPDRTRFSEPV*SRVSSLSASGPRTC Trigger: GCAGGTCCGGGGTCCTGAGGCCGACAGGCTGCTGACCCTGGAGCACACTGGCTCAGAGAACCGCGTCCTGTCTGGGGATGATGCTGTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS CCA 90 bp | TCCTTGGCGGGCCCACGCCGCTCAGGCTCTAGCGCCAGAAGCCGCTaGAACATACGCAGCGCAGGCTCGGTAAAACGGCGCCACTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: SLAGPRRSGSSARSR*NIRSAGSVKRRHCD Trigger: ATCGCAGTGGCGCCGTTTTACCGAGCCTGCGCTGCGTATGTTCCAGCGGCTTCTGGCGCTAGAGCCTGAGCGGCGTGGGCCCGCCAAGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS TCA 90 bp | GTTGGTGGCCGCCACAGCATCATCCCCAGACAGGACGCGGTTCTCTaGGCCAGTGTGCTCCAGGGTCAGCAGCCTGTCGGCCTCAGGACC | + |
|
Preference number: 5 (lower is better) Translates to: VGGRHSIIPRQDAVL*ASVLQGQQPVGLRT Trigger: GGTCCTGAGGCCGACAGGCTGCTGACCCTGGAGCACACTGGCTCAGAGAACCGCGTCCTGTCTGGGGATGATGCTGTGGCGGCCACCAAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS-3UTR CAA 90 bp | CTACGCTACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTGAGCACAGTGCGCTaGAGTGGCCCGGGAGCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: LRYSFPLPRRDCSLSPVRVSTVR*SGPGAS Trigger: TGAGGCTCCCGGGCCACTCAAGCGCACTGTGCTCAC...CCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTAGCGTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS-3UTR CAA 90 bp | GACTGCTCCTTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTCTAGACGACAGGCTGTaGGTGATGCTCACCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: DCSLSPVRVRARGFPAAALDDRL*VMLTSR Trigger: GCGTGAGGTGAGCATCACCAACAGCCTGTCGTCTAG...AGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAAGGAGCAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 |
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| CDS GCA 90 bp | CCGCTGCCAGCGCACGAACTCCTCGAAGAAGGCATCCGCACCCGATaGAGCCTCCCACGGGAAGTTGCCAGTGAGCACACAGAAGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: PLPAHELLEEGIRTR*SLPREVASEHTEDE Trigger: CTCATCTTCTGTGTGCTCACTGGCAACTTCCCGTGGGAGGCTGCATCGGGTGCGGATGCCTTCTTCGAGGAGTTCGTGCGCTGGCAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS-3UTR CAA 90 bp | TTGTCCCCAGTACGGGTTAGAGCGCGCGGCTTCCCCGCAGCAGCTGCGCTGCAGGATGTGAGCTCGTGCTaGAGGAAGCGAAAGACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: LSPVRVRARGFPAAAALQDVSSC*RKRKTL Trigger: CAAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATC...CTGCAGCGCAGCTGCTGCGGGGAAGCCGCGCGCTCTAACCCGTACTGGGGACAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206541.2 |
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| CDS GCA 90 bp | TGCTTGGTAACATCGCTGGCAGCCAGTGTGCGTAGGGTCAGCGCTTaGATGTCTTCTGTGAGGAGGGGCACACCTGCACCTGGTACAGGG | + |
|
Preference number: 5 (lower is better) Translates to: CLVTSLAASVRRVSA*MSSVRRGTPAPGTG Trigger: CCCTGTACCAGGTGCAGGTGTGCCCCTCCTCACAGAAGACATGCAAGCGCTGACCCTACGCACACTGGCTGCCAGCGATGTTACCAAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CCA 90 bp | CGGTTCAGGCTCAGGGCAGCCCACGCTCATCTTCTCCCTCTGCAGTaGAACCTCCTCCAATTCCTCCTCCTCTCTGTGGAAGCAGACCAG | + |
|
Preference number: 5 (lower is better) Translates to: RFRLRAAHAHLLPLQ*NLLQFLLLSVEADQ Trigger: CTGGTCTGCTTCCACAGAGAGGAGGAGGAATTGGAGGAGGTTCCACTGCAGAGGGAGAAGATGAGCGTGGGCTGCCCTGAGCCTGAACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS GCA 90 bp | GAGCCCCACCTGAGGAGGGATGATGTCAAACAGGTCCCCAGCAGGTaGATACTCCTGGGCAAAGACATAGCACTCCTCGGTCTCGAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: EPHLRRDDVKQVPSR*ILLGKDIALLGLED Trigger: GTCTTCGAGACCGAGGAGTGCTATGTCTTTGCCCAGGAGTATGCACCTGCTGGGGACCTGTTTGACATCATCCCTCCTCAGGTGGGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS-3UTR CAA 90 bp | CTGCTCACAGAACCTGGTGGGAGACCTCTAGCTAACCCGAGGCCTCACTTCCCAGATGTGAGCTCGTGCTaGAGGAAGCGAAAGACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLTEPGGRPLANPRPHFPDVSSC*RKRKTS Trigger: GGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATC...TGGGAAGTGAGGCCTCGGGTTAGCTAGAGGTCTCCCACCAGGTTCTGTGAGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR CAA 90 bp | GGAGGGGTTTGCTACTTACCTGGCATATGTGGCCCTGTGTCCACTAGGGAAGTGAGCACATTCTCGGGCTaGATGTCACGGTGCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GGVCYLPGICGPVSTREVSTFSG*MSRCTS Trigger: GCTGGTGCACCGTGACATCAAGCCCGAGAATGTGCT...CACTTCCCTAGTGGACACAGGGCCACATATGCCAGGTAAGTAGCAAACCCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR CAA 90 bp | TACTCCTTCCCACTGCCGCGCAGAGACTGCTCCTTGTCCCCAGTACGGGTTAGAAGGAAGCGAAAGACCTaGATGATGAAGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: YSFPLPRRDCSLSPVRVRRKRKT*MMKGLD Trigger: GTCTAGCCCCTTCATCATCAAGGTCTTTCGCTTCCT...TCTAACCCGTACTGGGGACAAGGAGCAGTCTCTGCGCGGCAGTGGGAAGGAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000206541.2 |
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| CDS-3UTR CAA 90 bp | CAAAAGCCTCGTGGCTGCAGTAATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATCTAGACGACAGGCTGTaGGTGATGCTCACCTCACGC | + |
|
Preference number: 5 (lower is better) Translates to: QKPRGCSNSSPSWVQSSHLDDRL*VMLTSR Trigger: GCGTGAGGTGAGCATCACCAACAGCCTGTCGTCTAG...ATGGGAACTTTGAACCCAGGAGGGAGAGCTATTACTGCAGCCACGAGGCTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS-3UTR CAA 90 bp | GTGGCTGCAGTAATAGCTCTCCCTCCTGGGTTCAAAGTTCCCATCAGCAGGAAGACCACGTCAAAGACCTaGATGATGAAGGGGCTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VAAVIALPPGFKVPISRKTTSKT*MMKGLD Trigger: GTCTAGCCCCTTCATCATCAAGGTCTTTGACGTGGT...CTTCCTGCTGATGGGAACTTTGAACCCAGGAGGGAGAGCTATTACTGCAGCCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000056028.11 |
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| CDS CAA 90 bp | GGAGCCTCAAGGCGCAGGGACCCTGGCAGGCGGTCCCCAGGCGGCTaGCGTGCGCGGTGGGAAGGCCGCCGCCGCAGCTCGGATGTGAGC | + |
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Preference number: 6 (lower is better) Translates to: GASRRRDPGRRSPGG*RARWEGRRRSSDVS Trigger: GCTCACATCCGAGCTGCGGCGGCGGCCTTCCCACCGCGCACGCAAGCCGCCTGGGGACCGCCTGCCAGGGTCCCTGCGCCTTGAGGCTCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | CCTGGCAGGCGGTCCCCAGGCGGCTTGCGTGCGCGGTaGGAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PGRRSPGGLRAR*EGRRRSSDVSS Trigger: CGAGCTCACATCCGAGCTGCGGCGGCGGCCTTCCCACCGCGCACGCAAGCCGCCTGGGGACCGCCTGCCAGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 90 bp | GGGGAAGGCCGCGAGCCGCTGCCACTCTCGGTGAGCACAGTGCGCTaGAGTGGCCCGGGAGCCTCAAGGCGCAGGGACCCTGGCAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: GEGREPLPLSVSTVR*SGPGASRRRDPGRR Trigger: CCGCCTGCCAGGGTCCCTGCGCCTTGAGGCTCCCGGGCCACTCAAGCGCACTGTGCTCACCGAGAGTGGCAGCGGCTCGCGGCCTTCCCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | ACTCTTGTCCGTGCGGCCGTCGGTCCTGCCCGGGGGTaGAGGCGGAGCCAGACCAGCCTCAGGCACGGGTAC | + |
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Preference number: 6 (lower is better) Translates to: TLVRAAVGPARG*RRSQTSLRHGY Trigger: GTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCTGCACCCCCGGGCAGGACCGACGGCCGCACGGACAAGAGT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | TGGCACTGGCACGGGTACCACGGGCCCTACGCTGGGTaGGGAAGGCCGCGAGCCGCTGCCACTCTCGGTGAG | + |
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Preference number: 6 (lower is better) Translates to: WHWHGYHGPYAG*GRPRAAATLGE Trigger: CTCACCGAGAGTGGCAGCGGCTCGCGGCCTTCCCCACCCAGCGTAGGGCCCGTGGTACCCGTGCCAGTGCCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 90 bp | GCGCGGTGGGAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTGCTaGAGGAAGCGAAAGACCTCCTTGGCGGGCCCACGCCGCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: ARWEGRRRSSDVSSC*RKRKTSLAGPRRSG Trigger: GCCTGAGCGGCGTGGGCCCGCCAAGGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTCCCACCGCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | CGCCACTGCGATGGCAGCCCCGGCAGGCGACCCCGCTaGCAGCGCACGAACTCCTCGAAGAAGGCATCCGCA | + |
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Preference number: 6 (lower is better) Translates to: RHCDGSPGRRPR*QRTNSSKKASA Trigger: TGCGGATGCCTTCTTCGAGGAGTTCGTGCGCTGGCAGCGGGGTCGCCTGCCGGGGCTGCCATCGCAGTGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CAA 72 bp | CGCGAGCCGCTGCCACTCTCGGTGAGCACAGTGCGCTaGAGTGGCCCGGGAGCCTCAAGGCGCAGGGACCCT | + |
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Preference number: 6 (lower is better) Translates to: REPLPLSVSTVR*SGPGASRRRDP Trigger: AGGGTCCCTGCGCCTTGAGGCTCCCGGGCCACTCAAGCGCACTGTGCTCACCGAGAGTGGCAGCGGCTCGCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 90 bp | ACGCAGATCTCGATGGCCGTGGCCAGTACCACCTGCCCTTTACTCTaGTCCGTGCGGCCGTCGGTCCTGCCCGGGGGTGCAGGCGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TQISMAVASTTCPLL*SVRPSVLPGGAGGA Trigger: GGCTCCGCCTGCACCCCCGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAGGGCAGGTGGTACTGGCCACGGCCATCGAGATCTGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | CCCGTGTCCACCGCGAAGCCATCGGCGCGGCCAGCCTaGCACACCTCGGGTGCTGTGTACGGTATAGTGCCG | + |
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Preference number: 6 (lower is better) Translates to: PVSTAKPSARPA*HTSGAVYGIVP Trigger: CGGCACTATACCGTACACAGCACCCGAGGTGTGCCAGGCTGGCCGCGCCGATGGCTTCGCGGTGGACACGGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | CGGAGCCAGACCAGCCTCAGGCACGGGTACTGGAACTaGCACTGGCACGGGTACCACGGGCCCTACGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: RSQTSLRHGYWN*HWHGYHGPYAG Trigger: CCCAGCGTAGGGCCCGTGGTACCCGTGCCAGTGCCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | TCACGCGCTTCACACGGCAGCCCACGCGCCGCGTCATaGCGAAGTCAGCCAGCTTCACACGGCGGCACTCAC | + |
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Preference number: 6 (lower is better) Translates to: SRASHGSPRAAS*RSQPASHGGTH Trigger: GTGAGTGCCGCCGTGTGAAGCTGGCTGACTTCGGCATGACGCGGCGCGTGGGCTGCCGTGTGAAGCGCGTGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | TGCAGGCGGAGCCAGACCAGCCTCAGGCACGGGTACTaGAACTGGCACTGGCACGGGTACCACGGGCCCTAC | + |
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Preference number: 6 (lower is better) Translates to: CRRSQTSLRHGY*NWHWHGYHGPY Trigger: GTAGGGCCCGTGGTACCCGTGCCAGTGCCAGTTCCAGTACCCGTGCCTGAGGCTGGTCTGGCTCCGCCTGCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 72 bp | GAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTGCTaGAGGAAGCGAAAGACCTCCTTGGCGGGCCCACGC | + |
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Preference number: 6 (lower is better) Translates to: EGRRRSSDVSSC*RKRKTSLAGPR Trigger: GCGTGGGCCCGCCAAGGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CAA 72 bp | TCGATGGCCGTGGCCAGTACCACCTGCCCTTTACTCTaGTCCGTGCGGCCGTCGGTCCTGCCCGGGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: SMAVASTTCPLL*SVRPSVLPGGA Trigger: TGCACCCCCGGGCAGGACCGACGGCCGCACGGACAAGAGTAAAGGGCAGGTGGTACTGGCCACGGCCATCGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 90 bp | CGCAGCTCGGATGTGAGCTCGTGCTTGAGGAAGCGAAAGACCTCCTaGGCGGGCCCACGCCGCTCAGGCTCTAGCGCCAGAAGCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: RSSDVSSCLRKRKTS*AGPRRSGSSARSRW Trigger: CCAGCGGCTTCTGGCGCTAGAGCCTGAGCGGCGTGGGCCCGCCAAGGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | CTGCTGTGCATGAAGTCCAGCGCCAGCCCCAGCTGCTaGACACAGCGCTTCACCGTGTCCTCTGGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: LLCMKSSASPSC*TQRFTVSSGSP Trigger: GGGGCTCCCAGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGGCTGGCGCTGGACTTCATGCACAGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | GAAGCCATCGGCGCGGCCAGCCTGGCACACCTCGGGTaGTGTGTACGGTATAGTGCCGCTCACGCGCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: EAIGAASLAHLG*CVRYSAAHALH Trigger: GTGAAGCGCGTGAGCGGCACTATACCGTACACAGCACCCGAGGTGTGCCAGGCTGGCCGCGCCGATGGCTTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | TGGGAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTaGTTGAGGAAGCGAAAGACCTCCTTGGCGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: WEGRRRSSDVSS*LRKRKTSLAGP Trigger: TGGGCCCGCCAAGGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTCCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS TCA 72 bp | CGCCACAGCATCATCCCCAGACAGGACGCGGTTCTCTaGGCCAGTGTGCTCCAGGGTCAGCAGCCTGTCGGC | + |
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Preference number: 6 (lower is better) Translates to: RHSIIPRQDAVL*ASVLQGQQPVG Trigger: GCCGACAGGCTGCTGACCCTGGAGCACACTGGCTCAGAGAACCGCGTCCTGTCTGGGGATGATGCTGTGGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS GCA 72 bp | TGCCTGCTGTGCATGAAGTCCAGCGCCAGCCCCAGCTaGTGCACACAGCGCTTCACCGTGTCCTCTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: CLLCMKSSASPS*CTQRFTVSSGS Trigger: GCTCCCAGAGGACACGGTGAAGCGCTGTGTGCAGCAGCTGGGGCTGGCGCTGGACTTCATGCACAGCAGGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | TCATCCCCAGACAGGACGCGGTTCTCTGAGCCAGTGTaGTCCAGGGTCAGCAGCCTGTCGGCCTCAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: SSPDRTRFSEPV*SRVSSLSASGP Trigger: GGGTCCTGAGGCCGACAGGCTGCTGACCCTGGAGCACACTGGCTCAGAGAACCGCGTCCTGTCTGGGGATGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS GCA 72 bp | CAGACGCAGATCTCGATGGCCGTGGCCAGTACCACCTaGCCTTTACTCTTGTCCGTGCGGCCGTCGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: QTQISMAVASTT*PLLLSVRPSVL Trigger: CAGGACCGACGGCCGCACGGACAAGAGTAAAGGGCAGGTGGTACTGGCCACGGCCATCGAGATCTGCGTCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 72 bp | GATGTGAGCTCGTGCTTGAGGAAGCGAAAGACCTCCTaGGCGGGCCCACGCCGCTCAGGCTCTAGCGCCAGA | + |
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Preference number: 6 (lower is better) Translates to: DVSSCLRKRKTS*AGPRRSGSSAR Trigger: TCTGGCGCTAGAGCCTGAGCGGCGTGGGCCCGCCAAGGAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | GCGCACGAACTCCTCGAAGAAGGCATCCGCACCCGATaGAGCCTCCCACGGGAAGTTGCCAGTGAGCACACA | + |
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Preference number: 6 (lower is better) Translates to: AHELLEEGIRTR*SLPREVASEHT Trigger: TGTGTGCTCACTGGCAACTTCCCGTGGGAGGCTGCATCGGGTGCGGATGCCTTCTTCGAGGAGTTCGTGCGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CCA 72 bp | CTCCTCCTCTCTGTGGAAGCAGACCAGGCAGAAGGCTaGCACATCATCAGCTGTACAGCCCAGGGGCCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LLLSVEADQAEG*HIISCTAQGPG Trigger: GCCTGGCCCCTGGGCTGTACAGCTGATGATGTGCCAGCCTTCTGCCTGGTCTGCTTCCACAGAGAGGAGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239081.2 |
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| CDS GCA 72 bp | ACATCGCTGGCAGCCAGTGTGCGTAGGGTCAGCGCTTaGATGTCTTCTGTGAGGAGGGGCACACCTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: TSLAASVRRVSA*MSSVRRGTPAP Trigger: AGGTGCAGGTGTGCCCCTCCTCACAGAAGACATGCAAGCGCTGACCCTACGCACACTGGCTGCCAGCGATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS GCA 72 bp | TGGGAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTaGTTGAGGAAGCGAAAGACCTTGATGATGAAGGGG | + |
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Preference number: 6 (lower is better) Translates to: WEGRRRSSDVSS*LRKRKTLMMKG Trigger: CCCCTTCATCATCAAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000206541.2 |
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| CDS CAA 72 bp | GAAGGCCGCCGCCGCAGCTCGGATGTGAGCTCGTGCTaGAGGAAGCGAAAGACCTTGATGATGAAGGGGCTA | + |
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Preference number: 6 (lower is better) Translates to: EGRRRSSDVSSC*RKRKTLMMKGL Trigger: TAGCCCCTTCATCATCAAGGTCTTTCGCTTCCTCAAGCACGAGCTCACATCCGAGCTGCGGCGGCGGCCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000206541.2 |
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| CDS GCA 72 bp | CTGAGGAGGGATGATGTCAAACAGGTCCCCAGCAGGTaGATACTCCTGGGCAAAGACATAGCACTCCTCGGT | + |
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Preference number: 6 (lower is better) Translates to: LRRDDVKQVPSR*ILLGKDIALLG Trigger: ACCGAGGAGTGCTATGTCTTTGCCCAGGAGTATGCACCTGCTGGGGACCTGTTTGACATCATCCCTCCTCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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| CDS CAA 72 bp | AAGACCTTGATGATGAAGGGGCTAGACGACAGGCTGTaGGTGATGCTCACCTCACGCAGAAAGTTCTTCAGC | + |
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Preference number: 6 (lower is better) Translates to: KTLMMKGLDDRL*VMLTSRRKFFS Trigger: GCTGAAGAACTTTCTGCGTGAGGTGAGCATCACCAACAGCCTGTCGTCTAGCCCCTTCATCATCAAGGTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056028.11 ENSMUST00000206541.2 ENSMUST00000239081.2 |
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| CDS CAA 90 bp | ACCACGTCAAAGACCTTGATGATGAAGGGGCTAGACGACAGGCTGTaGGTGATGCTCACCTCACGCAGAAAGTTCTTCAGCTTTGTCTTA | + |
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Preference number: 6 (lower is better) Translates to: TTSKTLMMKGLDDRL*VMLTSRRKFFSFVL Trigger: TAAGACAAAGCTGAAGAACTTTCTGCGTGAGGTGAGCATCACCAACAGCCTGTCGTCTAGCCCCTTCATCATCAAGGTCTTTGACGTGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000056028.11 ENSMUST00000239081.2 |
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