RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SAXO1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000028492

Ensembl transcript IDs: ENSMUST00000030216.6

Found 36 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS CCA 90 bp GGGAGGGACATACACAACGGGAGCTTTGGGGACCATCTGGGGTGTTaGCCAGGCTTGAAATTTCTCCTGAACCTCTGTGGTGTTGGTGAA +
Preference number: 5 (lower is better)
Translates to: GRDIHNGSFGDHLGC*PGLKFLLNLCGVGE
Trigger: TTCACCAACACCACAGAGGTTCAGGAGAAATTTCAAGCCTGGCCAACACCCCAGATGGTCCCCAAAGCTCCCGTTGTGTATGTCCCTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS GCA 90 bp AGGTGCAGAGTGGGTCTGATCGGCTTTGTGTTCACGGCTGCCCACTaGTTGAAGTCATCCTTGGTGGTGGTTGAGCTTTCAAAGCACTTG +
Preference number: 5 (lower is better)
Translates to: RCRVGLIGFVFTAAH*LKSSLVVVELSKHL
Trigger: CAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAAGCCGATCAGACCCACTCTGCACCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp CCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATTGGTGCAGATaGTTTCCGGTAGCACCACTCGGGCTTGAAGGAATTTCTGGGCAG +
Preference number: 5 (lower is better)
Translates to: PKISPACGQTFHWCR*FPVAPLGLEGISGQ
Trigger: CTGCCCAGAAATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp TCTTGGCAGGCTCCCCTAGCAGGCCTCGGTAGGACTCTTTGTGGGTaGTCAGGTTCTCAAAGGGGATGTCACAGGGTATATATTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SWQAPLAGLGRTLCG*SGSQRGCHRVYISL
Trigger: CAGAGAAATATATACCCTGTGACATCCCCTTTGAGAACCTGACCACCCACAAAGAGTCCTACCGAGGCCTGCTAGGGGAGCCTGCCAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp GAAGATCCATCTTCTCCTCGGGAGGGACATACACAACGGGAGCTTTaGGGACCATCTGGGGTGTTGGCCAGGCTTGAAATTTCTCCTGAA +
Preference number: 5 (lower is better)
Translates to: EDPSSPREGHTQREL*GPSGVLARLEISPE
Trigger: TTCAGGAGAAATTTCAAGCCTGGCCAACACCCCAGATGGTCCCCAAAGCTCCCGTTGTGTATGTCCCTCCCGAGGAGAAGATGGATCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 90 bp TGTGTTCACGGCTGCCCACTGCTTGAAGTCATCCTTGGTGGTGGTTaGGCTTTCAAAGCACTTGCTCTTCTTAATGGAAGGCACAGGTCG +
Preference number: 5 (lower is better)
Translates to: CVHGCPLLEVILGGG*AFKALALLNGRHRS
Trigger: CGACCTGTGCCTTCCATTAAGAAGAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS GCA 90 bp GTGAAGCCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATTGGTaGAGATGGTTTCCGGTAGCACCACTCGGGCTTGAAGGAATTTCT +
Preference number: 5 (lower is better)
Translates to: VKPKISPACGQTFHW*RWFPVAPLGLEGIS
Trigger: AGAAATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGGCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp GTAGTCATCCTGATGTGTGGTTCTGTTTTCAAACTTGGAAGACTCTaGCCGGTACTTGTGTGGAGGACGAAGAAGCTCCCGTCTTGGCTG +
Preference number: 5 (lower is better)
Translates to: VVILMCGSVFKLGRL*PVLVWRTKKLPSWL
Trigger: CAGCCAAGACGGGAGCTTCTTCGTCCTCCACACAAGTACCGGCCAGAGTCTTCCAAGTTTGAAAACAGAACCACACATCAGGATGACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp TTTGTGAAGCCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATTaGTGCAGATGGTTTCCGGTAGCACCACTCGGGCTTGAAGGAATT +
Preference number: 5 (lower is better)
Translates to: FVKPKISPACGQTFH*CRWFPVAPLGLEGI
Trigger: AATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGGCTTCACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 90 bp GACCTTCCATTGGTGCAGATGGTTTCCGGTAGCACCACTCGGGCTTaGAGGAATTTCTGGGCAGGTAAGACTGATAGATCGGATAATTCT +
Preference number: 5 (lower is better)
Translates to: DLPLVQMVSGSTTRA*RNFWAGKTDRSDNS
Trigger: AGAATTATCCGATCTATCAGTCTTACCTGCCCAGAAATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp CTTTCATGGTGTAGTCATCCTGATGTGTGGTTCTGTTTTCAAACTTaGAAGACTCTGGCCGGTACTTGTGTGGAGGACGAAGAAGCTCCC +
Preference number: 5 (lower is better)
Translates to: LSWCSHPDVWFCFQT*KTLAGTCVEDEEAP
Trigger: GGGAGCTTCTTCGTCCTCCACACAAGTACCGGCCAGAGTCTTCCAAGTTTGAAAACAGAACCACACATCAGGATGACTACACCATGAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 90 bp GGAACATATGTGTCAGGCTGGTGGAATGTCACCGGTAACATTTTGTaGAGCCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATTGGT +
Preference number: 5 (lower is better)
Translates to: GTYVSGWWNVTGNIL*SPKSLLHVVRPSIG
Trigger: ACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGGCTTCACAAAATGTTACCGGTGACATTCCACCAGCCTGACACATATGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 90 bp CATCTTGTAGTTAGTCAGGTCTTCCAAGGGGATGTTGTAGATTTTTaGCTTGGATGGAGGCTTACAGCTCACAGTAGTCACAAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: HLVVSQVFQGDVVDF*LGWRLTAHSSHKAF
Trigger: AAAGGCCTTGTGACTACTGTGAGCTGTAAGCCTCCATCCAAGTCAAAAATCTACAACATCCCCTTGGAAGACCTGACTAACTACAAGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 90 bp GTCACCATTTGGAAATTTACTGTCCCGAGGTTTGATGAGGCCAACTaGACAGGTAGGGAGGTAGTTAAAATCGTGTTTATACGTTGTGAG +
Preference number: 5 (lower is better)
Translates to: VTIWKFTVPRFDEAN*TGREVVKIVFIRCE
Trigger: CTCACAACGTATAAACACGATTTTAACTACCTCCCTACCTGTCCAGTTGGCCTCATCAAACCTCGGGACAGTAAATTTCCAAATGGTGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp GCTCCCCTAGCAGGCCTCGGTAGGACTCTTTGTGGGTaGTCAGGTTCTCAAAGGGGATGTCACAGGGTATAT +
Preference number: 6 (lower is better)
Translates to: APLAGLGRTLCG*SGSQRGCHRVY
Trigger: ATATACCCTGTGACATCCCCTTTGAGAACCTGACCACCCACAAAGAGTCCTACCGAGGCCTGCTAGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp TCTTCTCCTCGGGAGGGACATACACAACGGGAGCTTTaGGGACCATCTGGGGTGTTGGCCAGGCTTGAAATT +
Preference number: 6 (lower is better)
Translates to: SSPREGHTQREL*GPSGVLARLEI
Trigger: AATTTCAAGCCTGGCCAACACCCCAGATGGTCCCCAAAGCTCCCGTTGTGTATGTCCCTCCCGAGGAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 72 bp GCCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATaGGTGCAGATGGTTTCCGGTAGCACCACTCGGGCT +
Preference number: 6 (lower is better)
Translates to: AQNLSCMWSDLP*VQMVSGSTTRA
Trigger: AGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS GCA 72 bp GTGGGTCTGATCGGCTTTGTGTTCACGGCTGCCCACTaGTTGAAGTCATCCTTGGTGGTGGTTGAGCTTTCA +
Preference number: 6 (lower is better)
Translates to: VGLIGFVFTAAH*LKSSLVVVELS
Trigger: TGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAAGCCGATCAGACCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp CCCAAAATCTCTCCTGCATGTGGTCAGACCTTCCATTaGTGCAGATGGTTTCCGGTAGCACCACTCGGGCTT +
Preference number: 6 (lower is better)
Translates to: PKISPACGQTFH*CRWFPVAPLGL
Trigger: AAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 90 bp TGCAGAGTGGGTCTGATCGGCTTTGTGTTCACGGCTGCCCACTGCTaGAAGTCATCCTTGGTGGTGGTTGAGCTTTCAAAGCACTTGCTC +
Preference number: 6 (lower is better)
Translates to: CRVGLIGFVFTAAHC*KSSLVVVELSKHLL
Trigger: GAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAAGCCGATCAGACCCACTCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 72 bp AGGCTTGAAATTTCTCCTGAACCTCTGTGGTGTTGGTaGAAGGTGCATCGTGCACGGGGAACTTGGCTGGAG +
Preference number: 6 (lower is better)
Translates to: RLEISPEPLWCW*KVHRARGTWLE
Trigger: CTCCAGCCAAGTTCCCCGTGCACGATGCACCTTTCACCAACACCACAGAGGTTCAGGAGAAATTTCAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp TCTCCTGCATGTGGTCAGACCTTCCATTGGTGCAGATaGTTTCCGGTAGCACCACTCGGGCTTGAAGGAATT +
Preference number: 6 (lower is better)
Translates to: SPACGQTFHWCR*FPVAPLGLEGI
Trigger: AATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp GTTTTCAAACTTGGAAGACTCTGGCCGGTACTTGTGTaGAGGACGAAGAAGCTCCCGTCTTGGCTGGTTCCA +
Preference number: 6 (lower is better)
Translates to: VFKLGRLWPVLV*RTKKLPSWLVP
Trigger: TGGAACCAGCCAAGACGGGAGCTTCTTCGTCCTCCACACAAGTACCGGCCAGAGTCTTCCAAGTTTGAAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 72 bp GGTCTGATCGGCTTTGTGTTCACGGCTGCCCACTGCTaGAAGTCATCCTTGGTGGTGGTTGAGCTTTCAAAG +
Preference number: 6 (lower is better)
Translates to: GLIGFVFTAAHC*KSSLVVVELSK
Trigger: CTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAAGCCGATCAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 90 bp ATACACAACGGGAGCTTTGGGGACCATCTGGGGTGTTGGCCAGGCTaGAAATTTCTCCTGAACCTCTGTGGTGTTGGTGAAAGGTGCATC +
Preference number: 6 (lower is better)
Translates to: IHNGSFGDHLGCWPG*KFLLNLCGVGERCI
Trigger: GATGCACCTTTCACCAACACCACAGAGGTTCAGGAGAAATTTCAAGCCTGGCCAACACCCCAGATGGTCCCCAAAGCTCCCGTTGTGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 72 bp TTGGTGCAGATGGTTTCCGGTAGCACCACTCGGGCTTaGAGGAATTTCTGGGCAGGTAAGACTGATAGATCG +
Preference number: 6 (lower is better)
Translates to: LVQMVSGSTTRA*RNFWAGKTDRS
Trigger: CGATCTATCAGTCTTACCTGCCCAGAAATTCCTTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS GCA 72 bp AAAATCTCTCCTGCATGTGGTCAGACCTTCCATTGGTaGAGATGGTTTCCGGTAGCACCACTCGGGCTTGAA +
Preference number: 6 (lower is better)
Translates to: KISPACGQTFHW*RWFPVAPLGLE
Trigger: TTCAAGCCCGAGTGGTGCTACCGGAAACCATCTGCACCAATGGAAGGTCTGACCACATGCAGGAGAGATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 72 bp GTGTCAGGCTGGTGGAATGTCACCGGTAACATTTTGTaGAGCCCAAAATCTCTCCTGCATGTGGTCAGACCT +
Preference number: 6 (lower is better)
Translates to: VSGWWNVTGNIL*SPKSLLHVVRP
Trigger: AGGTCTGACCACATGCAGGAGAGATTTTGGGCTTCACAAAATGTTACCGGTGACATTCCACCAGCCTGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 72 bp GGCTGCCCACTGCTTGAAGTCATCCTTGGTGGTGGTTaGGCTTTCAAAGCACTTGCTCTTCTTAATGGAAGG +
Preference number: 6 (lower is better)
Translates to: GCPLLEVILGGG*AFKALALLNGR
Trigger: CCTTCCATTAAGAAGAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS GCA 72 bp AAATTTCTCCTGAACCTCTGTGGTGTTGGTGAAAGGTaGATCGTGCACGGGGAACTTGGCTGGAGGTTTTGT +
Preference number: 6 (lower is better)
Translates to: KFLLNLCGVGER*IVHGELGWRFC
Trigger: ACAAAACCTCCAGCCAAGTTCCCCGTGCACGATGCACCTTTCACCAACACCACAGAGGTTCAGGAGAAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp TTTCTCTGTTTTATCATAAATCTTCGTAGGGAGATGTaGACAGCGATGCCGCCCGCAGGAGCACAGGTTGCA +
Preference number: 6 (lower is better)
Translates to: FLCFIINLRREM*TAMPPAGAQVA
Trigger: TGCAACCTGTGCTCCTGCGGGCGGCATCGCTGTCCACATCTCCCTACGAAGATTTATGATAAAACAGAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 72 bp TTTGTGTTCACGGCTGCCCACTGCTTGAAGTCATCCTaGGTGGTGGTTGAGCTTTCAAAGCACTTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: FVFTAAHCLKSS*VVVELSKHLLF
Trigger: GAAGAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 90 bp CACTGCTTGAAGTCATCCTTGGTGGTGGTTGAGCTTTCAAAGCACTaGCTCTTCTTAATGGAAGGCACAGGTCGGCAAGTTATAGCAGGG +
Preference number: 6 (lower is better)
Translates to: HCLKSSLVVVELSKH*LFLMEGTGRQVIAG
Trigger: CCCTGCTATAACTTGCCGACCTGTGCCTTCCATTAAGAAGAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CAA 90 bp CTGATCGGCTTTGTGTTCACGGCTGCCCACTGCTTGAAGTCATCCTaGGTGGTGGTTGAGCTTTCAAAGCACTTGCTCTTCTTAATGGAA +
Preference number: 6 (lower is better)
Translates to: LIGFVFTAAHCLKSS*VVVELSKHLLFLME
Trigger: TTCCATTAAGAAGAGCAAGTGCTTTGAAAGCTCAACCACCACCAAGGATGACTTCAAGCAGTGGGCAGCCGTGAACACAAAGCCGATCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS CCA 72 bp TCACAAGGCCTTTCATGGTGTAGTCATCCTGATGTGTaGTTCTGTTTTCAAACTTGGAAGACTCTGGCCGGT +
Preference number: 6 (lower is better)
Translates to: SQGLSWCSHPDV*FCFQTWKTLAG
Trigger: ACCGGCCAGAGTCTTCCAAGTTTGAAAACAGAACCACACATCAGGATGACTACACCATGAAAGGCCTTGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6
CDS TCA 72 bp GTTAGTCAGGTCTTCCAAGGGGATGTTGTAGATTTTTaGCTTGGATGGAGGCTTACAGCTCACAGTAGTCAC +
Preference number: 6 (lower is better)
Translates to: VSQVFQGDVVDF*LGWRLTAHSSH
Trigger: GTGACTACTGTGAGCTGTAAGCCTCCATCCAAGTCAAAAATCTACAACATCCCCTTGGAAGACCTGACTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000030216.6