RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SATB1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000023927

Ensembl transcript IDs: ENSMUST00000124222.2, ENSMUST00000129205.8, ENSMUST00000129667.8, ENSMUST00000133574.8, ENSMUST00000140979.8, ENSMUST00000144331.8, ENSMUST00000152830.9, ENSMUST00000169480.8, ENSMUST00000176669.8

Found 718 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTaGGGAAATGCTCCCCCGGAAGACAGTAGCTACAGAGCCTGGCTC +
Preference number: 1 (lower is better)
Translates to: PPGKPCSHQNGAAQA*GNAPPEDSSYRAWL
Trigger: GAGCCAGGCTCTGTAGCTACTGTCTTCCGGGGGAGCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 90 bp ACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCATaGTGCAGCAGTTTAGACTTGGAGTCCAGGGCTCTGCCTCCTACT +
Preference number: 1 (lower is better)
Translates to: TKVSLEPATAHQPGP*CSSLDLESRALPPT
Trigger: AGTAGGAGGCAGAGCCCTGGACTCCAAGTCTAAACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 90 bp TATCACCAAGAAAGCGTGAGCATGCACCTACATGACAGCCGTCCTTaGGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCA +
Preference number: 1 (lower is better)
Translates to: YHQESVSMHLHDSRP*AWLKLLHISRQTLP
Trigger: TGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGACGGCTGTCATGTAGGTGCATGCTCACGCTTTCTTGGTGATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 90 bp AAAGGGATACAAAAGACAGAAAAACACAGCCTACGAAAGTTTCTCTaGAGCCAGCCACAGCACACCAGCCTGGGCCATGATGCAGCAGTT +
Preference number: 1 (lower is better)
Translates to: KGIQKTEKHSLRKFL*SQPQHTSLGHDAAV
Trigger: AACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTTTTTCTGTCTTTTGTATCCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 90 bp AGTTTAGACTTGGAGTCCAGGGCTCTGCCTCCTACTATCTTCATGTaGTTCTCAGTTTTGACAAAGGCAGTCCATGTTCACCTTGCCTAC +
Preference number: 1 (lower is better)
Translates to: SLDLESRALPPTIFM*FSVLTKAVHVHLAY
Trigger: GTAGGCAAGGTGAACATGGACTGCCTTTGTCAAAACTGAGAACCACATGAAGATAGTAGGAGGCAGAGCCCTGGACTCCAAGTCTAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 90 bp ATTAGTGGCAAAGTGCTGAGTGTAGGATGCTATGACAGACTCAGATaGACACAACTGACTACTACCCGGAAATTACCTGACTCTGCTAAG +
Preference number: 1 (lower is better)
Translates to: ISGKVLSVGCYDRLR*TQLTTTRKLPDSAK
Trigger: CTTAGCAGAGTCAGGTAATTTCCGGGTAGTAGTCAGTTGTGTGCATCTGAGTCTGTCATAGCATCCTACACTCAGCACTTTGCCACTAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 90 bp AAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTaGGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACG +
Preference number: 1 (lower is better)
Translates to: KGKPISGIMLTGYNT*VQPLNTNSTKQSLT
Trigger: CGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR GCA 90 bp AAGTTTGCATTGTTTTCTCTCTCACTTAAGAATCAGAAATTAGTTTaGAGCAGAACAGCAGCCTTCCAAGGTGCTCAGCTGTGCTTCGAA +
Preference number: 1 (lower is better)
Translates to: KFALFSLSLKNQKLV*SRTAAFQGAQLCFE
Trigger: TTCGAAGCACAGCTGAGCACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAGAGAAAACAATGCAAACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 90 bp CGAAGATTCATTGGCCAAACAATAAACAATGAAGGTTTGTCTGAGTaGACACAAGGTGGACTTCTCATGTTGTTAGGAAATACCGGTGGT +
Preference number: 1 (lower is better)
Translates to: RRFIGQTINNEGLSE*TQGGLLMLLGNTGG
Trigger: ACCACCGGTATTTCCTAACAACATGAGAAGTCCACCTTGTGTTCACTCAGACAAACCTTCATTGTTTATTGTTTGGCCAATGAATCTTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR TCA 90 bp TTTATTGAAAATACTGTGACAATCAAGGACCTTGTTAGCCAAATGTaGACAACTGGGACCAGGGAAGAATTTAATAATAGCAGGTGTGGG +
Preference number: 1 (lower is better)
Translates to: FIENTVTIKDLVSQM*TTGTREEFNNSRCG
Trigger: CCCACACCTGCTATTATTAAATTCTTCCCTGGTCCCAGTTGTTCACATTTGGCTAACAAGGTCCTTGATTGTCACAGTATTTTCAATAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 90 bp CAGTCAATACGCATTTTATACATATGTACAGACTTTGTTACTAAGTaGCACACAGGTAGGGCACACATACTAGTCACCTTTGTTTTCAAA +
Preference number: 1 (lower is better)
Translates to: QSIRILYICTDFVTK*HTGRAHILVTFVFK
Trigger: TTTGAAAACAAAGGTGACTAGTATGTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGCGTATTGACTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 90 bp AGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATaGCCATCTCAAGTACTTAACTGCTACAGTAATATTTCTGCTGGA +
Preference number: 1 (lower is better)
Translates to: RKYCPNWRIVQKKQI*PSQVLNCYSNISAG
Trigger: TCCAGCAGAAATATTACTGTAGCAGTTAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 90 bp CCATGGCTATATAGCACAGGCCATACACATTTTAGTTGCTCTTGCTaGAAATATCACCAGGCAGTTCATAATAGCTCATTTATTGAAAAT +
Preference number: 1 (lower is better)
Translates to: PWLYSTGHTHFSCSC*KYHQAVHNSSFIEN
Trigger: ATTTTCAATAAATGAGCTATTATGAACTGCCTGGTGATATTTTCAGCAAGAGCAACTAAAATGTGTATGGCCTGTGCTATATAGCCATGG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 90 bp TACTTAACTGCTACAGTAATATTTCTGCTGGAGTCTTTGACTGTCTaGTGTAATAAGCAAAAGCAGATTATCATCTGCATTGTGGAATTC +
Preference number: 1 (lower is better)
Translates to: YLTATVIFLLESLTV*CNKQKQIIICIVEF
Trigger: GAATTCCACAATGCAGATGATAATCTGCTTTTGCTTATTACACCAGACAGTCAAAGACTCCAGCAGAAATATTACTGTAGCAGTTAAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGAACACAGTAAAACCTTaGGTGCTGGCTGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: GAALEHKFYQTVLDASPGNTVKP*VLAVLS
Trigger: GGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTT...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CAA 90 bp ATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCAGCCCTaGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGG +
Preference number: 2 (lower is better)
Translates to: ISGIMLTGYNTWVQP*NTNSTKQSLTLHPG
Trigger: CCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAACACAGTAAAACCTTaGGTGCTGGCTGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSNTVKP*VLAVLS
Trigger: GGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTT...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR TCA 90 bp CCCCGGAAGACAGTAGCTACAGAGCCTGGCTCCACAAACCTAAATATCCCCATCTGTGGTTCTCAGTTTTaGCAAAGGCAGTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: PRKTVATEPGSTNLNIPICGSQF*QRQSMF
Trigger: GAACATGGACTGCCTTTGTCAAAACTGAGAACCACA...GATGGGGATATTTAGGTTTGTGGAGCCAGGCTCTGTAGCTACTGTCTTCCGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGCCACCAGAATGGAGCTaGCCAGGCCTGAGGAAATGC +
Preference number: 2 (lower is better)
Translates to: IWEKEATDDNLWLAACYLPPEWS*PGLRKC
Trigger: GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGG...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAACAGGGTACAACACCTaGGTGCAGCCCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSTGYNT*VQPLNT
Trigger: TGTGTTCAAGGGCTGCACCCAGGTGTTGTACCCTGT...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCGCTTCTAGAGTGAATTaGTTGGATAACATAGACTTT +
Preference number: 2 (lower is better)
Translates to: NTAYESFSGASHSTPAWAASRVN*LDNIDF
Trigger: AAAGTCTATGTTATCCAAGCAATTCACTCTAGAAGC...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTAACACAGTAAAACCTTaGGTGCTGGCTGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSNTVKP*VLAVLS
Trigger: GGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTT...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATCACCTTGCCTACCTATaGCTTGTAAAACAAATCACC +
Preference number: 2 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNHLAYL*LVKQIT
Trigger: GGTGATTTGTTTTACAAGTCATAGGTAGGCAAGGTG...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCGAAAGGAAATCAGGATaGGAAAGCAACATTACATTT +
Preference number: 2 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSERKSG*ESNITF
Trigger: AAATGTAATGTTGCTTTCCCATCCTGATTTCCTTTC...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAACACAGCACACCAGCCTaGGCCATGATGCAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQHSTPA*AMMQQF
Trigger: AAACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTG...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTTCTGGTATCATGCTaGCAGGGTACAACACCTGGG +
Preference number: 2 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRFLVSC*QGTTPG
Trigger: CCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR TCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACCACCAGCCTGGGCCATaGTGCAGCAGTTTAGACTTG +
Preference number: 2 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHHQPGP*CSSLDL
Trigger: CAAGTCTAAACTGCTGCATCATGGCCCAGGCTGGTG...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp GACTCTGCTAAGGTTCTAACAGCACAAAGCACTATGTCATGCCCAGCCGAAACGAATCAGAAATTAGTTTaGAGCAGAACAGCAGCCTTC +
Preference number: 2 (lower is better)
Translates to: DSAKVLTAQSTMSCPAETNQKLV*SRTAAF
Trigger: GAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATT...CGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTGTTAGAACCTTAGCAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTGTGGTTCTCAGTTTTaGCAAAGGCAGTCCATGTTC +
Preference number: 2 (lower is better)
Translates to: IWEKEATDDNLWLAACYLCGSQF*QRQSMF
Trigger: GAACATGGACTGCCTTTGTCAAAACTGAGAACCACA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACACAGGGTACAACACCTaGGTGCAGCCCTTGAACACA +
Preference number: 2 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNTGYNT*VQPLNT
Trigger: TGTGTTCAAGGGCTGCACCCAGGTGTTGTACCCTGT...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACAACACAGTAAAACCTTaGGTGCTGGCTGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNNTVKP*VLAVLS
Trigger: GGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTT...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGAGCATATGTGTAGCTTaGATTGAGTATCTCAGGGAG +
Preference number: 2 (lower is better)
Translates to: IWEKEATDDNLWLAACYLSICVA*IEYLRE
Trigger: CTCCCTGAGATACTCAATTCAAGCTACACATATGCT...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACGTGCTGAGTGTAGGATaGTATGACAGACTCAGATGC +
Preference number: 2 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHVLSVG*YDRLRC
Trigger: GCATCTGAGTCTGTCATAGCATCCTACACTCAGCAC...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTCACAGCACACCAGCCTaGGCCATGATGCAGCAGTTT +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFHSTPA*AMMQQF
Trigger: AAACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTG...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACGAGCTGGGGACAATGTaGATCACTAGGGGAAATCTT +
Preference number: 2 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHELGTM*ITRGNL
Trigger: AAGATTTCCCCTAGTGATCCACATTGTCCCCAGCTC...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGCCTACTATCTTCATGTaGTTCTCAGTTTTGACAAAG +
Preference number: 2 (lower is better)
Translates to: IWEKEATDDNLWLAACYLPTIFM*FSVLTK
Trigger: CTTTGTCAAAACTGAGAACCACATGAAGATAGTAGG...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR TCA 90 bp CTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTAAATGTACCCTAGCTTaGAGAAAATATTGCCCTAAC +
Preference number: 2 (lower is better)
Translates to: LSLKNQKLVCSRTAAFQGKCTLA*RKYCPN
Trigger: GTTAGGGCAATATTTTCTTCAAGCTAGGGTACATTT...ACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGGCTTCTAGAGTGAATTaGTTGGATAACATAGACTTT +
Preference number: 2 (lower is better)
Translates to: IWEKEATDDNLWLAACYLASRVN*LDNIDF
Trigger: AAAGTCTATGTTATCCAAGCAATTCACTCTAGAAGC...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTGACTTTGTTACTAAGTaGCACACAGGTAGGGCACAC +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFDFVTK*HTGRAH
Trigger: GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTC...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAAGAGTCTTTGACTGTCTaGTGTAATAAGCAAAAGCAG +
Preference number: 2 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQESLTV*CNKQKQ
Trigger: CTGCTTTTGCTTATTACACCAGACAGTCAAAGACTC...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTGTGACCATCGTGGCTTaGAAACATGTGCTTTATTCT +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFVTIVA*KHVLYS
Trigger: AGAATAAAGCACATGTTTGCAAGCCACGATGGTCAC...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCAACTCTGCATATTGTGTaGCAAGAAGATACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPTLHIV*QEDTVN
Trigger: GTTGACAGTATCTTCTTGCCACACAATATGCAGAGT...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CAA 90 bp CATCTCAAGTACTTAACTGCTACAGTAATATTTCTGCTGGAGTCTTaGACTGTCTGGTGTAATAAGCAAAAGCAGATTATCATCTGCATT +
Preference number: 2 (lower is better)
Translates to: HLKYLTATVIFLLES*TVWCNKQKQIIICI
Trigger: AATGCAGATGATAATCTGCTTTTGCTTATTACACCAGACAGTCAAAGACTCCAGCAGAAATATTACTGTAGCAGTTAAGTACTTGAGATG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACCATGATAGTAAAAATTaGATACAACAACGAGACCGA +
Preference number: 2 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHHDSKN*IQQRDR
Trigger: TCGGTCTCGTTGTTGTATGCAATTTTTACTATCATG...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACGAAAGGAAATCAGGATaGGAAAGCAACATTACATTT +
Preference number: 2 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHERKSG*ESNITF
Trigger: AAATGTAATGTTGCTTTCCCATCCTGATTTCCTTTC...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCACCTACTATCTTCATGTaGTTCTCAGTTTTGACAAAG +
Preference number: 2 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPPTIFM*FSVLTK
Trigger: CTTTGTCAAAACTGAGAACCACATGAAGATAGTAGG...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTACTCTGCATATTGTGTaGCAAGAAGATACTGTCAAC +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFTLHIV*QEDTVN
Trigger: GTTGACAGTATCTTCTTGCCACACAATATGCAGAGT...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CAA 90 bp TCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAAAGTTTGCATaGTTTTCTCTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGA +
Preference number: 2 (lower is better)
Translates to: SSNYFAQLQRTRKFA*FSLSLKNQKLVCSR
Trigger: TCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAGAGAAAACAATGCAAACTTTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTACAGATGATAATCTGTaGTTAGCAGCATGTTACTTG +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFTDDNL*LAACYL
Trigger: CAAGTAACATGCTGCTAACCACAGATTATCATCTGT...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR GCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTAAGCAGATTATCATCTaGATTGTGGAATTCCATAAC +
Preference number: 2 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFKQIII*IVEFHN
Trigger: GTTATGGAATTCCACAATGCAGATGATAATCTGCTT...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp TCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCATaGTGCAGCAGTTTAGACTTGGAGTCCAGGGCTCTG +
Preference number: 3 (lower is better)
Translates to: SLEPATAHQPGP*CSSLDLESRAL
Trigger: CAGAGCCCTGGACTCCAAGTCTAAACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 72 bp GAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTaGGCCATGATGCAGCAGTTTAGACTTGGAGTCCAG +
Preference number: 3 (lower is better)
Translates to: ESFSGASHSTPA*AMMQQFRLGVQ
Trigger: CTGGACTCCAAGTCTAAACTGCTGCATCATGGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp ACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTGAGGAAATGCATGTGGTTCTCAGTTTaGACAAAGGCAGTCCATGTT +
Preference number: 3 (lower is better)
Translates to: TRKALQPPEWSCPGLRKCMWFSV*TKAVHV
Trigger: AACATGGACTGCCTTTGTCAAAACTGAGAACCACAT...GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATGGCCCATGCGTTCCCTaGTTCATGCTGCTATTGATG +
Preference number: 3 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNGPCVP*FMLLLM
Trigger: CATCAATAGCAGCATGAACAAGGGAACGCATGGGCC...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGTGGACTTCTCATGTaGTTAGGAAATACCGGTGGT +
Preference number: 3 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGGLLM*LGNTGG
Trigger: ACCACCGGTATTTCCTAACAACATGAGAAGTCCACC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CCA 72 bp CAAAAGACAGAAAAACACAGCCTACGAAAGTTTCTCTaGAGCCAGCCACAGCACACCAGCCTGGGCCATGAT +
Preference number: 3 (lower is better)
Translates to: QKTEKHSLRKFL*SQPQHTSLGHD
Trigger: ATCATGGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTTTTTCTGTCTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTCTACCAAACAGTCCTaGACGCTTCACCCGGGGCTG +
Preference number: 3 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVSTKQS*TLHPGL
Trigger: CAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR CAA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATACCTGGGTGCAGCCCTaGAACACAAATTCTACCAAA +
Preference number: 3 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNTWVQP*NTNSTK
Trigger: TTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGT...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp GAAAGCGTGAGCATGCACCTACATGACAGCCGTCCTTaGGCCTGGCTCAAGTTACTTCACATAAGCAGACAA +
Preference number: 3 (lower is better)
Translates to: ESVSMHLHDSRP*AWLKLLHISRQ
Trigger: TTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGACGGCTGTCATGTAGGTGCATGCTCACGCTTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 72 bp CTGTTTCCTGCAAAGGATTCTCGCACGGAAGGCCCATaGGTTCCCTTGTTCATGCTGCTATTGATGGCTTTT +
Preference number: 3 (lower is better)
Translates to: LFPAKDSRTEGP*VPLFMLLLMAF
Trigger: AAAAGCCATCAATAGCAGCATGAACAAGGGAACGCATGGGCCTTCCGTGCGAGAATCCTTTGCAGGAAACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp GACTCTGCTAAGGTTCTAACAGCACAAAGCACTATGTCATGCCCAGCCGAAACGGCTGGCACAATGGTGTaGCTTTCCAACACACTCATT +
Preference number: 3 (lower is better)
Translates to: DSAKVLTAQSTMSCPAETAGTMV*LSNTLI
Trigger: AATGAGTGTGTTGGAAAGCAACACCATTGTGCCAGC...CGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTGTTAGAACCTTAGCAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 72 bp GAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTaGTCAGCTGTGCTTCGAAGTAAATCCCTCAGTGGA +
Preference number: 3 (lower is better)
Translates to: EISLQQNSSLPR*SAVLRSKSLSG
Trigger: TCCACTGAGGGATTTACTTCGAAGCACAGCTGAGCACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 72 bp TCTGCTAAGGTTCTAACAGCACAAAGCACTATGTCATaGCCAGCCGAAACGCTGGGACACAATGAAGCTTGT +
Preference number: 3 (lower is better)
Translates to: SAKVLTAQSTMS*PAETLGHNEAC
Trigger: ACAAGCTTCATTGTGTCCCAGCGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTGTTAGAACCTTAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 72 bp TTGGAGTCCAGGGCTCTGCCTCCTACTATCTTCATGTaGTTCTCAGTTTTGACAAAGGCAGTCCATGTTCAC +
Preference number: 3 (lower is better)
Translates to: LESRALPPTIFM*FSVLTKAVHVH
Trigger: GTGAACATGGACTGCCTTTGTCAAAACTGAGAACCACATGAAGATAGTAGGAGGCAGAGCCCTGGACTCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTGGTGGACTTCTCATGTaGTTAGGAAATACCGGTGGT +
Preference number: 3 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSGGLLM*LGNTGG
Trigger: ACCACCGGTATTTCCTAACAACATGAGAAGTCCACC...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 72 bp CCAATTTCTGGTATCATGCTGACAGGGTACAACACCTaGGTGCAGCCCTTGAACACAAATTCTACCAAACAG +
Preference number: 3 (lower is better)
Translates to: PISGIMLTGYNT*VQPLNTNSTKQ
Trigger: CTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CCA 72 bp TTTCTGGCTGGCTTTAGCACAGTCCCATCTCCTCCATaGCTATATAGCACAGGCCATACACATTTTAGTTGC +
Preference number: 3 (lower is better)
Translates to: FLAGFSTVPSPP*LYSTGHTHFSC
Trigger: GCAACTAAAATGTGTATGGCCTGTGCTATATAGCCATGGAGGAGATGGGACTGTGCTAAAGCCAGCCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGACCTGGGTGCAGCCCTaGAACACAAATTCTACCAAA +
Preference number: 3 (lower is better)
Translates to: IWEKEATDDNLWLAACYLTWVQP*NTNSTK
Trigger: TTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGT...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 72 bp AAAGTGCTGAGTGTAGGATGCTATGACAGACTCAGATaGACACAACTGACTACTACCCGGAAATTACCTGAC +
Preference number: 3 (lower is better)
Translates to: KVLSVGCYDRLR*TQLTTTRKLPD
Trigger: GTCAGGTAATTTCCGGGTAGTAGTCAGTTGTGTGCATCTGAGTCTGTCATAGCATCCTACACTCAGCACTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 72 bp CAGCACAAAGCACTATGTCATGCCCAGCCGAAACGCTaGGACACAATGAAGCTTGTTAAAGGAATTTTACCA +
Preference number: 3 (lower is better)
Translates to: QHKALCHAQPKR*DTMKLVKGILP
Trigger: TGGTAAAATTCCTTTAACAAGCTTCATTGTGTCCCAGCGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGTGGACTTCTCATGTaGTTAGGAAATACCGGTGGT +
Preference number: 3 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGGGLLM*LGNTGG
Trigger: ACCACCGGTATTTCCTAACAACATGAGAAGTCCACC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGACCTGGGTGCAGCCCTaGAACACAAATTCTACCAAA +
Preference number: 3 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRTWVQP*NTNSTK
Trigger: TTTGGTAGAATTTGTGTTCAAGGGCTGCACCCAGGT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR CAA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTGCCCTAACTGGAGGATaGTACAGAAAAAGCAGATAT +
Preference number: 3 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSALTGG*YRKSRY
Trigger: ATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp TTGACAAAGGCAGTCCATGTTCACCTTGCCTACCTATaGCTTGTAAAACAAATCACCAGCAAACAAGCCCCT +
Preference number: 3 (lower is better)
Translates to: LTKAVHVHLAYL*LVKQITSKQAP
Trigger: AGGGGCTTGTTTGCTGGTGATTTGTTTTACAAGTCATAGGTAGGCAAGGTGAACATGGACTGCCTTTGTCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGGTGGACTTCTCATGTaGTTAGGAAATACCGGTGGT +
Preference number: 3 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIGGLLM*LGNTGG
Trigger: ACCACCGGTATTTCCTAACAACATGAGAAGTCCACC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR-3UTR CAA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTTGCAGCAGTTTAGACTaGGAGTCCAGGGCTCTGCCT +
Preference number: 3 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFCSSLD*ESRALP
Trigger: AGGCAGAGCCCTGGACTCCAAGTCTAAACTGCTGCA...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTGGCCCATGCGTTCCCTaGTTCATGCTGCTATTGATG +
Preference number: 3 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFGPCVP*FMLLLM
Trigger: CATCAATAGCAGCATGAACAAGGGAACGCATGGGCC...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACAGCGAACAAGAAAGTTaGCATTGTTTTCTCTCTCAC +
Preference number: 3 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHSEQES*HCFLSH
Trigger: GTGAGAGAGAAAACAATGCAAACTTTCTTGTTCGCT...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR GCA 72 bp CGCATTTTATACATATGTACAGACTTTGTTACTAAGTaGCACACAGGTAGGGCACACATACTAGTCACCTTT +
Preference number: 3 (lower is better)
Translates to: RILYICTDFVTK*HTGRAHILVTF
Trigger: AAAGGTGACTAGTATGTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp AATACTGTGACAATCAAGGACCTTGTTAGCCAAATGTaGACAACTGGGACCAGGGAAGAATTTAATAATAGC +
Preference number: 3 (lower is better)
Translates to: NTVTIKDLVSQM*TTGTREEFNNS
Trigger: GCTATTATTAAATTCTTCCCTGGTCCCAGTTGTTCACATTTGGCTAACAAGGTCCTTGATTGTCACAGTATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp GCAAGTATTCACTATTTACATTTAAAGGATTGCTTCTaGGGGAACACTGAATCCAAGAATAGGCCCTTGAGA +
Preference number: 3 (lower is better)
Translates to: ASIHYLHLKDCF*GNTESKNRPLR
Trigger: TCTCAAGGGCCTATTCTTGGATTCAGTGTTCCCTCAGAAGCAATCCTTTAAATGTAAATAGTGAATACTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CCA 72 bp TGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATaGCCATCTCAAGTACTTAACTGCTACAGTAATATT +
Preference number: 3 (lower is better)
Translates to: CPNWRIVQKKQI*PSQVLNCYSNI
Trigger: AATATTACTGTAGCAGTTAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR-3UTR CAA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTATGTGGTTCTCAGTTTaGACAAAGGCAGTCCATGTT +
Preference number: 3 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFMWFSV*TKAVHV
Trigger: AACATGGACTGCCTTTGTCAAAACTGAGAACCACAT...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR TCA 72 bp ATTGGCCAAACAATAAACAATGAAGGTTTGTCTGAGTaGACACAAGGTGGACTTCTCATGTTGTTAGGAAAT +
Preference number: 3 (lower is better)
Translates to: IGQTINNEGLSE*TQGGLLMLLGN
Trigger: ATTTCCTAACAACATGAGAAGTCCACCTTGTGTTCACTCAGACAAACCTTCATTGTTTATTGTTTGGCCAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CCA 72 bp GCTACAGTAATATTTCTGCTGGAGTCTTTGACTGTCTaGTGTAATAAGCAAAAGCAGATTATCATCTGCATT +
Preference number: 3 (lower is better)
Translates to: ATVIFLLESLTV*CNKQKQIIICI
Trigger: AATGCAGATGATAATCTGCTTTTGCTTATTACACCAGACAGTCAAAGACTCCAGCAGAAATATTACTGTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCGCCTGCCTGGGGCTGTaGCTGTGGCTGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWAACLGL*LWLRRW
Trigger: CCACCGCCGCAGCCACAGCCACAGCCCCAGGCAGGC...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CCCCGGAAGACAGTAGCTACAGAGCCTGGCTCCACAAACCTAAATATCCCCATCCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRKTVATEPGSTNLNIPIHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...GATGGGGATATTTAGGTTTGTGGAGCCAGGCTCTGTAGCTACTGTCTTCCGGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGCCTGCCTGGGGCTGTaGCTGTGGCTGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSACLGL*LWLRRW
Trigger: CCACCGCCGCAGCCACAGCCACAGCCCCAGGCAGGC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTGAGGAAATGCCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TRKALQPPEWSCPGLRKCQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWAACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWAGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTGCTGCTGTTGCTGCTaGGGGGCAGCATGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGCCCCC*GAAWGH
Trigger: ATGGCCCCATGCTGCCCCTCAGCAGCAACAGCAGCA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS-3UTR GCA 90 bp ACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTGAGGAAATGCGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: TRKALQPPEWSCPGLRKCASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGCCTGCCTGGGGCTGTaGCTGTGGCTGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSACLGL*LWLRRW
Trigger: CCACCGCCGCAGCCACAGCCACAGCCCCAGGCAGGC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGCGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGCAATCTTGGCGGGTaGACCCTTCGGATCACTCAC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGNLGG*TLRITH
Trigger: GTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTGAGGAAATGCACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TRKALQPPEWSCPGLRKCTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGCCTGCCTGGGGCTGTaGCTGTGGCTGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKACLGL*LWLRRW
Trigger: CCACCGCCGCAGCCACAGCCACAGCCCCAGGCAGGC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQAAGQN*RGWHLA
Trigger: AGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGGCAATCTTGGCGGGTaGACCCTTCGGATCACTCAC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSGNLGG*TLRITH
Trigger: GTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCTGGGAGAGAGGCTCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSLGERL*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGAGCCTCTCTCCCAG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS-3UTR GCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGGCGGCTGGGTGGTGTaGTCAGCAGCGGGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIGGWVV*SAAGQD
Trigger: GTCCTGCCCCGCTGCTGAGCACACCACCCAGCCGCC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWANLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQTGMQS*GPLPFG
Trigger: TCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSSHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQCSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGCCTGCCTGGGGCTGTaGCTGTGGCTGCGGCGGTGG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKACLGL*LWLRRW
Trigger: CCACCGCCGCAGCCACAGCCACAGCCCCAGGCAGGC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCACGGTGGGCTGCCGTaGGGGGAGTCTGGGGCCTGC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINHGGLP*GESGAC
Trigger: GCAGGCCCCAGACTCCCCCCACGGCAGCCCACCGTG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ACCAGGAAAGCCCTGCAGCCACCAGAATGGAGCTGCCCAGGCCTGAGGAAATGCTTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: TRKALQPPEWSCPGLRKCLTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...GCATTTCCTCAGGCCTGGGCAGCTCCATTCTGGTGGCTGCAGGGCTTTCCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGCKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSCCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCTTCTTTCCCCTGAGTTaGCTCGTTCAAATGATCCAT +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWAFFPLS*LVQMIH
Trigger: ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAA...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGTGATGCACAGCATTaGTCTCCTGCTCATAGATGG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGDAQH*SPAHRW
Trigger: CCATCTATGAGCAGGAGAGCAATGCTGTGCATCACC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQLTGGG*FKYCWF
Trigger: AAACCAACAGTACTTGAACCACCCTCCCCCTGTCAG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSCSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CCCCGGAAGACAGTAGCTACAGAGCCTGGCTCCACAAACCTAAATATCCCCATCGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: PRKTVATEPGSTNLNIPIGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...GATGGGGATATTTAGGTTTGTGGAGCCAGGCTCTGTAGCTACTGTCTTCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACACAGCCTACGAAAGTTTCTCTGGAGCCAGCCACAGCACACCAGCCTGGGCCTTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: NTAYESFSGASHSTPAWALTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...GGCCCAGGCTGGTGTGCTGTGGCTGGCTCCAGAGAAACTTTCGTAGGCTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAACTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKELLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGGTGATGCACAGCATTaGTCTCCTGCTCATAGATGG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSGDAQH*SPAHRW
Trigger: CCATCTATGAGCAGGAGAGCAATGCTGTGCATCACC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAACCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LSLKNQKLVCSRTAAFQGPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...ACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGATACGACAGTGGAACTaGATTCCACTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQIRQWN*IPLPNL
Trigger: CAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTAT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGCTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIAGQDP*LRLRSS
Trigger: GCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSLNLFC*NVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGATAGCCTCTTCATCTaGGTACAGGCCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSDSLFI*VQAHIL
Trigger: CAAGATGTGGGCCTGTACCCAGATGAAGAGGCTATC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATTGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSLAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CAA 72 bp GTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTaGACGCTTCACCCGGGGCTGCCAAGCAGTTTTGTA +
Preference number: 4 (lower is better)
Translates to: VQPLNTNSTKQS*TLHPGLPSSFV
Trigger: TACAAAACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGAGATCATGCTCTGTaGAAGGGGGCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGDHAL*KGALLG
Trigger: GCCAAGGAGTGCCCCCTTTCACAGAGCATGATCTCC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQNLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGCGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: IWEKEATDDNLWLAACYLRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAACGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKERGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAGCATGGGGCCATGGTaGAGGGGTCAGCAGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNSMGPW*RGQQAW
Trigger: CCAAGCCTGCTGACCCCTGCACCATGGCCCCATGCT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQLAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGLAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSLRKGC*RFYPGR
Trigger: GCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCCTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSLRKGC*RFYPGR
Trigger: GCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAG...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGGAGATCATGCTCTGTaGAAGGGGGCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRGDHAL*KGALLG
Trigger: GCCAAGGAGTGCCCCCTTTCACAGAGCATGATCTCC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGGAGATCATGCTCTGTaGAAGGGGGCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKGDHAL*KGALLG
Trigger: GCCAAGGAGTGCCCCCTTTCACAGAGCATGATCTCC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSAAGQN*RGWHLA
Trigger: AGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: IWEKEATDDNLWLAACYLAAGQN*RGWHLA
Trigger: AGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGC...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGGCAGGACCCATGGCTaGGGCTGCGTTCAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINGRTHG*GCVQAP
Trigger: AGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGTCTGTCGCCATGGTaGTGCACAGCATTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGGLSPW*CTALLS
Trigger: GGAGAGCAATGCTGTGCATCACCATGGCGACAGACC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNLLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRILLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAAAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTACGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTCGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCCAGGCGGGCAATCTTaGCGGGTGGACCCTTCGGAT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINPGGQS*RVDPSD
Trigger: ATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGLVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GACTCTGCTAAGGTTCTAACAGCACAAAGCACTATGTCATGCCCAGCCGAAACGGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: DSAKVLTAQSTMSCPAETEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...CGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTGTTAGAACCTTAGCAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCATGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSWFKDC*AKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSSHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKESHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: IWEKEATDDNLWLAACYLSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAGATAGCCTCTTCATCTaGGTACAGGCCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSDSLFI*VQAHIL
Trigger: CAAGATGTGGGCCTGTACCCAGATGAAGAGGCTATC...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGGAGATCATGCTCTGTaGAAGGGGGCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNGDHAL*KGALLG
Trigger: GCCAAGGAGTGCCCCCTTTCACAGAGCATGATCTCC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GTTCAAATGCCTTTGGCTCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAAGGAGATCATGCTCTGTaGAAGGGGGCACTCCTTGGC +
Preference number: 4 (lower is better)
Translates to: VQMPLAQVITLLNSSEQEGDHAL*KGALLG
Trigger: GCCAAGGAGTGCCCCCTTTCACAGAGCATGATCTCC...TTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGAGCCAAAGGCATTTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGLTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGAAGQN*RGWHLA
Trigger: AGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSCKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKLLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACCTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNLLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLLERG*CGEVCR
Trigger: GCGACAGACCTCCCCACATCATCCACGTTCCAGCAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSCCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTCTTTCCCCTGAGTTaGCTCGTTCAAATGATCCAT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSFFPLS*LVQMIH
Trigger: ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATTTCTTTCCCCTGAGTTaGCTCGTTCAAATGATCCAT +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNFFPLS*LVQMIH
Trigger: ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAA...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKRGLPF*SRRAIL
Trigger: CAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAACCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATCATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQLANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVTGMQS*GPLPFG
Trigger: TCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGTAGCTGTTTTCACCTaGGGAGGGCGGCTGGGTGGT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINVAVFT*GGRLGG
Trigger: ACCACCCAGCCGCCCTCCCCAGGTGAAAACAGCTAC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRSHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSCSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGATTGTTAGACATTTCTaGATGTTCTTTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGIVRHF*MFFPLS
Trigger: ACTCAGGGGAAAGAACATTCAGAAATGTCTAACAAT...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSSLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACACTTCCCAACCTGGATaGGCCCTTTGGCTTGGGCAG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINTSQPG*ALWLGQ
Trigger: CTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: GAALEHKFYQTVLDASPGYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNAAGQN*RGWHLA
Trigger: AGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHRTDRC*HKPRVQ
Trigger: CTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCT...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSCKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IWEKEATDDNLWLAACYLCKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKECKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGCCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTTCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LSLKNQKLVCSRTAAFQGSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...ACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCATGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSNCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACAC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKCGGNL*KQCLGH
Trigger: GTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGTGGCCTGGTCTTCTaGCGGTTTTCCTCATCGGAC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKRGLVF*RFSSSD
Trigger: GTCCGATGAGGAAAACCGGCAGAAGACCAGGCCACG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGGCAATCTTGGCGGGTaGACCCTTCGGATCACTCAC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINGNLGG*TLRITH
Trigger: GTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGGCAATCTTGGCGGGTaGACCCTTCGGATCACTCAC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKGNLGG*TLRITH
Trigger: GTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGCATGTCTGCCACCGTaGCATCAGGGGCATCTGTCA +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINACLPP*HQGHLS
Trigger: TGACAGATGCCCCTGATGCCACGGTGGCAGACATGC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IWEKEATDDNLWLAACYLWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKTGMQS*GPLPFG
Trigger: TCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRISHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRISPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGGAACGTGGATGATGTaGGGAGGTCTGTCGCCATGG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKGTWMM*GGLSPW
Trigger: CCATGGCGACAGACCTCCCCACATCATCCACGTTCC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRCSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVLNLFC*NVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAG...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGATAGCCTCTTCATCTaGGTACAGGCCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSDSLFI*VQAHIL
Trigger: CAAGATGTGGGCCTGTACCCAGATGAAGAGGCTATC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CAA 72 bp GTGCTGGCTGTCCTGTCCTTCCAACTTCCTTCCTGTTaGTGCAAGTTTCCGAAGATTCATTGGCCAAACAAT +
Preference number: 4 (lower is better)
Translates to: VLAVLSFQLPSC*CKFPKIHWPNN
Trigger: ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAAGGACAGGACAGCCAGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CAA 72 bp GCTCTGCCTCCTACTATCTTCATGTGGTTCTCAGTTTaGACAAAGGCAGTCCATGTTCACCTTGCCTACCTA +
Preference number: 4 (lower is better)
Translates to: ALPPTIFMWFSV*TKAVHVHLAYL
Trigger: TAGGTAGGCAAGGTGAACATGGACTGCCTTTGTCAAAACTGAGAACCACATGAAGATAGTAGGAGGCAGAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGCKYCL*DSGSFQ
Trigger: CTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCG +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNQAEAD*GIFGSS
Trigger: CGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTG...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRICCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHCCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAAATACAAATTCCGCGTaGTCCTCCTTGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSNTNSA*SSLQSY
Trigger: GTATGATTGCAAGGAGGAGCACGCGGAATTTGTATT...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCATCTTGAAGCATGTCTaGCACCGTGGCATCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGILKHV*HRGIRG
Trigger: GCCCCTGATGCCACGGTGGCAGACATGCTTCAAGAT...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGGTGATGCACAGCATTaGTCTCCTGCTCATAGATGG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRGDAQH*SPAHRW
Trigger: CCATCTATGAGCAGGAGAGCAATGCTGTGCATCACC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTCCTTTCCCAAGGGTaGTGGGAGAGAGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLLSQG*WERGSE
Trigger: TTCAGAGCCTCTCTCCCAGCACCCTTGGGAAAGGAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTTCCACTTCCCAACCTaGATGAGCCCTTTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIFHFPT*MSPLAW
Trigger: CCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGATACGACAGTGGAACTaGATTCCACTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVIRQWN*IPLPNL
Trigger: CAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTAT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAACTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKLTGGG*FKYCWF
Trigger: AAACCAACAGTACTTGAACCACCCTCCCCCTGTCAG...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTACTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLLTGGG*FKYCWF
Trigger: AAACCAACAGTACTTGAACCACCCTCCCCCTGTCAG...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCCTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAACTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKELSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTTTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCTCACACAGCCATCCCTaGCTTTTTGTGGCGGCAACC +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGSHSHP*LFVAAT
Trigger: GGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGA...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNCSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTGTTCTGCTGGAACGTaGATGATGTGGGGAGGTCTG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRICSAGT*MMWGGL
Trigger: CAGACCTCCCCACATCATCCACGTTCCAGCAGAACA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRLNLFC*NVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAG...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAACTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKELRKGC*RFYPGR
Trigger: GCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAG...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCCTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSLRKGC*RFYPGR
Trigger: GCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAG...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCATCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSSLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATGCTGGTTCAGCAACTaGGCCATCACCAGCTGTTGG +
Preference number: 4 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPCWFSN*AITSCW
Trigger: CCAACAGCTGGTGATGGCTCAGTTGCTGAACCAGCA...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKCCCCC*ICSAGT
Trigger: CGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCTCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATCTTGGATGAAACTCTaGAGGATCCCCAGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKSWMKL*RIPRAS
Trigger: GGAAGCCCTGGGGATCCTTCAGAGTTTCATCCAAGA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGCATCTTTCCACCTGTaGTCCCAAGCCTTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKASFHL*SQAFLF
Trigger: GAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGT +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGPRAPP*NHTQWR
Trigger: ACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGG...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp GTTCAAATGCCTTTGGCTCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAATTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: VQMPLAQVITLLNSSEQEFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...TTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGAGCCAAAGGCATTTGAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCACAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPQQRLG*SLGVLF
Trigger: GAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTG...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVNLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGGTGATGCACAGCATTaGTCTCCTGCTCATAGATGG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNGDAQH*SPAHRW
Trigger: CCATCTATGAGCAGGAGAGCAATGCTGTGCATCACC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAAGGTGATGCACAGCATTaGTCTCCTGCTCATAGATGG +
Preference number: 4 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQGDAQH*SPAHRW
Trigger: CCATCTATGAGCAGGAGAGCAATGCTGTGCATCACC...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTGGCAATCTTGGCGGGTaGACCCTTCGGATCACTCAC +
Preference number: 4 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFGNLGG*TLRITH
Trigger: GTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCC...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAATACGACAGTGGAACTaGATTCCACTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKIRQWN*IPLPNL
Trigger: CAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTAT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCAAAGGGGGCACTCCTTaGCCAACGAACTCTGGTTCA +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGKGGTP*PTNSGS
Trigger: TGAACCAGAGTTCGTTGGCCAAGGAGTGCCCCCTTT...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGTCCSQ*RRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNWPKLT*LAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNLTGGG*FKYCWF
Trigger: AAACCAACAGTACTTGAACCACCCTCCCCCTGTCAG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNTGMQS*GPLPFG
Trigger: TCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGT...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGA +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINTGMQS*GPLPFG
Trigger: TCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRILNLFC*NVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGATAGCCTCTTCATCTaGGTACAGGCCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIDSLFI*VQAHIL
Trigger: CAAGATGTGGGCCTGTACCCAGATGAAGAGGCTATC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGATAGCCTCTTCATCTaGGTACAGGCCCACATCTTG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNDSLFI*VQAHIL
Trigger: CAAGATGTGGGCCTGTACCCAGATGAAGAGGCTATC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACTGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTTTCCCAAGGGTGCTaGGAGAGAGGCTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLSQGC*ERGSES
Trigger: AGATTCAGAGCCTCTCTCCCAGCACCCTTGGGAAAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS-3UTR GCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTCTTTCCCCTGAGTTaGCTCGTTCAAATGATCCAT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSFFPLS*LVQMIH
Trigger: ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGAATACAAATTCCGCGTaGTCCTCCTTGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVNTNSA*SSLQSY
Trigger: GTATGATTGCAAGGAGGAGCACGCGGAATTTGTATT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACTTCCTTACTGTGGTGTaGGACCATTGTTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHFLTVV*DHCSGG
Trigger: GCCTCCTGAACAATGGTCGCACACCACAGTAAGGAA...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCCATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGG +
Preference number: 4 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPFPGTG*WPKLTW
Trigger: CCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVLVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKELVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATATACGACAGTGGAACTaGATTCCACTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNIRQWN*IPLPNL
Trigger: CAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTAT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGWFKDC*AKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTATGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLTGGG*FKYCWF
Trigger: AAACCAACAGTACTTGAACCACCCTCCCCCTGTCAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAACTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTTTCTCCTGCTCATAGATaGCATCGCGCTCAGGCTGAG +
Preference number: 4 (lower is better)
Translates to: NLIIAGVGHSFPITSEPFSPAHR*HRAQAE
Trigger: CTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGA...AAATGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGG +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGLNLFC*NVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAG...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACTTTTGGTTCGTGGCCTaGTCTTCTGCCGGTTTTCCT +
Preference number: 4 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHFWFVA*SSAGFP
Trigger: AGGAAAACCGGCAGAAGACCAGGCCACGAACCAAAA...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGTGCAGACAGAGTCTaGATAGCCTCTTCATCTGGG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKCADRV*IASSSG
Trigger: CCCAGATGAAGAGGCTATCCAGACTCTGTCTGCACA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRLAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSSLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGGGCAACTGTGTAACTaGATTTTGAGGGTGACCACA +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKGQLCN*ILRVTT
Trigger: TGTGGTCACCCTCAAAATTCAGTTACACAGTTGCCC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKFKGTP*IFPPVL
Trigger: GAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAATACAAATTCCGCGTaGTCCTCCTTGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGNTNSA*SSLQSY
Trigger: GTATGATTGCAAGGAGGAGCACGCGGAATTTGTATT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAACATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRICWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVNCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNNLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRLVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAATACGACAGTGGAACTaGATTCCACTTCCCAACCTG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKIRQWN*IPLPNL
Trigger: CAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTAT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGAGCATTCCTTACTGTaGTGTGCGACCATTGTTCAG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKEHSLL*CATIVQ
Trigger: CTGAACAATGGTCGCACACCACAGTAAGGAATGCTC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAATGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQWFKDC*AKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCA...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNWFKDC*AKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACAGACCTCCGTGTTTGTaGAAACTTGCTGCTCCAAAG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINRPPCL*KLAAPK
Trigger: CTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTTTCCCTCTCATCCTaGTATATCCGGTCTCTTTCG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLSLSS*YIRSLS
Trigger: CGAAAGAGACCGGATATACCAGGATGAGAGGGAAAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACA +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGIPGFL*RQPLQT
Trigger: TGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGAT...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRILAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKLRKGC*RFYPGR
Trigger: GCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAG...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCATTGTTAGACATTTCTaGATGTTCTTTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSIVRHF*MFFPLS
Trigger: ACTCAGGGGAAAGAACATTCAGAAATGTCTAACAAT...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAATTGTTAGACATTTCTaGATGTTCTTTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEIVRHF*MFFPLS
Trigger: ACTCAGGGGAAAGAACATTCAGAAATGTCTAACAAT...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKSLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKLTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAACATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCATTTGCATAGTACGTaGTGTTCACAATGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIHLHST*CSQWRR
Trigger: TCTCCTCCATTGTGAACAGCACGTACTATGCAAATG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKCWFKD*WAKSLF
Trigger: GAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGNCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKNLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINNLCKQ*LGHFST
Trigger: CGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNLVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTAGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKLANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTTTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: LSLKNQKLVCSRTAAFQGLANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...ACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRLANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINWFKDC*AKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKWFKYC*FKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTTGCAAACAGTGCTTaGGACACTTTAGCACGCTTC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINFANSA*DTLARF
Trigger: GAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCC +
Preference number: 4 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHLAFLS*TLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAA...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAATTGTTAGACATTTCTaGATGTTCTTTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKIVRHF*MFFPLS
Trigger: ACTCAGGGGAAAGAACATTCAGAAATGTCTAACAAT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNSLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCA +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRISLSAG*KAYPFS
Trigger: TGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNLTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATTCTTTCCCCTGAGTTaGCTCGTTCAAATGATCCAT +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKFFPLS*LVQMIH
Trigger: ATGGATCATTTGAACGAGGCAACTCAGGGGAAAGAA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAAATACAAATTCCGCGTaGTCCTCCTTGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKNTNSA*SSLQSY
Trigger: GTATGATTGCAAGGAGGAGCACGCGGAATTTGTATT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACAATACAAATTCCGCGTaGTCCTCCTTGCAATCATAC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINNTNSA*SSLQSY
Trigger: GTATGATTGCAAGGAGGAGCACGCGGAATTTGTATT...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNNCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRINCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCTTGGTTTTCATGAGATaGCCCGAGTGTTTTAAAGGC +
Preference number: 4 (lower is better)
Translates to: LEENIALTGGLYRKSRYGLVFMR*PECFKG
Trigger: GCCTTTAAAACACTCGGGCCATCTCATGAAAACCAA...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGCCATCTCTATCAGCTaGTTGAAAAGCATATCCTTT +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIAISIS*LKSISF
Trigger: AAAGGATATGCTTTTCAACCAGCTGATAGAGATGGC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRILANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACATTGTTAGACATTTCTaGATGTTCTTTCCCCTGAGT +
Preference number: 4 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHIVRHF*MFFPLS
Trigger: ACTCAGGGGAAAGAACATTCAGAAATGTCTAACAAT...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTGACATTTTGCTGCTaGGACATTTGCATAGTACGT +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLTFCC*DICIVR
Trigger: ACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR TCA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR GCA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACC +
Preference number: 4 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKNCKKF*IARRFT
Trigger: GGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTT...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTGGCCAACGAACTCTaGTTCATATCTTTCAGTAAG +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLANEL*FISFSK
Trigger: CTTACTGAAAGATATGAACCAGAGTTCGTTGGCCAA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CAA 72 bp TTAATTACGGCAGTGCCATACAATACAAGGCATTTGTaGGCATATGTCATCTTTAAACTGCATTCCACAGTC +
Preference number: 4 (lower is better)
Translates to: LITAVPYNTRHL*AYVIFKLHSTV
Trigger: GACTGTGGAATGCAGTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAATTAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR TCA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTC +
Preference number: 4 (lower is better)
Translates to: NFLPVCASFRRFIGQTINYPLSS*NVCTTF
Trigger: GAAGGTGGTACAAACATTTCAAGAAGACAAAGGATA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
3UTR CAA 72 bp ATTTTAATTACGGCAGTGCCATACAATACAAGGCATTaGTTGGCATATGTCATCTTTAAACTGCATTCCACA +
Preference number: 4 (lower is better)
Translates to: ILITAVPYNTRH*LAYVIFKLHST
Trigger: TGTGGAATGCAGTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAATTAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
3UTR CAA 72 bp TACTTTGCTCAACTCCAGCGAACAAGAAAGTTTGCATaGTTTTCTCTCTCACTTAAGAATCAGAAATTAGTT +
Preference number: 4 (lower is better)
Translates to: YFAQLQRTRKFA*FSLSLKNQKLV
Trigger: AACTAATTTCTGATTCTTAAGTGAGAGAGAAAACAATGCAAACTTTCTTGTTCGCTGGAGTTGAGCAAAGTA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS GCA 90 bp GCCCAGGGTGCAGGTTCGGAAGAGGGGTCCGGACAGAGGGCTGACTaGCGTGAGAGAGCTGCGCAGGGGATGGAGGCTGCTCAGCTGTGT +
Preference number: 5 (lower is better)
Translates to: AQGAGSEEGSGQRAD*RERAAQGMEAAQLC
Trigger: ACACAGCTGAGCAGCCTCCATCCCCTGCGCAGCTCTCTCACGGCAGTCAGCCCTCTGTCCGGACCCCTCTTCCGAACCTGCACCCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp GGTCCGGACAGAGGGCTGACTGCCGTGAGAGAGCTGCGCAGGGGATaGAGGCTGCTCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAA +
Preference number: 5 (lower is better)
Translates to: GPDRGLTAVRELRRG*RLLSCVSWDRLLAK
Trigger: TTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTCCATCCCCTGCGCAGCTCTCTCACGGCAGTCAGCCCTCTGTCCGGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp CCACCTGTGCTCCCAAGCCTTCCTCTTCCTAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTGGCGGGTGGACCCTTCGGATCACTC +
Preference number: 5 (lower is better)
Translates to: PPVLPSLPLPRGLPF*SRRAILAGGPFGSL
Trigger: GAGTGATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCTAGGAAGAGGAAGGCTTGGGAGCACAGGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp GTGAGAGAGCTGCGCAGGGGATGGAGGCTGCTCAGCTGTGTTTCCTaGGACAGGCTGCTGGCCAAAATTGACGTGGTTGGCACCTTGCTG +
Preference number: 5 (lower is better)
Translates to: VRELRRGWRLLSCVS*DRLLAKIDVVGTLL
Trigger: CAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTCCATCCCCTGCGCAGCTCTCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp AGCCATCACCAGCTGTTGGTTGACCAGCTGAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAGGTTCGGAAGAGGGGTCCGGACAGA +
Preference number: 5 (lower is better)
Translates to: SHHQLLVDQLRTDRC*HKPRVQVRKRGPDR
Trigger: TCTGTCCGGACCCCTCTTCCGAACCTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp TGCCACCGTGGCATCAGGGGCATCTGTCACATACGACAGTGGAACTaGATTCCACTTCCCAACCTGGATGAGCCCTTTGGCTTGGGCAGC +
Preference number: 5 (lower is better)
Translates to: CHRGIRGICHIRQWN*IPLPNLDEPFGLGS
Trigger: GCTGCCCAAGCCAAAGGGCTCATCCAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTATGTGACAGATGCCCCTGATGCCACGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp TGCTCTCCTGCTCATAGATGGCATCGCGCTCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCGACAGGTTCTCCCACAGGGTCCTGT +
Preference number: 5 (lower is better)
Translates to: CSPAHRWHRAQAEAD*GIFGSSTGSPTGSC
Trigger: ACAGGACCCTGTGGGAGAACCTGTCGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTGAGCGCGATGCCATCTATGAGCAGGAGAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp CTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGAATCTGTTCTaGTGGAACGTGGATGATGTGGGGAGGTCTGTCGCCATGGTGATG +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLLLNLF*WNVDDVGRSVAMVM
Trigger: CATCACCATGGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp CTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGGAGGTCTGTCGCCATGGTGATGCAC +
Preference number: 5 (lower is better)
Translates to: LLLLLLLLLLLNLFC*NVDDVGRSVAMVMH
Trigger: GTGCATCACCATGGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp GCTGCTGCTGTTGCTGCTGCTGAATCTGTTCTGCTGGAACGTGGATaGTGTGGGGAGGTCTGTCGCCATGGTGATGCACAGCATTGCTCT +
Preference number: 5 (lower is better)
Translates to: AAAVAAAESVLLERG*CGEVCRHGDAQHCS
Trigger: AGAGCAATGCTGTGCATCACCATGGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: GAALEHKFYQTVLDASPGDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp GAGGCTGCTCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCTGGGATAGTTCAGACAGACTATCCA +
Preference number: 5 (lower is better)
Translates to: EAAQLCFLGQAAGQN*RGWHLAGIVQTDYP
Trigger: TGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: GAALEHKFYQTVLDASPGAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAGTTTTCAAGGAGCCCATTTAGACCACCAGGAAAGCCCTGCAGCCACCAGAATACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: EFSRSPFRPPGKPCSHQNTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...ATTCTGGTGGCTGCAGGGCTTTCCTGGTGGTCTAAATGGGCTCCTTGAAAACTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQCGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GACTCTGCTAAGGTTCTAACAGCACAAAGCACTATGTCATGCCCAGCCGAAACGGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: DSAKVLTAQSTMSCPAETGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...CGTTTCGGCTGGGCATGACATAGTGCTTTGTGCTGTTAGAACCTTAGCAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQSNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp CAATCCCTGAGTTCGGTTAAAAGCCACGCGTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAGTTCATCCCGCACCCACTGGTAGAT +
Preference number: 5 (lower is better)
Translates to: QSLSSVKSHACKYCL*DSGSFQFIPHPLVD
Trigger: ATCTACCAGTGGGTGCGGGATGAACTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCACGCGTGGCTTTTAACCGAACTCAGGGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp AGGTTGGTTTTCATGAGATGGCCCGAGTGTTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTCCCAAGCCTTCCTCTTCCTAGAGGG +
Preference number: 5 (lower is better)
Translates to: RLVFMRWPECFKGTP*IFPPVLPSLPLPRG
Trigger: CCCTCTAGGAAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAAACACTCGGGCCATCTCATGAAAACCAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp CAACAGCTCACACAGCCATCCCTGGCTTTTTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACACTTTAGCACGCTTCATTTCCTGCTG +
Preference number: 5 (lower is better)
Translates to: QQLTQPSLAFCGGNL*KQCLGHFSTLHFLL
Trigger: CAGCAGGAAATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGAGCTGTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp TGCTCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGATAGTTCAGACAGACTATCCATCTCA +
Preference number: 5 (lower is better)
Translates to: CSAVFPGTGCWPKLT*LAPCWDSSDRLSIS
Trigger: TGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CTATGGAGCTGCTGGGTTCCCACACTGCCATCCACATTTCTGGCTGGCTTTAGCGTTCTTTCCCCTGAGTaGCCTCGTTCAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: LWSCWVPTLPSTFLAGFSVLSPE*PRSNDP
Trigger: TGGATCATTTGAACGAGGCAACTCAGGGGAAAGAAC...GCTAAAGCCAGCCAGAAATGTGGATGGCAGTGTGGGAACCCAGCAGCTCCATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKSRRAI*AGGPFG
Trigger: TCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTTCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGSRRAI*AGGPFG
Trigger: TCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGA...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTATCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLSRRAI*AGGPFG
Trigger: TCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGA...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSCGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSSNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp CTACTGACAGGGGGAGGGTGGTTCAAGTACTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTCACTGCATACTGCTGGTTCAGCAAC +
Preference number: 5 (lower is better)
Translates to: LLTGGGWFKYCWFKD*WAKSLFTAYCWFSN
Trigger: GTTGCTGAACCAGCAGTATGCAGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCCTGTCAGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp TGCTGCTCCAAAGGCTTGTTCATAGACCTACTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTTAAGGACTGCTGGGCTAAGAGTCTG +
Preference number: 5 (lower is better)
Translates to: CCSKGLFIDLLTGGG*FKYCWFKDCWAKSL
Trigger: CAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCCTGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNSRRAI*AGGPFG
Trigger: TCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CCCCGGAAGACAGTAGCTACAGAGCCTGGCTCCACAAACCTAAATATCCCCATCGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: PRKTVATEPGSTNLNIPIVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...GATGGGGATATTTAGGTTTGTGGAGCCAGGCTCTGTAGCTACTGTCTTCCGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS GCA 90 bp TTTCCTGGGACAGGCTGCTGGCCAAAATTGACGTGGTTGGCACCTTaGTGGGATAGTTCAGACAGACTATCCATCTCAACCATCATATCC +
Preference number: 5 (lower is better)
Translates to: FPGTGCWPKLTWLAP*WDSSDRLSISTIIS
Trigger: GGATATGATGGTTGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp TGGTATATCCGGTCTCTTTCGGCTTCCGGCAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACCAGCAGAGACTGGGATGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: WYIRSLSASGNCKKF*IARRFTSRDWDAVL
Trigger: CAAGACTGCATCCCAGTCTCTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTTGCCGGAAGCCGAAAGAGACCGGATATACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp ACACAGCCATCCCTGGCTTTTTGTGGCGGCAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACGCTTCATTTCCTGCTGAATCTCATC +
Preference number: 5 (lower is better)
Translates to: TQPSLAFCGGNLCKQ*LGHFSTLHFLLNLI
Trigger: GATGAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp CCTGGGACAGGCTGCTGGCCAAAATTGACGTGGTTGGCACCTTGCTaGGATAGTTCAGACAGACTATCCATCTCAACCATCATATCCTTT +
Preference number: 5 (lower is better)
Translates to: PGTGCWPKLTWLAPC*DSSDRLSISTIISF
Trigger: AAAGGATATGATGGTTGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGA +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINSRRAI*AGGPFG
Trigger: TCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GGTGCAGCCCTTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: GAALEHKFYQTVLDASPGLLLRH*HSTCCS
Trigger: TGAACAGCACGTACTATGCAAATGTCTCAGCAGCAA...CCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAAGGGCTGCACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp TTGTTCATAGACCTACTGACAGGGGGAGGGTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCTAAGAGTCTGTTCACTGCATACTGC +
Preference number: 5 (lower is better)
Translates to: LFIDLLTGGGWFKYC*FKDCWAKSLFTAYC
Trigger: GCAGTATGCAGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCCTGTCAGTAGGTCTATGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSLLLRH*HSTCCS
Trigger: TGAACAGCACGTACTATGCAAATGTCTCAGCAGCAA...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGTTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: NTNSTKQSLTLHPGLPSSLLLRH*HSTCCS
Trigger: TGAACAGCACGTACTATGCAAATGTCTCAGCAGCAA...ACTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVCGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKECGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGC +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNGCWPK*TWLAPC
Trigger: GCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GTTCAAATGCCTTTGGCTCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAAGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGG +
Preference number: 5 (lower is better)
Translates to: VQMPLAQVITLLNSSEQEDWDAV*GSSSFR
Trigger: CCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTC...TTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGAGCCAAAGGCATTTGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTGTGGCGGCAACCTTaGCAAACAGTGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSLWRQP*QTVLGT
Trigger: TGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTTGTGGCGGCAACCTTaGCAAACAGTGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: IWEKEATDDNLWLAACYLLWRQP*QTVLGT
Trigger: TGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCCTTGAGCCTGGCTCAAGTTACTTCACATAAGCAGACAAACCCTGCCATGTCAACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: SLSLAQVTSHKQTNPAMSTEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...TGACATGGCAGGGTTTGTCTGCTTATGTGAAGTAACTTGAGCCAGGCTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCATCTCTATCAGCTGGTaGAAAAGCATATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSISISW*KSISFL
Trigger: GAGAAAGGATATGCTTTTCAACCAGCTGATAGAGAT...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCAGGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: EHKFYQTVLDASPGAAKQVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...CTGCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ACAAATCACCAGCAAACAAGCCCCTCCCCTAAACTGTTTCCTGCAAAGGATTCTCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: TNHQQTSPSPKLFPAKDSLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...AGAATCCTTTGCAGGAAACAGTTTAGGGGAGGGGCTTGTTTGCTGGTGATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTGTGGCGGCAACCTTaGCAAACAGTGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRLWRQP*QTVLGT
Trigger: TGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATTGTGGCGGCAACCTTaGCAAACAGTGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKLWRQP*QTVLGT
Trigger: TGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACACCTCCAAGCCGGAGTaGTCCTTCAGCTTGCCATGG +
Preference number: 5 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHTSKPE*SFSLPW
Trigger: CCATGGCAAGCTGAAGGACAACTCCGGCTTGGAGGT...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGSNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp TGTGTGAATAGCCTAGAGACAGCAACGCCATCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCACCAATACAAATTCCGCGTGCTCCT +
Preference number: 5 (lower is better)
Translates to: CVNSLETATPSLSAG*KAYPFSPIQIPRAP
Trigger: AGGAGCACGCGGAATTTGTATTGGTGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGATGGCGTTGCTGTCTCTAGGCTATTCACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGTTCTTTCCCCTGAGTaGCCTCGTTCAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVVLSPE*PRSNDP
Trigger: TGGATCATTTGAACGAGGCAACTCAGGGGAAAGAAC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGTTCTTTCCCCTGAGTaGCCTCGTTCAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEVLSPE*PRSNDP
Trigger: TGGATCATTTGAACGAGGCAACTCAGGGGAAAGAAC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGCACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRICGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTGAACACAAATTCTACCAAACAGTCCTTGACGCTTCACCCGGGGCTGCCAAGCGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: LNTNSTKQSLTLHPGLPSVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...GCTTGGCAGCCCCGGGTGAAGCGTCAAGGACTGTTTGGTAGAATTTGTGTTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACAGCCATCACCAGCTGTaGGTTGACCAGCTGAGGACT +
Preference number: 5 (lower is better)
Translates to: ILYICTDFVTKCHTGRAHSHHQL*VDQLRT
Trigger: AGTCCTCAGCTGGTCAACCAACAGCTGGTGATGGCT...GTGTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAATGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKECCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGCCATCCCTGGCTTTTaGTGGCGGCAACCTTTGCAA +
Preference number: 5 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKAIPGF*WRQPLQ
Trigger: TTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: SKGKPISGIMLTGYNTWVVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...CACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRISNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNSNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GTTCAAATGCCTTTGGCTCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAAAGCAACTCCTCATCTTaGTACTCGGCCACATCCACC +
Preference number: 5 (lower is better)
Translates to: VQMPLAQVITLLNSSEQESNSSS*YSATST
Trigger: GGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCT...TTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGAGCCAAAGGCATTTGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKETEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTTCTTTCCCCTGAGTaGCCTCGTTCAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGVLSPE*PRSNDP
Trigger: TGGATCATTTGAACGAGGCAACTCAGGGGAAAGAAC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGTTCCTTTCCTAAGGTaGGTTTTCATGAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKVPFLR*VFMRWP
Trigger: GGGCCATCTCATGAAAACCAACCTTAGGAAAGGAAC...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGCACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAACACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTCACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCCATCTCAAGTACTTACACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: ALTGGLYRKSRYGHLKYLHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...TAAGTACTTGAGATGGCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp CTTGAAGAAAATATTGCCCTAACTGGAGGATTGTACAGAAAAAGCAGATATGGCTGTGGTGTGCGACCATaGTTCAGGAGGCAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: LEENIALTGGLYRKSRYGCGVRP*FRRQVF
Trigger: GAAGACTTGCCTCCTGAACAATGGTCGCACACCACA...GCCATATCTGCTTTTTCTGTACAATCCTCCAGTTAGGGCAATATTTTCTTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSLLLRH*HSTCCS
Trigger: TGAACAGCACGTACTATGCAAATGTCTCAGCAGCAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GGCACAATGGTGTTGCTTTCCAACACACTCATTTCCTTGGATACATCAATTCAACCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: GTMVLLSNTLISLDTSIQPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...TTGAATTGATGTATCCAAGGAAATGAGTGTGTTGGAAAGCAACACCATTGTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp ATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAATGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: IRGQFPKTSVAGYRRITKCCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...TTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRCCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTACGGCAGTGCCATACAATACAAGGCATTTGTTGGCATATGTCATCTTTAAACTTGTGGCGGCAACCTTaGCAAACAGTGCTTGGGACA +
Preference number: 5 (lower is better)
Translates to: LRQCHTIQGICWHMSSLNLWRQP*QTVLGT
Trigger: TGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAA...GTTTAAAGATGACATATGCCAACAAATGCCTTGTATTGTATGGCACTGCCGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRTEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGTEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 90 bp AAAGCATATCCTTTCTCACCAATACAAATTCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGTTTTCATAATGTTCCACCACGCAGA +
Preference number: 5 (lower is better)
Translates to: KAYPFSPIQIPRAPP*NHTQWRFHNVPPRR
Trigger: TCTGCGTGGTGGAACATTATGAAAACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGGAATTTGTATTGGTGAGAAAGGATATGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp TCTTCCTCTAGTTTCACTGAGAAAAGGGTGTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCCTTAAGCAACTCCTCATCTTTGTAC +
Preference number: 5 (lower is better)
Translates to: SSSSFTEKRVLAFLS*TLSSKSLSNSSSLY
Trigger: GTACAAAGATGAGGAGTTGCTTAAGGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGTGAAACTAGAGGAAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTCACATGATACACATCTaGAAGCATGTCTGCCACCGT +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIHMIHI*KHVCHR
Trigger: ACGGTGGCAGACATGCTTCAAGATGTGTATCATGTG...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CTCTCACTTAAGAATCAGAAATTAGTTTGCAGCAGAACAGCAGCCTTCCAAGGTTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCA +
Preference number: 5 (lower is better)
Translates to: LSLKNQKLVCSRTAAFQGLLLRH*HSTCCS
Trigger: TGAACAGCACGTACTATGCAAATGTCTCAGCAGCAA...ACCTTGGAAGGCTGCTGTTCTGCTGCAAACTAATTTCTGATTCTTAAGTGAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGT +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINPKLTW*APCWDS
Trigger: ACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTTGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRICCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNCCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTAAAATAAGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: FKIRGQFPKTSVAGYRRIVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...AATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCTTATTTTAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCATTTTATACATATGTACAGACTTTGTTACTAAGTGCCACACAGGTAGGGCACACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: AFYTYVQTLLLSATQVGHTEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...GTGCCCTACCTGTGTGGCACTTAGTAACAAAGTCTGTACATATGTATAAAATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACG +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNTEKRV*AFLSWT
Trigger: CGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGTTCTTTCCCCTGAGTaGCCTCGTTCAAATGATCCA +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINVLSPE*PRSNDP
Trigger: TGGATCATTTGAACGAGGCAACTCAGGGGAAAGAAC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AGGGGCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAATCTCTATCAGCTGGTaGAAAAGCATATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: RGQFPKTSVAGYRRITKEISISW*KSISFL
Trigger: GAGAAAGGATATGCTTTTCAACCAGCTGATAGAGAT...TTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGCCCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAATGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACA +
Preference number: 5 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKCCSKG*FIDLLT
Trigger: TGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCA...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTT +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINLCKQC*GHFSTL
Trigger: AAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAG...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp CAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAAGTACAGGCCCACATCTaGGATGAAACTCTGAAGGAT +
Preference number: 5 (lower is better)
Translates to: QLPSCLCKFPKIHWPNNKVQAHI*DETLKD
Trigger: ATCCTTCAGAGTTTCATCCAAGATGTGGGCCTGTAC...TTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 90 bp AATCTCATCATAAATGGAGGCATTAATGTTCATAGTATTGTTCTCTaGCTTCCCATTTCTCTCAGTGGCAAGGGTAGCTGTTTTCACCTG +
Preference number: 5 (lower is better)
Translates to: NLIINGGINVHSIVL*LPISLSGKGSCFHL
Trigger: CAGGTGAAAACAGCTACCCTTGCCACTGAGAGAAATGGGAAGCCAGAGAACAATACTATGAACATTAATGCCTCCATTTATGATGAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCTTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGTTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: IWEKEATDDNLWLAACYLFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGATCTCTATCAGCTGGTaGAAAAGCATATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRISISW*KSISFL
Trigger: GAGAAAGGATATGCTTTTCAACCAGCTGATAGAGAT...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTTGTAAAACACAGTAAAACCTTGAGTGCTGGCTGTCCTGTCCTTCCAACTTCCGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: FVKHSKTLSAGCPVLPTSVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...GGAAGTTGGAAGGACAGGACAGCCAGCACTCAAGGTTTTACTGTGTTTTACAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCTGGGAAAAGGAGGCCACAGATGATAATCTGTGGTTAGCAGCATGTTACTTGGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: IWEKEATDDNLWLAACYLVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...CAAGTAACATGCTGCTAACCACAGATTATCATCTGTGGCCTCCTTTTCCCAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS TCA 90 bp CTTGAAATGTTTGTACCACCTTCCAAATTCTTGACATTTTGCTGCTaGGACATTTGCATAGTACGTGCTGTTCACAATGGAGGAGATCAT +
Preference number: 5 (lower is better)
Translates to: LEMFVPPSKFLTFCC*DICIVRAVHNGGDH
Trigger: ATGATCTCCTCCATTGTGAACAGCACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTACAAACATTTCAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GCCAGTTTCCAAAGACTAGTGTGGCGGGTTACAGAAGAATTACTAAAGAAAAGGTTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: ASFQRLVWRVTEELLKKRFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...CCTTTTCTTTAGTAATTCTTCTGTAACCCGCCACACTAGTCTTTGGAAACTGGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATATCTCTATCAGCTGGTaGAAAAGCATATCCTTTCTC +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNISISW*KSISFL
Trigger: GAGAAAGGATATGCTTTTCAACCAGCTGATAGAGAT...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp ATCAAAAGGAAAACCAATTTCTGGTATCATGCTGACAGGGTACAACACCTGGGTGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: IKRKTNFWYHADRVQHLGVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...ACCCAGGTGTTGTACCCTGTCAGCATGATACCAGAAATTGGTTTTCCTTTTGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 90 bp GTTCAGACAGACTATCCATCTCAACCATCATATCCTTTGTCTTCTTaGAATGTTTGTACCACCTTCCAAATTCTTGACATTTTGCTGCTG +
Preference number: 5 (lower is better)
Translates to: VQTDYPSQPSYPLSS*NVCTTFQILDILLL
Trigger: CAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTACAAACATTTCAAGAAGACAAAGGATATGATGGTTGAGATGGATAGTCTGTCTGAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp TTCCAACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATTTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: FQLPSCLCKFPKIHWPNNFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...ATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp GTTCAAATGCCTTTGGCTCAAGTAATTACTTTGCTCAACTCCAGCGAACAAGAAGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: VQMPLAQVITLLNSSEQEVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...TTCTTGTTCGCTGGAGTTGAGCAAAGTAATTACTTGAGCCAAAGGCATTTGAAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACTTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AACTTCCTTCCTGTTTGTGCAAGTTTCCGAAGATTCATTGGCCAAACAATAAACGTCTTCTTGAAATGTTaGTACCACCTTCCAAATTCT +
Preference number: 5 (lower is better)
Translates to: NFLPVCASFRRFIGQTINVFLKC*YHLPNS
Trigger: AGAATTTGGAAGGTGGTACAAACATTTCAAGAAGAC...GTTTATTGTTTGGCCAATGAATCTTCGGAAACTTGCACAAACAGGAAGGAAGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS-3UTR CAA 90 bp AAGAATTTAATAATAGCAGGTGTGGGACACTCATTTCCAATCACTTCTGAACCATTCGGATCACTCACATaGTTAGACATTTCTGAATGT +
Preference number: 5 (lower is better)
Translates to: KNLIIAGVGHSFPITSEPFGSLT*LDISEC
Trigger: ACATTCAGAAATGTCTAACAATGTGAGTGATCCGAA...TGGTTCAGAAGTGATTGGAAATGAGTGTCCCACACCTGCTATTATTAAATTCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000144331.8
ENSMUST00000169480.8
CDS CAA 72 bp TGGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTaGCTGCTGAGGGGCAGCATGGGGCCATGGTGCAGG +
Preference number: 6 (lower is better)
Translates to: WLLLLLLLLLLL*LLRGSMGPWCR
Trigger: CCTGCACCATGGCCCCATGCTGCCCCTCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS GCA 72 bp CTCCCAAGCCTTCCTCTTCCTAGAGGGCTCCCGTTCTaGTCCAGGCGGGCAATCTTGGCGGGTGGACCCTTC +
Preference number: 6 (lower is better)
Translates to: LPSLPLPRGLPF*SRRAILAGGPF
Trigger: GAAGGGTCCACCCGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCTAGGAAGAGGAAGGCTTGGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GGCTGGGTGGTGTGCTCAGCAGCGGGGCAGGACCCATaGCTGAGGCTGCGTTCAAGCTCCTTTCCCTCTCAT +
Preference number: 6 (lower is better)
Translates to: GWVVCSAAGQDP*LRLRSSSFPSH
Trigger: ATGAGAGGGAAAGGAGCTTGAACGCAGCCTCAGCCATGGGTCCTGCCCCGCTGCTGAGCACACCACCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp TGGCGGCGGTGGCTGCTGCTGCTGCTGCTGTTGCTGCTGCTGCTGTaGCTGCTGCTGAATCTGTTCTGCTGGAACGTGGATGATGTGGGG +
Preference number: 6 (lower is better)
Translates to: WRRWLLLLLLLLLLL*LLLNLFCWNVDDVG
Trigger: CCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCAGCAGCAGCCACCGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp CCCAAGGGTGCTGGGAGAGAGGCTCTGAATCTGTTCTaGTGGAACGTGGATGATGTGGGGAGGTCTGTCGCC +
Preference number: 6 (lower is better)
Translates to: PKGAGREALNLF*WNVDDVGRSVA
Trigger: GGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGAGCCTCTCTCCCAGCACCCTTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS CAA 72 bp CCTAGAGGGCTCCCGTTCTGCTCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGATCACTCACATTGTTA +
Preference number: 6 (lower is better)
Translates to: PRGLPFCSRRAI*AGGPFGSLTLL
Trigger: TAACAATGTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCTAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp CAGCTGTTGGTTGACCAGCTGAGGACTGATCGGTGTTaGCACAAGCCCAGGGTGCAGGTTCGGAAGAGGGGT +
Preference number: 6 (lower is better)
Translates to: QLLVDQLRTDRC*HKPRVQVRKRG
Trigger: ACCCCTCTTCCGAACCTGCACCCTGGGCTTGTGTCAACACCGATCAGTCCTCAGCTGGTCAACCAACAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp GATGGAGGCTGCTCAGCTGTGTTTCCTGGGACAGGCTaGTGGCCAAAATTGACGTGGTTGGCACCTTGCTGG +
Preference number: 6 (lower is better)
Translates to: DGGCSAVFPGTG*WPKLTWLAPCW
Trigger: CCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GGAGGCTGCTCAGCTGTGTTTCCTGGGACAGGCTGCTaGCCAAAATTGACGTGGTTGGCACCTTGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: GGCSAVFPGTGC*PKLTWLAPCWD
Trigger: ATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp CACCGTGGCATCAGGGGCATCTGTCACATACGACAGTaGAACTGGATTCCACTTCCCAACCTGGATGAGCCC +
Preference number: 6 (lower is better)
Translates to: HRGIRGICHIRQ*NWIPLPNLDEP
Trigger: GGGCTCATCCAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTATGTGACAGATGCCCCTGATGCCACGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp CTGCTGCTGCTGTTGCTGCTGCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGGAGGTCTGTCGCCATG +
Preference number: 6 (lower is better)
Translates to: LLLLLLLLNLFC*NVDDVGRSVAM
Trigger: CATGGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp AAGGGTGCTGGGAGAGAGGCTCTGAATCTGTTCTGCTaGAACGTGGATGATGTGGGGAGGTCTGTCGCCATG +
Preference number: 6 (lower is better)
Translates to: KGAGREALNLFC*NVDDVGRSVAM
Trigger: CATGGCGACAGACCTCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGAGCCTCTCTCCCAGCACCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000140979.8
CDS CAA 90 bp CTTCCTCTTCCTAGAGGGCTCCCGTTCTGCTCCAGGCGGGCAATCTaGGCGGGTGGACCCTTCGGATCACTCACATTGTTAGACATTTCT +
Preference number: 6 (lower is better)
Translates to: LPLPRGLPFCSRRAI*AGGPFGSLTLLDIS
Trigger: AGAAATGTCTAACAATGTGAGTGATCCGAAGGGTCCACCCGCCAAGATTGCCCGCCTGGAGCAGAACGGGAGCCCTCTAGGAAGAGGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp GGAGGCTGCTCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGCTGGGATAGTTCAGACAGACTATCC +
Preference number: 6 (lower is better)
Translates to: GGCSAVFPGTGCWPK*TWLAPCWDSSDRLS
Trigger: GGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGAGCAGCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp GCTCATAGATGGCATCGCGCTCAGGCTGAGGCAGACTaGGGAATCTTCGGATCATCGACAGGTTCTCCCACA +
Preference number: 6 (lower is better)
Translates to: AHRWHRAQAEAD*GIFGSSTGSPT
Trigger: TGTGGGAGAACCTGTCGATGATCCGAAGATTCCTCAGTCTGCCTCAGCCTGAGCGCGATGCCATCTATGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp TGCTGCTGCTGTTGCTGCTGCTGCTGTTGCTGCTGCTaGATCTGTTCTGCTGGAACGTGGATGATGTGGGGA +
Preference number: 6 (lower is better)
Translates to: CCCCCCCCCCCC*ICSAGTWMMWG
Trigger: TCCCCACATCATCCACGTTCCAGCAGAACAGATTCAGCAGCAGCAACAGCAGCAGCAGCAACAGCAGCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GGCATCAGGGGCATCTGTCACATACGACAGTGGAACTaGATTCCACTTCCCAACCTGGATGAGCCCTTTGGC +
Preference number: 6 (lower is better)
Translates to: GIRGICHIRQWN*IPLPNLDEPFG
Trigger: GCCAAAGGGCTCATCCAGGTTGGGAAGTGGAATCCAGTTCCACTGTCGTATGTGACAGATGCCCCTGATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp CAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATTaGCGTGGTTGGCACCTTGCTGGGATAGTTCAGACA +
Preference number: 6 (lower is better)
Translates to: QLCFLGQAAGQN*RGWHLAGIVQT
Trigger: TGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp CTGCATAGCCCGAAGGTTTACCAGCAGAGACTGGGATaGAGTCTTGGGGTCCTCTTCCTTTCGGAGGATTTC +
Preference number: 6 (lower is better)
Translates to: LHSPKVYQQRLG*SLGVLFLSEDF
Trigger: GAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTGGTAAACCTTCGGGCTATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp AGCGCAACAGCTCACACAGCCATCCCTGGCTTTTTGTaGCGGCAACCTTTGCAAACAGTGCTTGGGACACTT +
Preference number: 6 (lower is better)
Translates to: SATAHTAIPGFL*RQPLQTVLGTL
Trigger: AAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGTGAGCTGTTGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp TCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATaGACGTGGTTGGCACCTTGCTGGGATAGTTCAGAC +
Preference number: 6 (lower is better)
Translates to: SAVFPGTGCWPK*TWLAPCWDSSD
Trigger: GTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp GCCCGAAGGTTTACCAGCAGAGACTGGGATGCAGTCTaGGGGTCCTCTTCCTTTCGGAGGATTTCAGAAAGC +
Preference number: 6 (lower is better)
Translates to: ARRFTSRDWDAV*GSSSFRRISES
Trigger: GCTTTCTGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTGGTAAACCTTCGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp AGTTCGGTTAAAAGCCACGCGTGCAAATACTGCCTGTaGGATTCCGGCTCGTTTCAGTTCATCCCGCACCCA +
Preference number: 6 (lower is better)
Translates to: SSVKSHACKYCL*DSGSFQFIPHP
Trigger: TGGGTGCGGGATGAACTGAAACGAGCCGGAATCTCACAGGCAGTATTTGCACGCGTGGCTTTTAACCGAACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp GGGGGAGGGTGGTTCAAGTACTGTTGGTTTAAGGACTaGTGGGCTAAGAGTCTGTTCACTGCATACTGCTGG +
Preference number: 6 (lower is better)
Translates to: GGGWFKYCWFKD*WAKSLFTAYCW
Trigger: CCAGCAGTATGCAGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GTGTTTCCTGGGACAGGCTGCTGGCCAAAATTGACGTaGTTGGCACCTTGCTGGGATAGTTCAGACAGACTA +
Preference number: 6 (lower is better)
Translates to: VFPGTGCWPKLT*LAPCWDSSDRL
Trigger: TAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp CCCGAAGGTTTACCAGCAGAGACTGGGATGCAGTCTTaGGGTCCTCTTCCTTTCGGAGGATTTCAGAAAGCA +
Preference number: 6 (lower is better)
Translates to: PEGLPAETGMQS*GPLPFGGFQKA
Trigger: TGCTTTCTGAAATCCTCCGAAAGGAAGAGGACCCCAAGACTGCATCCCAGTCTCTGCTGGTAAACCTTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp TTTCCTGGGACAGGCTGCTGGCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGTTCAGACAGACTATCC +
Preference number: 6 (lower is better)
Translates to: FPGTGCWPKLTW*APCWDSSDRLS
Trigger: GGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp ACCTCCGTGTTTGTGGAAACTTGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACAGGGGGAGGGTGGTTC +
Preference number: 6 (lower is better)
Translates to: TSVFVETCCSKG*FIDLLTGGGWF
Trigger: GAACCACCCTCCCCCTGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCAAGTTTCCACAAACACGGAGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp TCAGCTGTGTTTCCTGGGACAGGCTGCTGGCCAAAATTGACGTGGTaGGCACCTTGCTGGGATAGTTCAGACAGACTATCCATCTCAACC +
Preference number: 6 (lower is better)
Translates to: SAVFPGTGCWPKLTW*APCWDSSDRLSIST
Trigger: GGTTGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGTCCCAGGAAACACAGCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp TTATCCTGGACGCTCTCTTCCAAATCCTTAAGCAACTCCTCATCTTaGTACTCGGCCACATCCACCTCCAAGCCGGAGTTGTCCTTCAGC +
Preference number: 6 (lower is better)
Translates to: LSWTLSSKSLSNSSS*YSATSTSKPELSFS
Trigger: GCTGAAGGACAACTCCGGCTTGGAGGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCTTAAGGATTTGGAAGAGAGCGTCCAGGATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp TTCATGAGATGGCCCGAGTGTTTTAAAGGCACTCCCTaGATCTTTCCACCTGTGCTCCCAAGCCTTCCTCTT +
Preference number: 6 (lower is better)
Translates to: FMRWPECFKGTP*IFPPVLPSLPL
Trigger: AAGAGGAAGGCTTGGGAGCACAGGTGGAAAGATGCAGGGAGTGCCTTTAAAACACTCGGGCCATCTCATGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENSMUST00000124222.2
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp ACAGGCTGCTGGCCAAAATTGACGTGGTTGGCACCTTaGTGGGATAGTTCAGACAGACTATCCATCTCAACC +
Preference number: 6 (lower is better)
Translates to: TGCWPKLTWLAP*WDSSDRLSIST
Trigger: GGTTGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp CGGTCTCTTTCGGCTTCCGGCAACTGTAAGAAATTCTaGATAGCCCGAAGGTTTACCAGCAGAGACTGGGAT +
Preference number: 6 (lower is better)
Translates to: RSLSASGNCKKF*IARRFTSRDWD
Trigger: ATCCCAGTCTCTGCTGGTAAACCTTCGGGCTATGCAGAATTTCTTACAGTTGCCGGAAGCCGAAAGAGACCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp TCCCTGGCTTTTTGTGGCGGCAACCTTTGCAAACAGTaGTTGGGACACTTTAGCACGCTTCATTTCCTGCTG +
Preference number: 6 (lower is better)
Translates to: SLAFCGGNLCKQ*LGHFSTLHFLL
Trigger: CAGCAGGAAATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp ACACAGCCATCCCTGGCTTTTTGTGGCGGCAACCTTTaGAAACAGTGCTTGGGACACTTTAGCACGCTTCAT +
Preference number: 6 (lower is better)
Translates to: TQPSLAFCGGNL*KQCLGHFSTLH
Trigger: ATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GGCTGCTGGCCAAAATTGACGTGGTTGGCACCTTGCTaGGATAGTTCAGACAGACTATCCATCTCAACCATC +
Preference number: 6 (lower is better)
Translates to: GCWPKLTWLAPC*DSSDRLSISTI
Trigger: GATGGTTGAGATGGATAGTCTGTCTGAACTATCCCAGCAAGGTGCCAACCACGTCAATTTTGGCCAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GACCTACTGACAGGGGGAGGGTGGTTCAAGTACTGTTaGTTTAAGGACTGCTGGGCTAAGAGTCTGTTCACT +
Preference number: 6 (lower is better)
Translates to: DLLTGGGWFKYC*FKDCWAKSLFT
Trigger: AGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCCTGTCAGTAGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GATCATCGACAGGTTCTCCCACAGGGTCCTGTTTTCTaGAGAAGGATCTTCTTTCCAGCGCAACAGCTCACA +
Preference number: 6 (lower is better)
Translates to: DHRQVLPQGPVF*RRIFFPAQQLT
Trigger: TGTGAGCTGTTGCGCTGGAAAGAAGATCCTTCTCCAGAAAACAGGACCCTGTGGGAGAACCTGTCGATGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp ACGCTCTCTTCCAAATCCTTAAGCAACTCCTCATCTTaGTACTCGGCCACATCCACCTCCAAGCCGGAGTTG +
Preference number: 6 (lower is better)
Translates to: TLSSKSLSNSSS*YSATSTSKPEL
Trigger: CAACTCCGGCTTGGAGGTGGATGTGGCCGAGTACAAAGATGAGGAGTTGCTTAAGGATTTGGAAGAGAGCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp TCAGAAGAGACCTCCGTGTTTGTGGAAACTTGCTGCTCCAAAGGCTaGTTCATAGACCTACTGACAGGGGGAGGGTGGTTCAAGTACTGT +
Preference number: 6 (lower is better)
Translates to: SEETSVFVETCCSKG*FIDLLTGGGWFKYC
Trigger: ACAGTACTTGAACCACCCTCCCCCTGTCAGTAGGTCTATGAACAAGCCTTTGGAGCAGCAAGTTTCCACAAACACGGAGGTCTCTTCTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp CTGCTGAGACATTTGCATAGTACGTGCTGTTCACAATaGAGGAGATCATGCTCTGTGAAAGGGGGCACTCCT +
Preference number: 6 (lower is better)
Translates to: LLRHLHSTCCSQ*RRSCSVKGGTP
Trigger: AGGAGTGCCCCCTTTCACAGAGCATGATCTCCTCCATTGTGAACAGCACGTACTATGCAAATGTCTCAGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp GGAGGGTGGTTCAAGTACTGTTGGTTTAAGGACTGCTaGGCTAAGAGTCTGTTCACTGCATACTGCTGGTTC +
Preference number: 6 (lower is better)
Translates to: GGWFKYCWFKDC*AKSLFTAYCWF
Trigger: GAACCAGCAGTATGCAGTGAACAGACTCTTAGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp AAAGGCTTGTTCATAGACCTACTGACAGGGGGAGGGTaGTTCAAGTACTGTTGGTTTAAGGACTGCTGGGCT +
Preference number: 6 (lower is better)
Translates to: KGLFIDLLTGGG*FKYCWFKDCWA
Trigger: AGCCCAGCAGTCCTTAAACCAACAGTACTTGAACCACCCTCCCCCTGTCAGTAGGTCTATGAACAAGCCTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp CAGCCATCCCTGGCTTTTTGTGGCGGCAACCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTTCATTTCCTGCTGAATCTCATCATA +
Preference number: 6 (lower is better)
Translates to: QPSLAFCGGNLCKQC*GHFSTLHFLLNLII
Trigger: TATGATGAGATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAGGGATGGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp CTGGCTTTTTGTGGCGGCAACCTTTGCAAACAGTGCTaGGGACACTTTAGCACGCTTCATTTCCTGCTGAAT +
Preference number: 6 (lower is better)
Translates to: LAFCGGNLCKQC*GHFSTLHFLLN
Trigger: ATTCAGCAGGAAATGAAGCGTGCTAAAGTGTCCCAAGCACTGTTTGCAAAGGTTGCCGCCACAAAAAGCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp CCTTCCACCGACAGCTCTTCCTCTAGTTTCACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACGCTCTCTTCCAAATCCTTAAGCAAC +
Preference number: 6 (lower is better)
Translates to: PSTDSSSSSFTEKRV*AFLSWTLSSKSLSN
Trigger: GTTGCTTAAGGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGTGAAACTAGAGGAAGAGCTGTCGGTGGAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 72 bp GACAGCTCTTCCTCTAGTTTCACTGAGAAAAGGGTGTaGGCGTTTTTATCCTGGACGCTCTCTTCCAAATCC +
Preference number: 6 (lower is better)
Translates to: DSSSSSFTEKRV*AFLSWTLSSKS
Trigger: GGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGTGAAACTAGAGGAAGAGCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp ACAGCTCTTCCTCTAGTTTCACTGAGAAAAGGGTGTTaGCGTTTTTATCCTGGACGCTCTCTTCCAAATCCT +
Preference number: 6 (lower is better)
Translates to: TALPLVSLRKGC*RFYPGRSLPNP
Trigger: AGGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGTGAAACTAGAGGAAGAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS TCA 72 bp AGCCTAGAGACAGCAACGCCATCTCTATCAGCTGGTTaGAAAGCATATCCTTTCTCACCAATACAAATTCCG +
Preference number: 6 (lower is better)
Translates to: SLETATPSLSAG*KAYPFSPIQIP
Trigger: CGGAATTTGTATTGGTGAGAAAGGATATGCTTTTCAACCAGCTGATAGAGATGGCGTTGCTGTCTCTAGGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CCA 72 bp AGTTTCACTGAGAAAAGGGTGTTGGCGTTTTTATCCTaGACGCTCTCTTCCAAATCCTTAAGCAACTCCTCA +
Preference number: 6 (lower is better)
Translates to: SFTEKRVLAFLS*TLSSKSLSNSS
Trigger: TGAGGAGTTGCTTAAGGATTTGGAAGAGAGCGTCCAGGATAAAAACGCCAACACCCTTTTCTCAGTGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS CAA 90 bp GTTTGTACCACCTTCCAAATTCTTGACATTTTGCTGCTGAGACATTaGCATAGTACGTGCTGTTCACAATGGAGGAGATCATGCTCTGTG +
Preference number: 6 (lower is better)
Translates to: VCTTFQILDILLLRH*HSTCCSQWRRSCSV
Trigger: CACAGAGCATGATCTCCTCCATTGTGAACAGCACGTACTATGCAAATGTCTCAGCAGCAAAATGTCAAGAATTTGGAAGGTGGTACAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8
CDS GCA 72 bp CCTTTCTCACCAATACAAATTCCGCGTGCTCCTCCTTaGAATCATACTCAATGGCGTTTTCATAATGTTCCA +
Preference number: 6 (lower is better)
Translates to: PFSPIQIPRAPP*NHTQWRFHNVP
Trigger: TGGAACATTATGAAAACGCCATTGAGTATGATTGCAAGGAGGAGCACGCGGAATTTGTATTGGTGAGAAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000129205.8
ENSMUST00000129667.8
ENSMUST00000133574.8
ENSMUST00000140979.8
ENSMUST00000144331.8
ENSMUST00000152830.9
ENSMUST00000169480.8
ENSMUST00000176669.8