Pregenerated sensors for SAT1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025283Ensembl transcript IDs: ENSMUST00000026318.15, ENSMUST00000112551.4, ENSMUST00000152463.8
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AACCACATACATGACTGCCACTTTAAACAGACCGAATTTCAAACATaGAACAACGTCACTGGTAATAAAGCTTTGGAATGGGTGCTCGCT | + |
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Preference number: 1 (lower is better) Translates to: NHIHDCHFKQTEFQT*NNVTGNKALEWVLA Trigger: AGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGTTGCATGTTTGAAATTCGGTCTGTTTAAAGTGGCAGTCATGTATGTGGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR GCA 90 bp | AAGATCATACCACCTTGTTCTTCATCAAAAGATGTTCAAGAATTCTaGCTCCAAACCACATACATGACTGCCACTTTAAACAGACCGAAT | + |
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Preference number: 1 (lower is better) Translates to: KIIPPCSSSKDVQEF*LQTTYMTATLNRPN Trigger: ATTCGGTCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTTGATGAAGAACAAGGTGGTATGATCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACAGACCTCTGCTACCAAGAAGTaGATACTGCTGCAGCGACAC | + |
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Preference number: 2 (lower is better) Translates to: CSRILPPNHIHDCHFKQTSATKK*ILLQRH Trigger: GTGTCGCTGCAGCAGTATGCACTTCTTGGTAGCAGA...GGTCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACAGAACTCTTTGTCAATCTTaGAGAGCCTCCATCCCTCTT | + |
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Preference number: 2 (lower is better) Translates to: DVQEFCLQTTYMTATLNRTLCQS*RASIPL Trigger: AAGAGGGATGGAGGCTCTTCAAGATTGACAAAGAGT...TCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| 3UTR-3UTR CCA 90 bp | TGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGCTGTATTCTAAAGCACAATaGAGGTTGTCATTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: WVLALLFHYTQDRKQGKLYSKAQ*RLSLST Trigger: TGTAGACAATGACAACCTCCATTGTGCTTTAGAATA...CAGCTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR-3UTR GCA 90 bp | TCATCAAAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTACCGAATTTCAAACATaGAACAACGTCACTGGTAAT | + |
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Preference number: 2 (lower is better) Translates to: SSKDVQEFCLQTTYMTATTEFQT*NNVTGN Trigger: ATTACCAGTGACGTTGTTGCATGTTTGAAATTCGGT...AGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTTGATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR-3UTR GCA 90 bp | AAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACGATGTTCAAGAATTCTaGCTCCAAACCACATACATG | + |
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Preference number: 2 (lower is better) Translates to: KDVQEFCLQTTYMTATLNDVQEF*LQTTYM Trigger: CATGTATGTGGTTTGGAGGCAGAATTCTTGAACATC...GTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR-3UTR GCA 90 bp | AATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCTTTGGAATGGGTaGTCGCTCTATTATTTCACT | + |
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Preference number: 2 (lower is better) Translates to: NKALEWVLALLFHYTQDRKLWNG*SLYYFT Trigger: AGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTT...TCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR-3UTR GCA 90 bp | ATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAAGCTTTGGAATGGGTaGTCGCTCTATTATTTCACT | + |
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Preference number: 2 (lower is better) Translates to: IKLWNGCSLYYFTTHKIEKLWNG*SLYYFT Trigger: AGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTT...TTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR-3UTR CCA 90 bp | AACAACGTCACTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTATTCTAAAGCACAATaGAGGTTGTCATTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: NNVTGNKALEWVLALLFHYSKAQ*RLSLST Trigger: TGTAGACAATGACAACCTCCATTGTGCTTTAGAATA...GTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR-3UTR CCA 90 bp | TCATCAAAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTAATAAAGCTTTGGAATaGGTGCTCGCTCTATTATTT | + |
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Preference number: 2 (lower is better) Translates to: SSKDVQEFCLQTTYMTATNKALE*VLALLF Trigger: AAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT...AGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTTGATGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR-3UTR CCA 90 bp | CTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGCTGAGAATTTATTCTAAAGCACAATaGAGGTTGTCATTGTCTACA | + |
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Preference number: 2 (lower is better) Translates to: LALLFHYTQDRKQGKLRIYSKAQ*RLSLST Trigger: TGTAGACAATGACAACCTCCATTGTGCTTTAGAATA...AATTCTCAGCTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR-3UTR CCA 90 bp | ATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAATAAAGCTTTGGAATaGGTGCTCGCTCTATTATTT | + |
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Preference number: 2 (lower is better) Translates to: IKLWNGCSLYYFTTHKIENKALE*VLALLF Trigger: AAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT...TTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR GCA 72 bp | GCAACAACGTCACTGGTAATAAAGCTTTGGAATGGGTaGTCGCTCTATTATTTCACTACACACAAGATAGAA | + |
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Preference number: 3 (lower is better) Translates to: ATTSLVIKLWNG*SLYYFTTHKIE Trigger: TTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR GCA 72 bp | CATGACTGCCACTTTAAACAGACCGAATTTCAAACATaGAACAACGTCACTGGTAATAAAGCTTTGGAATGG | + |
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Preference number: 3 (lower is better) Translates to: HDCHFKQTEFQT*NNVTGNKALEW Trigger: CCATTCCAAAGCTTTATTACCAGTGACGTTGTTGCATGTTTGAAATTCGGTCTGTTTAAAGTGGCAGTCATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR GCA 72 bp | TGTTCAAGAATTCTGCCTCCAAACCACATACATGACTaGCACTTTAAACAGACCGAATTTCAAACATGCAAC | + |
|
Preference number: 3 (lower is better) Translates to: CSRILPPNHIHD*HFKQTEFQTCN Trigger: GTTGCATGTTTGAAATTCGGTCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| 3UTR CCA 72 bp | ACATGCAACAACGTCACTGGTAATAAAGCTTTGGAATaGGTGCTCGCTCTATTATTTCACTACACACAAGAT | + |
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Preference number: 3 (lower is better) Translates to: TCNNVTGNKALE*VLALLFHYTQD Trigger: ATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGTTGCATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| 3UTR CAA 72 bp | AGGGAAGCTGAGAATTATTCTAAAGCACAATGGAGGTaGTCATTGTCTACACCGGCACGCCTCACTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: REAENYSKAQWR*SLSTPARLTPL Trigger: CAGAGGAGTGAGGCGTGCCGGTGTAGACAATGACAACCTCCATTGTGCTTTAGAATAATTCTCAGCTTCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | AAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCGTCGCAGGATGTCACTaGAGTCAGAGGCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: KLWNGCSLYYFTTHKIESVAGCH*SQRQWL Trigger: CAGCCACTGCCTCTGACTGCAGTGACATCCTGCGAC...GCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | CAAGATAGAAAGCAAGGGAAGCTGAGAATTATTCTAAAGCACAATGGAGGTTGTGTCGCAGGATGTCACTaGAGTCAGAGGCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: QDRKQGKLRIILKHNGGCVAGCH*SQRQWL Trigger: CAGCCACTGCCTCTGACTGCAGTGACATCCTGCGAC...ACAACCTCCATTGTGCTTTAGAATAATTCTCAGCTTCCCTTGCTTTCTATCTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | ACTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGTCGCAGGATGTCACTaGAGTCAGAGGCAGTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: TGNKALEWVLALLFHYTQVAGCH*SQRQWL Trigger: CAGCCACTGCCTCTGACTGCAGTGACATCCTGCGAC...TTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | GAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGTGGCGAACCCAACAATaGTATGTCCTTCAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: EWVLALLFHYTQDRKQGKWRTQQ*YVLQGS Trigger: GGACCCCTGAAGGACATAGCATTGTTGGGTTCGCCA...CTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | TGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGCTGTCTGCTACCAAGAAGTaGATACTGCTGCAGCGACAC | + |
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Preference number: 4 (lower is better) Translates to: WVLALLFHYTQDRKQGKLSATKK*ILLQRH Trigger: GTGTCGCTGCAGCAGTATGCACTTCTTGGTAGCAGA...CAGCTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | AAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCCCTTCAGGGGTCCAGTaGTCTTTAGGCACTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KLWNGCSLYYFTTHKIESPSGVQ*SLGTSA Trigger: TGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGG...GCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | CTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGCCTTCAGGGGTCCAGTaGTCTTTAGGCACTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: LWNGCSLYYFTTHKIESKPSGVQ*SLGTSA Trigger: TGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGG...CTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | CTCCAAACCACATACATGACTGCCACTTTAAACAGACCGAATTTCAAACATGCATGGCGAACCCAACAATaGTATGTCCTTCAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LQTTYMTATLNRPNFKHAWRTQQ*YVLQGS Trigger: GGACCCCTGAAGGACATAGCATTGTTGGGTTCGCCA...TGCATGTTTGAAATTCGGTCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026318.15 |
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| CDS-3UTR CCA 90 bp | GAGCCTCCATCCCTCTTCACTGGACAGATCCGAAGCACCTCTTCTTTTGTAGAACCAAAGCCATCCTCTTaGAGATCTTTCTCAGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: EPPSLFTGQIRSTSSFVEPKPSS*RSFSVK Trigger: TTTAACTGAGAAAGATCTCCAAGAGGATGGCTTTGG...TTCTACAAAAGAAGAGGTGCTTCGGATCTGTCCAGTGAAGAGGGATGGAGGCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | ACAACGTCACTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTCCAAGAAGTGCATACTaGTGCAGCGACACTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: TTSLVIKLWNGCSLYYFTPRSAY*CSDTSW Trigger: CCATGAAGTGTCGCTGCAGCAGTATGCACTTCTTGG...AGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | CTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGTCTGCTACCAAGAAGTaGATACTGCTGCAGCGACAC | + |
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Preference number: 4 (lower is better) Translates to: LVIKLWNGCSLYYFTTHKSATKK*ILLQRH Trigger: GTGTCGCTGCAGCAGTATGCACTTCTTGGTAGCAGA...CTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | AAAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACCTTCAGGGGTCCAGTaGTCTTTAGGCACTTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: KRCSRILPPNHIHDCHFKPSGVQ*SLGTSA Trigger: TGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGG...TTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | ACCACCTTGTTCTTCATCAAAAGATGTTCAAGAATTCTGCCTCCAAACCACATACCAAGAAGTGCATACTaGTGCAGCGACACTTCATGG | + |
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Preference number: 4 (lower is better) Translates to: TTLFFIKRCSRILPPNHIPRSAY*CSDTSW Trigger: CCATGAAGTGTCGCTGCAGCAGTATGCACTTCTTGG...TATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTTGATGAAGAACAAGGTGGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026318.15 |
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| CDS-3UTR CCA 90 bp | CTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGTGCAGCGACACTTCATaGCAACCTGGCTTAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: LVIKLWNGCSLYYFTTHKCSDTS*QPGLDS Trigger: AGAATCTAAGCCAGGTTGCCATGAAGTGTCGCTGCA...CTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR TCA 90 bp | AACAACGTCACTGGTAATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACACTCTTTGTCAATCTTaGAGAGCCTCCATCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NNVTGNKALEWVLALLFHTLCQS*RASIPL Trigger: AAGAGGGATGGAGGCTCTTCAAGATTGACAAAGAGT...GTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATTACCAGTGACGTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | CTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGCTGAGAATTCTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LALLFHYTQDRKQGKLRILFRHF*NQAVVE Trigger: TTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAG...AATTCTCAGCTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR CCA 90 bp | CAAGATAGAAAGCAAGGGAAGCTGAGAATTATTCTAAAGCACAATGGAGGTTGTTGCAGCGACACTTCATaGCAACCTGGCTTAGATTCT | + |
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Preference number: 4 (lower is better) Translates to: QDRKQGKLRIILKHNGGCCSDTS*QPGLDS Trigger: AGAATCTAAGCCAGGTTGCCATGAAGTGTCGCTGCA...ACAACCTCCATTGTGCTTTAGAATAATTCTCAGCTTCCCTTGCTTTCTATCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR GCA 90 bp | AATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGACTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: NKALEWVLALLFHYTQDRLFRHF*NQAVVE Trigger: TTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAG...TCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR GCA 90 bp | ATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGAAGTGCATACTGCTaGAGCGACACTTCATGGCAA | + |
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Preference number: 4 (lower is better) Translates to: IKLWNGCSLYYFTTHKIERSAYC*SDTSWQ Trigger: TTGCCATGAAGTGTCGCTGCAGCAGTATGCACTTCT...TTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR TCA 90 bp | AATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAACTCTTTGTCAATCTTaGAGAGCCTCCATCCCTCTT | + |
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Preference number: 4 (lower is better) Translates to: NKALEWVLALLFHYTQDRTLCQS*RASIPL Trigger: AAGAGGGATGGAGGCTCTTCAAGATTGACAAAGAGT...TCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR CCA 90 bp | TGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACAGACCCACTTCATGGCAACCTaGCTTAGATTCTTCAAAATT | + |
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Preference number: 4 (lower is better) Translates to: CSRILPPNHIHDCHFKQTHFMAT*LRFFKI Trigger: AATTTTGAAGAATCTAAGCCAGGTTGCCATGAAGTG...GGTCTGTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026318.15 |
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| CDS-3UTR CCA 90 bp | GTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGAAGCTGAGACACTTCATGGCAACCTaGCTTAGATTCTTCAAAATT | + |
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Preference number: 4 (lower is better) Translates to: VLALLFHYTQDRKQGKLRHFMAT*LRFFKI Trigger: AATTTTGAAGAATCTAAGCCAGGTTGCCATGAAGTG...TCTCAGCTTCCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR CCA 90 bp | AAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTAAACCCAAAGCCATCCTCTTaGAGATCTTTCTCAGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: KDVQEFCLQTTYMTATLNPKPSS*RSFSVK Trigger: TTTAACTGAGAAAGATCTCCAAGAGGATGGCTTTGG...GTTTAAAGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000152463.8 |
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| CDS-3UTR CCA 90 bp | AATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGACCAAAGCCATCCTCTTaGAGATCTTTCTCAGTTAAA | + |
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Preference number: 4 (lower is better) Translates to: NKALEWVLALLFHYTQDRPKPSS*RSFSVK Trigger: TTTAACTGAGAAAGATCTCCAAGAGGATGGCTTTGG...TCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS GCA 90 bp | CTAGAGACTGTAACCTTCAGGGGTCCAGTGCTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAAGGGGTGTTCTCCAAAGCCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: LETVTFRGPVLFRHF*NQAVVEGVFSKAIL Trigger: GAGGATGGCTTTGGAGAACACCCCTTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGGTTACAGTCTCTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| CDS GCA 90 bp | AACAATGCTATGTCCTTCAGGGGTCCAGTGCTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAAGGGGTGTTCTCCAAAGCCATCCTC | + |
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Preference number: 5 (lower is better) Translates to: NNAMSFRGPVLFRHF*NQAVVEGVFSKAIL Trigger: GAGGATGGCTTTGGAGAACACCCCTTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGGACATAGCATTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR CAA 90 bp | GCATACTGCTGCAGCGACACTTCATGGCAACCTGGCTTAGATTCTTCAAAATTTTATTTAGCCAGTTCCTaGATCAGTCGCAGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: AYCCSDTSWQPGLDSSKFYLASS*ISRRMS Trigger: TGACATCCTGCGACTGATCAAGGAACTGGCTAAATA...AAATTTTGAAGAATCTAAGCCAGGTTGCCATGAAGTGTCGCTGCAGCAGTATGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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| CDS-3UTR CAA 90 bp | TTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGGGTACTCTTTGTCAATCTaGAAGAGCCTCCATCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: LEWVLALLFHYTQDRKQGYSLSI*KSLHPS Trigger: AGAGGGATGGAGGCTCTTCAAGATTGACAAAGAGTA...CCCTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS-3UTR CAA 90 bp | CTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGCAAGTATTTAGCCAGTTCCTaGATCAGTCGCAGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: LWNGCSLYYFTTHKIESKYLASS*ISRRMS Trigger: TGACATCCTGCGACTGATCAAGGAACTGGCTAAATA...CTTGCTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR CAA 90 bp | AATAAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGATATTTAGCCAGTTCCTaGATCAGTCGCAGGATGTCA | + |
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Preference number: 5 (lower is better) Translates to: NKALEWVLALLFHYTQDRYLASS*ISRRMS Trigger: TGACATCCTGCGACTGATCAAGGAACTGGCTAAATA...TCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTTATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 ENSMUST00000152463.8 |
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| CDS-3UTR CAA 90 bp | TCATCAAAAGATGTTCAAGAATTCTGCCTCCAAACCACATACATGACTGCCACTTTTAGCAAGTACTCTTaGTCAATCTTGAAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: SSKDVQEFCLQTTYMTATFSKYS*SILKSL Trigger: GAGGCTCTTCAAGATTGACAAAGAGTACTTGCTAAA...AGTGGCAGTCATGTATGTGGTTTGGAGGCAGAATTCTTGAACATCTTTTGATGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026318.15 |
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| CDS-3UTR CAA 90 bp | ATAGTAAGATCATACCACCTTGTTCTTCATCAAAAGATGTTCAAGAATTCTGCCTACTCTTTGTCAATCTaGAAGAGCCTCCATCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: IVRSYHLVLHQKMFKNSAYSLSI*KSLHPS Trigger: AGAGGGATGGAGGCTCTTCAAGATTGACAAAGAGTA...GGCAGAATTCTTGAACATCTTTTGATGAAGAACAAGGTGGTATGATCTTACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026318.15 |
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| CDS-3UTR CAA 90 bp | AAAGCTTTGGAATGGGTGCTCGCTCTATTATTTCACTACACACAAGATAGAAAGTTTAGCAAGTACTCTTaGTCAATCTTGAAGAGCCTC | + |
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Preference number: 5 (lower is better) Translates to: KALEWVLALLFHYTQDRKFSKYS*SILKSL Trigger: GAGGCTCTTCAAGATTGACAAAGAGTACTTGCTAAA...CTTTCTATCTTGTGTGTAGTGAAATAATAGAGCGAGCACCCATTCCAAAGCTTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS GCA 72 bp | ATGTCCTTCAGGGGTCCAGTGCTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAAGGGGTGTTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: MSFRGPVLFRHF*NQAVVEGVFSK Trigger: TTTGGAGAACACCCCTTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026318.15 ENSMUST00000112551.4 |
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| CDS GCA 72 bp | GTAACCTTCAGGGGTCCAGTGCTCTTTAGGCACTTCTaGAACCAGGCAGTGGTAGAAGGGGTGTTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VTFRGPVLFRHF*NQAVVEGVFSK Trigger: TTTGGAGAACACCCCTTCTACCACTGCCTGGTTGCAGAAGTGCCTAAAGAGCACTGGACCCCTGAAGGTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152463.8 |
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