Pregenerated sensors for SASS6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027959Ensembl transcript IDs: ENSMUST00000029571.13, ENSMUST00000197335.2, ENSMUST00000198311.5
Found 128 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCCAGGGAAGTAGGCTGAAGACGAGGAGGGGAGAACGGTGGGTTTaGAAGATAGCTGGAACGCTCCCAGCATGCCGTCTTTCTGATGGT | + |
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Preference number: 1 (lower is better) Translates to: AQGSRLKTRRGERWV*KIAGTLPACRLSDG Trigger: ACCATCAGAAAGACGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCCCCTCCTCGTCTTCAGCCTACTTCCCTGGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 90 bp | GTAACTGCCCAGGGAAGTAGGCTGAAGACGAGGAGGGGAGAACGGTaGGTTTGGAAGATAGCTGGAACGCTCCCAGCATGCCGTCTTTCT | + |
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Preference number: 1 (lower is better) Translates to: VTAQGSRLKTRRGER*VWKIAGTLPACRLS Trigger: AGAAAGACGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCCCCTCCTCGTCTTCAGCCTACTTCCCTGGGCAGTTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 90 bp | AGGGTTTCCAGTTCCTTTTTCTGTTGCTCGTGCTGCTGTTGGCACTaGACTTGGGTCTGCAAGGCCTTCTCCTTCTCAGCTGTTAACTCC | + |
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Preference number: 1 (lower is better) Translates to: RVSSSFFCCSCCCWH*TWVCKAFSFSAVNS Trigger: GGAGTTAACAGCTGAGAAGGAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTGGAAACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 90 bp | ATTGGGAGAGAGCCCACTTCTGATGGTGCTGTTGCTAGTAGAATGTaGGGTGGCAGAGGTTCCCAATGTGTCCTGTTTTCTTACCAGCTG | + |
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Preference number: 1 (lower is better) Translates to: IGREPTSDGAVASRM*GGRGSQCVLFSYQL Trigger: CAGCTGGTAAGAAAACAGGACACATTGGGAACCTCTGCCACCCCACATTCTACTAGCAACAGCACCATCAGAAGTGGGCTCTCTCCCAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 90 bp | AAAAGCAGAAGAGGTAGAGCAGAGAGTTGGCGCTATCTGTGTGTGTaGACACTTAGCACAGAGACAGGTCACCAACACCCTGCGTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: KSRRGRAESWRYLCV*TLSTETGHQHPAWK Trigger: TTTCCACGCAGGGTGTTGGTGACCTGTCTCTGTGCTAAGTGTCCACACACACAGATAGCGCCAACTCTCTGCTCTACCTCTTCTGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 90 bp | GCCTCTAACTCGGACAATCTGCTTTGTAGCTGGTGGATATTCCGTTaGTGGAGGGTTTCCAGTTCCTTTTTCTGTTGCTCGTGCTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: ASNSDNLLCSWWIFR*WRVSSSFFCCSCCC Trigger: ACAGCAGCACGAGCAACAGAAAAAGGAACTGGAAACCCTCCATCAACGGAATATCCACCAGCTACAAAGCAGATTGTCCGAGTTAGAGGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 90 bp | TGCCCATCTATCGAAGCGCTTGGTTTTGTAAGCTGCAGGTTAAAGTaGACCTTTGGTCCAGAGATAGGGTGGCTGGTGTTTTTGGCAGCT | + |
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Preference number: 1 (lower is better) Translates to: CPSIEALGFVSCRLK*TFGPEIGWLVFLAA Trigger: AGCTGCCAAAAACACCAGCCACCCTATCTCTGGACCAAAGGTTCACTTTAACCTGCAGCTTACAAAACCAAGCGCTTCGATAGATGGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 90 bp | AGCAGGAACCTTGGAGTCTCTTTCGCGTGTTCTTGCATACACTGCTaGAGGAGGTCTATAAACTTCTGTGGGAAAGCTAAGAAGTCCACC | + |
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Preference number: 1 (lower is better) Translates to: SRNLGVSFACSCIHC*RRSINFCGKAKKST Trigger: GGTGGACTTCTTAGCTTTCCCACAGAAGTTTATAGACCTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAGACTCCAAGGTTCCTGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR GCA 90 bp | TTTTCCTTATCATTTGAACAAGGCCTGTTAACAGCGGCTCCCGGCTaGCCATCTATCGAAGCGCTTGGTTTTGTAAGCTGCAGGTTAAAG | + |
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Preference number: 1 (lower is better) Translates to: FSLSFEQGLLTAAPG*PSIEALGFVSCRLK Trigger: CTTTAACCTGCAGCTTACAAAACCAAGCGCTTCGATAGATGGGCAGCCGGGAGCCGCTGTTAACAGGCCTTGTTCAAATGATAAGGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR GCA 90 bp | TGTTCCTGTAATCTGCATACCTCTTGCTCTTTGGCACGAAGAAACTaGCCAGCGTCCTGTGATTCCTTTCGCTCCTTTTGTAGCATTTCT | + |
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Preference number: 1 (lower is better) Translates to: CSCNLHTSCSLARRN*PASCDSFRSFCSIS Trigger: AGAAATGCTACAAAAGGAGCGAAAGGAATCACAGGACGCTGGGCAGTTTCTTCGTGCCAAAGAGCAAGAGGTATGCAGATTACAGGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 90 bp | CACAAAACAATTTCAGACAAAAGCAGAAGAGGTAGAGCAGAGAGTTaGCGCTATCTGTGTGTGTGGACACTTAGCACAGAGACAGGTCAC | + |
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Preference number: 1 (lower is better) Translates to: HKTISDKSRRGRAES*RYLCVWTLSTETGH Trigger: GTGACCTGTCTCTGTGCTAAGTGTCCACACACACAGATAGCGCCAACTCTCTGCTCTACCTCTTCTGCTTTTGTCTGAAATTGTTTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 90 bp | ATAGCAATATTCTTCCCATCACTGAACTGTGATAACAGCCCTCGTTaGAGACAGCTAGCAATAGCCATCATCCTGAAAGTGAGGCTAAAG | + |
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Preference number: 1 (lower is better) Translates to: IAIFFPSLNCDNSPR*RQLAIAIILKVRLK Trigger: CTTTAGCCTCACTTTCAGGATGATGGCTATTGCTAGCTGTCTTCAACGAGGGCTGTTATCACAGTTCAGTGATGGGAAGAATATTGCTAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 90 bp | ACGGCCACTTTTGTTTGTAGCTGGTTGATGTGCTTTTCTTTCTCGTaGCATTCAGTATCCAGAGTACAATTCTCTCTTCTCAGAGAAAGG | + |
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Preference number: 1 (lower is better) Translates to: TATFVCSWLMCFSFS*HSVSRVQFSLLRER Trigger: CCTTTCTCTGAGAAGAGAGAATTGTACTCTGGATACTGAATGCCACGAGAAAGAAAAGCACATCAACCAGCTACAAACAAAAGTGGCCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR GCA 90 bp | TACAACAGTCCTGTGCTGCATAGAGAGACTTCTTTCCAGAATAAGTaGTTTCAAGTAGTTATAGCAATATTCTTCCCATCACTGAACTGT | + |
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Preference number: 1 (lower is better) Translates to: YNSPVLHRETSFQNK*FQVVIAIFFPSLNC Trigger: ACAGTTCAGTGATGGGAAGAATATTGCTATAACTACTTGAAAGCACTTATTCTGGAAAGAAGTCTCTCTATGCAGCACAGGACTGTTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 90 bp | GCTTTAGTCCTAGGTCTTGGGACACAGAGGCAGGTGGATCTGGGTTaGAGGCCAGCCTGGTCTACATACATAGCCAGTTCCAGGACAGCT | + |
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Preference number: 2 (lower is better) Translates to: ALVLGLGTQRQVDLG*RPAWSTYIASSRTA Trigger: AGCTGTCCTGGAACTGGCTATGTATGTAGACCAGGCTGGCCTCAAACCCAGATCCACCTGCCTCTGTGTCCCAAGACCTAGGACTAAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 90 bp | TTGATGGAGGGTTTCCAGTTCCTTTTTCTGTTGCTCGTGCTGCTGTaGGCACTGAACTTGGGTCTGCAAGGCCTTCTCCTTCTCAGCTGT | + |
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Preference number: 2 (lower is better) Translates to: LMEGFQFLFLLLVLL*ALNLGLQGLLLLSC Trigger: ACAGCTGAGAAGGAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTGGAAACCCTCCATCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 90 bp | CTGGTGGATATTCCGTTGATGGAGGGTTTCCAGTTCCTTTTTCTGTaGCTCGTGCTGCTGTTGGCACTGAACTTGGGTCTGCAAGGCCTT | + |
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Preference number: 2 (lower is better) Translates to: LVDIPLMEGFQFLFL*LVLLLALNLGLQGL Trigger: AAGGCCTTGCAGACCCAAGTTCAGTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTGGAAACCCTCCATCAACGGAATATCCACCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 90 bp | TCAACCACATTCAGATTGGGAGAGAGCCCACTTCTGATGGTGCTGTaGCTAGTAGAATGTGGGGTGGCAGAGGTTCCCAATGTGTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: STTFRLGESPLLMVL*LVECGVAEVPNVSC Trigger: ACAGGACACATTGGGAACCTCTGCCACCCCACATTCTACTAGCAACAGCACCATCAGAAGTGGGCTCTCTCCCAATCTGAATGTGGTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR GCA 90 bp | AACTCACTCTGTAGACCAGGCTGGCCTCCAACTCAGAAATCCGCCTGCCTCTGCCTAACTCGGACAATCTaGTTTGTAGCTGGTGGATAT | + |
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Preference number: 2 (lower is better) Translates to: NSLCRPGWPPTQKSACLCLTRTI*FVAGGY Trigger: ATATCCACCAGCTACAAAGCAGATTGTCCGAGTTAG...GCAGAGGCAGGCGGATTTCTGAGTTGGAGGCCAGCCTGGTCTACAGAGTGAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTCTGCAGCAGGAACCTTaGAGTCTCTTTCGCGTGTTC | + |
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Preference number: 2 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFLQQEP*SLFRVF Trigger: GAACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAG...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGAGTACAATTCTCTCTTCTCAGAGAAAGGACCTCTTGCTTGGCCCGCTGCATCAGCTGTTAACTCCTaGGAGTGCTTATTCGTCAGC | + |
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Preference number: 2 (lower is better) Translates to: PEYNSLFSEKGPLAWPAASAVNS*ECLFVS Trigger: GCTGACGAATAAGCACTCTCAGGAGTTAACAGCTGA...TGCAGCGGGCCAAGCAAGAGGTCCTTTCTCTGAGAAGAGAGAATTGTACTCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 90 bp | TCTGGAATGTCAATGCAGAGGAGACAGGATAGCCAATTCCACAGCTaGGGTAATTTAGTCTATCAACCACATTCAGATTGGGAGAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: SGMSMQRRQDSQFHS*GNLVYQPHSDWERA Trigger: GGCTCTCTCCCAATCTGAATGTGGTTGATAGACTAAATTACCCAAGCTGTGGAATTGGCTATCCTGTCTCCTCTGCATTGACATTCCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCATCATCCTGAAAGTGAGGCTAAAGATTCTACGTCACTGTCTCAAAATGGTAACTCAGGCTTGGTaGGTACACAGCTTTAGTCCT | + |
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Preference number: 2 (lower is better) Translates to: IAIILKVRLKILRHCLKMVTQAW*VHSFSP Trigger: AGGACTAAAGCTGTGTACCCACCAAGCCTGAGTTAC...CATTTTGAGACAGTGACGTAGAATCTTTAGCCTCACTTTCAGGATGATGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGCGTCCTGTGATTCCTTTCGCTCCTTTTGTAGCATTTCTTCTTTCTCAACTTTTGTTTGTAGCTaGTTGATGTGCTTTTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: CPASCDSFRSFCSISSFSTFVCS*LMCFSF Trigger: GAAAGAAAAGCACATCAACCAGCTACAAACAAAAGT...TGAGAAAGAAGAAATGCTACAAAAGGAGCGAAAGGAATCACAGGACGCTGGGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCATCATCCTGAAAGTGAGGCTAAAGATTCTACGTCACTGTCTCAAAATGGAACATAAAATTGGGTaGGTAGGAAACTGGAGACCA | + |
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Preference number: 2 (lower is better) Translates to: IAIILKVRLKILRHCLKMEHKIG*VGNWRP Trigger: TGGTCTCCAGTTTCCTACCCACCCAATTTTATGTTC...CATTTTGAGACAGTGACGTAGAATCTTTAGCCTCACTTTCAGGATGATGGCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CCA 90 bp | ATAGCCATCATCCTGAAAGTGAGGCTAAAGATTCTACGTCACTGTCTCAAAATGTGCTTTTCTTTCTCGTaGCATTCAGTATCCAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: IAIILKVRLKILRHCLKMCFSFS*HSVSRV Trigger: TACTCTGGATACTGAATGCCACGAGAAAGAAAAGCA...CATTTTGAGACAGTGACGTAGAATCTTTAGCCTCACTTTCAGGATGATGGCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | CAGGGAAGTAGGCTGAAGACGAGGAGGGGAGAACGGTaGGTTTGGAAGATAGCTGGAACGCTCCCAGCATGC | + |
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Preference number: 3 (lower is better) Translates to: QGSRLKTRRGER*VWKIAGTLPAC Trigger: GCATGCTGGGAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCCCCTCCTCGTCTTCAGCCTACTTCCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | AGTAGGCTGAAGACGAGGAGGGGAGAACGGTGGGTTTaGAAGATAGCTGGAACGCTCCCAGCATGCCGTCTT | + |
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Preference number: 3 (lower is better) Translates to: SRLKTRRGERWV*KIAGTLPACRL Trigger: AAGACGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCCCCTCCTCGTCTTCAGCCTACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | CAGGCTTGGTGGGTACACAGCTTTAGTCCTAGGTCTTaGGACACAGAGGCAGGTGGATCTGGGTTTGAGGCC | + |
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Preference number: 3 (lower is better) Translates to: QAWWVHSFSPRS*DTEAGGSGFEA Trigger: GGCCTCAAACCCAGATCCACCTGCCTCTGTGTCCCAAGACCTAGGACTAAAGCTGTGTACCCACCAAGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | TACAATTCTCTCTTCTCAGAGAAAGGACCTCTTGCTTaGCCCGCTGCAGCTCCTCTTCCACGCCAGCCAGCT | + |
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Preference number: 3 (lower is better) Translates to: YNSLFSEKGPLA*PAAAPLPRQPA Trigger: AGCTGGCTGGCGTGGAAGAGGAGCTGCAGCGGGCCAAGCAAGAGGTCCTTTCTCTGAGAAGAGAGAATTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | GTCTGCAAGGCCTTCTCCTTCTCAGCTGTTAACTCCTaGGAGTGCTTATTCGTCAGCGATGCTGTGTGCGAG | + |
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Preference number: 3 (lower is better) Translates to: VCKAFSFSAVNS*ECLFVSDAVCE Trigger: CTCGCACACAGCATCGCTGACGAATAAGCACTCTCAGGAGTTAACAGCTGAGAAGGAGAAGGCCTTGCAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR GCA 72 bp | CGGTGGGTTTGGAAGATAGCTGGAACGCTCCCAGCATaGCGTCTTTCTGATGGTCTGAGTCACTCAACAGAT | + |
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Preference number: 3 (lower is better) Translates to: RWVWKIAGTLPA*RLSDGLSHSTD Trigger: ATCTGTTGAGTGACTCAGACCATCAGAAAGACGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACCCACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | AGAGGTAGAGCAGAGAGTTGGCGCTATCTGTGTGTGTaGACACTTAGCACAGAGACAGGTCACCAACACCCT | + |
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Preference number: 3 (lower is better) Translates to: RGRAESWRYLCV*TLSTETGHQHP Trigger: AGGGTGTTGGTGACCTGTCTCTGTGCTAAGTGTCCACACACACAGATAGCGCCAACTCTCTGCTCTACCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | AGTTCCTTTTTCTGTTGCTCGTGCTGCTGTTGGCACTaGACTTGGGTCTGCAAGGCCTTCTCCTTCTCAGCT | + |
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Preference number: 3 (lower is better) Translates to: SSFFCCSCCCWH*TWVCKAFSFSA Trigger: AGCTGAGAAGGAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | GAGCCCACTTCTGATGGTGCTGTTGCTAGTAGAATGTaGGGTGGCAGAGGTTCCCAATGTGTCCTGTTTTCT | + |
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Preference number: 3 (lower is better) Translates to: EPTSDGAVASRM*GGRGSQCVLFS Trigger: AGAAAACAGGACACATTGGGAACCTCTGCCACCCCACATTCTACTAGCAACAGCACCATCAGAAGTGGGCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CAA 90 bp | GAGTCTCCTTTATACTTCCTCTCGGTGAGCTCTTTATTAGCTGCCTCTAACTCGCTGTTGGCACTGAACTaGGGTCTGCAAGGCCTTCTC | + |
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Preference number: 3 (lower is better) Translates to: ESPLYFLSVSSLLAASNSLLALN*GLQGLL Trigger: GAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAG...CGAGTTAGAGGCAGCTAATAAAGAGCTCACCGAGAGGAAGTATAAAGGAGACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | ACATGCATGCCTGATGCACTCTGGGTGACAAAATTGTaGGCTGTCATGTGGGTGCTGGGATTAGAACCCACA | + |
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Preference number: 3 (lower is better) Translates to: TCMPDALWVTKL*AVMWVLGLEPT Trigger: TGTGGGTTCTAATCCCAGCACCCACATGACAGCTCACAATTTTGTCACCCAGAGTGCATCAGGCATGCATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR GCA 72 bp | AATCTGCATACCTCTTGCTCTTTGGCACGAAGAAACTaGCCAGCGTCCTGTGATTCCTTTCGCTCCTTTTGT | + |
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Preference number: 3 (lower is better) Translates to: NLHTSCSLARRN*PASCDSFRSFC Trigger: ACAAAAGGAGCGAAAGGAATCACAGGACGCTGGGCAGTTTCTTCGTGCCAAAGAGCAAGAGGTATGCAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CAA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCGCTGCAGCAGGAACCTaGGAGTCTCTTTCGCGTGTT | + |
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Preference number: 3 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSAAAGT*ESLSRV Trigger: AACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAGC...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | TCGGACAATCTGCTTTGTAGCTGGTGGATATTCCGTTaGTGGAGGGTTTCCAGTTCCTTTTTCTGTTGCTCG | + |
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Preference number: 3 (lower is better) Translates to: SDNLLCSWWIFR*WRVSSSFFCCS Trigger: CGAGCAACAGAAAAAGGAACTGGAAACCCTCCATCAACGGAATATCCACCAGCTACAAAGCAGATTGTCCGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | GAGATAGGGTGGCTGGTGTTTTTGGCAGCTACTACATaGGGAAAAGCATTCTGGAATGTCAATGCAGAGGAG | + |
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Preference number: 3 (lower is better) Translates to: EIGWLVFLAATT*GKAFWNVNAEE Trigger: CTCCTCTGCATTGACATTCCAGAATGCTTTTCCTCATGTAGTAGCTGCCAAAAACACCAGCCACCCTATCTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | GAATGTAAAGTCAATGTAAGGCTCAATGGTCACAGGTaGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGA | + |
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Preference number: 3 (lower is better) Translates to: ECKVNVRLNGHR*KLSQLSGGRLR Trigger: TCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAGCCTTACATTGACTTTACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029571.13 ENSMUST00000197335.2 |
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| 3UTR CCA 72 bp | ATTTCAGACAAAAGCAGAAGAGGTAGAGCAGAGAGTTaGCGCTATCTGTGTGTGTGGACACTTAGCACAGAG | + |
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Preference number: 3 (lower is better) Translates to: ISDKSRRGRAES*RYLCVWTLSTE Trigger: CTCTGTGCTAAGTGTCCACACACACAGATAGCGCCAACTCTCTGCTCTACCTCTTCTGCTTTTGTCTGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | CTTGGAGTCTCTTTCGCGTGTTCTTGCATACACTGCTaGAGGAGGTCTATAAACTTCTGTGGGAAAGCTAAG | + |
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Preference number: 3 (lower is better) Translates to: LGVSFACSCIHC*RRSINFCGKAK Trigger: CTTAGCTTTCCCACAGAAGTTTATAGACCTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAGACTCCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR TCA 72 bp | TTCTTCCCATCACTGAACTGTGATAACAGCCCTCGTTaGAGACAGCTAGCAATAGCCATCATCCTGAAAGTG | + |
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Preference number: 3 (lower is better) Translates to: FFPSLNCDNSPR*RQLAIAIILKV Trigger: CACTTTCAGGATGATGGCTATTGCTAGCTGTCTTCAACGAGGGCTGTTATCACAGTTCAGTGATGGGAAGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CAA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCACTCTTTCGCGTGTTCTaGCATACACTGCTGAAGGAG | + |
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Preference number: 3 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPLFRVF*HTLLKE Trigger: CTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAG...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CAA 90 bp | TGCCCAGCGTCCTGTGATTCCTTTCGCTCCTTTTGTAGCATTTCTTCTTTCTCATATCGAATGCTTCTTTaGTTCTCAGAACAAGCTGGT | + |
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Preference number: 3 (lower is better) Translates to: CPASCDSFRSFCSISSFSYRMLL*FSEQAG Trigger: ACCAGCTTGTTCTGAGAACAAAAGAAGCATTCGATA...TGAGAAAGAAGAAATGCTACAAAAGGAGCGAAAGGAATCACAGGACGCTGGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR-3UTR CAA 90 bp | GTGGCTGGTGTTTTTGGCAGCTACTACATGAGGAAAAGCATTCTGGAATGTCAATTTGTTTGTAGCTGGTaGATGTGCTTTTCTTTCTCG | + |
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Preference number: 3 (lower is better) Translates to: VAGVFGSYYMRKSILECQFVCSW*MCFSFS Trigger: CGAGAAAGAAAAGCACATCAACCAGCTACAAACAAA...TTGACATTCCAGAATGCTTTTCCTCATGTAGTAGCTGCCAAAAACACCAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CCA 72 bp | TTTGTTTGTAGCTGGTTGATGTGCTTTTCTTTCTCGTaGCATTCAGTATCCAGAGTACAATTCTCTCTTCTC | + |
|
Preference number: 3 (lower is better) Translates to: FVCSWLMCFSFS*HSVSRVQFSLL Trigger: GAGAAGAGAGAATTGTACTCTGGATACTGAATGCCACGAGAAAGAAAAGCACATCAACCAGCTACAAACAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| 3UTR CCA 72 bp | AGGGAGAAAGAACATAAAATTGGGTGGGTAGGAAACTaGAGACCATCTGGGAGGAGAAATTATAAACCAAAT | + |
|
Preference number: 3 (lower is better) Translates to: REKEHKIGWVGN*RPSGRRNYKPN Trigger: ATTTGGTTTATAATTTCTCCTCCCAGATGGTCTCCAGTTTCCTACCCACCCAATTTTATGTTCTTTCTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| 3UTR TCA 72 bp | TCTACATCATTTCCAGGTAAAAGCTTTAGTGACAGGTaGATAAGATGCTTAAAAGGATTTGTCTCCACTACG | + |
|
Preference number: 3 (lower is better) Translates to: STSFPGKSFSDR*IRCLKGFVSTT Trigger: CGTAGTGGAGACAAATCCTTTTAAGCATCTTATTCACCTGTCACTAAAGCTTTTACCTGGAAATGATGTAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| 3UTR TCA 72 bp | TGTTATTACACTGATGATCTTTATGGAATGCCCAGATaGCTAAAGCACTTCAGTCATGTAAATACACTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: CYYTDDLYGMPR*LKHFSHVNTLS Trigger: GGACAGTGTATTTACATGACTGAAGTGCTTTAGTCATCTGGGCATTCCATAAAGATCATCAGTGTAATAACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTGGTTTGGAAGATAGCTaGAACGCTCCCAGCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFGLEDS*NAPSMP Trigger: CGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACC...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR CCA 90 bp | AATGTAAGGCTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGAGGTGGCTGGTGTTTTTaGCAGCTACTACATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: NVRLNGHRWKLSQLSGGRGGWCF*QLLHEE Trigger: TTCCTCATGTAGTAGCTGCCAAAAACACCAGCCACC...TCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAGCCTTACATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| 3UTR CAA 72 bp | GGTTTCCAGTTCCTTTTTCTGTTGCTCGTGCTGCTGTaGGCACTGAACTTGGGTCTGCAAGGCCTTCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFQFLFLLLVLL*ALNLGLQGLLL Trigger: AAGGAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTGGAAACC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| 3UTR CAA 72 bp | TTCAGATTGGGAGAGAGCCCACTTCTGATGGTGCTGTaGCTAGTAGAATGTGGGGTGGCAGAGGTTCCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: FRLGESPLLMVL*LVECGVAEVPN Trigger: ATTGGGAACCTCTGCCACCCCACATTCTACTAGCAACAGCACCATCAGAAGTGGGCTCTCTCCCAATCTGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR TCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTAGCATGCCGTCTTTCTaGTGGTCTGAGTCACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFSMPSF*WSESLN Trigger: GTTGAGTGACTCAGACCATCAGAAAGACGGCATGCT...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR TCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTTCAGCTGTTAACTCCTaGGAGTGCTTATTCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFSAVNS*ECLFVS Trigger: GCTGACGAATAAGCACTCTCAGGAGTTAACAGCTGA...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR TCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCCCAGGGAAGTAGGCTaGAGACGAGGAGGGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSPREVG*RRGGEN Trigger: GTTCTCCCCTCCTCGTCTTCAGCCTACTTCCCTGGG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR TCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCACCCAGGGAAGTAGGCTaGAGACGAGGAGGGGAGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPPREVG*RRGGEN Trigger: GTTCTCCCCTCCTCGTCTTCAGCCTACTTCCCTGGG...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTCTGCCAACTACAAGATaGTTGCATGTGCTCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFLPTTR*LHVLWE Trigger: TTCCCAGAGCACATGCAAGCATCTTGTAGTTGGCAG...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTATACCTCTTGCTCTTTaGCACGAAGAAACTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFIPLAL*HEETAQ Trigger: CTGGGCAGTTTCTTCGTGCCAAAGAGCAAGAGGTAT...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| 3UTR CAA 72 bp | CTGCAGCAGGAACCTTGGAGTCTCTTTCGCGTGTTCTaGCATACACTGCTGAAGGAGGTCTATAAACTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LQQEPWSLFRVF*HTLLKEVYKLL Trigger: CAGAAGTTTATAGACCTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR GCA 90 bp | AATGTAAGGCTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATGTGTAATGTGCAGTTaGCTGGTAACATCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NVRLNGHRWKLSQLSGGRCVMCS*LVTSSS Trigger: ACTAGATGATGTTACCAGGCAACTGCACATTACACA...TCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAGCCTTACATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR TCA 90 bp | CAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTTTGTCTTTCTGATGGTCTaGGTCACTCAACAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: QWSQVEALPALRWQIKIFVFLMV*VTQQIL Trigger: CAGAATCTGTTGAGTGACTCAGACCATCAGAAAGAC...AAAAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR GCA 90 bp | CAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTTTCAACTACAAGATGCTTaGATGTGCTCTGGGAAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: QWSQVEALPALRWQIKIFQLQDA*MCSGKA Trigger: AGCTTTCCCAGAGCACATGCAAGCATCTTGTAGTTG...AAAAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR GCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTCTAACTCGGACAATCTaGTTTGTAGCTGGTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFLTRTI*FVAGGY Trigger: ATATCCACCAGCTACAAAGCAGATTGTCCGAGTTAG...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAGGAACGCTCCCAGCATaGCGTCTTTCTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPGTLPA*RLSDGL Trigger: CAGACCATCAGAAAGACGGCATGCTGGGAGCGTTCC...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTGTCCCTAAGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACGGAGAACGGTGGGTTTaGAAGATAGCTGGAACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: DKVSLSRPTGKNLIQSSDGERWV*KIAGTL Trigger: GAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCC...GTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCTTAGGGACACTTTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCACTGCAGCAGGAACCTTaGAGTCTCTTTCGCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPLQQEP*SLFRVF Trigger: GAACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAG...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR TCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCATCAGTCAGACGGATaGCTAAATCCTCTCCTCGCA | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSHQSDG*LNPLLA Trigger: TGCGAGGAGAGGATTTAGTCATCCGTCTGACTGATG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR CCA 90 bp | CAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTTTTGCTTTTCTTTCTCGTaGCATTCAGTATCCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: QWSQVEALPALRWQIKIFCFSFS*HSVSRV Trigger: TACTCTGGATACTGAATGCCACGAGAAAGAAAAGCA...AAAAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR CCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCGTTGCTAGTAGAATGTaGGGTGGCAGAGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSVASRM*GGRGSQ Trigger: TTGGGAACCTCTGCCACCCCACATTCTACTAGCAAC...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCAAGATGCTTGCATGTaGTCTGGGAAAGCTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSQDACM*SGKASC Trigger: ACAGGAAGCTTTCCCAGAGCACATGCAAGCATCTTG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR GCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGTTCCTTTTTCTGTTaGTCGTGCTGCTGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSSSFFC*SCCCWH Trigger: GTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACT...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGGAACGCTCCCAGCATaGCGTCTTTCTGATGGTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVGTLPA*RLSDGL Trigger: CAGACCATCAGAAAGACGGCATGCTGGGAGCGTTCC...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | ATAGCCATCATCCTGAAAGTGAGGCTAAAGATTCTACGTCACTGTCTCAAAATGAAGCTTCCTGTGTACTaGATTCGAAAGGGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: IAIILKVRLKILRHCLKMKLPVY*IRKGLQ Trigger: CTGCAGTCCCTTTCGAATCCAGTACACAGGAAGCTT...CATTTTGAGACAGTGACGTAGAATCTTTAGCCTCACTTTCAGGATGATGGCTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR CCA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTACTTTTGTTTGTAGCTaGTTGATGTGCTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFTFVCS*LMCFSF Trigger: GAAAGAAAAGCACATCAACCAGCTACAAACAAAAGT...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAGGTGGCTGGTGTTTTTaGCAGCTACTACATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPGGWCF*QLLHEE Trigger: TTCCTCATGTAGTAGCTGCCAAAAACACCAGCCACC...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGGTTTGGAAGATAGCTaGAACGCTCCCAGCATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVGLEDS*NAPSMP Trigger: CGGCATGCTGGGAGCGTTCCAGCTATCTTCCAAACC...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGGAGAACGGTGGGTTTaGAAGATAGCTGGAACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSGERWV*KIAGTL Trigger: GAGCGTTCCAGCTATCTTCCAAACCCACCGTTCTCC...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| 3UTR CAA 72 bp | TCAATGCAGAGGAGACAGGATAGCCAATTCCACAGCTaGGGTAATTTAGTCTATCAACCACATTCAGATTGG | + |
|
Preference number: 4 (lower is better) Translates to: SMQRRQDSQFHS*GNLVYQPHSDW Trigger: CCAATCTGAATGTGGTTGATAGACTAAATTACCCAAGCTGTGGAATTGGCTATCCTGTCTCCTCTGCATTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
||
| CDS-3UTR TCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGCTGCAGGTTAAAGTaGACCTTTGGTCCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSSCRLK*TFGPEI Trigger: TATCTCTGGACCAAAGGTTCACTTTAACCTGCAGCT...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTAGCATGCCGTCTTTCTaGTGGTCTGAGTCACTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSSMPSF*WSESLN Trigger: GTTGAGTGACTCAGACCATCAGAAAGACGGCATGCT...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR TCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCATCAGTCAGACGGATaGCTAAATCCTTCCTGTGTA | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSHQSDG*LNPSCV Trigger: TACACAGGAAGGATTTAGTCATCCGTCTGACTGATG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAATTCTGGAATGTCAATaGAGAGGAGACAGGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPILECQ*RGDRIA Trigger: GGCTATCCTGTCTCCTCTGCATTGACATTCCAGAAT...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTCTGCAGCAGGAACCTTaGAGTCTCTTTCGCGTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVLQQEP*SLFRVF Trigger: GAACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAG...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGCTAGTAGAATGTaGGGTGGCAGAGGTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSVASRM*GGRGSQ Trigger: TTGGGAACCTCTGCCACCCCACATTCTACTAGCAAC...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGGTCCAGAGATAGGGTaGCTGGTGTTTTTGGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVGPEIG*LVFLAA Trigger: AGCTGCCAAAAACACCAGCCACCCTATCTCTGGACC...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCATCACTCAACAGATTCTaGCTAAGTCCGCGTAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPSLNRF*LSPRKG Trigger: TCCTTTACGCGGACTTAGCCAGAATCTGTTGAGTGA...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR TCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTTCAGCTGTTAACTCCTaGGAGTGCTTATTCGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSSAVNS*ECLFVS Trigger: GCTGACGAATAAGCACTCTCAGGAGTTAACAGCTGA...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTAGTTCCTTTTTCTGTTaGTCGTGCTGCTGTTGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSSSFFC*SCCCWH Trigger: GTGCCAACAGCAGCACGAGCAACAGAAAAAGGAACT...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR GCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCTAACTCGGACAATCTaGTTTGTAGCTGGTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSLTRTI*FVAGGY Trigger: ATATCCACCAGCTACAAAGCAGATTGTCCGAGTTAG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
||
| CDS-3UTR CCA 90 bp | GATAAAGTGTCCCTAAGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACGTTCTCAGAACAAGCTaGTCTTTATCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DKVSLSRPTGKNLIQSSDVLRTS*SLSLIS Trigger: GGAGATCAAAGATAAAGACCAGCTTGTTCTGAGAAC...GTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCTTAGGGACACTTTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTATCCTTCCTGTGTACTaGATTCGAAAGGGACTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSILPVY*IRKGLQ Trigger: CTGCAGTCCCTTTCGAATCCAGTACACAGGAAGGAT...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000198311.5 |
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| CDS-3UTR GCA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCTGTGTAATGTGCAGTTaGCTGGTAACATCATCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSCVMCS*LVTSSS Trigger: ACTAGATGATGTTACCAGGCAACTGCACATTACACA...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR GCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAATTGTTCCTGTAATCTaGATACCTCTTGCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPIVPVI*IPLALW Trigger: CCAAAGAGCAAGAGGTATGCAGATTACAGGAACAAT...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR GCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTATTCTGGAATGTCAATaGAGAGGAGACAGGATAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSILECQ*RGDRIA Trigger: GGCTATCCTGTCTCCTCTGCATTGACATTCCAGAAT...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAGTTCTCAGAACAAGCTaGTCTTTATCTTTGATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPVLRTS*SLSLIS Trigger: GGAGATCAAAGATAAAGACCAGCTTGTTCTGAGAAC...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTATACCTCTTGCTCTTTaGCACGAAGAAACTGCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVIPLAL*HEETAQ Trigger: CTGGGCAGTTTCTTCGTGCCAAAGAGCAAGAGGTAT...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR TCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTAGCTGCAGGTTAAAGTaGACCTTTGGTCCAGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVSCRLK*TFGPEI Trigger: TATCTCTGGACCAAAGGTTCACTTTAACCTGCAGCT...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR TCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGTCTTTCTGATGGTCTaGGTCACTCAACAGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVVFLMV*VTQQIL Trigger: CAGAATCTGTTGAGTGACTCAGACCATCAGAAAGAC...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR GCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTTGTAGCTGGTTGATGTaGTTTTCTTTCTCGTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVCSWLM*FSFSWH Trigger: ATGCCACGAGAAAGAAAAGCACATCAACCAGCTACA...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CCA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTTGCTTTTCTTTCTCGTaGCATTCAGTATCCAGAGTA | + |
|
Preference number: 4 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSCFSFS*HSVSRV Trigger: TACTCTGGATACTGAATGCCACGAGAAAGAAAAGCA...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CCA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCAACTTTTGTTTGTAGCTaGTTGATGTGCTTTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPTFVCS*LMCFSF Trigger: GAAAGAAAAGCACATCAACCAGCTACAAACAAAAGT...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| 3UTR CAA 72 bp | TTCTTGCATATAAAACGCTCAAGCCTCAGTGCTTTATaGACAAAGGTCACAGCTTTCAGAAATAGCAAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FLHIKRSSLSAL*TKVTAFRNSKK Trigger: CTTTTTGCTATTTCTGAAAGCTGTGACCTTTGTCAATAAAGCACTGAGGCTTGAGCGTTTTATATGCAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| CDS-3UTR GCA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTATTGTTCCTGTAATCTaGATACCTCTTGCTCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVIVPVI*IPLALW Trigger: CCAAAGAGCAAGAGGTATGCAGATTACAGGAACAAT...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| 3UTR CAA 72 bp | TTACCCATCAGAGTTTTAAGATCTCCTTGTAACTTCTaGATGATCTCATTTGCCTTTAGAAGTTCTGCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPIRVLRSPCNF*MISFAFRSSAD Trigger: ATCAGCAGAACTTCTAAAGGCAAATGAGATCATCAAGAAGTTACAAGGAGATCTTAAAACTCTGATGGGTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| 3UTR CAA 72 bp | CGTAAAGGAATGCTAGCTTCTCTTCTCTTCAAGTATTaGGATTCCAATCCTAAAGTTTCACCATTTTCCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RKGMLASLLFKY*DSNPKVSPFSL Trigger: TAAGGAAAATGGTGAAACTTTAGGATTGGAATCCAAATACTTGAAGAGAAGAGAAGCTAGCATTCCTTTACG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| CDS-3UTR CAA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCTGTTGGCACTGAACTaGGGTCTGCAAGGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSLLALN*GLQGLL Trigger: GAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGTCCCTAAGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACCTCTCCTCGCAGTCTTaGCATTTCACTAGCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: DKVSLSRPTGKNLIQSSDLSSQS*HFTSKG Trigger: TCCCTTGCTAGTGAAATGCAAAGACTGCGAGGAGAG...GTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCTTAGGGACACTTTATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029571.13 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGTCCCTAAGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACCAGTTCCTTTTTCTGTaGCTCGTGCTGCTGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: DKVSLSRPTGKNLIQSSDQFLFL*LVLLLA Trigger: TGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTG...GTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCTTAGGGACACTTTATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTTTTGTTTGTAGCTGGTaGATGTGCTTTTCTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFFVCSW*MCFSFS Trigger: CGAGAAAGAAAAGCACATCAACCAGCTACAAACAAA...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
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| CDS-3UTR CAA 90 bp | CTCAATGGTCACAGGTGGAAGCTCTCCCAGCTCTCAGGTGGCAGATTAAGATTTAGCTGGTCTTTATCTTaGATCTCCTGTTCTAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: LNGHRWKLSQLSGGRLRFSWSLS*ISCSKT Trigger: CGTTTTAGAACAGGAGATCAAAGATAAAGACCAGCT...AAATCTTAATCTGCCACCTGAGAGCTGGGAGAGCTTCCACCTGTGACCATTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197335.2 |
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| CDS GCA 90 bp | AAACCAACAACGAGGCAAAACCTAAAGTTACTGCCAACTACAAGATaGTTGCATGTGCTCTGGGAAAGCTTCCTGTGTACTGGATTCGAA | + |
|
Preference number: 5 (lower is better) Translates to: KPTTRQNLKLLPTTR*LHVLWESFLCTGFE Trigger: TTCGAATCCAGTACACAGGAAGCTTTCCCAGAGCACATGCAAGCATCTTGTAGTTGGCAGTAACTTTAGGTTTTGCCTCGTTGTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| CDS-3UTR CAA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCTCTCCTCGCAGTCTTaGCATTTCACTAGCAAGGGA | + |
|
Preference number: 5 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSLSSQS*HFTSKG Trigger: TCCCTTGCTAGTGAAATGCAAAGACTGCGAGGAGAG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029571.13 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTCTGTTGGCACTGAACTaGGGTCTGCAAGGCCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSLLALN*GLQGLL Trigger: GAGAAGGCCTTGCAGACCCAAGTTCAGTGCCAACAG...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | CAAGTCTTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCCAGTTCCTTTTTCTGTaGCTCGTGCTGCTGTTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QVFSLYSLQVYLDKVSLSQFLFL*LVLLLA Trigger: TGCCAACAGCAGCACGAGCAACAGAAAAAGGAACTG...GCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAAGACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTGCTGCAGCAGGAACCTaGGAGTCTCTTTCGCGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVAAAGT*ESLSRV Trigger: AACACGCGAAAGAGACTCCAAGGTTCCTGCTGCAGC...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTCTCTTTCGCGTGTTCTaGCATACACTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSLFRVF*HTLLKE Trigger: CTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAG...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTTCAACCACATTCAGATaGGGAGAGAGCCCACTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSSTTFR*GESPLL Trigger: CAGAAGTGGGCTCTCTCCCAATCTGAATGTGGTTGA...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTGTTCTCTTTCGCGTGTTCTaGCATACACTGCTGAAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RPTGKNLIQSSDFLKHSVLFRVF*HTLLKE Trigger: CTCCTTCAGCAGTGTATGCAAGAACACGCGAAAGAG...AACAGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | GATAAAGTGTCCCTAAGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACAGCTGGTCTTTATCTTaGATCTCCTGTTCTAAAACG | + |
|
Preference number: 5 (lower is better) Translates to: DKVSLSRPTGKNLIQSSDSWSLS*ISCSKT Trigger: CGTTTTAGAACAGGAGATCAAAGATAAAGACCAGCT...GTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCTTAGGGACACTTTATC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | TTCAGTTTATATTCCCTGCAGGTGTATCTTGATAAAGTGTCCCTAAGCAGACCATATCGAATGCTTCTTTaGTTCTCAGAACAAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: FSLYSLQVYLDKVSLSRPYRMLL*FSEQAG Trigger: ACCAGCTTGTTCTGAGAACAAAAGAAGCATTCGATA...TGGTCTGCTTAGGGACACTTTATCAAGATACACCTGCAGGGAATATAAACTGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTTTTGTTTGTAGCTGGTaGATGTGCTTTTCTTTCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSFVCSW*MCFSFS Trigger: CGAGAAAGAAAAGCACATCAACCAGCTACAAACAAA...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS-3UTR CAA 90 bp | AGCAGACCAACTGGTAAGAATCTGATACAATCCAGTGACTTTTTGAAACATTCTTATCGAATGCTTCTTTaGTTCTCAGAACAAGCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: SRPTGKNLIQSSDFLKHSYRMLL*FSEQAG Trigger: ACCAGCTTGTTCTGAGAACAAAAGAAGCATTCGATA...AGAATGTTTCAAAAAGTCACTGGATTGTATCAGATTCTTACCAGTTGGTCTGCT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000197335.2 ENSMUST00000198311.5 |
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| CDS CCA 72 bp | ATGCTTGCATGTGCTCTGGGAAAGCTTCCTGTGTACTaGATTCGAAAGGGACTGCAGCTCAATGCTCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: MLACALGKLPVY*IRKGLQLNAHS Trigger: AGAGTGAGCATTGAGCTGCAGTCCCTTTCGAATCCAGTACACAGGAAGCTTTCCCAGAGCACATGCAAGCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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| CDS CAA 72 bp | AGGCAAAACCTAAAGTTACTGCCAACTACAAGATGCTaGCATGTGCTCTGGGAAAGCTTCCTGTGTACTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RQNLKLLPTTRC*HVLWESFLCTG Trigger: TCCAGTACACAGGAAGCTTTCCCAGAGCACATGCAAGCATCTTGTAGTTGGCAGTAACTTTAGGTTTTGCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029571.13 |
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