Pregenerated sensors for SASH3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031101Ensembl transcript IDs: ENSMUST00000033427.7
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGGCCTCAACCATAAGCCTCTCTGGGGAAGCAGGGCCAGATTCTaGACCGGTCCTCTGGTCCTATGCCATTATGGGAGGCCACACCCA | + |
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Preference number: 1 (lower is better) Translates to: RGLNHKPLWGSRARF*TGPLVLCHYGRPHP Trigger: TGGGTGTGGCCTCCCATAATGGCATAGGACCAGAGGACCGGTGCAGAATCTGGCCCTGCTTCCCCAGAGAGGCTTATGGTTGAGGCCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 90 bp | AAGCAGGGCCAGATTCTGCACCGGTCCTCTGGTCCTATGCCATTATaGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAG | + |
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Preference number: 1 (lower is better) Translates to: KQGQILHRSSGPMPL*EATPIPAVSAARVQ Trigger: CTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAATGGCATAGGACCAGAGGACCGGTGCAGAATCTGGCCCTGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | CAAAGGGCAGCATATGCCTTTGGGCAGTCCCTTATCCACTCTATCTaGGCCTGTAGCATCCTGGTAGGGGCCTCAACCATAAGCCTCTCT | + |
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Preference number: 1 (lower is better) Translates to: QRAAYAFGQSLIHSI*ACSILVGASTISLS Trigger: AGAGAGGCTTATGGTTGAGGCCCCTACCAGGATGCTACAGGCTCAGATAGAGTGGATAAGGGACTGCCCAAAGGCATATGCTGCCCTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 90 bp | CAGAAGATCCACATAAATGACCAAGCCTGGGTCCATACCAGCATCTaGCTTGCAGGAGGCAGGTGCATCATTGGAAGCCAGGTGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: QKIHINDQAWVHTSI*LAGGRCIIGSQVSP Trigger: TGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTGGATCTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | GGGAAACAGCGGCACTCAGTTTGGGTCACACAGAAAGGTATGAGATaGCTGAGAAGGCAGCGCTATTTCACTGGAAACCCTAGGCCCTTA | + |
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Preference number: 1 (lower is better) Translates to: GKQRHSVWVTQKGMR*LRRQRYFTGNPRPL Trigger: TAAGGGCCTAGGGTTTCCAGTGAAATAGCGCTGCCTTCTCAGTCATCTCATACCTTTCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 90 bp | CAAAGGCTCCCTTTGCTTCAGAAGATCCACATAAATGACCAAGCCTaGGTCCATACCAGCATCTGGCTTGCAGGAGGCAGGTGCATCATT | + |
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Preference number: 1 (lower is better) Translates to: QRLPLLQKIHINDQA*VHTSIWLAGGRCII Trigger: AATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTGGATCTTCTGAAGCAAAGGGAGCCTTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | CAATGTCAATCAAAGGCTCCCTTTGCTTCAGAAGATCCACATAAATaGCCAAGCCTGGGTCCATACCAGCATCTGGCTTGCAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: QCQSKAPFASEDPHK*PSLGPYQHLACRRQ Trigger: CTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTGGATCTTCTGAAGCAAAGGGAGCCTTTGATTGACATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR GCA 90 bp | AAACTCGAAGTTATGAAAGTCCCTGGTAGTAGTGGATCAGAAGCATaGCCACTTACTAAGCAGGTAGTCCTACCTGTGATGGGCACAGTT | + |
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Preference number: 1 (lower is better) Translates to: KLEVMKVPGSSGSEA*PLTKQVVLPVMGTV Trigger: AACTGTGCCCATCACAGGTAGGACTACCTGCTTAGTAAGTGGGCATGCTTCTGATCCACTACTACCAGGGACTTTCATAACTTCGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | ATCTCATTTGAAGGAGCCAAGGAACAGGTGGAGACACTTATCATATaGGCTATGGGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGT | + |
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Preference number: 1 (lower is better) Translates to: ISFEGAKEQVETLII*AMGIVLSWETAALS Trigger: ACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACCTGTTCCTTGGCTCCTTCAAATGAGAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | GCTATTGGAGTCAAGGGTACCCCAGTAATAGTTGTGATAATCTCCTaGTCCTGTGGAGTTAGGACACTAAAACCTTTAGCAGAGCAATGT | + |
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Preference number: 1 (lower is better) Translates to: AIGVKGTPVIVVIIS*SCGVRTLKPLAEQC Trigger: ACATTGCTCTGCTAAAGGTTTTAGTGTCCTAACTCCACAGGATCAGGAGATTATCACAACTATTACTGGGGTACCCTTGACTCCAATAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 90 bp | CTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATaGAAGTCCCTGGTAGTAGTGGATCAGAAGCATGCCCACTTACTA | + |
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Preference number: 1 (lower is better) Translates to: LLLMYIQLLCPNSKL*KSLVVVDQKHAHLL Trigger: TAGTAAGTGGGCATGCTTCTGATCCACTACTACCAGGGACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CAA 90 bp | CCTGGGTCCATACCAGCATCTGGCTTGCAGGAGGCAGGTGCATCATaGGAAGCCAGGTGTCACCATCTTCAACCAGCCTGTAGGAAATCT | + |
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Preference number: 2 (lower is better) Translates to: PGSIPASGLQEAGAS*EARCHHLQPACRKS Trigger: AGATTTCCTACAGGCTGGTTGAAGATGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR CCA 90 bp | AGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGAACCATAAGCCTCTCTaGGGAAGCAGGGCCAGATTC | + |
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Preference number: 2 (lower is better) Translates to: RCQKGPYCQSLVEGENPKNHKPL*GSRARF Trigger: GAATCTGGCCCTGCTTCCCCAGAGAGGCTTATGGTT...CTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR TCA 90 bp | TGCAGGAGGCAGGTGCATCATTGGAAGCCAGGTGTCACCATCTTCAACCAGCCTCTTATCCACTCTATCTaGGCCTGTAGCATCCTGGTA | + |
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Preference number: 2 (lower is better) Translates to: CRRQVHHWKPGVTIFNQPLIHSI*ACSILV Trigger: TACCAGGATGCTACAGGCTCAGATAGAGTGGATAAG...AGGCTGGTTGAAGATGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAAGGCAGCGCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAACCAGGGCTTAAAGAGTaGTTTGAGACAGTGGCTTGG | + |
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Preference number: 2 (lower is better) Translates to: LRRQRYFTGNPRPLQPLQPGLKE*FETVAW Trigger: CCAAGCCACTGTCTCAAAGCACTCTTTAAGCCCTGG...TTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGCGCTGCCTTCTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR GCA 90 bp | GGTGGAGACACTTATCATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCCCAAAGGGCAGCATATaGCTTTGGGCAGTCCCTTAT | + |
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Preference number: 2 (lower is better) Translates to: GGDTYHMSYGHCSKLGNSPKGSI*LWAVPY Trigger: ATAAGGGACTGCCCAAAGGCATATGCTGCCCTTTGG...GCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR TCA 90 bp | GGTGGAGACACTTATCATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCGAATCCCGACCAGGATaGAGTCAAAAGAAGCACAGA | + |
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Preference number: 2 (lower is better) Translates to: GGDTYHMSYGHCSKLGNSESRPG*SQKKHR Trigger: TCTGTGCTTCTTTTGACTTCATCCTGGTCGGGATTC...GCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 72 bp | CAGATTCTGCACCGGTCCTCTGGTCCTATGCCATTATaGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCT | + |
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Preference number: 3 (lower is better) Translates to: QILHRSSGPMPL*EATPIPAVSAA Trigger: AGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAATGGCATAGGACCAGAGGACCGGTGCAGAATCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR GCA 72 bp | AACCATAAGCCTCTCTGGGGAAGCAGGGCCAGATTCTaGACCGGTCCTCTGGTCCTATGCCATTATGGGAGG | + |
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Preference number: 3 (lower is better) Translates to: NHKPLWGSRARF*TGPLVLCHYGR Trigger: CCTCCCATAATGGCATAGGACCAGAGGACCGGTGCAGAATCTGGCCCTGCTTCCCCAGAGAGGCTTATGGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR GCA 72 bp | TGGGTCCATACCAGCATCTGGCTTGCAGGAGGCAGGTaGATCATTGGAAGCCAGGTGTCACCATCTTCAACC | + |
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Preference number: 3 (lower is better) Translates to: WVHTSIWLAGGR*IIGSQVSPSST Trigger: GGTTGAAGATGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 72 bp | ATAGGAGGTGCCAGAAGGGGCCATATTGTCAGTCACTaGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCC | + |
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Preference number: 3 (lower is better) Translates to: IGGARRGHIVSH*WRERIQRAAYA Trigger: GGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCTCCTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 72 bp | CACATAAATGACCAAGCCTGGGTCCATACCAGCATCTaGCTTGCAGGAGGCAGGTGCATCATTGGAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: HINDQAWVHTSI*LAGGRCIIGSQ Trigger: CTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR GCA 72 bp | TCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATaGCTTTGGGCAGTCCCTTATCCACTCTATCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: SLVEGENPKGSI*LWAVPYPLYLS Trigger: GCTCAGATAGAGTGGATAAGGGACTGCCCAAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 72 bp | AGTGGCTTGGCGTCCTTCTTAGAAGCAATGGGACAGTaGTGTGAGGGTAAGAAGGTTTTTGGGGCCGTGATC | + |
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Preference number: 3 (lower is better) Translates to: SGLASFLEAMGQ*CEGKKVFGAVI Trigger: GATCACGGCCCCAAAAACCTTCTTACCCTCACACCACTGTCCCATTGCTTCTAAGAAGGACGCCAAGCCACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CCA 72 bp | CCTTTGCTTCAGAAGATCCACATAAATGACCAAGCCTaGGTCCATACCAGCATCTGGCTTGCAGGAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: PLLQKIHINDQA*VHTSIWLAGGR Trigger: CCTGCCTCCTGCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTGGATCTTCTGAAGCAAAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | CGGCACTCAGTTTGGGTCACACAGAAAGGTATGAGATaGCTGAGAAGGCAGCGCTATTTCACTGGAAACCCT | + |
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Preference number: 3 (lower is better) Translates to: RHSVWVTQKGMR*LRRQRYFTGNP Trigger: AGGGTTTCCAGTGAAATAGCGCTGCCTTCTCAGTCATCTCATACCTTTCTGTGTGACCCAAACTGAGTGCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | TCAAAGGCTCCCTTTGCTTCAGAAGATCCACATAAATaGCCAAGCCTGGGTCCATACCAGCATCTGGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SKAPFASEDPHK*PSLGPYQHLAC Trigger: GCAAGCCAGATGCTGGTATGGACCCAGGCTTGGTCATTTATGTGGATCTTCTGAAGCAAAGGGAGCCTTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR CAA 90 bp | GGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGTCACACAGAAAGGCAGACCTCGAAAATGTaGAGAAGGATAGTGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: GIVLSWETAALSLGHTERQTSKM*RRIVEN Trigger: GTTCTCCACTATCCTTCTCAACATTTTCGAGGTCTG...CCTTTCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | GAAGGAGCCAAGGAACAGGTGGAGACACTTATCATATaGGCTATGGGCATTGTTCTAAGTTGGGAAACAGCG | + |
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Preference number: 3 (lower is better) Translates to: EGAKEQVETLII*AMGIVLSWETA Trigger: CGCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACCTGTTCCTTGGCTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | ATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATaGAAGTCCCTGGTAGTAGTGGATCAGAAGCATGCC | + |
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Preference number: 3 (lower is better) Translates to: MYIQLLCPNSKL*KSLVVVDQKHA Trigger: GGCATGCTTCTGATCCACTACTACCAGGGACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | GTCAAGGGTACCCCAGTAATAGTTGTGATAATCTCCTaGTCCTGTGGAGTTAGGACACTAAAACCTTTAGCA | + |
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Preference number: 3 (lower is better) Translates to: VKGTPVIVVIIS*SCGVRTLKPLA Trigger: TGCTAAAGGTTTTAGTGTCCTAACTCCACAGGATCAGGAGATTATCACAACTATTACTGGGGTACCCTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR-3UTR CAA 90 bp | CGCTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATGAAAGTAATCAAAGGCTCCCTTaGCTTCAGAAGATCCACATA | + |
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Preference number: 3 (lower is better) Translates to: RYSLCTFNSFAQTRSYESNQRLP*LQKIHI Trigger: TATGTGGATCTTCTGAAGCAAAGGGAGCCTTTGATT...ACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR TCA 72 bp | CTCGAAAATGTTGAGAAGGATAGTGGAGAACGGGTGTaGAGGTTCTTTCAAACCTCATTTAAGGAATTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LENVEKDSGERV*RFFQTSFKEFQ Trigger: TTGGAATTCCTTAAATGAGGTTTGAAAGAACCTTCACACCCGTTCTCCACTATCCTTCTCAACATTTTCGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | TTATGGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAGCCTCAGTGGGCTTGGGCCTCTTaGCTTTGCTCTGTCGGCGAC | + |
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Preference number: 4 (lower is better) Translates to: LWEATPIPAVSAARVQPQWAWAS*LCSVGD Trigger: GTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCA...CTGAGGCTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR TCA 90 bp | TCCATACCAGCATCTGGCTTGCAGGAGGCAGGTGCATCATTGGAAGCCAGGTGTATCACGCCCACTCTCTaGGCCCTCAAAGCAGCCGGA | + |
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Preference number: 4 (lower is better) Translates to: SIPASGLQEAGASLEARCITPTL*ALKAAG Trigger: TCCGGCTGCTTTGAGGGCTCAGAGAGTGGGCGTGAT...ACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | GGGAGAATAGGAGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGTTGCTCTTCTGTGCCTaGCAGCTCTGCCTCATCACG | + |
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Preference number: 4 (lower is better) Translates to: GRIGGARRGHIVSHWWRELLFCA*QLCLIT Trigger: CGTGATGAGGCAGAGCTGGCAGGCACAGAAGAGCAA...CTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCTCCTATTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | GGGAGAATAGGAGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGGCAGTTGCTCTTCTGTaGCTGCCAGCTCTGCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: GRIGGARRGHIVSHWWREAVALL*LPALPH Trigger: ATGAGGCAGAGCTGGCAGGCACAGAAGAGCAACTGC...CTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCTCCTATTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | CTGGTCCTATGCCATTATGGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCTACTTGGCCCGGTGTTGTaGGTCCATGATGTTCAGCTC | + |
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Preference number: 4 (lower is better) Translates to: LVLCHYGRPHPSLQSLQLLGPVL*VHDVQL Trigger: GAGCTGAACATCATGGACCCACAACACCGGGCCAAG...TAGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAATGGCATAGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR TCA 90 bp | GGAAGCAGGGCCAGATTCTGCACCGGTCCTCTGGTCCTATGCCATTATGGGAGGGCTGGAGCGCTGAAGTaGGAGCTTTTTCTTCTGAGT | + |
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Preference number: 4 (lower is better) Translates to: GSRARFCTGPLVLCHYGRAGALK*ELFLLS Trigger: ACTCAGAAGAAAAAGCTCTCACTTCAGCGCTCCAGC...CCTCCCATAATGGCATAGGACCAGAGGACCGGTGCAGAATCTGGCCCTGCTTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR TCA 90 bp | TATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTGGGTCCACCTTGGGTTCTaGCACTGTGTGCGCCACGGG | + |
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Preference number: 4 (lower is better) Translates to: YCQSLVEGENPKGSICLWVHLGF*HCVRHG Trigger: CCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGAC...CCAAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | CTGAGAAGGCAGCGCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAAGGTTCTGACACTGTGTaGGCCACGGGTTCCTGGCTG | + |
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Preference number: 4 (lower is better) Translates to: LRRQRYFTGNPRPLQPLQGSDTV*ATGSWL Trigger: CAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACC...TTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGCGCTGCCTTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | CTTACTAAGCAGGTAGTCCTACCTGTGATGGGCACAGTTGACCCCACTTCAGGAGCAGCCGGAGTCACGTaGGATGTCCACCTTGGGTTC | + |
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Preference number: 4 (lower is better) Translates to: LTKQVVLPVMGTVDPTSGAAGVT*DVHLGF Trigger: GAACCCAAGGTGGACATCCCACGTGACTCCGGCTGC...TCCTGAAGTGGGGTCAACTGTGCCCATCACAGGTAGGACTACCTGCTTAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR TCA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTGCAGCTCTGCAGCTGTaGGCAGCTTGGCCCGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: HIVSHWWRERIQRAAYAFAALQL*AAWPGV Trigger: AACACCGGGCCAAGCTGCTCACAGCTGCAGAGCTGC...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTTGGGCCTCTTGCCTTTaGTCTGTCGGCGACTGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HIVSHWWRERIQRAAYAFWASCL*SVGDWG Trigger: GCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCA...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | GCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCATCACCACGGGGGAGCTaGGCTTCGATTTGGCAAAAT | + |
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Preference number: 4 (lower is better) Translates to: ARRGHIVSHWWRERIQRASPRGS*ASIWQN Trigger: ATTTTGCCAAATCGAAGCCCAGCTCCCCCGTGGTGA...TGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | GCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAAGAAGCCTACTCACGAAGCTTCCCGAGCCTaGGCCAGGGCTACAGAGTTC | + |
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Preference number: 4 (lower is better) Translates to: AISLETLGPYSLFKKPTHEASRA*ARATEF Trigger: GAACTCTGTAGCCCTGGCCCAGGCTCGGGAAGCTTC...GTGAGTAGGCTTCTTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | GCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAAGAAGCCTACTCACGGAGTGAAGTCAGTGTaGACTCGGGCACGCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: AISLETLGPYSLFKKPTHGVKSV*TRARPQ Trigger: CTGTGGGCGTGCCCGAGTCCACACTGACTTCACTCC...GTGAGTAGGCTTCTTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | CATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGTGCTCTGTCGGCGACTaGGGCGTACAGGTCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: HMSYGHCSKLGNSGTQFGCSVGD*GVQVPQ Trigger: CTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCA...CCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| 3UTR CAA 72 bp | ATACCAGCATCTGGCTTGCAGGAGGCAGGTGCATCATaGGAAGCCAGGTGTCACCATCTTCAACCAGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: IPASGLQEAGAS*EARCHHLQPAC Trigger: ACAGGCTGGTTGAAGATGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTAT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | TCCATACCAGCATCTGGCTTGCAGGAGGCAGGTGCATCATTGGAAGCCAGGTGTAAGCTGCTGGAGCGCTaGAGTGAGAGCTTTTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIPASGLQEAGASLEARCKLLER*SESFFF Trigger: GAAGAAAAAGCTCTCACTTCAGCGCTCCAGCAGCTT...ACACCTGGCTTCCAATGATGCACCTGCCTCCTGCAAGCCAGATGCTGGTATGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | GGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGTCACACAGAAAGGCATAAGGGCTGGGAGTaGAGTCAGTGTGGACTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: GIVLSWETAALSLGHTERHKGWE*SQCGLG Trigger: CCCGAGTCCACACTGACTTCACTCCCAGCCCTTATG...CCTTTCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTAACCCAGCTTGCCATTaGGCAGGCCCAGCCATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHWWRERIQRAAYAFNPACH*AGPAMC Trigger: GCACATGGCTGGGCCTGCTCAATGGCAAGCTGGGTT...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | CATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGCCACGGGTTCCTGGCTaGTCTCAGCACCCTCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: HMSYGHCSKLGNSGTQFGPRVPG*SQHPLQ Trigger: CTGAAGAGGGTGCTGAGAGCAGCCAGGAACCCGTGG...CCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CCA 90 bp | CTGAGAAGGCAGCGCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAAGTGGGATGTCCACCTTaGGTTCTGACACTGTGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LRRQRYFTGNPRPLQPLQVGCPP*VLTLCA Trigger: CGCACACAGTGTCAGAACCCAAGGTGGACATCCCAC...TTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGCGCTGCCTTCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| 3UTR CAA 72 bp | GGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTaGGGCAGTCCCTTATCCACTCTATCTGAGCCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: GGGRESKGQHMP*GSPLSTLSEPV Trigger: TACAGGCTCAGATAGAGTGGATAAGGGACTGCCCAAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | TGCAGGAGGCAGGTGCATCATTGGAAGCCAGGTGTCACCATCTTCAACCAGCCTCCTTCACCATCATCTTaGCCATCTTCCTGTTCATGG | + |
|
Preference number: 4 (lower is better) Translates to: CRRQVHHWKPGVTIFNQPPSPSS*PSSCSW Trigger: CCATGAACAGGAAGATGGGCAAGATGATGGTGAAGG...AGGCTGGTTGAAGATGGTGACACCTGGCTTCCAATGATGCACCTGCCTCCTGCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTGAGAGACCCTGCAGTTaGTCTTCTGTGCCTGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHWWRERIQRAAYAFERPCS*SSVPAS Trigger: GCTGGCAGGCACAGAAGAGCAACTGCAGGGTCTCTC...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CCA 90 bp | AGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAGCCTCAGCCTTAAAGGCTTTTCAACGATCTaGATCACATCTCCTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RPHPSLQSLQLGFSLSLKGFSTI*ITSPFC Trigger: GCAGAAAGGAGATGTGATCCAGATCGTTGAAAAGCC...TTTAAGGCTGAGGCTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | GGGAGAATAGGAGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGCGGGGTAAGAACACCTaGATCATCTTCTGGAATATT | + |
|
Preference number: 4 (lower is better) Translates to: GRIGGARRGHIVSHWWRERGKNT*IIFWNI Trigger: AATATTCCAGAAGATGATTCAGGTGTTCTTACCCCG...CTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCTCCTATTCTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | CTTACTAAGCAGGTAGTCCTACCTGTGATGGGCACAGTTGACCCCACTTCAGGAGGTTCGGGAAATGACTaGCCTCCACTTCTTTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: LTKQVVLPVMGTVDPTSGGSGND*PPLLSQ Trigger: TTGGGAAAGAAGTGGAGGGCAGTCATTTCCCGAACC...TCCTGAAGTGGGGTCAACTGTGCCCATCACAGGTAGGACTACCTGCTTAGTAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CCA 90 bp | GGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGTCACACAGAAAGGCTTTGTCACTGGCGTTaGAGGGTTTGCGACGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: GIVLSWETAALSLGHTERLCHWR*RVCDAT Trigger: TGTTGCGTCGCAAACCCTCCAACGCCAGTGACAAAG...CCTTTCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | GCTATTTCACTGGAAACCCTAGGCCCTTACAGCCTCTTCAAGAAGCCTACTCACTTCAGCTCATTGAGGTaGGTTTCCCGCAGCTCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: AISLETLGPYSLFKKPTHFSSLR*VSRSSL Trigger: CAAAGAGCTGCGGGAAACGCACCTCAATGAGCTGAA...GTGAGTAGGCTTCTTGAAGAGGCTGTAAGGGCCTAGGGTTTCCAGTGAAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | GTGGAGAACGGGTGTGAAGGTTCTTTCAAACCTCATTTAAGGAATTCCAAACTCTGTGCCTGCCAGCTCTaGCTCATCACGCCCACTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VENGCEGSFKPHLRNSKLCACQL*LITPTL Trigger: GAGAGTGGGCGTGATGAGGCAGAGCTGGCAGGCACA...GAGTTTGGAATTCCTTAAATGAGGTTTGAAAGAACCTTCACACCCGTTCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CCA 90 bp | GGCATTGTTCTAAGTTGGGAAACAGCGGCACTCAGTTTGGGTCACACAGAAAGGCCATGTGCCCACAGGTaGCTTTTCAACGATCTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: GIVLSWETAALSLGHTERPCAHR*LFNDLD Trigger: ATCCAGATCGTTGAAAAGCCACCTGTGGGCACATGG...CCTTTCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | CGCTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATGAAAGTCGGGGCTGTCCAGGCTaGAGTCTGGAGATGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: RYSLCTFNSFAQTRSYESRGCPG*SLEMLE Trigger: CTCCAACATCTCCAGACTGCAGCCTGGACAGCCCCG...ACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | CCAGCCTGTAGGAAATCTCATTTGAAGGAGCCAAGGAACAGGTGGAGACACTTAGAGAGCTTTTTCTTCTaGGTGGGCTCTTTGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: PACRKSHLKEPRNRWRHLESFFF*VGSLSL Trigger: CAGTGACAAAGAGCCCACTCAGAAGAAAAAGCTCTC...TAAGTGTCTCCACCTGTTCCTTGGCTCCTTCAAATGAGATTTCCTACAGGCTGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | CGCTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATGAAAGTGCGTCTGGTAGCCATTaGGCAGTAGGGTGGATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RYSLCTFNSFAQTRSYESASGSH*AVGWMC Trigger: ACACATCCACCCTACTGCTCAATGGCTACCAGACGC...ACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAGCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| 3UTR CAA 72 bp | TGTAGTGGAGCCTCCAATGTCAATCAAAGGCTCCCTTaGCTTCAGAAGATCCACATAAATGACCAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CSGASNVNQRLP*LQKIHINDQAW Trigger: CCAGGCTTGGTCATTTATGTGGATCTTCTGAAGCAAAGGGAGCCTTTGATTGACATTGGAGGCTCCACTACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR TCA 90 bp | GTGGAGAACGGGTGTGAAGGTTCTTTCAAACCTCATTTAAGGAATTCCAAACTCTCATGGTTCGGGAAATaGCTGCCCTCCACTTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VENGCEGSFKPHLRNSKLSWFGK*LPSTSF Trigger: GAAAGAAGTGGAGGGCAGTCATTTCCCGAACCATGA...GAGTTTGGAATTCCTTAAATGAGGTTTGAAAGAACCTTCACACCCGTTCTCCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR GCA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTTCTTTCCCAACTTTTTaGCACTCTTCCCAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: HIVSHWWRERIQRAAYAFSFPTF*HSSQNP Trigger: AGGATTCTGGGAAGAGTGGCAAAAAGTTGGGAAAGA...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| 3UTR CAA 72 bp | GACACTTATCATATGAGCTATGGGCATTGTTCTAAGTaGGGAAACAGCGGCACTCAGTTTGGGTCACACAGA | + |
|
Preference number: 4 (lower is better) Translates to: DTYHMSYGHCSK*GNSGTQFGSHR Trigger: TCTGTGTGACCCAAACTGAGTGCCGCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| 3UTR CAA 72 bp | TGTCACCATCTTCAACCAGCCTGTAGGAAATCTCATTaGAAGGAGCCAAGGAACAGGTGGAGACACTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: CHHLQPACRKSH*KEPRNRWRHLS Trigger: TGATAAGTGTCTCCACCTGTTCCTTGGCTCCTTCAAATGAGATTTCCTACAGGCTGGTTGAAGATGGTGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR GCA 90 bp | CGCTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATGAAAGTATCACATCTCCTTTCTaGAGTTTCAATGAGTCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RYSLCTFNSFAQTRSYESITSPF*SFNESW Trigger: CCACGACTCATTGAAACTGCAGAAAGGAGATGTGAT...ACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAGCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 90 bp | CCTGTTGATGTCTGGCGGCTGAGAGATGGCGGCTCACGCTCCTCCTaGTCAGTAAAGGCCAGGGCCATCTTCTCAGGCCCGGGGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: PVDVWRLRDGGSRSS*SVKARAIFSGPGLS Trigger: GGACAGCCCCGGGCCTGAGAAGATGGCCCTGGCCTTTACTGAGCAGGAGGAGCGTGAGCCGCCATCTCTCAGCCGCCAGACATCAACAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | AAGTCAGTGTGGACTCGGGCACGCCCACAGAAAGGCCCCGTGTACTaGGGAGCCGGTGACTCCTCTAGGAAGCTTCCCGAGCCTGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: KSVWTRARPQKGPVY*GAGDSSRKLPEPGP Trigger: TGGCCCAGGCTCGGGAAGCTTCCTAGAGGAGTCACCGGCTCCCCAGTACACGGGGCCTTTCTGTGGGCGTGCCCGAGTCCACACTGACTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 90 bp | GCCCTCAAAGCAGCCGGAGTCACGTGGGATGTCCACCTTGGGTTCTaGCACTGTGTGCGCCACGGGTTCCTGGCTGCTCTCAGCACCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ALKAAGVTWDVHLGF*HCVRHGFLAALSTL Trigger: GAGGGTGCTGAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGACATCCCACGTGACTCCGGCTGCTTTGAGGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 90 bp | GCTCCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTTGCCTTTaGTCTGTCGGCGACTGGGGCGTACAGGTCCCACAGCCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: APAVHAESWAWASCL*SVGDWGVQVPQPPR Trigger: CCGAGGAGGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | GCAGAGTCTTGGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGACTaGGGCGTACAGGTCCCACAGCCTCCTCGGGTAGCACATCCACGT | + |
|
Preference number: 5 (lower is better) Translates to: AESWAWASCLCSVGD*GVQVPQPPRVAHPR Trigger: ACGTGGATGTGCTACCCGAGGAGGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS GCA 90 bp | CAATGCGCTCCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTTaGCTTTGCTCTGTCGGCGACTGGGGCGTACAGGTCCCACAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QCAPAVHAESWAWAS*LCSVGDWGVQVPQP Trigger: AGGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | CCTCTAGGCCAATGCGCTCCAGCAGTTCATGCAGAGTCTTGGGCTTaGGCCTCTTGCCTTTGCTCTGTCGGCGACTGGGGCGTACAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: PLGQCAPAVHAESWA*ASCLCSVGDWGVQV Trigger: GACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | TCTCTGAGCCCTCAAAGCAGCCGGAGTCACGTGGGATGTCCACCTTaGGTTCTGACACTGTGTGCGCCACGGGTTCCTGGCTGCTCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SLSPQSSRSHVGCPP*VLTLCAPRVPGCSQ Trigger: CTGAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGACATCCCACGTGACTCCGGCTGCTTTGAGGGCTCAGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | GGGATGTCCACCTTGGGTTCTGACACTGTGTGCGCCACGGGTTCCTaGCTGCTCTCAGCACCCTCTTCAGCCTCTTCACTGCCAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GMSTLGSDTVCATGS*LLSAPSSASSLPVS Trigger: TGACACTGGCAGTGAAGAGGCTGAAGAGGGTGCTGAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGACATCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 90 bp | TGTGTTCCTCTAGGCCAATGCGCTCCAGCAGTTCATGCAGAGTCTTaGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGACTGGGGCGTA | + |
|
Preference number: 5 (lower is better) Translates to: CVPLGQCAPAVHAES*AWASCLCSVGDWGV Trigger: TACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGGAACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTATGCCATTATGGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCTATTGGGCTTGGGCCTCTaGCCTTTGCTCTGTCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: LVLCHYGRPHPSLQSLQLLGLGL*PLLCRR Trigger: TCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAA...TAGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAATGGCATAGGACCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGCAGCTGTGAGCAGCTaGGCCCGGTGTTGTGGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: RCQKGPYCQSLVEGENPKAAVSS*ARCCGS Trigger: GGACCCACAACACCGGGCCAAGCTGCTCACAGCTGC...CTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS GCA 90 bp | AGGGTGGATGTGTGTTCCTCTAGGCCAATGCGCTCCAGCAGTTCATaGAGAGTCTTGGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: RVDVCSSRPMRSSSS*RVLGLGLLPLLCRR Trigger: TCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGGAACACACATCCACCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAGCCTCAGCCTTAAATGCAGAGTCTTGGGCTaGGGCCTCTTGCCTTTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPHPSLQSLQLGFSLSLKCRVLG*GLLPLL Trigger: GAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCA...TTTAAGGCTGAGGCTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS TCA 90 bp | CTCCTTTCTGCAGTTTCAATGAGTCGTGGTCATAAGGGCTGGGAGTaGAGTCAGTGTGGACTCGGGCACGCCCACAGAAAGGCCCCGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LLSAVSMSRGHKGWE*SQCGLGHAHRKAPC Trigger: ACACGGGGCCTTTCTGTGGGCGTGCCCGAGTCCACACTGACTTCACTCCCAGCCCTTATGACCACGACTCATTGAAACTGCAGAAAGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | CTGGTCCTATGCCATTATGGGAGGCCACACCCATCCCTGCAGTCTCTGCAGCTATTGAAAGAACCCAGCTaGCCATTGAGCAGGCCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LVLCHYGRPHPSLQSLQLLKEPS*PLSRPS Trigger: GCTGGGCCTGCTCAATGGCAAGCTGGGTTCTTTCAA...TAGCTGCAGAGACTGCAGGGATGGGTGTGGCCTCCCATAATGGCATAGGACCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAGCCTCAGCCTTAAAAGTTCATGCAGAGTCTaGGGCTTGGGCCTCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: RPHPSLQSLQLGFSLSLKSSCRV*GLGLLP Trigger: AGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACT...TTTAAGGCTGAGGCTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGCCACACCCATCCCTGCAGTCTCTGCAGCTAGGGTTCAGCCTCAGCCTTAAAGTTTCCCGCAGCTCTTaGAAGTCTTCGAGCGTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RPHPSLQSLQLGFSLSLKVSRSS*KSSSVW Trigger: CCAGACGCTCGAAGACTTCAAAGAGCTGCGGGAAAC...TTTAAGGCTGAGGCTGAACCCTAGCTGCAGAGACTGCAGGGATGGGTGTGGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGAGAGACCCTGCAGTaGCTCTTCTGTGCCTGCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RCQKGPYCQSLVEGENPKGETLQ*LFCACQ Trigger: CTGGCAGGCACAGAAGAGCAACTGCAGGGTCTCTCC...CTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTTTGGGCCTCTTGCCTTaGCTCTGTCGGCGACTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: HIVSHWWRERIQRAAYAFLGLLP*LCRRLG Trigger: CCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAA...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
||
| CDS-3UTR CAA 90 bp | AGGTGCCAGAAGGGGCCATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGCCTTCACCATCATCTaGCCCATCTTCCTGTTCATG | + |
|
Preference number: 5 (lower is better) Translates to: RCQKGPYCQSLVEGENPKAFTII*PIFLFM Trigger: CATGAACAGGAAGATGGGCAAGATGATGGTGAAGGC...CTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATGGCCCCTTCTGGCACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGTAGGAAATCTCATTTGAAGGAGCCAAGGAACAGGTGGAGACACTTACAGCTTGGCCCGGTGTaGTGGGTCCATGATGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: PACRKSHLKEPRNRWRHLQLGPV*WVHDVQ Trigger: CTGAACATCATGGACCCACAACACCGGGCCAAGCTG...TAAGTGTCTCCACCTGTTCCTTGGCTCCTTCAAATGAGATTTCCTACAGGCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 90 bp | CCTTCACCATCATCTTGCCCATCTTCCTGTTCATGGTTCGGGAAATaGCTGCCCTCCACTTCTTTCCCAACTTTTTGCCACTCTTCCCAG | + |
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Preference number: 5 (lower is better) Translates to: PSPSSCPSSCSWFGK*LPSTSFPTFCHSSQ Trigger: CTGGGAAGAGTGGCAAAAAGTTGGGAAAGAAGTGGAGGGCAGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTGAAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | CCAGCCTGTAGGAAATCTCATTTGAAGGAGCCAAGGAACAGGTGGAGACACTTAATGATGTTCAGCTCATaGAGGTGCGTTTCCCGCAGC | + |
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Preference number: 5 (lower is better) Translates to: PACRKSHLKEPRNRWRHLMMFSS*RCVSRS Trigger: GCTGCGGGAAACGCACCTCAATGAGCTGAACATCAT...TAAGTGTCTCCACCTGTTCCTTGGCTCCTTCAAATGAGATTTCCTACAGGCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | GGTGGAGACACTTATCATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCCGTGGGATGTCCACCTaGGGTTCTGACACTGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: GGDTYHMSYGHCSKLGNSRGMST*GSDTVC Trigger: GCACACAGTGTCAGAACCCAAGGTGGACATCCCACG...GCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 90 bp | CACCATCATCTTGCCCATCTTCCTGTTCATGGTTCGGGAAATGACTaGCCTCCACTTCTTTCCCAACTTTTTGCCACTCTTCCCAGAATC | + |
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Preference number: 5 (lower is better) Translates to: HHHLAHLPVHGSGND*PPLLSQLFATLPRI Trigger: GATTCTGGGAAGAGTGGCAAAAAGTTGGGAAAGAAGTGGAGGGCAGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | CATATTGTCAGTCACTGGTGGAGGGAGAGAATCCAAAGGGCAGCATATGCCTTTGAGCTGGGCTTCGATTaGGCAAAATCCTTGAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HIVSHWWRERIQRAAYAFELGFD*AKSLKL Trigger: CAGCTTCAAGGATTTTGCCAAATCGAAGCCCAGCTC...AAAGGCATATGCTGCCCTTTGGATTCTCTCCCTCCACCAGTGACTGACAATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | CGCTACTCCTTATGTACATTCAACTCCTTTGCCCAAACTCGAAGTTATGAAAGTTGCAGTCTGGAGATGTaGGAGAAGCTGAGCCCTCTT | + |
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Preference number: 5 (lower is better) Translates to: RYSLCTFNSFAQTRSYESCSLEM*EKLSPL Trigger: AAGAGGGCTCAGCTTCTCCAACATCTCCAGACTGCA...ACTTTCATAACTTCGAGTTTGGGCAAAGGAGTTGAATGTACATAAGGAGTAGCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS-3UTR CAA 90 bp | GGTGGAGACACTTATCATATGAGCTATGGGCATTGTTCTAAGTTGGGAAACAGCTTCTTTCCCAACTTTTaGCCACTCTTCCCAGAATCC | + |
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Preference number: 5 (lower is better) Translates to: GGDTYHMSYGHCSKLGNSFFPNF*PLFPES Trigger: GGATTCTGGGAAGAGTGGCAAAAAGTTGGGAAAGAA...GCTGTTTCCCAACTTAGAACAATGCCCATAGCTCATATGATAAGTGTCTCCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 90 bp | CAACTTTTTGCCACTCTTCCCAGAATCCTCCGGGGTAAGAACACCTaGATCATCTTCTGGAATATTATCATCCAGGTTAAATTCTTTCTC | + |
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Preference number: 5 (lower is better) Translates to: QLFATLPRILRGKNT*IIFWNIIIQVKFFL Trigger: GAGAAAGAATTTAACCTGGATGATAATATTCCAGAAGATGATTCAGGTGTTCTTACCCCGGAGGATTCTGGGAAGAGTGGCAAAAAGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 72 bp | TGGACTCGGGCACGCCCACAGAAAGGCCCCGTGTACTaGGGAGCCGGTGACTCCTCTAGGAAGCTTCCCGAG | + |
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Preference number: 6 (lower is better) Translates to: WTRARPQKGPVY*GAGDSSRKLPE Trigger: CTCGGGAAGCTTCCTAGAGGAGTCACCGGCTCCCCAGTACACGGGGCCTTTCTGTGGGCGTGCCCGAGTCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 72 bp | TGGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGACTaGGGCGTACAGGTCCCACAGCCTCCTCGGGTAGCA | + |
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Preference number: 6 (lower is better) Translates to: WAWASCLCSVGD*GVQVPQPPRVA Trigger: TGCTACCCGAGGAGGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 72 bp | CGAGCCTGGGCCAGGGCTACAGAGTTCACTGCCTGTTaGTGTCTGGCGGCTGAGAGATGGCGGCTCACGCTC | + |
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Preference number: 6 (lower is better) Translates to: RAWARATEFTAC*CLAAERWRLTL Trigger: GAGCGTGAGCCGCCATCTCTCAGCCGCCAGACATCAACAGGCAGTGAACTCTGTAGCCCTGGCCCAGGCTCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 72 bp | GCAGCCGGAGTCACGTGGGATGTCCACCTTGGGTTCTaGCACTGTGTGCGCCACGGGTTCCTGGCTGCTCTC | + |
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Preference number: 6 (lower is better) Translates to: AAGVTWDVHLGF*HCVRHGFLAAL Trigger: GAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGACATCCCACGTGACTCCGGCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | CGCTCCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTTGCCTTaGCTCTGTCGGCGACTGGGGCGTACAGGTCCCACAGCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: RSSSSCRVLGLGLLP*LCRRLGRTGPTASS Trigger: CGAGGAGGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | CCAATGCGCTCCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTaGCCTTTGCTCTGTCGGCGACTGGGGCGTACAGGTCCCACAGCC | + |
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Preference number: 6 (lower is better) Translates to: PMRSSSSCRVLGLGL*PLLCRRLGRTGPTA Trigger: GGCTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | CCAGGGCCATCTTCTCAGGCCCGGGGCTGTCCAGGCTaGAGTCTGGAGATGTTGGAGAAGCTGAGCCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: PGPSSQARGCPG*SLEMLEKLSPL Trigger: AAGAGGGCTCAGCTTCTCCAACATCTCCAGACTGCAGCCTGGACAGCCCCGGGCCTGAGAAGATGGCCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | CTCTCTGAGCCCTCAAAGCAGCCGGAGTCACGTGGGATGTCCACCTaGGGTTCTGACACTGTGTGCGCCACGGGTTCCTGGCTGCTCTCA | + |
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Preference number: 6 (lower is better) Translates to: LSEPSKQPESRGMST*GSDTVCATGSWLLS Trigger: TGAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCAAGGTGGACATCCCACGTGACTCCGGCTGCTTTGAGGGCTCAGAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | GTTCATGCAGAGTCTTGGGCTTGGGCCTCTTGCCTTTaGTCTGTCGGCGACTGGGGCGTACAGGTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: VHAESWAWASCL*SVGDWGVQVPQ Trigger: CTGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | CCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTTaGCTTTGCTCTGTCGGCGACTGGGGCGTACAGGTC | + |
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Preference number: 6 (lower is better) Translates to: PAVHAESWAWAS*LCSVGDWGVQV Trigger: GACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | TGGGTTCTGACACTGTGTGCGCCACGGGTTCCTGGCTaGTCTCAGCACCCTCTTCAGCCTCTTCACTGCCAG | + |
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Preference number: 6 (lower is better) Translates to: WVLTLCAPRVPG*SQHPLQPLHCQ Trigger: CTGGCAGTGAAGAGGCTGAAGAGGGTGCTGAGAGCAGCCAGGAACCCGTGGCGCACACAGTGTCAGAACCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 72 bp | CAATGCGCTCCAGCAGTTCATGCAGAGTCTTGGGCTTaGGCCTCTTGCCTTTGCTCTGTCGGCGACTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: QCAPAVHAESWA*ASCLCSVGDWG Trigger: GCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | TCCTCTAGGCCAATGCGCTCCAGCAGTTCATGCAGAGTCTTGGGCTaGGGCCTCTTGCCTTTGCTCTGTCGGCGACTGGGGCGTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSRPMRSSSSCRVLG*GLLPLLCRRLGRTG Trigger: ACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | GTGTGTTCCTCTAGGCCAATGCGCTCCAGCAGTTCATGCAGAGTCTaGGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGACTGGGGCGT | + |
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Preference number: 6 (lower is better) Translates to: VCSSRPMRSSSSCRV*GLGLLPLLCRRLGR Trigger: ACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGGAACACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 72 bp | AGTTCATGCAGAGTCTTGGGCTTGGGCCTCTTGCCTTaGCTCTGTCGGCGACTGGGGCGTACAGGTCCCACA | + |
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Preference number: 6 (lower is better) Translates to: SSCRVLGLGLLP*LCRRLGRTGPT Trigger: TGTGGGACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 72 bp | TCCAGCAGTTCATGCAGAGTCTTGGGCTTGGGCCTCTaGCCTTTGCTCTGTCGGCGACTGGGGCGTACAGGT | + |
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Preference number: 6 (lower is better) Translates to: SSSSCRVLGLGL*PLLCRRLGRTG Trigger: ACCTGTACGCCCCAGTCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 72 bp | TCTAGGCCAATGCGCTCCAGCAGTTCATGCAGAGTCTaGGGCTTGGGCCTCTTGCCTTTGCTCTGTCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: SRPMRSSSSCRV*GLGLLPLLCRR Trigger: TCGCCGACAGAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | GTGAGCAGCTTGGCCCGGTGTTGTGGGTCCATGATGTTCAGCTCATaGAGGTGCGTTTCCCGCAGCTCTTTGAAGTCTTCGAGCGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VSSLARCCGSMMFSS*RCVSRSSLKSSSVW Trigger: CCAGACGCTCGAAGACTTCAAAGAGCTGCGGGAAACGCACCTCAATGAGCTGAACATCATGGACCCACAACACCGGGCCAAGCTGCTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | GTGTGTTCCTCTAGGCCAATGCGCTCCAGCAGTTCATaGAGAGTCTTGGGCTTGGGCCTCTTGCCTTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: VCSSRPMRSSSS*RVLGLGLLPLL Trigger: GAGCAAAGGCAAGAGGCCCAAGCCCAAGACTCTGCATGAACTGCTGGAGCGCATTGGCCTAGAGGAACACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 72 bp | GCAGTTTCAATGAGTCGTGGTCATAAGGGCTGGGAGTaGAGTCAGTGTGGACTCGGGCACGCCCACAGAAAG | + |
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Preference number: 6 (lower is better) Translates to: AVSMSRGHKGWE*SQCGLGHAHRK Trigger: CTTTCTGTGGGCGTGCCCGAGTCCACACTGACTTCACTCCCAGCCCTTATGACCACGACTCATTGAAACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 90 bp | TCCAGCGTGTCTCCCATCTCCTCTGACAAGGCCTTCACCATCATCTaGCCCATCTTCCTGTTCATGGTTCGGGAAATGACTGCCCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSVSPISSDKAFTII*PIFLFMVREMTALH Trigger: GTGGAGGGCAGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTGAAGGCCTTGTCAGAGGAGATGGGAGACACGCTGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 72 bp | TTGGCCCGGTGTTGTGGGTCCATGATGTTCAGCTCATaGAGGTGCGTTTCCCGCAGCTCTTTGAAGTCTTCG | + |
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Preference number: 6 (lower is better) Translates to: LARCCGSMMFSS*RCVSRSSLKSS Trigger: CGAAGACTTCAAAGAGCTGCGGGAAACGCACCTCAATGAGCTGAACATCATGGACCCACAACACCGGGCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CCA 72 bp | CCCAGCCATGTGCCCACAGGTGGCTTTTCAACGATCTaGATCACATCTCCTTTCTGCAGTTTCAATGAGTCG | + |
|
Preference number: 6 (lower is better) Translates to: PSHVPTGGFSTI*ITSPFCSFNES Trigger: CGACTCATTGAAACTGCAGAAAGGAGATGTGATCCAGATCGTTGAAAAGCCACCTGTGGGCACATGGCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS CAA 72 bp | TCTCCCATCTCCTCTGACAAGGCCTTCACCATCATCTaGCCCATCTTCCTGTTCATGGTTCGGGAAATGACT | + |
|
Preference number: 6 (lower is better) Translates to: SPISSDKAFTII*PIFLFMVREMT Trigger: AGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGATGGTGAAGGCCTTGTCAGAGGAGATGGGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 72 bp | TCATCTTGCCCATCTTCCTGTTCATGGTTCGGGAAATaGCTGCCCTCCACTTCTTTCCCAACTTTTTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SSCPSSCSWFGK*LPSTSFPTFCH Trigger: GTGGCAAAAAGTTGGGAAAGAAGTGGAGGGCAGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAGATGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS GCA 72 bp | CTTGCCCATCTTCCTGTTCATGGTTCGGGAAATGACTaGCCTCCACTTCTTTCCCAACTTTTTGCCACTCTT | + |
|
Preference number: 6 (lower is better) Translates to: LAHLPVHGSGND*PPLLSQLFATL Trigger: AAGAGTGGCAAAAAGTTGGGAAAGAAGTGGAGGGCAGTCATTTCCCGAACCATGAACAGGAAGATGGGCAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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| CDS TCA 72 bp | GCCACTCTTCCCAGAATCCTCCGGGGTAAGAACACCTaGATCATCTTCTGGAATATTATCATCCAGGTTAAA | + |
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Preference number: 6 (lower is better) Translates to: ATLPRILRGKNT*IIFWNIIIQVK Trigger: TTTAACCTGGATGATAATATTCCAGAAGATGATTCAGGTGTTCTTACCCCGGAGGATTCTGGGAAGAGTGGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000033427.7 |
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