Pregenerated sensors for SASH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000015305Ensembl transcript IDs: ENSMUST00000015449.6, ENSMUST00000212553.2, ENSMUST00000212869.2
Found 286 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCCTAGCTAAGCCCATCGGGCTCGGGCATCGGGTGACCAACAGATaGGCAAGGGCACGATCAGACACGAGCCGGCTGCCTCGTCCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GLAKPIGLGHRVTNR*ARARSDTSRLPRPP Trigger: AGGAGGACGAGGCAGCCGGCTCGTGTCTGATCGTGCCCTTGCGCATCTGTTGGTCACCCGATGCCCGAGCCCGATGGGCTTAGCTAGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CCA 90 bp | TTTCCAATGCCAACCCCCACAACAGCATGTGACTGGGTCCTGGACTaGCAGAGAACCCTGCACCCCCACCCATTGGGTGGCCTATGCCTG | + |
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Preference number: 1 (lower is better) Translates to: FPMPTPTTACDWVLD*QRTLHPHPLGGLCL Trigger: CAGGCATAGGCCACCCAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGTTGTGGGGGTTGGCATTGGAAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 90 bp | TGTCTTGGCTCTTCAGTGCCTGAAAACGGAACTAAGTGCGTGTCTTaGCTTTGGGCATCAAAGAGAATCACCTCGATTTCCTCGAGGGGC | + |
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Preference number: 1 (lower is better) Translates to: CLGSSVPENGTKCVS*LWASKRITSISSRG Trigger: GCCCCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTTCAGGCACTGAAGAGCCAAGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 90 bp | AAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTaGAAATATGCAATATTTAACACCCAGCGGATGTGGTTTATCTGG | + |
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Preference number: 1 (lower is better) Translates to: KKRADHMEIKVGKTS*KYAIFNTQRMWFIW Trigger: CCAGATAAACCACATCCGCTGGGTGTTAAATATTGCATATTTTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | TGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATaGGGTGGCCTATGCCTGACCCTGGAAGCTAACCGTGAGCTCTTT | + |
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Preference number: 2 (lower is better) Translates to: CDWVLDWQRTLHPHP*GGLCLTLEANRELF Trigger: AAAGAGCTCACGGTTAGCTTCCAGGGTCAGGCATAGGCCACCCAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGTGCGTGTCTTGCCTTTaGGCATCAAAGAGAATCACC | + |
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Preference number: 2 (lower is better) Translates to: TACDWVLDWQRTLHPHPLCVSCL*ASKRIT Trigger: GGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCA...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACAGCACAAAGACAGACTaGACACACACTGTTTGTAGT | + |
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Preference number: 2 (lower is better) Translates to: GRLSANSHRQPRVSSESYSTKTD*THTVCS Trigger: ACTACAAACAGTGTGTGTCCAGTCTGTCTTTGTGCT...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR TCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGGTAGGCGAAGGGAAGTaGGGAAACCAAGCAATATTA | + |
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Preference number: 2 (lower is better) Translates to: TACDWVLDWQRTLHPHPLVGEGK*GNQAIL Trigger: TAATATTGCTTGGTTTCCTCACTTCCCTTCGCCTAC...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR GCA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCCACTACACACACACGTaGCCCTCTGTGAGTCCCGAT | + |
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Preference number: 2 (lower is better) Translates to: SSSLVTSDVTFARSLSLRHYTHT*PSVSPD Trigger: ATCGGGACTCACAGAGGGGCACGTGTGTGTGTAGTG...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGACAACAGCATGTGACTaGGTCCTGGACTGGCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: WAAAFSADSGDTPITHILTTACD*VLDWQR Trigger: TCTCTGCCAGTCCAGGACCCAGTCACATGCTGTTGT...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | GGGAACCTCACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTaGTGTTCCACCGCAGTTGTGAAACACACTACTCCGTGTCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: GNLTQSSHSSDLGIY*CSTAVVKHTTPCPG Trigger: TCCTGGACACGGAGTAGTGTGTTTCACAACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGTGAGGTTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | CGAGGTCTCTCTCTCTTCGCTCAGCTAAAATCAAAGGGCAGTCTGTaGCACGGTCAGGCCAGGGTTACTTCAAAAGCAAGAGAAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: RGLSLFAQLKSKGSL*HGQARVTSKAREEA Trigger: GGCTTCTTCTCTTGCTTTTGAAGTAACCCTGGCCTGACCGTGCAACAGACTGCCCTTTGATTTTAGCTGAGCGAAGAGAGAGAGACCTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR TCA 90 bp | GGGCCTTGTATTCAAAATGCTTCCACGATAACTGGAGACTTCACATCGTGCTTGACACCATGGCCACCGTaGCAGCCTCTCACAACACCA | + |
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Preference number: 2 (lower is better) Translates to: GPCIQNASTITGDFTSCLTPWPP*QPLTTP Trigger: TGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGT...CAAGCACGATGTGAAGTCTCCAGTTATCGTGGAAGCATTTTGAATACAAGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTAACTCCAGAGTCTGTTaGTTTGGCCTAGCTAAGCCC | + |
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Preference number: 2 (lower is better) Translates to: SQKISPPPWLPPMLLLRGNSRVC*FGLAKP Trigger: GGGCTTAGCTAGGCCAAAGCAACAGACTCTGGAGTT...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR TCA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGATGGCAGTCTAAGCTaGAAATCTGGAACTAGGGTT | + |
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Preference number: 2 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVDGSLS*KSGTRV Trigger: AACCCTAGTTCCAGATTTTCAGCTTAGACTGCCATC...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR GCA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTATTTCACATAAATACTaGAACACCATGGCCACCGTG | + |
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Preference number: 2 (lower is better) Translates to: SLVTSDVTFARSLSLRSAISHKY*NTMATV Trigger: CACGGTGGCCATGGTGTTGCAGTATTTATGTGAAAT...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | ACAGAATTTTTCGGGAACCTCACTCAGTCCTCACACAGCAGTGACTaGGGAATCTACTTGTGTTCCACCGCAGTTGTGAAACACACTACT | + |
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Preference number: 2 (lower is better) Translates to: TEFFGNLTQSSHSSD*GIYLCSTAVVKHTT Trigger: AGTAGTGTGTTTCACAACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGTGAGGTTCCCGAAAAATTCTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTGAATGGATTTGGGGATaGATGAGGTTAGGATTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SQKISPPPWLPPMLLLRGEWIWG*MRLGFH Trigger: GTGAAATCCTAACCTCATCCATCCCCAAATCCATTC...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTATATGCAACTTACAATaGCTTTCTGCAAAGGTGATC | + |
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Preference number: 2 (lower is better) Translates to: SLVTSDVTFARSLSLRSAICNLQ*LSAKVI Trigger: GATCACCTTTGCAGAAAGCCATTGTAAGTTGCATAT...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | ATGTCTCTGGTCGTTTATCTACAGGAGAGGAGGACCGTTCTGTTCTaGATAGAGTCAGCTGTTGTAGCTTTTGAACAAATGAGCATGGTC | + |
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Preference number: 2 (lower is better) Translates to: MSLVVYLQERRTVLF*IESAVVAFEQMSMV Trigger: GACCATGCTCATTTGTTCAAAAGCTACAACAGCTGACTCTATCAAGAACAGAACGGTCCTCCTCTCCTGTAGATAAACGACCAGAGACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CAA 90 bp | ATGAAAAGCTATTTGCTCTCAGTATCTGGGAATGTAAATAGTAGTTaGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCAC | + |
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Preference number: 2 (lower is better) Translates to: MKSYLLSVSGNVNSS*GSCFLCRQRRHTNH Trigger: GTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCAAACTACTATTTACATTCCCAGATACTGAGAGCAAATAGCTTTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCCTTGTATTCAAAATGCTTCCACGATAACTGGAGACTTCACATCGTGCTTGCTGATAGTTGATGAATaGATTTGGGGATGGATGAGG | + |
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Preference number: 2 (lower is better) Translates to: GPCIQNASTITGDFTSCLLIVDE*IWGWMR Trigger: CCTCATCCATCCCCAAATCCATTCATCAACTATCAG...CAAGCACGATGTGAAGTCTCCAGTTATCGTGGAAGCATTTTGAATACAAGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR GCA 90 bp | TTTATTAAGAGTCCAATAGGAACCCAGTGCCTTTACTCTTCTCATTCTAAACTGACTAAGTGCGTGTCTTaGCTTTGGGCATCAAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: FIKSPIGTQCLYSSHSKLTKCVS*LWASKR Trigger: TCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGT...CAGTTTAGAATGAGAAGAGTAAAGGCACTGGGTTCCTATTGGACTCTTAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR GCA 90 bp | TGGAAATTCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTCTTACAATGGCTTTCTaGAAAGGTGATCTGATAGTT | + |
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Preference number: 2 (lower is better) Translates to: WKFPKDFSSSLVTSDVTFLTMAF*KGDLIV Trigger: AACTATCAGATCACCTTTGCAGAAAGCCATTGTAAG...AAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGAATTTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAAAAAGGCTATTTTTGCTaGAAACATCCCAAACACGTT | + |
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Preference number: 2 (lower is better) Translates to: QTKRGQITWKSKLEKPVEKGYFC*KHPKHV Trigger: AACGTGTTTGGGATGTTTCCAGCAAAAATAGCCTTT...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 72 bp | CAGACACGAGCCGGCTGCCTCGTCCTCCTAGCCCTCTaGCAGCACAAAGACAGACTGGACACACACTGTTTG | + |
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Preference number: 3 (lower is better) Translates to: QTRAGCLVLLAL*QHKDRLDTHCL Trigger: CAAACAGTGTGTGTCCAGTCTGTCTTTGTGCTGTCAGAGGGCTAGGAGGACGAGGCAGCCGGCTCGTGTCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 72 bp | GGCCACTGTGACAGCCTCTCACTAAAGGCAGAAGACTaGAGGGCAGTCACTACACACACACGTGCCCCTCTG | + |
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Preference number: 3 (lower is better) Translates to: GHCDSLSLKAED*RAVTTHTRAPL Trigger: CAGAGGGGCACGTGTGTGTGTAGTGACTGCCCTTCAGTCTTCTGCCTTTAGTGAGAGGCTGTCACAGTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | CAGAGAACCCTGCACCCCCACCCATTGGGTGGCCTATaGCTGACCCTGGAAGCTAACCGTGAGCTCTTTATT | + |
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Preference number: 3 (lower is better) Translates to: QRTLHPHPLGGL*LTLEANRELFI Trigger: AATAAAGAGCTCACGGTTAGCTTCCAGGGTCAGGCATAGGCCACCCAATGGGTGGGGGTGCAGGGTTCTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 72 bp | GAACCCTGCACCCCCACCCATTGGGTGGCCTATGCCTaGCCCTGGAAGCTAACCGTGAGCTCTTTATTAAGA | + |
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Preference number: 3 (lower is better) Translates to: EPCTPTHWVAYA*PWKLTVSSLLR Trigger: TCTTAATAAAGAGCTCACGGTTAGCTTCCAGGGTCAGGCATAGGCCACCCAATGGGTGGGGGTGCAGGGTTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CAA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATGTGAGAGGCTGGCTCTaGTCTAGGGAGGGCCACGCC | + |
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Preference number: 3 (lower is better) Translates to: RSCETHYSVSRTLFSQKNVRGWL*SREGHA Trigger: GGCGTGGCCCTCCCTAGACAAGAGCCAGCCTCTCAC...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CAA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTTCAAAGGGCAGTCTGTaGCACGGTCAGGCCAGGGTT | + |
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Preference number: 3 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVSKGSL*HGQARV Trigger: AACCCTGGCCTGACCGTGCAACAGACTGCCCTTTGA...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | GCATGGTCAATAGTATACAGTAACTCCAGAGTCTGTTaGTTTGGCCTAGCTAAGCCCATCGGGCTCGGGCAT | + |
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Preference number: 3 (lower is better) Translates to: AWSIVYSNSRVC*FGLAKPIGLGH Trigger: ATGCCCGAGCCCGATGGGCTTAGCTAGGCCAAAGCAACAGACTCTGGAGTTACTGTATACTATTGACCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | GGCAGAAGACTGAAGGGCAGTCACTACACACACACGTaGCCCTCTGTGAGTCCCGATCGACTTTTACTAAAT | + |
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Preference number: 3 (lower is better) Translates to: GRRLKGSHYTHT*PSVSPDRLLLN Trigger: ATTTAGTAAAAGTCGATCGGGACTCACAGAGGGGCACGTGTGTGTGTAGTGACTGCCCTTCAGTCTTCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CCA 72 bp | GTGCCTGAAAACGGAACTAAGTGCGTGTCTTGCCTTTaGGCATCAAAGAGAATCACCTCGATTTCCTCGAGG | + |
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Preference number: 3 (lower is better) Translates to: VPENGTKCVSCL*ASKRITSISSR Trigger: CCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTTCAGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 72 bp | GTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGTaGAACACACTACTCCGTGTCCAGGACTCTTTTCTC | + |
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Preference number: 3 (lower is better) Translates to: VTWESTCVPPQL*NTLLRVQDSFL Trigger: GAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCGGTGGAACACAAGTAGATTCCCAAGTCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | TTGGGGATGGATGAGGTTAGGATTTCACATAAATACTaGAACACCATGGCCACCGTGACAGCCACTCACAAC | + |
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Preference number: 3 (lower is better) Translates to: LGMDEVRISHKY*NTMATVTATHN Trigger: GTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGCAGTATTTATGTGAAATCCTAACCTCATCCATCCCCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | TCTTCAGTGCCTGAAAACGGAACTAAGTGCGTGTCTTaGCTTTGGGCATCAAAGAGAATCACCTCGATTTCC | + |
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Preference number: 3 (lower is better) Translates to: SSVPENGTKCVS*LWASKRITSIS Trigger: GGAAATCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTTCAGGCACTGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | TGGACACACACTGTTTGTAGTGTCTTGGCTCTTCAGTaGCTGAAAACGGAACTAAGTGCGTGTCTTGCCTTT | + |
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Preference number: 3 (lower is better) Translates to: WTHTVCSVLALQ*LKTELSACLAF Trigger: AAAGGCAAGACACGCACTTAGTTCCGTTTTCAGGCACTGAAGAGCCAAGACACTACAAACAGTGTGTGTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | GGGAATGTAAATAGTAGTTTGGGCAGCTGCTTTCTCTaGAGACAGCGGAGACACACCAATCACACACATTCT | + |
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Preference number: 3 (lower is better) Translates to: GNVNSSLGSCFL*RQRRHTNHTHS Trigger: AGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCAAACTACTATTTACATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR GCA 72 bp | TCAGTATCTGGGAATGTAAATAGTAGTTTGGGCAGCTaGTTTCTCTGCAGACAGCGGAGACACACCAATCAC | + |
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Preference number: 3 (lower is better) Translates to: SVSGNVNSSLGS*FLCRQRRHTNH Trigger: GTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCAAACTACTATTTACATTCCCAGATACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR-3UTR CAA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATACTGTTTGTAGTGTCTaGGCTCTTCAGTGCCTGAAA | + |
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Preference number: 3 (lower is better) Translates to: RSCETHYSVSRTLFSQKNTVCSV*ALQCLK Trigger: TTTCAGGCACTGAAGAGCCAAGACACTACAAACAGT...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR TCA 72 bp | TCAAATTGTAATAACCCAAATGAACTAGCGGAGGACTaGTCCGGGCCTTGTATTCAAAATGCTTCCACGATA | + |
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Preference number: 3 (lower is better) Translates to: SNCNNPNELAED*SGPCIQNASTI Trigger: TATCGTGGAAGCATTTTGAATACAAGGCCCGGATCAGTCCTCCGCTAGTTCATTTGGGTTATTACAATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CCA 72 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATaGATTTGGGGATGGATGAGGTTAGGATTTCACATA | + |
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Preference number: 3 (lower is better) Translates to: MAFCKGDLIVDE*IWGWMRLGFHI Trigger: TATGTGAAATCCTAACCTCATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| 3UTR CCA 72 bp | TTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTaGGGATGGATGAGGTTAGGATTTCACATAAATACT | + |
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Preference number: 3 (lower is better) Translates to: FCKGDLIVDEWI*GWMRLGFHINT Trigger: AGTATTTATGTGAAATCCTAACCTCATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCATCCCGGAGGAAGGCCTaGGTTCCCGGGGAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSSRRKA*VPGERG Trigger: GCCCCTCTCCCCGGGAACCCAGGCCTTCCTCCGGGA...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GACAGCCACTCACAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCTGAGGCGGGGGAGCTaGGCATTCCATCGAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: DSHSQHHGHRDSHSQHHGLRRGS*AFHRAP Trigger: CGGGGCTCGATGGAATGCCCAGCTCCCCCGCCTCAG...GCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGTGAGTGGCTGTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACCTACCCCTTCTTTGGTaGCCAGGGGGTGGTGATCAT | + |
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Preference number: 4 (lower is better) Translates to: GRLSANSHRQPRVSSESYLPLLW*PGGGDH Trigger: ATGATCACCACCCCCTGGGCACCAAAGAAGGGGTAG...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCAGTCGGGACTGTGTCCTaGTCTCAGGGGCGCTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSVGTVS*SQGRSA Trigger: AGCAGAGCGCCCCTGAGACCAGGACACAGTCCCGAC...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACAGCCTCAGGGCTTGGTaGCAGTTTGAAGAGTCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSANSHRQPRVSSESYSLRAW*QFEESG Trigger: GCCAGACTCTTCAAACTGCCACCAAGCCCTGAGGCT...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTGGACCGCAGCTGAAGTaGCGTGGGGCTGGCGTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SLVTSDVTFARSLSLRSAGPQLK*RGAGVG Trigger: CCCGACGCCAGCCCCACGTCACTTCAGCTGCGGTCC...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGTCCAAGGTGGATGACTaGCGGTGCTGGGCCTCGTAT | + |
|
Preference number: 4 (lower is better) Translates to: TACDWVLDWQRTLHPHPLSKVDD*RCWASY Trigger: ATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGA...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCAGTAGGGCTCCTCAGTaGGATCAATGCCCTCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: NTMATVTASHNTMATVTASRAPQ*DQCPPP Trigger: AGGCGGAGGGCATTGATCTCACTGAGGAGCCCTACT...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCGGGAACCATCCAGGATaGCCATCACGTCGGTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: NTMATVTASHNTMATVTAGNHPG*PSRRSR Trigger: TCTGGACCGACGTGATGGGCATCCTGGATGGTTCCC...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCGCAGAGCCTTGGAGGTaGAGGCAGACGTCTTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSAEPWR*RQTSSA Trigger: CGCAGAAGACGTCTGCCTGCACCTCCAAGGCTCTGC...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCAGCAGCTGAAGTGACGTaGGGCTGGCGTCGGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSAAEVT*GWRRVS Trigger: AGAAACCCGACGCCAGCCCCACGTCACTTCAGCTGC...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GACAGCCACTCACAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCTCGTGGCAGAGCCTTaGAGGTGCAGGCAGACGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DSHSQHHGHRDSHSQHHGLVAEP*RCRQTS Trigger: AGACGTCTGCCTGCACCTCCAAGGCTCTGCCACGAG...GCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGTGAGTGGCTGTC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCCGTCTACCCCTTCTTTaGTGCCCAGGGGGTGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTMATVTASHNTMATVTARLPLL*CPGGGD Trigger: ATCACCACCCCCTGGGCACCAAAGAAGGGGTAGACG...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCACTGGGCTGGCAGGGCTaGCTTTCTTCAGTGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSLGWQG*LSSVAG Trigger: TCCTGCCACTGAAGAAAGCCAGCCCTGCCAGCCCAG...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGTCATTTCCCCCTCTGTaGGGGAGCGGGACACTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TACDWVLDWQRTLHPHPLSFPPL*GSGTLS Trigger: AGAAAGTGTCCCGCTCCCTCACAGAGGGGGAAATGA...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCGGAGTCAGGCTTTCCTaGGGCGGGGGAGCTGGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVTSDVTFARSLSLRGVRLS*GGGAGH Trigger: ATGCCCAGCTCCCCCGCCTCAGGAAAGCCTGACTCC...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCGGCTTGGTGGCAGTTTaGAGAGTCTGGCTGCCGTTA | + |
|
Preference number: 4 (lower is better) Translates to: NTMATVTASHNTMATVTAGLVAV*RVWLPL Trigger: TAACGGCAGCCAGACTCTTCAAACTGCCACCAAGCC...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACTGGAGGAATCAGTGGTaGTCACTGTCTGACCACTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSANSHRQPRVSSESYWRNQW*SLSDHS Trigger: TGAGTGGTCAGACAGTGAGCACCACTGATTCCTCCA...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGACCTCGTCCCAGCCTaGCCTCCTCTCCCTGCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: WAAAFSADSGDTPITHILDLVPA*PPLPAC Trigger: GCAAGCAGGGAGAGGAGGGCAGGCTGGGACGAGGTC...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCACAGGAAACCTTCCTaGTCAGCACTGGGCCCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSHRKPS*SALGPV Trigger: AACTGGGCCCAGTGCTGAGCAGGAAGGTTTCCTGTG...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCATCTCCCGGTTGCTGGTaGAGGAATCAGTGGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSSPGCW*RNQWCS Trigger: TGAGCACCACTGATTCCTCCACCAGCAACCGGGAGA...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGGGGACCCCGATAGGGTaGCTCTTCGTCATCCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GQLLSLQTAETHQSHTFWGTPIG*LFVIPI Trigger: GATGGGGATGACGAAGAGCCACCCTATCGGGGTCCC...CCAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGTCTTCAGTGGCAGGATaGGTGCCTCTGGGCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GQLLSLQTAETHQSHTFWSSVAG*VPLGWG Trigger: TCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGA...CCAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGGGTCTTCATAGCCATTaGACAGGAAGGTGGGCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TACDWVLDWQRTLHPHPLGLHSH*TGRWAC Trigger: ACATGCCCACCTTCCTGTTCAATGGCTATGAAGACC...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | GGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGCGTCCACTCAGGCCCTaGTTGTCCACCAGCAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GQLLSLQTAETHQSHTFWRPLRP*LSTSSF Trigger: AAAGCTGCTGGTGGACAACCAGGGCCTGAGTGGACG...CCAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTCAGGATGGGTGCCTCTaGGCTGGGGACCAAGTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: SLVTSDVTFARSLSLRSAQDGCL*AGDQVQ Trigger: CTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTG...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TTGGGCATCAAAGAGAATCACCTCGATTTCCTCGAGGGGCAGGGGAGGAGGGCTACCATCATCATCAGCTaGATCCGCTCCTCGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: LGIKENHLDFLEGQGRRATIIIS*IRSSSL Trigger: GAGTGACGAGGAGCGGATTCAGCTGATGATGATGGT...AGCCCTCCTCCCCTGCCCCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTCCCCGAGTCCTGCTCTaGGACCGGGCTGCTGTACTT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVPRVLL*DRAAVL Trigger: AAGTACAGCAGCCCGGTCTCAGAGCAGGACTCGGGG...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGCCCCATCTTCTGACTTaGCACTCTCCCGGTTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WAAAFSADSGDTPITHILPHLLT*HSPGCW Trigger: CCAGCAACCGGGAGAGTGTCAAGTCAGAAGATGGGG...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TACTGCAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGGTCATCCCCATCTTCTaGCTTGACACTCTCCCGGTT | + |
|
Preference number: 4 (lower is better) Translates to: YCNTMATVTATHNTMATVVIPIF*LDTLPV Trigger: AACCGGGAGAGTGTCAAGTCAGAAGATGGGGATGAC...CACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGCAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | GACAGCCACTCACAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCTTCCTCCAGGAGTTTaGAGGTGTCCAGGTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: DSHSQHHGHRDSHSQHHGLPPGV*RCPGLH Trigger: ATGAAGACCTGGACACCTTCAAACTCCTGGAGGAAG...GCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGTGAGTGGCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | TTGGGCATCAAAGAGAATCACCTCGATTTCCTCGAGGGGCAGGGGAGGAGGGCTACATCAGCATCTCCCTaGAGGTCATCCAGGGAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LGIKENHLDFLEGQGRRATSASP*RSSREW Trigger: CCATTCCCTGGATGACCTTCAGGGAGATGCTGATGT...AGCCCTCCTCCCCTGCCCCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | ACAGCATGTGACTGGGTCCTGGACTGGCAGAGAACCCTGCACCCCCACCCATTGTTTCCAAGTTCTCGCTaGTTTCGTAGCATCCGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TACDWVLDWQRTLHPHPLFPSSR*FRSIRS Trigger: ACTCCGGATGCTACGAAAGCAGCGAGAACTTGGAAA...CAATGGGTGGGGGTGCAGGGTTCTCTGCCAGTCCAGGACCCAGTCACATGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCAATGATGGAGATGGGGTaGGAGAGTCTGCATCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSMMEMG*ESLHHL Trigger: AAGATGATGCAGACTCTCTCACCCCATCTCCATCAT...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCATGGTCTCTTTCACTaGTCTCACCTTTTTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSHGLFH*SHLFPE Trigger: CTCGGGAAAAAGGTGAGATCAGTGAAAGAGACCATG...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | GACAGCCACTCACAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCAGAACGCTGGGTTTGTaGGTTTTGGCGTTTTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: DSHSQHHGHRDSHSQHHGRTLGL*VLAFSK Trigger: CTTGGAAAACGCCAAAACTCACAAACCCAGCGTTCT...GCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGTGAGTGGCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | GACAGCCACTCACAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCTGGCTGACTCCTGGTaGAAGACTTTAAGTTGGACT | + |
|
Preference number: 4 (lower is better) Translates to: DSHSQHHGHRDSHSQHHGLADSW*KTLSWT Trigger: AGTCCAACTTAAAGTCTTTCACCAGGAGTCAGCCAG...GCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGTGAGTGGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCTGGGGTGAGAGAGTCTaGATCATCTTCTGGAGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSWGERV*IIFWRF Trigger: AAACCTCCAGAAGATGATGCAGACTCTCTCACCCCA...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGAGAGAGGGGCTTTCTaGAGATTTCCGTCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WAAAFSADSGDTPITHILERGAF*RFPSAH Trigger: GTGGGCTGACGGAAATCTGCAGAAAGCCCCTCTCTC...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATGTGATGCCGGCCTCCTaGAGGCAAGAGTGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCETHYSVSRTLFSQKNVMPAS*RQEWDR Trigger: CCTGTCCCACTCTTGCCTTCAGGAGGCCGGCATCAC...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGACTGCTCTCTTGAGTTaGAGGTGGAGGAGCCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: WAAAFSADSGDTPITHILTALLS*RWRSHP Trigger: TGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGT...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | AAAACGGAACTAAGTGCGTGTCTTGCCTTTGGGCATCAAAGAGAATCACCTCGAGGGGTGAAGTCAGTGTaGACTCGGGCACGCCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: KTELSACLAFGHQRESPRGVKSV*TRARPQ Trigger: CTGTGGGCGTGCCCGAGTGCACACTGACTTCACCCC...TCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTTCCACATCCAGGTCCTaGGAAACGCGCCGTTTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SQKISPPPWLPPMLLLRGSTSRS*ETRRFR Trigger: CCGGAAACGGCGCGTTTCCCAGGACCTGGATGTGGA...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGAAGTGACGTGGGGCTaGCGTCGGGTTTCTCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVEVTWG*RRVSPH Trigger: ATGTGGAGAAACCCGACGCCAGCCCCACGTCACTTC...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTTCGGCTTTTCTTGGCTaGCACAGGAGGGGGCTGCGA | + |
|
Preference number: 4 (lower is better) Translates to: SQKISPPPWLPPMLLLRGSAFLG*HRRGLR Trigger: TCGCAGCCCCCTCCTGTGCCAGCCAAGAAAAGCCGA...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | TGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGTCTGGTCCATGTTGGTaGCAACATCCCTCTCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WAAAFSADSGDTPITHILSGPCW*QHPSQA Trigger: AGCCTGAGAGGGATGTTGCCACCAACATGGACCAGA...CAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CCA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCGGATCTGGTCCATGTTaGTGGCAACATCCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVTSDVTFARSLSLRGSGPC*WQHPSQ Trigger: CTGAGAGGGATGTTGCCACCAACATGGACCAGATCC...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR TCA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGATCTGGGACCGCAGCTaGAGTGACGTGGGGCTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMIWDRS*SDVGLA Trigger: CGCCAGCCCCACGTCACTTCAGCTGCGGTCCCAGAT...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR GCA 90 bp | CATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCCTCTCAGAGTTTACCAGCTTGTaGAACCTCTTAAACTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: HGHRDSHSQHHGHCDSLSEFTSL*NLLNFT Trigger: GGTGAAGTTTAAGAGGTTGCACAAGCTGGTAAACTC...TGAGAGGCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | TTGGGCATCAAAGAGAATCACCTCGATTTCCTCGAGGGGCAGGGGAGGAGGGCTCACTCCAGAGTAGAGTaGAGATCTTTCATCTTGGAC | + |
|
Preference number: 4 (lower is better) Translates to: LGIKENHLDFLEGQGRRAHSRVE*RSFILD Trigger: GTCCAAGATGAAAGATCTGCACTCTACTCTGGAGTG...AGCCCTCCTCCCCTGCCCCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCTTATTACTGCCAACATaGAGAGAACGGTTTGTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSLLLPT*RERFVR Trigger: CCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAA...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCACATCCTCTTCCTCATaGTCTCTTTCACTGATCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSTSSSS*SLSLIS Trigger: TGAGATCAGTGAAAGAGACCATGAGGAAGAGGATGT...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | AAAACGGAACTAAGTGCGTGTCTTGCCTTTGGGCATCAAAGAGAATCACCTCGACCCACGTATCCAGGCTaGTGGATGATGGAGATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KTELSACLAFGHQRESPRPTYPG*WMMEMG Trigger: CCCCATCTCCATCATCCAGCAGCCTGGATACGTGGG...TCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAAGGGCTGGGGACCAAGTaGAGGCCATTGGCCAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVEGLGTK*RPLARR Trigger: GCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCC...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTAGACTTCGGCTGAGATaGTCTTCCCTTCTTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLVTSDVTFARSLSLRSARLRLR*SSLLPP Trigger: AGGAGGAAGAAGGGAAGACCATCTCAGCCGAAGTCT...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TTAACACCCAGCGGATGTGGTTTATCTGGCTCCATAATGAACCTTTGCTTGAATGCATCCGGAGTCTCGTaGGGATCGTCCACTCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTPSGCGLSGSIMNLCLNASGVS*GSSTQA Trigger: GGCCTGAGTGGACGATCCCCACGAGACTCCGGATGC...ATTCAAGCAAAGGTTCATTATGGAGCCAGATAAACCACATCCGCTGGGTGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | TACTGCAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGCACATCTTCTCCTTTTaGAGTCTGTCTCATTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: YCNTMATVTATHNTMATVHIFSF*SLSHYS Trigger: GGAATAATGAGACAGACTTCAAAAGGAGAAGATGTG...CACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATGTGGTGCTCACTGTCTaGCCACTCATTGAGCTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSCETHYSVSRTLFSQKNVVLTV*PLIELW Trigger: CCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCAC...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATACCAGCAGCTTTTCCTaGGAACCGGACTGGTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: RSCETHYSVSRTLFSQKNTSSFS*EPDWSL Trigger: CAGTGACCAGTCCGGTTCTCAGGAAAAGCTGCTGGT...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | AAAACGGAACTAAGTGCGTGTCTTGCCTTTGGGCATCAAAGAGAATCACCTCGAGTGCCCAGGGGGTGGTaGTCATGTCCTTTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KTELSACLAFGHQRESPRVPRGW*SCPFLR Trigger: TCTCAGAAAAGGACATGATCACCACCCCCTGGGCAC...TCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCATCTGCATACTGCTGTaGCAGGTCATCAATGTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVTSDVTFARSLSLRICILL*QVINVS Trigger: GGAAACATTGATGACCTGGCACAGCAGTATGCAGAT...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCGCAGTCAGAAGAACTaGTCTGTGTTCTGGGTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: SQKISPPPWLPPMLLLRGRSQKN*SVFWVP Trigger: AGGGACCCAGAACACAGAGCAGTTCTTCTGACTGCG...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCTCTGAGTTTGATTTATaGAGAGGGTACTTTCTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSSEFDL*RGYFLS Trigger: GGAAAGAAAGTACCCTCTCCATAAATCAAACTCAGA...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTTGGTGGAGGAATCAGTaGTGCTCACTGTCTGACCAC | + |
|
Preference number: 4 (lower is better) Translates to: SQKISPPPWLPPMLLLRGWWRNQ*CSLSDH Trigger: GTGGTCAGACAGTGAGCACCACTGATTCCTCCACCA...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| 3UTR CAA 72 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTaGTGTTCCACCGCAGTTGTGAAACACACTACTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TQSSHSSDLGIY*CSTAVVKHTTP Trigger: CGGAGTAGTGTGTTTCACAACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| 3UTR CAA 72 bp | TTCGGGAACCTCACTCAGTCCTCACACAGCAGTGACTaGGGAATCTACTTGTGTTCCACCGCAGTTGTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FGNLTQSSHSSD*GIYLCSTAVVK Trigger: TTTCACAACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGTGAGGTTCCCGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | TTAACACCCAGCGGATGTGGTTTATCTGGCTCCATAATGAACCTTTGCTTGAATTTCCACTTCTGGTGTTaGCACGGCGCTGCAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTPSGCGLSGSIMNLCLNFHFWC*HGAAEA Trigger: GGCTTCTGCAGCGCCGTGTCAACACCAGAAGTGGAA...ATTCAAGCAAAGGTTCATTATGGAGCCAGATAAACCACATCCGCTGGGTGTTAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | AAAACGGAACTAAGTGCGTGTCTTGCCTTTGGGCATCAAAGAGAATCACCTCGATCCACAGACTTCGGCTaGGATGGTCTTCCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KTELSACLAFGHQRESPRSTDFG*DGLPFF Trigger: GAAGAAGGGAAGACCATCTCAGCCGAAGTCTGTGGA...TCGAGGTGATTCTCTTTGATGCCCAAAGGCAAGACACGCACTTAGTTCCGTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGCCTCCTCTCCCTGCTTaGGCACCTCCCCTGATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMPPLPA*APPLIS Trigger: TGAAATCAGGGGAGGTGCGCAAGCAGGGAGAGGAGG...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGTTCACACCATGCTCCTaGAGGCTAGTGCTCTCGGGC | + |
|
Preference number: 4 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMFTPCS*RLVLSG Trigger: GCCCGAGAGCACTAGCCTGCAGGAGCATGGTGTGAA...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | GGGCCTTGTATTCAAAATGCTTCCACGATAACTGGAGACTTCACATCGTGCTTGTGTGTTCTTTCAGGTTaGTCCGGTCCAGGAGATCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPCIQNASTITGDFTSCLCVLSG*SGPGDP Trigger: AGGATCTCCTGGACCGGATCAACCTGAAAGAACACA...CAAGCACGATGTGAAGTCTCCAGTTATCGTGGAAGCATTTTGAATACAAGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATGATCATGTCCTTTTCTaGGACCCTCAAGAGACGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RSCETHYSVSRTLFSQKNDHVLF*DPQETS Trigger: GGACGTCTCTTGAGGGTCTCAGAAAAGGACATGATC...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCGCCATCATAGAAAAATaGCTTTTTGTGCACTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SSSLVTSDVTFARSLSLRAIIEK*LFVHSR Trigger: TCTGGAGTGCACAAAAAGCCATTTTTCTATGATGGC...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | TTAACACCCAGCGGATGTGGTTTATCTGGCTCCATAATGAACCTTTGCTTGAATTGTCTGACCACTCATTaGGCTCTGGCCACTCAGAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTPSGCGLSGSIMNLCLNCLTTH*ALATQR Trigger: TCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACA...ATTCAAGCAAAGGTTCATTATGGAGCCAGATAAACCACATCCGCTGGGTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGCTCTTGAGTTGCAGGTaGAGGAGCCATCCAATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMLLSCR*RSHPMS Trigger: CGACATTGGATGGCTCCTCCACCTGCAACTCAAGAG...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAATTCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGAGCGGGACACTTTCTaGGCCTTCTCTTCTTCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: WKFPKDFSSSLVTSDVTFERDTF*AFSSSG Trigger: TCCAGAAGAAGAGAAGGCCCAGAAAGTGTCCCGCTC...AAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGAATTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAACACTCTCCCGGTTGCTaGTGGAGGAATCAGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVEHSPGC*WRNQWC Trigger: GCACCACTGATTCCTCCACCAGCAACCGGGAGAGTG...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAAGAGCTATCCCAAGGTTaGAGGCCACCACGGAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVEELSQG*RPPRSH Trigger: ATGGCTCCGTGGTGGCCTCCAACCTTGGGATAGCTC...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TTAACACCCAGCGGATGTGGTTTATCTGGCTCCATAATGAACCTTTGCTTGAATAGCTTCACCCGGATCTaGTCCATGTTGGTGGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: LTPSGCGLSGSIMNLCLNSFTRI*SMLVAT Trigger: TGTTGCCACCAACATGGACCAGATCCGGGTGAAGCT...ATTCAAGCAAAGGTTCATTATGGAGCCAGATAAACCACATCCGCTGGGTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| 3UTR CAA 72 bp | ACAAAGACAGACTGGACACACACTGTTTGTAGTGTCTaGGCTCTTCAGTGCCTGAAAACGGAACTAAGTGCG | + |
|
Preference number: 4 (lower is better) Translates to: TKTDWTHTVCSV*ALQCLKTELSA Trigger: CGCACTTAGTTCCGTTTTCAGGCACTGAAGAGCCAAGACACTACAAACAGTGTGTGTCCAGTCTGTCTTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| 3UTR CAA 72 bp | ATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTaGCGAGGTCTCTCTCTCTTCGCTCAGCTAAAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ISPPPWLPPMLL*RGLSLFAQLKS Trigger: TGATTTTAGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGCAGATCTTTCATCTTaGACTGGGGAATTCTCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVADLSS*TGEFSN Trigger: ATTTGAGAATTCCCCAGTCCAAGATGAAAGATCTGC...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAAAGGTCATCCAGGGAATaGGATCGGGGCCAACTTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVERSSRE*DRGQLS Trigger: GGAAAGTTGGCCCCGATCCCATTCCCTGGATGACCT...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TGGAAATTCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTCATAGCCTCAGGGCTTaGTGGCAGTTTGAAGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: WKFPKDFSSSLVTSDVTFHSLRA*WQFEES Trigger: AGACTCTTCAAACTGCCACCAAGCCCTGAGGCTATG...AAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGAATTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| 3UTR CAA 72 bp | TATTTGCTCTCAGTATCTGGGAATGTAAATAGTAGTTaGGGCAGCTGCTTTCTCTGCAGACAGCGGAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: YLLSVSGNVNSS*GSCFLCRQRRH Trigger: GTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCCAAACTACTATTTACATTCCCAGATACTGAGAGCAAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | TTTATTAAGAGTCCAATAGGAACCCAGTGCCTTTACTCTTCTCATTCTAAACTGCTTCCTGCTCAGCACTaGGCCCAGTTTCACACCATG | + |
|
Preference number: 4 (lower is better) Translates to: FIKSPIGTQCLYSSHSKLLPAQH*AQFHTM Trigger: CATGGTGTGAAACTGGGCCCAGTGCTGAGCAGGAAG...CAGTTTAGAATGAGAAGAGTAAAGGCACTGGGTTCCTATTGGACTCTTAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | TTTATTAAGAGTCCAATAGGAACCCAGTGCCTTTACTCTTCTCATTCTAAACTGGTGTTGACACGGCGCTaGAGAAGCCTAGAGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FIKSPIGTQCLYSSHSKLVLTRR*RSLETL Trigger: AAGAGTCTCTAGGCTTCTGCAGCGCCGTGTCAACAC...CAGTTTAGAATGAGAAGAGTAAAGGCACTGGGTTCCTATTGGACTCTTAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR TCA 90 bp | TTTATTAAGAGTCCAATAGGAACCCAGTGCCTTTACTCTTCTCATTCTAAACTGGTCTGGCTGCCGTTATaGGTTTCCTTATGTGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FIKSPIGTQCLYSSHSKLVWLPL*VSLCVS Trigger: AGAGACACATAAGGAAACTCATAACGGCAGCCAGAC...CAGTTTAGAATGAGAAGAGTAAAGGCACTGGGTTCCTATTGGACTCTTAATAAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAATGGGTTTGTGAGTTTTaGCGTTTTCCAAGTTCTCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVEWVCEF*RFPSSR Trigger: GCGAGAACTTGGAAAACGCCAAAACTCACAAACCCA...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR GCA 90 bp | CAGACAAAAAGAGGGCAGATCACATGGAAATCAAAGTTGGAAAAACCAGTTGAAGGTATTGTAATAATCTaGATACTGCTGTGCCAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTKRGQITWKSKLEKPVEGIVII*ILLCQV Trigger: GACCTGGCACAGCAGTATGCAGATTATTACAATACC...TTCAACTGGTTTTTCCAACTTTGATTTCCATGTGATCTGCCCTCTTTTTGTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | GGAACCATCCAGGATGCCCATCACGTCGGTCCAGAGGCGGGAGATTaGCTCGGAGACACCGGCCTCGGGCTCCAGCTCCCGGGCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: GTIQDAHHVGPEAGD*LGDTGLGLQLPGGI Trigger: GATCCCGCCCGGGAGCTGGAGCCCGAGGCCGGTGTCTCCGAGTCAATCTCCCGCCTCTGGACCGACGTGATGGGCATCCTGGATGGTTCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | ATGCTCCTGCAGGCTAGTGCTCTCGGGCAGCTCAGCCAGCCAGGGTaGAGGTCTCGTACAGGCTGGGCTGCCCGGCTCAGTCCCGGAGGA | + |
|
Preference number: 5 (lower is better) Translates to: MLLQASALGQLSQPG*RSRTGWAARLSPGG Trigger: TCCTCCGGGACTGAGCCGGGCAGCCCAGCCTGTACGAGACCTCCACCCTGGCTGGCTGAGCTGCCCGAGAGCACTAGCCTGCAGGAGCAT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | TGGGCTGGCAGGGCTGGCTTTCTTCAGTGGCAGGATGGGTGCCTCTaGGCTGGGGACCAAGTGCAGGCCATTGGCCAGGCGCTCTCGGCT | + |
|
Preference number: 5 (lower is better) Translates to: WAGRAGFLQWQDGCL*AGDQVQAIGQALSA Trigger: AGCCGAGAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCAGCCCTGCCAGCCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | TGTCGGGTAGGAGCCATCGGGCCAGTCTGCGGGGTCCAAGGTGGATaGCTGACGGTGCTGGGCCTCGTATTCCTTCAGCCTGGCGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: CRVGAIGPVCGVQGG*LTVLGLVFLQPGER Trigger: GCGCTCGCCAGGCTGAAGGAATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGACCCCGCAGACTGGCCCGATGGCTCCTACCCGACA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 90 bp | ACTGACTGGGCTGGCAGGGCTGGCTTTCTTCAGTGGCAGGATGGGTaGCTCTGGGCTGGGGACCAAGTGCAGGCCATTGGCCAGGCGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TDWAGRAGFLQWQDG*LWAGDQVQAIGQAL Trigger: GAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCAGCCCTGCCAGCCCAGTCAGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | GCTTGTCCACGTGTTCGGAGTCAGGCTTTCCTGAGGCGGGGGAGCTaGGCATTCCATCGAGCCCCGAGTCCTGCTCTGAGACCGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ACPRVRSQAFLRRGS*AFHRAPSPALRPGC Trigger: GCAGCCCGGTCTCAGAGCAGGACTCGGGGCTCGATGGAATGCCCAGCTCCCCCGCCTCAGGAAAGCCTGACTCCGAACACGTGGACAAGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | CATCCTCCTCCAGCAAGCACCGCCTCAGGTCCTGCTTCTCCACCTTaGTCAGCGTCCTGTCCGAGGCAGGACGCACGAGCTGGGTCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPPPASTASGPASPP*SASCPRQDARAGSG Trigger: ACCTGACCCAGCTCGTGCGTCCTGCCTCGGACAGGACGCTGAGCAAGGTGGAGAAGCAGGACCTGAGGCGGTGCTTGCTGGAGGAGGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
||
| CDS CCA 90 bp | GCAGTCGCTGGGACTGACTGGGCTGGCAGGGCTGGCTTTCTTCAGTaGCAGGATGGGTGCCTCTGGGCTGGGGACCAAGTGCAGGCCATT | + |
|
Preference number: 5 (lower is better) Translates to: AVAGTDWAGRAGFLQ*QDGCLWAGDQVQAI Trigger: AATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCAGCCCTGCCAGCCCAGTCAGTCCCAGCGACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | CCTGCCAGCGAAGCCGCAGCCACTGCCACCCTTGGGCTTGGGCCGTaGCAGCAGGTCACAGGTGCTGCCATTTACTCCTTTTCTGGAGGG | + |
|
Preference number: 5 (lower is better) Translates to: PASEAAATATLGLGP*QQVTGAAIYSFSGG Trigger: CCCTCCAGAAAAGGAGTAAATGGCAGCACCTGTGACCTGCTGCCACGGCCCAAGCCCAAGGGTGGCAGTGGCTGCGGCTTCGCTGGCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
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| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACCCCTCCTCTCCCTGCTaGCGCACCTCCCCTGATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYPSSPC*RTSPDF Trigger: GAAATCAGGGGAGGTGCGCAAGCAGGGAGAGGAGGG...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | CTCTTTGCCTCCTCATCCTCCTCCAGCAAGCACCGCCTCAGGTCCTaGTTCTCCACCTTGCTCAGCGTCCTGTCCGAGGCAGGACGCACG | + |
|
Preference number: 5 (lower is better) Translates to: LFASSSSSSKHRLRS*FSTLLSVLSEAGRT Trigger: CGTGCGTCCTGCCTCGGACAGGACGCTGAGCAAGGTGGAGAAGCAGGACCTGAGGCGGTGCTTGCTGGAGGAGGATGAGGAGGCAAAGAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
||
| CDS CCA 90 bp | CCAATGTCGGGTAGGAGCCATCGGGCCAGTCTGCGGGGTCCAAGGTaGATGACTGACGGTGCTGGGCCTCGTATTCCTTCAGCCTGGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PMSGRSHRASLRGPR*MTDGAGPRIPSAWR Trigger: TCGCCAGGCTGAAGGAATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGACCCCGCAGACTGGCCCGATGGCTCCTACCCGACATTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | TGGCAGGGCTGGCTTTCTTCAGTGGCAGGATGGGTGCCTCTGGGCTaGGGACCAAGTGCAGGCCATTGGCCAGGCGCTCTCGGCTTTTCT | + |
|
Preference number: 5 (lower is better) Translates to: WQGWLSSVAGWVPLG*GPSAGHWPGALGFS Trigger: AGAAAAGCCGAGAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCAGCCCTGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | ACGGCGCTGCAGAAGCCTAGAGACTCTTCGATCTGGGACCGCAGCTaGAGTGACGTGGGGCTGGCGTCGGGTTTCTCCACATCCAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: TALQKPRDSSIWDRS*SDVGLASGFSTSRS Trigger: GGACCTGGATGTGGAGAAACCCGACGCCAGCCCCACGTCACTTCAGCTGCGGTCCCAGATCGAAGAGTCTCTAGGCTTCTGCAGCGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | GGCTTTGAGCTTAGGCTTGTCCACGTGTTCGGAGTCAGGCTTTCCTaGGGCGGGGGAGCTGGGCATTCCATCGAGCCCCGAGTCCTGCTC | + |
|
Preference number: 5 (lower is better) Translates to: GFELRLVHVFGVRLS*GGGAGHSIEPRVLL Trigger: GAGCAGGACTCGGGGCTCGATGGAATGCCCAGCTCCCCCGCCTCAGGAAAGCCTGACTCCGAACACGTGGACAAGCCTAAGCTCAAAGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | GCTTTCTTCAGTGGCAGGATGGGTGCCTCTGGGCTGGGGACCAAGTaGAGGCCATTGGCCAGGCGCTCTCGGCTTTTCTTGGCTGGCACA | + |
|
Preference number: 5 (lower is better) Translates to: AFFSGRMGASGLGTK*RPLARRSRLFLAGT Trigger: TGTGCCAGCCAAGAAAAGCCGAGAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 90 bp | GAAACCTTCCTGCTCAGCACTGGGCCCAGTTTCACACCATGCTCCTaGAGGCTAGTGCTCTCGGGCAGCTCAGCCAGCCAGGGTGGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: ETFLLSTGPSFTPCS*RLVLSGSSASQGGG Trigger: ACCTCCACCCTGGCTGGCTGAGCTGCCCGAGAGCACTAGCCTGCAGGAGCATGGTGTGAAACTGGGCCCAGTGCTGAGCAGGAAGGTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACCATCCGACTGCTCTCTaGAGTTGCAGGTGGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYHPTAL*SCRWRS Trigger: GCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATG...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACGGGCTTGGTGGCAGTTaGAAGAGTCTGGCTGCCGTT | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYGLGGS*KSLAAV Trigger: AACGGCAGCCAGACTCTTCAAACTGCCACCAAGCCC...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | CCTGAAGGCAAGAGTGGGACAGGGAAGGCACTTGGCTCAGCGTGCTaGACCCTGCGTCAGAAAGGGTGCTCGTGTACATGGGCAGGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PEGKSGTGKALGSAC*TLRQKGCSCTWAGR Trigger: TCGGCCTGCCCATGTACACGAGCACCCTTTCTGACGCAGGGTTCAGCACGCTGAGCCAAGTGCCTTCCCTGTCCCACTCTTGCCTTCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACTTGAACGTGCCGACTTaGTTGTTCAGCAGGCCCATC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYLNVPT*LFSRPI Trigger: GATGGGCCTGCTGAACAACAAAGTCGGCACGTTCAA...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | AACCCTTTTAGTACAGCGGTCCACCGTGGCAGCCCACTTCCTCTTTaGCTCCTCATCCTCCTCCAGCAAGCACCGCCTCAGGTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: NPFSTAVHRGSPLPL*LLILLQQAPPQVLL Trigger: AAGCAGGACCTGAGGCGGTGCTTGCTGGAGGAGGATGAGGAGGCAAAGAGGAAGTGGGCTGCCACGGTGGACCGCTGTACTAAAAGGGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
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| CDS CCA 90 bp | CCGAGTCCTCTGTCTCATCATCCGACTGCTCTCTTGAGTTGCAGGTaGAGGAGCCATCCAATGTCGGGTAGGAGCCATCGGGCCAGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PSPLSHHPTALLSCR*RSHPMSGRSHRASL Trigger: CAGACTGGCCCGATGGCTCCTACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACTCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | CAGGTTGATCCGGTCCAGGAGATCCTCCACAGACTTCGGCTGAGATaGTCTTCCCTTCTTCCTCCTCCTGGTAGGGCGCTTGGGCTTCTC | + |
|
Preference number: 5 (lower is better) Translates to: QVDPVQEILHRLRLR*SSLLPPPGRALGLL Trigger: GAGAAGCCCAAGCGCCCTACCAGGAGGAGGAAGAAGGGAAGACCATCTCAGCCGAAGTCTGTGGAGGATCTCCTGGACCGGATCAACCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | GGGATCGCCATCCGATGTTGCTTCCGAAGCAGCTTCACCCGGATCTaGTCCATGTTGGTGGCAACATCCCTCTCAGGCTGCTCTAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: GIAIRCCFRSSFTRI*SMLVATSLSGCSRS Trigger: GGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGATGGCGATCCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACATGTGTTCTTTCAGGTaGATCCGGTCCAGGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYMCSFR*IRSRRS Trigger: GGATCTCCTGGACCGGATCAACCTGAAAGAACACAT...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | AGGGACCCCGATAGGGTGGCTCTTCGTCATCCCCATCTTCTGACTTaGCACTCTCCCGGTTGCTGGTGGAGGAATCAGTGGTGCTCACTG | + |
|
Preference number: 5 (lower is better) Translates to: RDPDRVALRHPHLLT*HSPGCWWRNQWCSL Trigger: CAGTGAGCACCACTGATTCCTCCACCAGCAACCGGGAGAGTGTCAAGTCAGAAGATGGGGATGACGAAGAGCCACCCTATCGGGGTCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | TCTTTCAGGTTGATCCGGTCCAGGAGATCCTCCACAGACTTCGGCTaGGATGGTCTTCCCTTCTTCCTCCTCCTGGTAGGGCGCTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SFRLIRSRRSSTDFG*DGLPFFLLLVGRLG Trigger: GCCCAAGCGCCCTACCAGGAGGAGGAAGAAGGGAAGACCATCTCAGCCGAAGTCTGTGGAGGATCTCCTGGACCGGATCAACCTGAAAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | ACTTCACCGAGTCCTCTGTCTCATCATCCGACTGCTCTCTTGAGTTaGAGGTGGAGGAGCCATCCAATGTCGGGTAGGAGCCATCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TSPSPLSHHPTALLS*RWRSHPMSGRSHRA Trigger: GGCCCGATGGCTCCTACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACTCGGTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | TTCACCCGGATCTGGTCCATGTTGGTGGCAACATCCCTCTCAGGCTaGTCTAGGTCCTCTGCGTATCTCTGTACCAGGGCTTCCGGGATC | + |
|
Preference number: 5 (lower is better) Translates to: FTRIWSMLVATSLSG*SRSSAYLCTRASGI Trigger: GATCCCGGAAGCCCTGGTACAGAGATACGCAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | GGCGTTTTCCAAGTTCTCGCTGCTTTCGTAGCATCCGGAGTCTCGTaGGGATCGTCCACTCAGGCCCTGGTTGTCCACCAGCAGCTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVFQVLAAFVASGVS*GSSTQALVVHQQLF Trigger: GAAAAGCTGCTGGTGGACAACCAGGGCCTGAGTGGACGATCCCCACGAGACTCCGGATGCTACGAAAGCAGCGAGAACTTGGAAAACGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | TTCGGTTTTTACTCAAATCAGTCACAGAGGGCACGTCACAGCTCTTaGCAGTGTCCGGGGCTAGACCTCGTCCCAGCCTGCCCTCCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FGFYSNQSQRARHSS*QCPGLDLVPACPPL Trigger: GAGAGGAGGGCAGGCTGGGACGAGGTCTAGCCCCGGACACTGCCAAGAGCTGTGACGTGCCCTCTGTGACTGATTTGAGTAAAAACCGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | GGTCGGAAAATCTCTTGCTTTGGGTCAGAAGCATCACATCTGCTGTaGGATCTCGGCCTCGTGGCAGAGCCTTGGAGGTGCAGGCAGACG | + |
|
Preference number: 5 (lower is better) Translates to: GRKISCFGSEASHLL*DLGLVAEPWRCRQT Trigger: CGTCTGCCTGCACCTCCAAGGCTCTGCCACGAGGCCGAGATCCCACAGCAGATGTGATGCTTCTGACCCAAAGCAAGAGATTTTCCGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCCAGAGGCGGGAGATaGACTCGGAGACACCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVTSDVTFARSLSLRSRGGR*TRRHRP Trigger: AGGCCGGTGTCTCCGAGTCAATCTCCCGCCTCTGGA...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | ACAGAAGGGACCCCGATAGGGTGGCTCTTCGTCATCCCCATCTTCTaGCTTGACACTCTCCCGGTTGCTGGTGGAGGAATCAGTGGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TEGTPIGWLFVIPIF*LDTLPVAGGGISGA Trigger: AGCACCACTGATTCCTCCACCAGCAACCGGGAGAGTGTCAAGTCAGAAGATGGGGATGACGAAGAGCCACCCTATCGGGGTCCCTTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | GTTATGAGTTTCCTTATGTGTCTCTCCTCGGTGATGCCGGCCTCCTaGAGGCAAGAGTGGGACAGGGAAGGCACTTGGCTCAGCGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: VMSFLMCLSSVMPAS*RQEWDREGTWLSVL Trigger: CAGCACGCTGAGCCAAGTGCCTTCCCTGTCCCACTCTTGCCTTCAGGAGGCCGGCATCACCGAGGAGAGACACATAAGGAAACTCATAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | GGGGCCAACTTTCCACAGGCTCAGGACCCTCCAGGGTTTCACAGCTaGGACAGATGGAGACCGGGAGGCTCCTTCGGTTTTTACTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: GANFPQAQDPPGFHS*DRWRPGGSFGFYSN Trigger: ATTTGAGTAAAAACCGAAGGAGCCTCCCGGTCTCCATCTGTCGCAGCTGTGAAACCCTGGAGGGTCCTGAGCCTGTGGAAAGTTGGCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 90 bp | TCCGATGTTGCTTCCGAAGCAGCTTCACCCGGATCTGGTCCATGTTaGTGGCAACATCCCTCTCAGGCTGCTCTAGGTCCTCTGCGTATC | + |
|
Preference number: 5 (lower is better) Translates to: SDVASEAASPGSGPC*WQHPSQAALGPLRI Trigger: GATACGCAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCCTCCTGGTAGGGCGCTaGGGCTTCTCCTCTTCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVTSDVTFARSLSLRLLVGR*GFSSSS Trigger: TGAGGAAGAGGAGAAGCCCAAGCGCCCTACCAGGAG...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCTCTTCCTCCAGGAGTTaGAAGGTGTCCAGGTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: NTMATVTASHNTMATVTASSSRS*KVSRSS Trigger: TGAAGACCTGGACACCTTCAAACTCCTGGAGGAAGA...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | GGCCGCCTGTCCGCTAACAGCCACAGGCAGCCCCGAGTCTCCTCAGAGTCATACGGAAAATCTCTTGCTTaGGGTCAGAAGCATCACATC | + |
|
Preference number: 5 (lower is better) Translates to: GRLSANSHRQPRVSSESYGKSLA*GQKHHI Trigger: GATGTGATGCTTCTGACCCAAAGCAAGAGATTTTCC...GTATGACTCTGAGGAGACTCGGGGCTGCCTGTGGCTGTTAGCGGACAGGCGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTACCAAGTGCAGGCCATaGGCCAGGCGCTCTCGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SLVTSDVTFARSLSLRSATKCRP*ARRSRL Trigger: AAGCCGAGAGCGCCTGGCCAATGGCCTGCACTTGGT...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | GTTGCTGGTGGAGGAATCAGTGGTGCTCACTGTCTGACCACTCATTaGGCTCTGGCCACTCAGAGAACTCCGAAGGCTTTCCACAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VAGGGISGAHCLTTH*ALATQRTPKAFHRA Trigger: GGCTCTGTGGAAAGCCTTCGGAGTTCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCACTGATTCCTCCACCAGCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | ACACTCTCCCGGTTGCTGGTGGAGGAATCAGTGGTGCTCACTGTCTaGCCACTCATTGAGCTCTGGCCACTCAGAGAACTCCGAAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLSRLLVEESVVLTV*PLIELWPLRELRRL Trigger: AAGCCTTCGGAGTTCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCACTGATTCCTCCACCAGCAACCGGGAGAGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | GGGGATCGTCCACTCAGGCCCTGGTTGTCCACCAGCAGCTTTTCCTaGGAACCGGACTGGTCACTGTTACTGTCATATTCCTGCAACAGC | + |
|
Preference number: 5 (lower is better) Translates to: GDRPLRPWLSTSSFS*EPDWSLLLSYSCNS Trigger: GCTGTTGCAGGAATATGACAGTAACAGTGACCAGTCCGGTTCTCAGGAAAAGCTGCTGGTGGACAACCAGGGCCTGAGTGGACGATCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | GATGTTGCTTCCGAAGCAGCTTCACCCGGATCTGGTCCATGTTGGTaGCAACATCCCTCTCAGGCTGCTCTAGGTCCTCTGCGTATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: DVASEAASPGSGPCW*QHPSQAALGPLRIS Trigger: AGAGATACGCAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGTTTCCACTTCTGGTGTaGACACGGCGCTGCAGAAGC | + |
|
Preference number: 5 (lower is better) Translates to: GQLLSLQTAETHQSHTFWFPLLV*TRRCRS Trigger: GCTTCTGCAGCGCCGTGTCAACACCAGAAGTGGAAA...CCAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TTGGGCATCAAAGAGAATCACCTCGATTTCCTCGAGGGGCAGGGGAGGAGGGCTCCCCGACTCTCTCCTTaGCTGAAGGTTTTGACCAAC | + |
|
Preference number: 5 (lower is better) Translates to: LGIKENHLDFLEGQGRRAPRLSP*LKVLTN Trigger: GTTGGTCAAAACCTTCAGCAAAGGAGAGAGTCGGGG...AGCCCTCCTCCCCTGCCCCTCGAGGAAATCGAGGTGATTCTCTTTGATGCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGGAGCTATCCCAAGGTaGGAGGCCACCACGGAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVGAIPR*EATTEP Trigger: TGGCTCCGTGGTGGCCTCCAACCTTGGGATAGCTCC...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | GGGCAGCTGCTTTCTCTGCAGACAGCGGAGACACACCAATCACACACATTCTGGGATCGCCATCCGATGTaGCTTCCGAAGCAGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: GQLLSLQTAETHQSHTFWDRHPM*LPKQLH Trigger: GTGAAGCTGCTTCGGAAGCAACATCGGATGGCGATC...CCAGAATGTGTGTGATTGGTGTGTCTCCGCTGTCTGCAGAGAAAGCAGCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | TTTGACCAACTTCCGGCCAGCTCCCCACGTATCCAGGCTGCTGGATaGTGGAGATGGGGTGAGAGAGTCTGCATCATCTTCTGGAGGTTT | + |
|
Preference number: 5 (lower is better) Translates to: FDQLPASSPRIQAAG*WRWGERVCIIFWRF Trigger: AAACCTCCAGAAGATGATGCAGACTCTCTCACCCCATCTCCATCATCCAGCAGCCTGGATACGTGGGGAGCTGGCCGGAAGTTGGTCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000015449.6 ENSMUST00000212553.2 ENSMUST00000212869.2 |
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| CDS CCA 90 bp | TTTCCACAGGCTCAGGACCCTCCAGGGTTTCACAGCTGCGACAGATaGAGACCGGGAGGCTCCTTCGGTTTTTACTCAAATCAGTCACAG | + |
|
Preference number: 5 (lower is better) Translates to: FPQAQDPPGFHSCDR*RPGGSFGFYSNQSQ Trigger: CTGTGACTGATTTGAGTAAAAACCGAAGGAGCCTCCCGGTCTCCATCTGTCGCAGCTGTGAAACCCTGGAGGGTCCTGAGCCTGTGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 90 bp | TGGCAGAGCCTTGGAGGTGCAGGCAGACGTCTTCTGCGGCACTTCTaGTACATTCTGAGAACAGGTTTCTGGCATCTCGGTAGGCACATT | + |
|
Preference number: 5 (lower is better) Translates to: WQSLGGAGRRLLRHF*YILRTGFWHLGRHI Trigger: AATGTGCCTACCGAGATGCCAGAAACCTGTTCTCAGAATGTACCAGAAGTGCCGCAGAAGACGTCTGCCTGCACCTCCAAGGCTCTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | CTTAAACTTCACCGAGTCCTCTGTCTCATCATCCGACTGCTCTCTTaGGTTGCAGGTGGAGGAGCCATCCAATGTCGGGTAGGAGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LKLHRVLCLIIRLLS*VAGGGAIQCRVGAI Trigger: GATGGCTCCTACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACTCGGTGAAGTTTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | TCCCGTGACTCAAAGACCCAAGACCTTTCTTCATTTCCCCCTCTGTaGGGGAGCGGGACACTTTCTGGGCCTTCTCTTCTTCTGGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: SRDSKTQDLSSFPPL*GSGTLSGPSLLLDR Trigger: CCTATCCAGAAGAAGAGAAGGCCCAGAAAGTGTCCCGCTCCCTCACAGAGGGGGAAATGAAGAAAGGTCTTGGGTCTTTGAGTCACGGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTCAGCTTTGACACTCTCCCGGTaGCTGGTGGAGGAATCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLVTSDVTFARSLSLRSALTLSR*LVEESV Trigger: CACTGATTCCTCCACCAGCAACCGGGAGAGTGTCAA...AGCTGAGCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 90 bp | TTGGAGGTGCAGGCAGACGTCTTCTGCGGCACTTCTGGTACATTCTaGGAACAGGTTTCTGGCATCTCGGTAGGCACATTCTTGCCAACA | + |
|
Preference number: 5 (lower is better) Translates to: LEVQADVFCGTSGTF*EQVSGISVGTFLPT Trigger: TGTTGGCAAGAATGTGCCTACCGAGATGCCAGAAACCTGTTCTCAGAATGTACCAGAAGTGCCGCAGAAGACGTCTGCCTGCACCTCCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | AACACCATGGCCACCGTGACAGCCTCTCACAACACCATGGCCACCGTGACAGCCCCACATCTTCTCCTTTaGAAGTCTGTCTCATTATTC | + |
|
Preference number: 5 (lower is better) Translates to: NTMATVTASHNTMATVTAPHLLL*KSVSLF Trigger: GAATAATGAGACAGACTTCAAAAGGAGAAGATGTGG...GGCTGTCACGGTGGCCATGGTGTTGTGAGAGGCTGTCACGGTGGCCATGGTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | CAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGACAGCGTAGAGTTTACCAGCTaGTGCAACCTCTTAAACTTC | + |
|
Preference number: 5 (lower is better) Translates to: QHHGHRDSHSQHHGHCDSVEFTS*CNLLNF Trigger: GAAGTTTAAGAGGTTGCACAAGCTGGTAAACTCTAC...GCTGTCACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGCCTCGTGGCAGAGCCTaGGAGGTGCAGGCAGACGTC | + |
|
Preference number: 5 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMPRGRA*EVQADV Trigger: GACGTCTGCCTGCACCTCCAAGGCTCTGCCACGAGG...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTCTCTCTCTCTTCGCTTCTTCCAATCTCCTTaGCCTACACAGCCGTCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SSSLVTSDVTFARSLSLRFFQSP*PTQPSS Trigger: AGAAGACGGCTGTGTAGGCAAAGGAGATTGGAAGAA...GCGAAGAGAGAGAGACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATTCCCCATCTTCTGACTaGACACTCTCCCGGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RSCETHYSVSRTLFSQKNSPSSD*TLSRLL Trigger: CAGCAACCGGGAGAGTGTCAAGTCAGAAGATGGGGA...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGCCACTCAGGCCCTGGTaGTCCACCAGCAGCTTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMPLRPW*STSSFS Trigger: GGAAAAGCTGCTGGTGGACAACCAGGGCCTGAGTGG...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | ACTCAGTCCTCACACAGCAGTGACTTGGGAATCTACTTGTGTTCCACCGCAGTTGGGTCGGAAAATCTCTaGCTTTGGGTCAGAAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TQSSHSSDLGIYLCSTAVGSENL*LWVRSI Trigger: GATGCTTCTGACCCAAAGCAAGAGATTTTCCGACCC...AACTGCGGTGGAACACAAGTAGATTCCCAAGTCACTGCTGTGTGAGGACTGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | CGCAGTTGTGAAACACACTACTCCGTGTCCAGGACTCTTTTCTCACAGAAGAATCCTTTGCTGAAGGTTTaGACCAACTTCCGGCCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: RSCETHYSVSRTLFSQKNPLLKV*TNFRPA Trigger: AGCTGGCCGGAAGTTGGTCAAAACCTTCAGCAAAGG...ATTCTTCTGTGAGAAAAGAGTCCTGGACACGGAGTAGTGTGTTTCACAACTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TACTGCAACACCATGGCCACCGTGACAGCCACTCACAACACCATGGCCACTGTGGATTTGATGACTTCTTaGTACACAAAATCTCCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: YCNTMATVTATHNTMATVDLMTS*YTKSPS Trigger: AGAGGGAGATTTTGTGTACAAAGAAGTCATCAAATC...CACAGTGGCCATGGTGTTGTGAGTGGCTGTCACGGTGGCCATGGTGTTGCAGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTGCGAGGTGGGGCAGGAGGGGATTaGATGACTTCTTTGTACACA | + |
|
Preference number: 5 (lower is better) Translates to: SQKISPPPWLPPMLLLRGGAGGD*MTSLYT Trigger: TGTGTACAAAGAAGTCATCAAATCCCCTCCTGCCCC...ACCTCGCAAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 90 bp | CTCCATCCGCTCACACACGTCAGAAAAGCAGGTATTGTAATAATCTaGATACTGCTGTGCCAGGTCATCAATGTTTCCCAGGGAACCATC | + |
|
Preference number: 5 (lower is better) Translates to: LHPLTHVRKAGIVII*ILLCQVINVSQGTI Trigger: GATGGTTCCCTGGGAAACATTGATGACCTGGCACAGCAGTATGCAGATTATTACAATACCTGCTTTTCTGACGTGTGTGAGCGGATGGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS-3UTR CAA 90 bp | TGGAAATTCCCAAAAGATTTCTCCTCCTCCCTGGTTACCTCCGATGTTACTTTTAACGTGCCGACTTTGTaGTTCAGCAGGCCCATCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WKFPKDFSSSLVTSDVTFNVPTL*FSRPIQ Trigger: CTGGATGGGCCTGCTGAACAACAAAGTCGGCACGTT...AAAAGTAACATCGGAGGTAACCAGGGAGGAGGAGAAATCTTTTGGGAATTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 90 bp | ACACACGTCAGAAAAGCAGGTATTGTAATAATCTGCATACTGCTGTaGCAGGTCATCAATGTTTCCCAGGGAACCATCCAGGATGCCCAT | + |
|
Preference number: 5 (lower is better) Translates to: THVRKAGIVIICILL*QVINVSQGTIQDAH Trigger: ATGGGCATCCTGGATGGTTCCCTGGGAAACATTGATGACCTGGCACAGCAGTATGCAGATTATTACAATACCTGCTTTTCTGACGTGTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS GCA 90 bp | AAATCTCCCTCTTTACCCGCAGGGTCAGAATTATTACTGCCAACATaGAGAGAACGGTTTGTCAGGTCGAATCCACCAAAACTGCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KSPSLPAGSELLLPT*RERFVRSNPPKLQV Trigger: AACCTGCAGTTTTGGTGGATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACCCTGCGGGTAAAGAGGGAGATTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000015449.6 ENSMUST00000212869.2 |
||
| CDS-3UTR CAA 90 bp | TTAACACCCAGCGGATGTGGTTTATCTGGCTCCATAATGAACCTTTGCTTGAATTCGGTAGGCACATTCTaGCCAACATCAGCATCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: LTPSGCGLSGSIMNLCLNSVGTF*PTSASP Trigger: GGGAGATGCTGATGTTGGCAAGAATGTGCCTACCGA...ATTCAAGCAAAGGTTCATTATGGAGCCAGATAAACCACATCCGCTGGGTGTTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 90 bp | TGTACACAAAATCTCCCTCTTTACCCGCAGGGTCAGAATTATTACTaGCAACATGCAGAGAACGGTTTGTCAGGTCGAATCCACCAAAAC | + |
|
Preference number: 5 (lower is better) Translates to: CTQNLPLYPQGQNYY*QHAENGLSGRIHQN Trigger: GTTTTGGTGGATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACCCTGCGGGTAAAGAGGGAGATTTTGTGTACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000015449.6 ENSMUST00000212869.2 |
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| CDS CCA 90 bp | TGCATCATCTTCTGGAGGTTTCTCAGGAGAGCCATCATAGAAAAATaGCTTTTTGTGCACTCCAGAGTAGAGTGCAGATCTTTCATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CIIFWRFLRRAIIEK*LFVHSRVECRSFIL Trigger: CAAGATGAAAGATCTGCACTCTACTCTGGAGTGCACAAAAAGCCATTTTTCTATGATGGCTCTCCTGAGAAACCTCCAGAAGATGATGCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000015449.6 ENSMUST00000212553.2 ENSMUST00000212869.2 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGAGCCGTCTTCTGAGTTaGATTTATGGAGAGGGTACT | + |
|
Preference number: 5 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMSRLLS*IYGEGT Trigger: AGTACCCTCTCCATAAATCAAACTCAGAAGACGGCT...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS TCA 90 bp | ACTCATCGTAATCTCGCTGGCTACATAGCCCACATCTTCTCCTTTTaGAGTCTGTCTCATTATTCCTTTTTGGTTCTTTCGGAAATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: THRNLAGYIAHIFSF*SLSHYSFLVLSEIL Trigger: CAGAATTTCCGAAAGAACCAAAAAGGAATAATGAGACAGACTTCAAAAGGAGAAGATGTGGGCTATGTAGCCAGCGAGATTACGATGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS-3UTR CAA 90 bp | ATGGCTTTCTGCAAAGGTGATCTGATAGTTGATGAATGGATTTGGGGATGGATGGTACCCATGGGTGGTTaGCTAATTATGTCAATGATA | + |
|
Preference number: 5 (lower is better) Translates to: MAFCKGDLIVDEWIWGWMVPMGG*LIMSMI Trigger: TATCATTGACATAATTAGCAAACCACCCATGGGTAC...CATCCATCCCCAAATCCATTCATCAACTATCAGATCACCTTTGCAGAAAGCCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CAA 90 bp | GGGAACCATCCAGGATGCCCATCACGTCGGTCCAGAGGCGGGAGATaGACTCGGAGACACCGGCCTCGGGCTCCAGCTCCCGGGCGGGAT | + |
|
Preference number: 6 (lower is better) Translates to: GNHPGCPSRRSRGGR*TRRHRPRAPAPGRD Trigger: ATCCCGCCCGGGAGCTGGAGCCCGAGGCCGGTGTCTCCGAGTCAATCTCCCGCCTCTGGACCGACGTGATGGGCATCCTGGATGGTTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | CAGGCTAGTGCTCTCGGGCAGCTCAGCCAGCCAGGGTaGAGGTCTCGTACAGGCTGGGCTGCCCGGCTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: QASALGQLSQPG*RSRTGWAARLS Trigger: ACTGAGCCGGGCAGCCCAGCCTGTACGAGACCTCCACCCTGGCTGGCTGAGCTGCCCGAGAGCACTAGCCTG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | GTGGGGCTGGCGTCGGGTTTCTCCACATCCAGGTCCTaGGAAACGCGCCGTTTCCGGAGCTCCTCCATCCGC | + |
|
Preference number: 6 (lower is better) Translates to: VGLASGFSTSRS*ETRRFRSSSIR Trigger: GCGGATGGAGGAGCTCCGGAAACGGCGCGTTTCCCAGGACCTGGATGTGGAGAAACCCGACGCCAGCCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | CAGGCCATTGGCCAGGCGCTCTCGGCTTTTCTTGGCTaGCACAGGAGGGGGCTGCGACGGATGTCGGGACTG | + |
|
Preference number: 6 (lower is better) Translates to: QAIGQALSAFLG*HRRGLRRMSGL Trigger: CAGTCCCGACATCCGTCGCAGCCCCCTCCTGTGCCAGCCAAGAAAAGCCGAGAGCGCCTGGCCAATGGCCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | AGTGCAGGCCATTGGCCAGGCGCTCTCGGCTTTTCTTaGCTGGCACAGGAGGGGGCTGCGACGGATGTCGGG | + |
|
Preference number: 6 (lower is better) Translates to: SAGHWPGALGFS*LAQEGAATDVG Trigger: CCCGACATCCGTCGCAGCCCCCTCCTGTGCCAGCCAAGAAAAGCCGAGAGCGCCTGGCCAATGGCCTGCACT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CCATCGGGCCAGTCTGCGGGGTCCAAGGTGGATGACTaGCGGTGCTGGGCCTCGTATTCCTTCAGCCTGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PSGQSAGSKVDD*RCWASYSFSLA Trigger: CGCCAGGCTGAAGGAATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGACCCCGCAGACTGGCCCGATGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CCGCTCCACCACGTAGGTGATATTGAACTCGCTGACTaGGGTGCGCCCTCGGCCCCTCCTGCCAGCGAAGCC | + |
|
Preference number: 6 (lower is better) Translates to: PLHHVGDIELAD*GAPSAPPASEA Trigger: GGCTTCGCTGGCAGGAGGGGCCGAGGGCGCACCTCAGTCAGCGAGTTCAATATCACCTACGTGGTGGAGCGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
||
| CDS GCA 72 bp | TCTTGGCAGTGTCCGGGGCTAGACCTCGTCCCAGCCTaGCCTCCTCTCCCTGCTTGCGCACCTCCCCTGATT | + |
|
Preference number: 6 (lower is better) Translates to: SWQCPGLDLVPA*PPLPACAPPLI Trigger: AATCAGGGGAGGTGCGCAAGCAGGGAGAGGAGGGCAGGCTGGGACGAGGTCTAGCCCCGGACACTGCCAAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | CGCTCTCGGCTTTTCTTGGCTGGCACAGGAGGGGGCTaGGACGGATGTCGGGACTGTGTCCTGGTCTCAGGG | + |
|
Preference number: 6 (lower is better) Translates to: RSRLFLAGTGGG*DGCRDCVLVSG Trigger: CCCTGAGACCAGGACACAGTCCCGACATCCGTCGCAGCCCCCTCCTGTGCCAGCCAAGAAAAGCCGAGAGCG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | TGGGTGCCTCTGGGCTGGGGACCAAGTGCAGGCCATTaGCCAGGCGCTCTCGGCTTTTCTTGGCTGGCACAG | + |
|
Preference number: 6 (lower is better) Translates to: WVPLGWGPSAGH*PGALGFSWLAQ Trigger: CTGTGCCAGCCAAGAAAAGCCGAGAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | AGGGCTGGCTTTCTTCAGTGGCAGGATGGGTGCCTCTaGGCTGGGGACCAAGTGCAGGCCATTGGCCAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RAGFLQWQDGCL*AGDQVQAIGQA Trigger: CGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCAGCCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | AAGTGCAGGCCATTGGCCAGGCGCTCTCGGCTTTTCTaGGCTGGCACAGGAGGGGGCTGCGACGGATGTCGG | + |
|
Preference number: 6 (lower is better) Translates to: KCRPLARRSRLF*AGTGGGCDGCR Trigger: CCGACATCCGTCGCAGCCCCCTCCTGTGCCAGCCAAGAAAAGCCGAGAGCGCCTGGCCAATGGCCTGCACTT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | GGAGCCATCGGGCCAGTCTGCGGGGTCCAAGGTGGATaGCTGACGGTGCTGGGCCTCGTATTCCTTCAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GAIGPVCGVQGG*LTVLGLVFLQP Trigger: AGGCTGAAGGAATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGACCCCGCAGACTGGCCCGATGGCTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | CTGCTCAGCACTGGGCCCAGTTTCACACCATGCTCCTaGAGGCTAGTGCTCTCGGGCAGCTCAGCCAGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LLSTGPSFTPCS*RLVLSGSSASQ Trigger: CTGGCTGGCTGAGCTGCCCGAGAGCACTAGCCTGCAGGAGCATGGTGTGAAACTGGGCCCAGTGCTGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CGTGTTCGGAGTCAGGCTTTCCTGAGGCGGGGGAGCTaGGCATTCCATCGAGCCCCGAGTCCTGCTCTGAGA | + |
|
Preference number: 6 (lower is better) Translates to: RVRSQAFLRRGS*AFHRAPSPALR Trigger: TCTCAGAGCAGGACTCGGGGCTCGATGGAATGCCCAGCTCCCCCGCCTCAGGAAAGCCTGACTCCGAACACG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | TGGCTTTCTTCAGTGGCAGGATGGGTGCCTCTGGGCTaGGGACCAAGTGCAGGCCATTGGCCAGGCGCTCTC | + |
|
Preference number: 6 (lower is better) Translates to: WLSSVAGWVPLG*GPSAGHWPGAL Trigger: GAGAGCGCCTGGCCAATGGCCTGCACTTGGTCCCCAGCCCAGAGGCACCCATCCTGCCACTGAAGAAAGCCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | ACCTTCCTGCTCAGCACTGGGCCCAGTTTCACACCATaGTCCTGCAGGCTAGTGCTCTCGGGCAGCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: TFLLSTGPSFTP*SCRLVLSGSSA Trigger: GGCTGAGCTGCCCGAGAGCACTAGCCTGCAGGAGCATGGTGTGAAACTGGGCCCAGTGCTGAGCAGGAAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | GGTAGGAGCCATCGGGCCAGTCTGCGGGGTCCAAGGTaGATGACTGACGGTGCTGGGCCTCGTATTCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRSHRASLRGPR*MTDGAGPRIPS Trigger: TGAAGGAATACGAGGCCCAGCACCGTCAGTCATCCACCTTGGACCCCGCAGACTGGCCCGATGGCTCCTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CATCTGCTGTGGGATCTCGGCCTCGTGGCAGAGCCTTaGAGGTGCAGGCAGACGTCTTCTGCGGCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: HLLWDLGLVAEP*RCRQTSSAALL Trigger: CAGAAGTGCCGCAGAAGACGTCTGCCTGCACCTCCAAGGCTCTGCCACGAGGCCGAGATCCCACAGCAGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | GGTGATGCCGGCCTCCTGAAGGCAAGAGTGGGACAGGGAAGGCACTaGGCTCAGCGTGCTGAACCCTGCGTCAGAAAGGGTGCTCGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: GDAGLLKARVGQGRH*AQRAEPCVRKGARV Trigger: TACACGAGCACCCTTTCTGACGCAGGGTTCAGCACGCTGAGCCAAGTGCCTTCCCTGTCCCACTCTTGCCTTCAGGAGGCCGGCATCACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | TCCGTCAGCCCACCACTCGGGATCGCCATCCGATGTTaGTTCCGAAGCAGCTTCACCCGGATCTGGTCCATG | + |
|
Preference number: 6 (lower is better) Translates to: SVSPPLGIAIRC*FRSSFTRIWSM Trigger: CATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGATGGCGATCCCGAGTGGTGGGCTGACGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | ACATGGACGCAACACAGCCGGGAGAGAGGGGCTTTCTaGAGATTTCCGTCAGCCCACCACTCGGGATCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: TWTQHSRERGAF*RFPSAHHSGSP Trigger: TGGCGATCCCGAGTGGTGGGCTGACGGAAATCTGCAGAAAGCCCCTCTCTCCCGGCTGTGTTGCGTCCATGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CAGAAGCCTAGAGACTCTTCGATCTGGGACCGCAGCTaGAGTGACGTGGGGCTGGCGTCGGGTTTCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: QKPRDSSIWDRS*SDVGLASGFST Trigger: TGTGGAGAAACCCGACGCCAGCCCCACGTCACTTCAGCTGCGGTCCCAGATCGAAGAGTCTCTAGGCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CAAGTTCTCGCTGCTTTCGTAGCATCCGGAGTCTCGTaGGGATCGTCCACTCAGGCCCTGGTTGTCCACCAG | + |
|
Preference number: 6 (lower is better) Translates to: QVLAAFVASGVS*GSSTQALVVHQ Trigger: CTGGTGGACAACCAGGGCCTGAGTGGACGATCCCCACGAGACTCCGGATGCTACGAAAGCAGCGAGAACTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | TACTCAAATCAGTCACAGAGGGCACGTCACAGCTCTTaGCAGTGTCCGGGGCTAGACCTCGTCCCAGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: YSNQSQRARHSS*QCPGLDLVPAC Trigger: GCAGGCTGGGACGAGGTCTAGCCCCGGACACTGCCAAGAGCTGTGACGTGCCCTCTGTGACTGATTTGAGTA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CACACCCCGGACACAGGAAACCTTCCTGCTCAGCACTaGGCCCAGTTTCACACCATGCTCCTGCAGGCTAGT | + |
|
Preference number: 6 (lower is better) Translates to: HTPDTGNLPAQH*AQFHTMLLQAS Trigger: ACTAGCCTGCAGGAGCATGGTGTGAAACTGGGCCCAGTGCTGAGCAGGAAGGTTTCCTGTGTCCGGGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | AGGCTTTCCACAGAGCCCCCGGCTTTGAGCTTAGGCTaGTCCACGTGTTCGGAGTCAGGCTTTCCTGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RLSTEPPALSLG*STCSESGFPEA Trigger: CGCCTCAGGAAAGCCTGACTCCGAACACGTGGACAAGCCTAAGCTCAAAGCCGGGGGCTCTGTGGAAAGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | TTCCGTCAGCCCACCACTCGGGATCGCCATCCGATGTaGCTTCCGAAGCAGCTTCACCCGGATCTGGTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: FRQPTTRDRHPM*LPKQLHPDLVH Trigger: ATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGATGGCGATCCCGAGTGGTGGGCTGACGGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | CTTCGGTTTTTACTCAAATCAGTCACAGAGGGCACGTCACAGCTCTaGGCAGTGTCCGGGGCTAGACCTCGTCCCAGCCTGCCCTCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRFLLKSVTEGTSQL*AVSGARPRPSLPSS Trigger: AGAGGAGGGCAGGCTGGGACGAGGTCTAGCCCCGGACACTGCCAAGAGCTGTGACGTGCCCTCTGTGACTGATTTGAGTAAAAACCGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | TCTCTAGGTCCACACCCCGGACACAGGAAACCTTCCTaGTCAGCACTGGGCCCAGTTTCACACCATGCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SLGPHPGHRKPS*SALGPVSHHAP Trigger: AGGAGCATGGTGTGAAACTGGGCCCAGTGCTGAGCAGGAAGGTTTCCTGTGTCCGGGGTGTGGACCTAGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | TCCGAAGCAGCTTCACCCGGATCTGGTCCATGTTGGTaGCAACATCCCTCTCAGGCTGCTCTAGGTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SEAASPGSGPCW*QHPSQAALGPL Trigger: CAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | GCTTCCGAAGCAGCTTCACCCGGATCTGGTCCATGTTaGTGGCAACATCCCTCTCAGGCTGCTCTAGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ASEAASPGSGPC*WQHPSQAALGP Trigger: AGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | AGAGAACTCCGAAGGCTTTCCACAGAGCCCCCGGCTTaGAGCTTAGGCTTGTCCACGTGTTCGGAGTCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: RELRRLSTEPPA*SLGLSTCSESG Trigger: GCCTGACTCCGAACACGTGGACAAGCCTAAGCTCAAAGCCGGGGGCTCTGTGGAAAGCCTTCGGAGTTCTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | TTACTCAAATCAGTCACAGAGGGCACGTCACAGCTCTaGGCAGTGTCCGGGGCTAGACCTCGTCCCAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LLKSVTEGTSQL*AVSGARPRPSL Trigger: CAGGCTGGGACGAGGTCTAGCCCCGGACACTGCCAAGAGCTGTGACGTGCCCTCTGTGACTGATTTGAGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | ACCCCGATAGGGTGGCTCTTCGTCATCCCCATCTTCTaGCTTGACACTCTCCCGGTTGCTGGTGGAGGAATC | + |
|
Preference number: 6 (lower is better) Translates to: TPIGWLFVIPIF*LDTLPVAGGGI Trigger: GATTCCTCCACCAGCAACCGGGAGAGTGTCAAGTCAGAAGATGGGGATGACGAAGAGCCACCCTATCGGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | TTGATCCGGTCCAGGAGATCCTCCACAGACTTCGGCTaGGATGGTCTTCCCTTCTTCCTCCTCCTGGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: LIRSRRSSTDFG*DGLPFFLLLVG Trigger: CCCTACCAGGAGGAGGAAGAAGGGAAGACCATCTCAGCCGAAGTCTGTGGAGGATCTCCTGGACCGGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CACAACGGCCATGCTTATCAGAGTAGGGCTCCTCAGTaGGATCAATGCCCTCCGCCTGCAGCTTGTTCTCCG | + |
|
Preference number: 6 (lower is better) Translates to: HNGHAYQSRAPQ*DQCPPPAACSP Trigger: CGGAGAACAAGCTGCAGGCGGAGGGCATTGATCTCACTGAGGAGCCCTACTCTGATAAGCATGGCCGTTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CTGTCTCATCATCCGACTGCTCTCTTGAGTTGCAGGTaGAGGAGCCATCCAATGTCGGGTAGGAGCCATCGG | + |
|
Preference number: 6 (lower is better) Translates to: LSHHPTALLSCR*RSHPMSGRSHR Trigger: CCGATGGCTCCTACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | ATCTCTTGCTTTGGGTCAGAAGCATCACATCTGCTGTaGGATCTCGGCCTCGTGGCAGAGCCTTGGAGGTGC | + |
|
Preference number: 6 (lower is better) Translates to: ISCFGSEASHLL*DLGLVAEPWRC Trigger: GCACCTCCAAGGCTCTGCCACGAGGCCGAGATCCCACAGCAGATGTGATGCTTCTGACCCAAAGCAAGAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | ATCCGATGTTGCTTCCGAAGCAGCTTCACCCGGATCTaGTCCATGTTGGTGGCAACATCCCTCTCAGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IRCCFRSSFTRI*SMLVATSLSGC Trigger: GCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | GGTTGCTGGTGGAGGAATCAGTGGTGCTCACTGTCTGACCACTCATaGAGCTCTGGCCACTCAGAGAACTCCGAAGGCTTTCCACAGAGC | + |
|
Preference number: 6 (lower is better) Translates to: GCWWRNQWCSLSDHS*SSGHSENSEGFPQS Trigger: GCTCTGTGGAAAGCCTTCGGAGTTCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCACTGATTCCTCCACCAGCAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | ATCCGATGTTGCTTCCGAAGCAGCTTCACCCGGATCTGGTCCATGTaGGTGGCAACATCCCTCTCAGGCTGCTCTAGGTCCTCTGCGTAT | + |
|
Preference number: 6 (lower is better) Translates to: IRCCFRSSFTRIWSM*VATSLSGCSRSSAY Trigger: ATACGCAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGATCCGGGTGAAGCTGCTTCGGAAGCAACATCGGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CACCGAGTCCTCTGTCTCATCATCCGACTGCTCTCTTaGGTTGCAGGTGGAGGAGCCATCCAATGTCGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: HRVLCLIIRLLS*VAGGGAIQCRV Trigger: TACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACTCGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | AGTCCTCTGTCTCATCATCCGACTGCTCTCTTGAGTTaGAGGTGGAGGAGCCATCCAATGTCGGGTAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: SPLSHHPTALLS*RWRSHPMSGRS Trigger: GCTCCTACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | ATCTGGTCCATGTTGGTGGCAACATCCCTCTCAGGCTaGTCTAGGTCCTCTGCGTATCTCTGTACCAGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: IWSMLVATSLSG*SRSSAYLCTRA Trigger: AGCCCTGGTACAGAGATACGCAGAGGACCTAGAGCAGCCTGAGAGGGATGTTGCCACCAACATGGACCAGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | GCTCAGGACCCTCCAGGGTTTCACAGCTGCGACAGATaGAGACCGGGAGGCTCCTTCGGTTTTTACTCAAAT | + |
|
Preference number: 6 (lower is better) Translates to: AQDPPGFHSCDR*RPGGSFGFYSN Trigger: ATTTGAGTAAAAACCGAAGGAGCCTCCCGGTCTCCATCTGTCGCAGCTGTGAAACCCTGGAGGGTCCTGAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | TCACCGAGTCCTCTGTCTCATCATCCGACTGCTCTCTaGAGTTGCAGGTGGAGGAGCCATCCAATGTCGGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPSPLSHHPTAL*SCRWRSHPMSG Trigger: ACCCGACATTGGATGGCTCCTCCACCTGCAACTCAAGAGAGCAGTCGGATGATGAGACAGAGGACTCGGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | GATGGTCTTCCCTTCTTCCTCCTCCTGGTAGGGCGCTaGGGCTTCTCCTCTTCCTCATTTAGCACATCCACG | + |
|
Preference number: 6 (lower is better) Translates to: DGLPFFLLLVGR*GFSSSSFSTST Trigger: CGTGGATGTGCTAAATGAGGAAGAGGAGAAGCCCAAGCGCCCTACCAGGAGGAGGAAGAAGGGAAGACCATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | GGAGGAATCAGTGGTGCTCACTGTCTGACCACTCATTaGGCTCTGGCCACTCAGAGAACTCCGAAGGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GGISGAHCLTTH*ALATQRTPKAF Trigger: GAAAGCCTTCGGAGTTCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCACTGATTCCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | GGTACTTTCTTTCCACTTCTGGTGTTGACACGGCGCTaGAGAAGCCTAGAGACTCTTCGATCTGGGACCGCA | + |
|
Preference number: 6 (lower is better) Translates to: GTFFPLLVLTRR*RSLETLRSGTA Trigger: TGCGGTCCCAGATCGAAGAGTCTCTAGGCTTCTGCAGCGCCGTGTCAACACCAGAAGTGGAAAGAAAGTACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | GGAAAATCTCTTGCTTTGGGTCAGAAGCATCACATCTaGTGTGGGATCTCGGCCTCGTGGCAGAGCCTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: GKSLALGQKHHI*CGISASWQSLG Trigger: TCCAAGGCTCTGCCACGAGGCCGAGATCCCACAGCAGATGTGATGCTTCTGACCCAAAGCAAGAGATTTTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
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| CDS CCA 72 bp | GCAGCAGGTCACAGGTGCTGCCATTTACTCCTTTTCTaGAGGGACGCTGGCAGAGAAAAGTTCTGGAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGHRCCHLLLF*RDAGREKFWNR Trigger: CCTGTTCCAGAACTTTTCTCTGCCAGCGTCCCTCCAGAAAAGGAGTAAATGGCAGCACCTGTGACCTGCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
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| CDS TCA 72 bp | AAGGCAATGTCGGGTAGTTGCCTGGCTGACTCCTGGTaGAAGACTTTAAGTTGGACTCCGTGGACGACTTGG | + |
|
Preference number: 6 (lower is better) Translates to: KAMSGSCLADSW*KTLSWTPWTTW Trigger: CCAAGTCGTCCACGGAGTCCAACTTAAAGTCTTTCACCAGGAGTCAGCCAGGCAACTACCCGACATTGCCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | CAGGCAGACGTCTTCTGCGGCACTTCTGGTACATTCTaGGAACAGGTTTCTGGCATCTCGGTAGGCACATTC | + |
|
Preference number: 6 (lower is better) Translates to: QADVFCGTSGTF*EQVSGISVGTF Trigger: GAATGTGCCTACCGAGATGCCAGAAACCTGTTCTCAGAATGTACCAGAAGTGCCGCAGAAGACGTCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | AGCCTCAGGGCTTGGTGGCAGTTTGAAGAGTCTGGCTaGCGTTATGAGTTTCCTTATGTGTCTCTCCTCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SLRAWWQFEESG*RYEFPYVSLLG Trigger: ACCGAGGAGAGACACATAAGGAAACTCATAACGGCAGCCAGACTCTTCAAACTGCCACCAAGCCCTGAGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | TGGAGGAATCAGTGGTGCTCACTGTCTGACCACTCATaGAGCTCTGGCCACTCAGAGAACTCCGAAGGCTTT | + |
|
Preference number: 6 (lower is better) Translates to: WRNQWCSLSDHS*SSGHSENSEGF Trigger: AAAGCCTTCGGAGTTCTCTGAGTGGCCAGAGCTCAATGAGTGGTCAGACAGTGAGCACCACTGATTCCTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | TCAAAGACCCAAGACCTTTCTTCATTTCCCCCTCTGTaGGGGAGCGGGACACTTTCTGGGCCTTCTCTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: SKTQDLSSFPPL*GSGTLSGPSLL Trigger: AAGAAGAGAAGGCCCAGAAAGTGTCCCGCTCCCTCACAGAGGGGGAAATGAAGAAAGGTCTTGGGTCTTTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000015449.6 ENSMUST00000212869.2 |
||
| CDS TCA 72 bp | GTCAGGTCGAATCCACCAAAACTGCAGGTTCTCCCGTaGCTCAAAGACCCAAGACCTTTCTTCATTTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: VRSNPPKLQVLP*LKDPRPFFISP Trigger: GGGGGAAATGAAGAAAGGTCTTGGGTCTTTGAGTCACGGGAGAACCTGCAGTTTTGGTGGATTCGACCTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CCA 72 bp | CTGCGGCACTTCTGGTACATTCTGAGAACAGGTTTCTaGCATCTCGGTAGGCACATTCTTGCCAACATCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRHFWYILRTGF*HLGRHILANIS Trigger: GCTGATGTTGGCAAGAATGTGCCTACCGAGATGCCAGAAACCTGTTCTCAGAATGTACCAGAAGTGCCGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | CTGAGTTTGATTTATGGAGAGGGTACTTTCTTTCCACTTCTGGTGTaGACACGGCGCTGCAGAAGCCTAGAGACTCTTCGATCTGGGACC | + |
|
Preference number: 6 (lower is better) Translates to: LSLIYGEGTFFPLLV*TRRCRSLETLRSGT Trigger: GGTCCCAGATCGAAGAGTCTCTAGGCTTCTGCAGCGCCGTGTCAACACCAGAAGTGGAAAGAAAGTACCCTCTCCATAAATCAAACTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | TACCCGCAGGGTCAGAATTATTACTGCCAACATGCAGAGAACGGTTaGTCAGGTCGAATCCACCAAAACTGCAGGTTCTCCCGTGACTCA | + |
|
Preference number: 6 (lower is better) Translates to: YPQGQNYYCQHAENG*SGRIHQNCRFSRDS Trigger: TGAGTCACGGGAGAACCTGCAGTTTTGGTGGATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACCCTGCGGGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | TCCGTTTTCTTCAAGCGGATTTGCTTACGGATACTCTaGACCTCCTCCAAGGACACCAGAAAGTGGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SVFFKRICLRIL*TSSKDTRKWCL Trigger: CAGGCACCACTTTCTGGTGTCCTTGGAGGAGGTTCAGAGTATCCGTAAGCAAATCCGCTTGAAGAAAACGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
||
| CDS CAA 72 bp | ATTTATGGAGAGGGTACTTTCTTTCCACTTCTGGTGTaGACACGGCGCTGCAGAAGCCTAGAGACTCTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: IYGEGTFFPLLV*TRRCRSLETLR Trigger: TCGAAGAGTCTCTAGGCTTCTGCAGCGCCGTGTCAACACCAGAAGTGGAAAGAAAGTACCCTCTCCATAAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 90 bp | CCGACTTTGTTGTTCAGCAGGCCCATCCAGGTACCCATGGGTGGTTaGCTAATTATGTCAATGATATCTCCTTTCTTGAGCTTCAGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PTLLFSRPIQVPMGG*LIMSMISPFLSFRE Trigger: CTCTCTGAAGCTCAAGAAAGGAGATATCATTGACATAATTAGCAAACCACCCATGGGTACCTGGATGGGCCTGCTGAACAACAAAGTCGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS TCA 72 bp | ATGGTGATCATTTTCTCCTTGACCATCATCATCAGCTaGATCCGCTCCTCGTCACTCATCGTAATCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: MVIIFSLTIIIS*IRSSSLIVISL Trigger: CAGCGAGATTACGATGAGTGACGAGGAGCGGATTCAGCTGATGATGATGGTCAAGGAGAAAATGATCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | AATCTCCCTCTTTACCCGCAGGGTCAGAATTATTACTaGCAACATGCAGAGAACGGTTTGTCAGGTCGAATC | + |
|
Preference number: 6 (lower is better) Translates to: NLPLYPQGQNYY*QHAENGLSGRI Trigger: GATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACCCTGCGGGTAAAGAGGGAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015449.6 ENSMUST00000212869.2 |
||
| CDS CCA 72 bp | TCGAATCCACCAAAACTGCAGGTTCTAGACTTCTGGTaGATTCTCAAGAGAACCCTTTTAGTACAGCGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: SNPPKLQVLDFW*ILKRTLLVQRS Trigger: GGACCGCTGTACTAAAAGGGTTCTCTTGAGAATCCACCAGAAGTCTAGAACCTGCAGTTTTGGTGGATTCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
||
| CDS CAA 72 bp | GGTCAGAATTATTACTGCCAACATGCAGAGAACGGTTaGTCAGGTCGAATCCACCAAAACTGCAGGTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: GQNYYCQHAENG*SGRIHQNCRFS Trigger: GGAGAACCTGCAGTTTTGGTGGATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | TCTTTACCCGCAGGGTCAGAATTATTACTGCCAACATaGAGAGAACGGTTTGTCAGGTCGAATCCACCAAAA | + |
|
Preference number: 6 (lower is better) Translates to: SLPAGSELLLPT*RERFVRSNPPK Trigger: TTTTGGTGGATTCGACCTGACAAACCGTTCTCTGCATGTTGGCAGTAATAATTCTGACCCTGCGGGTAAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000015449.6 ENSMUST00000212869.2 |
||
| CDS CCA 72 bp | CACTCCAGAGTAGAGTGCAGATCTTTCATCTTGGACTaGGGAATTCTCAAATACATGTTCCTCTCCACCTTC | + |
|
Preference number: 6 (lower is better) Translates to: HSRVECRSFILD*GILKYMFLSTF Trigger: GAAGGTGGAGAGGAACATGTATTTGAGAATTCCCCAGTCCAAGATGAAAGATCTGCACTCTACTCTGGAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015449.6 ENSMUST00000212553.2 ENSMUST00000212869.2 |
||
| CDS GCA 72 bp | AGAAAAGCAGGTATTGTAATAATCTGCATACTGCTGTaGCAGGTCATCAATGTTTCCCAGGGAACCATCCAG | + |
|
Preference number: 6 (lower is better) Translates to: RKAGIVIICILL*QVINVSQGTIQ Trigger: CTGGATGGTTCCCTGGGAAACATTGATGACCTGGCACAGCAGTATGCAGATTATTACAATACCTGCTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS GCA 72 bp | CTCACACACGTCAGAAAAGCAGGTATTGTAATAATCTaGATACTGCTGTGCCAGGTCATCAATGTTTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LTHVRKAGIVII*ILLCQVINVSQ Trigger: CTGGGAAACATTGATGACCTGGCACAGCAGTATGCAGATTATTACAATACCTGCTTTTCTGACGTGTGTGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | TCCAATCTCCTTTGCCTACACAGCCGTCTTCTGAGTTaGATTTATGGAGAGGGTACTTTCTTTCCACTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SNLLCLHSRLLS*IYGEGTFFPLL Trigger: CAGAAGTGGAAAGAAAGTACCCTCTCCATAAATCAAACTCAGAAGACGGCTGTGTAGGCAAAGGAGATTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000015449.6 |
||
| CDS CAA 72 bp | AGTTTCTTTCTGACTCTTCGAGTAGAGTTTACCAGCTaGTGCAACCTCTTAAACTTCACCGAGTCCTCTGTC | + |
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Preference number: 6 (lower is better) Translates to: SFFLTLRVEFTS*CNLLNFTESSV Trigger: GACAGAGGACTCGGTGAAGTTTAAGAGGTTGCACAAGCTGGTAAACTCTACTCGAAGAGTCAGAAAGAAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000015449.6 ENSMUST00000212553.2 ENSMUST00000212869.2 |
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| CDS CAA 72 bp | ACAGGAGTAATTAGTATCCGTTTTCTTCAAGCGGATTaGCTTACGGATACTCTGAACCTCCTCCAAGGACAC | + |
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Preference number: 6 (lower is better) Translates to: TGVISIRFLQAD*LTDTLNLLQGH Trigger: GTGTCCTTGGAGGAGGTTCAGAGTATCCGTAAGCAAATCCGCTTGAAGAAAACGGATACTAATTACTCCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212869.2 |
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