RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for SART1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000039148

Ensembl transcript IDs: ENSMUST00000044207.5, ENSMUST00000235654.2

Found 205 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACCACTCGGAAGGCAACACAGAAGGGCGAGGAGGCTCAGCGACTTaGCAGATGGCAGAACTGACCGTGACAGAGGCCTTGCCTAGGTCT +
Preference number: 1 (lower is better)
Translates to: DHSEGNTEGRGGSAT*QMAELTVTEALPRS
Trigger: AGACCTAGGCAAGGCCTCTGTCACGGTCAGTTCTGCCATCTGGCAAGTCGCTGAGCCTCCTCGCCCTTCTGTGTTGCCTTCCGAGTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp TCAAGCTGGAAGATGACCTCTGGGGACCTCAGCAAGACACAGGCATaGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGC +
Preference number: 1 (lower is better)
Translates to: SSWKMTSGDLSKTQA*PEGMRTPEQGLRHS
Trigger: GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGTCTTGCTGAGGTCCCCAGAGGTCATCTTCCAGCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp GCCCAGGTAGTGCCACATCCACCTACTAGGCATGTGGGCCAAACCTaGAGAGTCTCAAGCTGGAAGATGACCTCTGGGGACCTCAGCAAG +
Preference number: 1 (lower is better)
Translates to: AQVVPHPPTRHVGQT*RVSSWKMTSGDLSK
Trigger: CTTGCTGAGGTCCCCAGAGGTCATCTTCCAGCTTGAGACTCTCCAGGTTTGGCCCACATGCCTAGTAGGTGGATGTGGCACTACCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp CAGTGTGACAGGTACACGCCACTGGGTGGAGGGCTTCTGTTACAATaGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACCAGGCTGGT +
Preference number: 1 (lower is better)
Translates to: QCDRYTPLGGGLLLQ*SQLTEECPLRDQAG
Trigger: ACCAGCCTGGTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCCACCCAGTGGCGTGTACCTGTCACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp CATCCACCTACTAGGCATGTGGGCCAAACCTGGAGAGTCTCAAGCTaGAAGATGACCTCTGGGGACCTCAGCAAGACACAGGCATGGCCT +
Preference number: 1 (lower is better)
Translates to: HPPTRHVGQTWRVSS*KMTSGDLSKTQAWP
Trigger: AGGCCATGCCTGTGTCTTGCTGAGGTCCCCAGAGGTCATCTTCCAGCTTGAGACTCTCCAGGTTTGGCCCACATGCCTAGTAGGTGGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 90 bp ACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCCTTaGGTTCAAGGCCAGACTGTTCTACAGAGTTCCATGACAGCCAGG +
Preference number: 1 (lower is better)
Translates to: TPLIPAPKRQKQVDP*VQGQTVLQSSMTAR
Trigger: CCTGGCTGTCATGGAACTCTGTAGAACAGTCTGGCCTTGAACTCAAGGATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 90 bp GAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTaGGGGACCAGGCTGGTTTCTCACCTCCTCTGTTCATTAAATGGC +
Preference number: 1 (lower is better)
Translates to: EGFCYNGVSSQRNVL*GTRLVSHLLCSLNG
Trigger: GCCATTTAATGAACAGAGGAGGTGAGAAACCAGCCTGGTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR GCA 90 bp TGTCACTTTAGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCTGTTaGCTTGATATGAATGTGACTAGACACAGGCAGATAAAACACCCA +
Preference number: 1 (lower is better)
Translates to: CHFSSRASATLFWLC*LDMNVTRHRQIKHP
Trigger: TGGGTGTTTTATCTGCCTGTGTCTAGTCACATTCATATCAAGGCAACAGAGCCAGAAGAGGGTGGCAGATGCCCTGGAACTAAAGTGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp CCAACCCAATTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGTGGTaGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAG +
Preference number: 1 (lower is better)
Translates to: PTQFPENKCELLVRW*WHTPLIPAPKRQKQ
Trigger: CTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCACCTAACTAAAAGCTCACACTTATTTTCAGGAAATTGGGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp GCACCAACCCAATTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGTaGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAG +
Preference number: 1 (lower is better)
Translates to: APTQFPENKCELLVR*WWHTPLIPAPKRQK
Trigger: CTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCACCTAACTAAAAGCTCACACTTATTTTCAGGAAATTGGGTTGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp ATCCACAGGCACAGCCGAGAACACCAACTGACCTCACCTCTTTTATaGTCAGTGTCTCAGGAACTGCTACCTAGTATCACTTATAAACAA +
Preference number: 1 (lower is better)
Translates to: IHRHSREHQLTSPLL*SVSQELLPSITYKQ
Trigger: TTGTTTATAAGTGATACTAGGTAGCAGTTCCTGAGACACTGACCATAAAAGAGGTGAGGTCAGTTGGTGTTCTCGGCTGTGCCTGTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 90 bp AAATTATTACCTGATAGTAAGTGTTCCAACAGAAAACCTATTTTGTaGGCCATTCTTGGTCCCAGAGGCATTTCTGGAGTTAGAGAACTA +
Preference number: 1 (lower is better)
Translates to: KLLPDSKCSNRKPIL*AILGPRGISGVREL
Trigger: TAGTTCTCTAACTCCAGAAATGCCTCTGGGACCAAGAATGGCCCACAAAATAGGTTTTCTGTTGGAACACTTACTATCAGGTAATAATTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCCTTTCCAGGCACAGTTaGAGGCACCTAGCAGGGTGG +
Preference number: 2 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSLSRHS*RHLAGW
Trigger: CCACCCTGCTAGGTGCCTGCAACTGTGCCTGGAAAG...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCACAGGTACACGCCACTaGGTGGAGGGCTTCTGTTAC +
Preference number: 2 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFTGTRH*VEGFCY
Trigger: GTAACAGAAGCCCTCCACCCAGTGGCGTGTACCTGT...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGCAAAGTAGCCACCTGTaGGGCAGGGTCCTCCCACAG +
Preference number: 2 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRQSSHL*GRVLPQ
Trigger: CTGTGGGAGGACCCTGCCCCACAGGTGGCTACTTTG...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR TCA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGACCCCAGTCCTGGGATaGCCCTCATGCCTCCACAAA +
Preference number: 2 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLTPVLG*PSCLHK
Trigger: TTTGTGGAGGCATGAGGGTCATCCCAGGACTGGGGT...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCTCTGAGGGACCAGGCTaGTTTCTCACCTCCTCTGTT +
Preference number: 2 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFSEGPG*FLTSSV
Trigger: AACAGAGGAGGTGAGAAACCAGCCTGGTCCCTCAGA...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 90 bp CTTGCTACTGAGCCCAGTGCACTGTCTCCTCTCTTGCTCCTGGTTTaGACTTATGGTGGGGTAGAGAGCCCAGGTAGTGCCACATCCACC +
Preference number: 2 (lower is better)
Translates to: LATEPSALSPLLLLV*TYGGVESPGSATST
Trigger: GGTGGATGTGGCACTACCTGGGCTCTCTACCCCACCATAAGTCAAAACCAGGAGCAAGAGAGGAGACAGTGCACTGGGCTCAGTAGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR TCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCAGAGGAATGTCCTCTaGGGGACCAGGCTGGTTTCT +
Preference number: 2 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDQRNVL*GTRLVS
Trigger: AGAAACCAGCCTGGTCCCTCAGAGGACATTCCTCTG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATTCAGCAAAGCCCGAGTaGGAGTCAGAGATCACACGC +
Preference number: 2 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHSAKPE*ESEITR
Trigger: GCGTGTGATCTCTGACTCCCACTCGGGCTTTGCTGA...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 90 bp GGCTCAGCGACTTGCCAGATGGCAGAACTGACCGTGACAGAGGCCTaGCCTAGGTCTAACCTTAGACAGCAGCACAACCAAGAGGAAAAA +
Preference number: 2 (lower is better)
Translates to: GSATCQMAELTVTEA*PRSNLRQQHNQEEK
Trigger: TTTTTCCTCTTGGTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTCTGCCATCTGGCAAGTCGCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 90 bp TTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTaGCAGGCACCTAGCAGGGTGGCTCAGTCCTCGTATATAAGTGCA +
Preference number: 2 (lower is better)
Translates to: FFHSAFLESPSFQAQ*QAPSRVAQSSYISA
Trigger: TGCACTTATATACGAGGACTGAGCCACCCTGCTAGGTGCCTGCAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR TCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATTGGATAACCAGAGAGTaGACGAAAGAGCTCACCGGC +
Preference number: 2 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHWITRE*TKELTG
Trigger: GCCGGTGAGCTCTTTCGTTCACTCTCTGGTTATCCA...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATTCATGCCTCCACAAATaGCACAGTAACACAGGGGAC +
Preference number: 2 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDSCLHK*HSNTGD
Trigger: GTCCCCTGTGTTACTGTGGCATTTGTGGAGGCATGA...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCAGTAGACACCATAATCAAGCACCTGAGACTTAGAGAAATGGACACTCCTGCACCCCTACCCCAGTCCTaGGATGACCCTCATGCCTCC +
Preference number: 2 (lower is better)
Translates to: PVDTIIKHLRLREMDTPAPLPQS*DDPHAS
Trigger: GGAGGCATGAGGGTCATCCCAGGACTGGGGTAGGGG...TGCAGGAGTGTCCATTTCTCTAAGTCTCAGGTGCTTGATTATGGTGTCTACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp GGACACTCCTGCACAACCATCACTAGCCAAGATCCACAGGCACAGCCGAGAACAGGGCTTCTGTTACAATaGAGTCAGCTCACAGAGGAA +
Preference number: 2 (lower is better)
Translates to: GHSCTTITSQDPQAQPRTGLLLQ*SQLTEE
Trigger: TTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCC...TGTTCTCGGCTGTGCCTGTGGATCTTGGCTAGTGATGGTTGTGCAGGAGTGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGCCTCTGTTCATTAAATaGCCAGTCTTACAGGCAGAG +
Preference number: 2 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRPLFIK*PVLQAE
Trigger: CTCTGCCTGTAAGACTGGCCATTTAATGAACAGAGG...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 90 bp GACATTTCACAATATTCAGAAACAGACGGAAGGACTCCCTCACACTaGCTACTGAGCCCAGTGCACTGTCTCCTCTCTTGCTCCTGGTTT +
Preference number: 2 (lower is better)
Translates to: DISQYSETDGRTPSH*LLSPVHCLLSCSWF
Trigger: AAACCAGGAGCAAGAGAGGAGACAGTGCACTGGGCTCAGTAGCAAGTGTGAGGGAGTCCTTCCGTCTGTTTCTGAATATTGTGAAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR TCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTAATCATTCAGCAGTaGGTGAAACTCAGTAACCAA +
Preference number: 2 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHVIIQQ*VKLSNQ
Trigger: TTGGTTACTGAGTTTCACTCACTGCTGAATGATTAC...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTGCTCTCCCTAAGGTGTaGCAGCAACAGCACCAACCC +
Preference number: 2 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIALPKV*QQQHQP
Trigger: GGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGC...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTAGAGGCAGAAGCAGGTaGATCCTTGAGTTCAAGGCC +
Preference number: 2 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIRGRSR*ILEFKA
Trigger: GGCCTTGAACTCAAGGATCCACCTGCTTCTGCCTCT...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR TCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTAGGGCACTCATCTTCTaGTTCAAAGTAGCCACCTGT +
Preference number: 2 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIRALIF*FKVATC
Trigger: ACAGGTGGCTACTTTGAATCAGAAGATGAGTGCCCT...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp CCAGTAGACACCATAATCAAGCACCTGAGACTTAGAGAAATGGACACTCCTGCATCACTTATAAACAACTaGGTTTCCTGTCTCTTGCTT +
Preference number: 2 (lower is better)
Translates to: PVDTIIKHLRLREMDTPASLINN*VSCLLL
Trigger: AAGCAAGAGACAGGAAACCCAGTTGTTTATAAGTGA...TGCAGGAGTGTCCATTTCTCTAAGTCTCAGGTGCTTGATTATGGTGTCTACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTAAAACAGCAATGATTTaGGATCAAGAAGCCAATTTG +
Preference number: 2 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIKTAMI*DQEANL
Trigger: CAAATTGGCTTCTTGATCCCAAATCATTGCTGTTTT...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp CAGGGCACTCATCTTCTGATTCAAAGTAGCCACCTGTaGGGCAGGGTCCTCCCACAGCCTGTGGCTCAGCAG +
Preference number: 3 (lower is better)
Translates to: QGTHLLIQSSHL*GRVLPQPVAQQ
Trigger: CTGCTGAGCCACAGGCTGTGGGAGGACCCTGCCCCACAGGTGGCTACTTTGAATCAGAAGATGAGTGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp AGGATCAGGCCCATCCGCTCCTGGATAACCAGAGAGTaGACGAAAGAGCTCACCGGCGCCTCACGCATGAAG +
Preference number: 3 (lower is better)
Translates to: RIRPIRSWITRE*TKELTGASRMK
Trigger: CTTCATGCGTGAGGCGCCGGTGAGCTCTTTCGTTCACTCTCTGGTTATCCAGGAGCGGATGGGCCTGATCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR GCA 72 bp GCAAAGCCCGAGTGGGAGTCAGAGATCACACGCCTCTaGAGCTCAGAACCCAAGTCAGTGACTTGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: AKPEWESEITRL*SSEPKSVTCLW
Trigger: CCACAGGCAAGTCACTGACTTGGGTTCTGAGCTGCAGAGGCGTGTGATCTCTGACTCCCACTCGGGCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp AAGATGACCTCTGGGGACCTCAGCAAGACACAGGCATaGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTA +
Preference number: 3 (lower is better)
Translates to: KMTSGDLSKTQA*PEGMRTPEQGL
Trigger: TAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGTCTTGCTGAGGTCCCCAGAGGTCATCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CAA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGTCTTTCCAGGCACAGTaGCAGGCACCTAGCAGGGTG +
Preference number: 3 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRSFQAQ*QAPSRV
Trigger: CACCCTGCTAGGTGCCTGCAACTGTGCCTGGAAAGA...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp ATGTGGGCCAAACCTGGAGAGTCTCAAGCTGGAAGATaGCCTCTGGGGACCTCAGCAAGACACAGGCATGGC +
Preference number: 3 (lower is better)
Translates to: MWAKPGESQAGR*PLGTSARHRHG
Trigger: GCCATGCCTGTGTCTTGCTGAGGTCCCCAGAGGTCATCTTCCAGCTTGAGACTCTCCAGGTTTGGCCCACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp GTGCCACATCCACCTACTAGGCATGTGGGCCAAACCTaGAGAGTCTCAAGCTGGAAGATGACCTCTGGGGAC +
Preference number: 3 (lower is better)
Translates to: VPHPPTRHVGQT*RVSSWKMTSGD
Trigger: GTCCCCAGAGGTCATCTTCCAGCTTGAGACTCTCCAGGTTTGGCCCACATGCCTAGTAGGTGGATGTGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp AGTGCACTCGAGGTAACCCCTACCCCAGTCCTGGGATaGCCCTCATGCCTCCACAAATGCCACAGTAACACA +
Preference number: 3 (lower is better)
Translates to: SALEVTPTPVLG*PSCLHKCHSNT
Trigger: TGTGTTACTGTGGCATTTGTGGAGGCATGAGGGTCATCCCAGGACTGGGGTAGGGGTTACCTCGAGTGCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp AGGTACACGCCACTGGGTGGAGGGCTTCTGTTACAATaGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: RYTPLGGGLLLQ*SQLTEECPLRD
Trigger: GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCCACCCAGTGGCGTGTACCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp AGCCAATTTGACCGCAGTGTGACAGGTACACGCCACTaGGTGGAGGGCTTCTGTTACAATGGAGTCAGCTCA +
Preference number: 3 (lower is better)
Translates to: SQFDRSVTGTRH*VEGFCYNGVSS
Trigger: TGAGCTGACTCCATTGTAACAGAAGCCCTCCACCCAGTGGCGTGTACCTGTCACACTGCGGTCAAATTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp AGAGGTAACAAGAGGCGATTCTCAGCAAAGCCCGAGTaGGAGTCAGAGATCACACGCCTCTGCAGCTCAGAA +
Preference number: 3 (lower is better)
Translates to: RGNKRRFSAKPE*ESEITRLCSSE
Trigger: TTCTGAGCTGCAGAGGCGTGTGATCTCTGACTCCCACTCGGGCTTTGCTGAGAATCGCCTCTTGTTACCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR GCA 72 bp TGGGGTTCTCATGACCACACTCCGAGAGCTAAGATATaGCTATGGTGTCCATGTGGATGGAGAACAGCCCTC +
Preference number: 3 (lower is better)
Translates to: WGSHDHTPRAKI*LWCPCGWRTAL
Trigger: GAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATCTTAGCTCTCGGAGTGTGGTCATGAGAACCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp CCGAGAGCTAAGATATGCCTATGGTGTCCATGTGGATaGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGA +
Preference number: 3 (lower is better)
Translates to: PRAKICLWCPCG*RTALPSLSMLG
Trigger: TCCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATCTTAGCTCTCGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp TGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTaGGGGACCAGGCTGGTTTCTCACCTCCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: CYNGVSSQRNVL*GTRLVSHLLCS
Trigger: TGAACAGAGGAGGTGAGAAACCAGCCTGGTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp AGATCACACGCCTCTGCAGCTCAGAACCCAAGTCAGTaGCTTGCCTGTGGTAATCATTCAGCAGTGAGTGAA +
Preference number: 3 (lower is better)
Translates to: RSHASAAQNPSQ*LACGNHSAVSE
Trigger: TTCACTCACTGCTGAATGATTACCACAGGCAAGTCACTGACTTGGGTTCTGAGCTGCAGAGGCGTGTGATCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR GCA 72 bp AGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCTGTTaGCTTGATATGAATGTGACTAGACACAGGCAGATA +
Preference number: 3 (lower is better)
Translates to: SSRASATLFWLC*LDMNVTRHRQI
Trigger: TATCTGCCTGTGTCTAGTCACATTCATATCAAGGCAACAGAGCCAGAAGAGGGTGGCAGATGCCCTGGAACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp CACAGCCGAGAACACCAACTGACCTCACCTCTTTTATaGTCAGTGTCTCAGGAACTGCTACCTAGTATCACT +
Preference number: 3 (lower is better)
Translates to: HSREHQLTSPLL*SVSQELLPSIT
Trigger: AGTGATACTAGGTAGCAGTTCCTGAGACACTGACCATAAAAGAGGTGAGGTCAGTTGGTGTTCTCGGCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp CCTGAAAATAAGTGTGAGCTTTTAGTTAGGTGGTGGTaGCACACACCTCTAATACCAGCACCCAAGAGGCAG +
Preference number: 3 (lower is better)
Translates to: PENKCELLVRWW*HTPLIPAPKRQ
Trigger: CTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCACCTAACTAAAAGCTCACACTTATTTTCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR-3UTR CAA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTGGTTCCTGTCTGCCCTaGGCATCAAGTCTCCTGCTA +
Preference number: 3 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIGSCLP*ASSLLL
Trigger: TAGCAGGAGACTTGATGCCAAGGGCAGACAGGAACC...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp TTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGTGGTaGTGGCACACACCTCTAATACCAGCACCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: FPENKCELLVRW*WHTPLIPAPKR
Trigger: CCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCACCTAACTAAAAGCTCACACTTATTTTCAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CCA 72 bp CAATTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGTaGTGGTGGCACACACCTCTAATACCAGCACCCAAG +
Preference number: 3 (lower is better)
Translates to: QFPENKCELLVR*WWHTPLIPAPK
Trigger: CTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCACCTAACTAAAAGCTCACACTTATTTTCAGGAAATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp ATAAACTCAAACTTTATTGCTTTGGGGCAGGGGAGCTaGAGAGATGGCTCAGTGATTATGAGCCAAGTTTCA +
Preference number: 3 (lower is better)
Translates to: INSNFIALGQGS*RDGSVIMSQVS
Trigger: TGAAACTTGGCTCATAATCACTGAGCCATCTCTTCAGCTCCCCTGCCCCAAAGCAATAAAGTTTGAGTTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR TCA 72 bp CAAGTCAGTGACTTGCCTGTGGTAATCATTCAGCAGTaGGTGAAACTCAGTAACCAAATATGCGACATTAGA +
Preference number: 3 (lower is better)
Translates to: QVSDLPVVIIQQ*VKLSNQICDIR
Trigger: TCTAATGTCGCATATTTGGTTACTGAGTTTCACTCACTGCTGAATGATTACCACAGGCAAGTCACTGACTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR GCA 72 bp ACAATTTTGGGTCTGGCTACCTCCTCATCCATAAGATaGAAACCACATTTTTCATTCGGTCACAGAAGTTAT +
Preference number: 3 (lower is better)
Translates to: TILGLATSSSIR*KPHFSFGHRSY
Trigger: ATAACTTCTGTGACCGAATGAAAAATGTGGTTTGCATCTTATGGATGAGGAGGTAGCCAGACCCAAAATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCAGCTGCTGCAGTTGCTaGAGCTGCCGCAGCCGGCGC +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSSCCSC*SCRSRR
Trigger: GCGCCGGCTGCGGCAGCTGCAGCAACTGCAGCAGCT...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGATGCTCGCGATGCCGTaGCGGCTGCTCGGTCGTGCC +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKMLAMP*RLLGRA
Trigger: GGCACGACCGAGCAGCCGCCACGGCATCGCGAGCAT...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCTCCACAGTGAGGCCTTaGAGGTCCCGGGCACTGTAC +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSSTVRP*RSRALY
Trigger: GTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGA...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCGGAGCTGCTGCAGTTaGTGCAGCTGCCGCAGCCGG +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDRSCCS*CSCRSR
Trigger: CCGGCTGCGGCAGCTGCAGCAACTGCAGCAGCTCCG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCCTGTCTCGGAGCTGCTaGAGTTGCTGCAGCTGCCGC +
Preference number: 4 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFLSRSC*SCCSCR
Trigger: GCGGCAGCTGCAGCAACTGCAGCAGCTCCGAGACAG...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATGGAGCAGTGCCACGGTaGCCAGGGGCGTGTCACTGG +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDGAVPR*PGACHW
Trigger: CCAGTGACACGCCCCTGGGCACCGTGGCACTGCTCC...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGTGGCATGTTCCACAGTaGGGCCTTGCAGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKWHVPQ*GLAGPG
Trigger: CCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCA...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATTGCAGTTGCTGCAGCTaGCGCAGCCGGCGCCCCTTC +
Preference number: 4 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHCSCCS*RSRRPF
Trigger: GAAGGGGCGCCGGCTGCGGCAGCTGCAGCAACTGCA...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCCTGCTCCTCGCGGTTaGCAGCCAACCCGTAGGTGG +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDPAPRG*QPTRRW
Trigger: CCACCTACGGGTTGGCTGGCAACCGCGAGGAGCAGG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCGTCTTCTGGGCCTTCTaGTTCTCCTGGAGCAGTGCC +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSVFWAF*FSWSSA
Trigger: GGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGAC...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGCGCCAGAGCTGGCTTTaGAGCTGGCAGCGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRRQSWL*SWQRPR
Trigger: ACGAGGCCGCTGCCAGCTCCAAAGCCAGCTCTGGCG...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCTCCTCCCAGCCGCGCTaGCGAGACTCCAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFSSQPR*RDSSFF
Trigger: GAAGAAACTGGAGTCTCGCCAGCGCGGCTGGGAGGA...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGCAGCCAACCCGTAGGTaGGGATCTCCCCCAGCGTGC +
Preference number: 4 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLQPTRR*GSPPAC
Trigger: GCACGCTGGGGGAGATCCCCACCTACGGGTTGGCTG...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGGCCTTCTGCTTCTCCTaGAGCAGTGCCACGGTGCCC +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKAFCFS*SSATVP
Trigger: GGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGC...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGCCATCTCCTCGGGACTaGGGTACTCAGAGGCAAGCC +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKPSPRD*GTQRQA
Trigger: GGCTTGCCTCTGAGTACCTCAGTCCCGAGGAGATGG...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCCCTCTCTATCCAGGCTaGAGTATCATCCAGCCAGGG +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSPLYPG*SIIQPG
Trigger: CCCTGGCTGGATGATACTGCAGCCTGGATAGAGAGG...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATCTTCTCCTGGAGCAGTaGCACGGTGCCCAGGGGCGT +
Preference number: 4 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHLLLEQ*HGAQGR
Trigger: ACGCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAG...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp GGACACTCCTGCACAACCATCACTAGCCAAGATCCACAGGCACAGCCGAGAACAACGGAGCTCAGAGACTaGGCCTGCAGCCGTAGCTTG +
Preference number: 4 (lower is better)
Translates to: GHSCTTITSQDPQAQPRTTELRD*ACSRSL
Trigger: CAAGCTACGGCTGCAGGCTCAGTCTCTGAGCTCCGT...TGTTCTCGGCTGTGCCTGTGGATCTTGGCTAGTGATGGTTGTGCAGGAGTGTCC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp CTCATAACCATCTGTCACTTTAGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCCCAAAGTCCCCATCCTaGGTCTGGTCGCCCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LITICHFSSRASATLFWLPKSPS*VWSPRG
Trigger: GCCCCTGGGCGACCAGACTCAGGATGGGGACTTTGG...GAGCCAGAAGAGGGTGGCAGATGCCCTGGAACTAAAGTGACAGATGGTTATGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GGAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACTGCTGCCGCCGCCGCTaGTCCGGTGCTTGTGTTTCT +
Preference number: 4 (lower is better)
Translates to: GGLLLQWSQLTEECPLRDCCRRR*SGACVS
Trigger: AGAAACACAAGCACCGGAGCAGCGGCGGCGGCAGCA...GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGACGTCCTCCCCGTCCTaGAGTACCCCTTTGTCCTTG +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKTSSPS*STPLSL
Trigger: CAAGGACAAAGGGGTACTGCAGGACGGGGAGGACGT...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GAACTGACCGTGACAGAGGCCTTGCCTAGGTCTAACCTTAGACAGCAGCACAACCTGCAGCTCCAGCTCTaGCTCGTCTTCCTCCAGCCC +
Preference number: 4 (lower is better)
Translates to: ELTVTEALPRSNLRQQHNLQLQL*LVFLQP
Trigger: GGGCTGGAGGAAGACGAGGCAGAGCTGGAGCTGCAG...GTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GGAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACAGGCATCGCCAGAGCTaGCTTTGGAGCTGGCAGCGG +
Preference number: 4 (lower is better)
Translates to: GGLLLQWSQLTEECPLRDRHRQS*LWSWQR
Trigger: CCGCTGCCAGCTCCAAAGCCAGCTCTGGCGATGCCT...GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCGCAAGCGTTTTTCCTTaGCAGCTGCCAGCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFASVFP*QLPASP
Trigger: GGGAGAAGCTGGCAGCTGCCAAGGAAAAACGCTTGC...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATTTTCCGTGGAAGCGGTaGGACAGCTGCCGGAATGCC +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDFPWKR*DSCRNA
Trigger: GGCATTCCGGCAGCTGTCCCACCGCTTCCACGGAAA...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCTTCTCTTTCTGTAGCTaGCGGCTCCTCTCTATCCAG +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSFSFCS*RLLSIQ
Trigger: CTGGATAGAGAGGAGCCGGCAGCTACAGAAAGAGAA...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGCAGACGGAAGGAATGTaGTCGCTCGCCCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLQTEGM*SLALQF
Trigger: GAACTGGAGGGCGAGCGACCACATTCCTTCCGTCTG...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp AGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTaGCAGGCACCTAGCAGGGTGGCTCAGTCCTCGTAT +
Preference number: 4 (lower is better)
Translates to: SAFLESPSFQAQ*QAPSRVAQSSY
Trigger: ATACGAGGACTGAGCCACCCTGCTAGGTGCCTGCAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp GAGCCCAGTGCACTGTCTCCTCTCTTGCTCCTGGTTTaGACTTATGGTGGGGTAGAGAGCCCAGGTAGTGCC +
Preference number: 4 (lower is better)
Translates to: EPSALSPLLLLV*TYGGVESPGSA
Trigger: GGCACTACCTGGGCTCTCTACCCCACCATAAGTCAAAACCAGGAGCAAGAGAGGAGACAGTGCACTGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGTCCGTTTGGTCTTCTTaGAGGTCACCATCTCCTCGG +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKSVWSS*RSPSPR
Trigger: CCGAGGAGATGGTGACCTTCAAGAAGACCAAACGGA...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp GGACACTCCTGCACAACCATCACTAGCCAAGATCCACAGGCACAGCCGAGAACAAGTCTTCATCTTGCCTaGGCCCTTTCCGTGGAAGCG +
Preference number: 4 (lower is better)
Translates to: GHSCTTITSQDPQAQPRTSLHLA*ALSVEA
Trigger: CGCTTCCACGGAAAGGGCTCAGGCAAGATGAAGACT...TGTTCTCGGCTGTGCCTGTGGATCTTGGCTAGTGATGGTTGTGCAGGAGTGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATGTTGATAACATCGGCTaGCACGGGCTCCTCCTTGGT +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDVDNIG*HGLLLG
Trigger: ACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAAC...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGGGACAGCTGCCGGAATaGCTCCTTGGGAGTCAGTTT +
Preference number: 4 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLGQLPE*LLGSQF
Trigger: AAACTGACTCCCAAGGAGGCATTCCGGCAGCTGTCC...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCCTCACACCAAACTCTTaGTCCATCTCCTCTAGTAGC +
Preference number: 4 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSLTPNS*SISSSS
Trigger: GCTACTAGAGGAGATGGACCAAGAGTTTGGTGTGAG...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGTTCTCCTTGAAGTCCTaGGTGAAGCCCCTGTACTCC +
Preference number: 4 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKFSLKS*VKPLYS
Trigger: GGAGTACAGGGGCTTCACCCAGGACTTCAAGGAGAA...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGCTTAGCCCGCTTCTCTaGCAGGTCCTTCTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLLSPLL*QVLLFL
Trigger: CAGAAAGAGAAGGACCTGGCAGAGAAGCGGGCTAAG...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GGAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACAGGTCCTGTCGCCTCTaGTCAAACTCCTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: GGLLLQWSQLTEECPLRDRSCRL*SNSSST
Trigger: AGTGGAGGAGGAGTTTGAGCAGAGGCGACAGGACCT...GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CTCATAACCATCTGTCACTTTAGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCTCGGCCATCCCACCCTaGTCCAGACGGAAGGAATGT +
Preference number: 4 (lower is better)
Translates to: LITICHFSSRASATLFWLSAIPP*SRRKEC
Trigger: ACATTCCTTCCGTCTGGAGCAGGGTGGGATGGCCGA...GAGCCAGAAGAGGGTGGCAGATGCCCTGGAACTAAAGTGACAGATGGTTATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCCAGGGGCGTGTCACTaGAGCTCATTTTCTTCAGGA +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDPGACH*SSFSSG
Trigger: TCCTGAAGAAAATGAGCTCCAGTGACACGCCCCTGG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GAACTGACCGTGACAGAGGCCTTGCCTAGGTCTAACCTTAGACAGCAGCACAACGGGCAGCAAGTCATCTaGCCGCATTATCACCTCCTT +
Preference number: 4 (lower is better)
Translates to: ELTVTEALPRSNLRQQHNGQQVI*PHYHLL
Trigger: AAGGAGGTGATAATGCGGGCAGATGACTTGCTGCCC...GTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGCCATCTTATCCTCGATaGAGTACACTGCTGAGGGCA +
Preference number: 4 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRPSYPR*STLLRA
Trigger: TGCCCTCAGCAGTGTACTGCATCGAGGATAAGATGG...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GATATGCCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGCTCAGTCTTCATCTTaGCTGAGCCCTTTCCGTGGA +
Preference number: 4 (lower is better)
Translates to: DMPMVSMWMENSPPFPLHAQSSS*LSPFRG
Trigger: TCCACGGAAAGGGCTCAGGCAAGATGAAGACTGAGC...ATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGGCATATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp ACTTGCCAGATGGCAGAACTGACCGTGACAGAGGCCTaGCCTAGGTCTAACCTTAGACAGCAGCACAACCAA +
Preference number: 4 (lower is better)
Translates to: TCQMAELTVTEA*PRSNLRQQHNQ
Trigger: TTGGTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTCTGCCATCTGGCAAGT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp ACACTTGCTACTGAGCCCAGTGCACTGTCTCCTCTCTaGCTCCTGGTTTTGACTTATGGTGGGGTAGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLATEPSALSPL*LLVLTYGGVES
Trigger: GCTCTCTACCCCACCATAAGTCAAAACCAGGAGCAAGAGAGGAGACAGTGCACTGGGCTCAGTAGCAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCTTCAGCCCCAACTTTaGTCGGAGTTTATTGGTCTC +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDLQPQL*SEFIGL
Trigger: GAGACCAATAAACTCCGAGCAAAGTTGGGGCTGAAG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp CTCATAACCATCTGTCACTTTAGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCTTTTTCCTTGGCAGCTaGCAGCTTCTCCCGCAGTTC +
Preference number: 4 (lower is better)
Translates to: LITICHFSSRASATLFWLFFLGS*QLLPQF
Trigger: GAACTGCGGGAGAAGCTGGCAGCTGCCAAGGAAAAA...GAGCCAGAAGAGGGTGGCAGATGCCCTGGAACTAAAGTGACAGATGGTTATGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATACGAGGTTTTTGCTGTaGCAAATCGTCCACACTCTC +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDTRFLL*QIVHTL
Trigger: GAGAGTGTGGACGATTTGGCACAGCAAAAACCTCGT...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GAACTGACCGTGACAGAGGCCTTGCCTAGGTCTAACCTTAGACAGCAGCACAACTGGGAGTCAGTTTCCTaGCCGTCTCATCCACGTATT +
Preference number: 4 (lower is better)
Translates to: ELTVTEALPRSNLRQQHNWESVS*PSHPRI
Trigger: AATACGTGGATGAGACGGGCAGGAAACTGACTCCCA...GTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CCAGTAGACACCATAATCAAGCACCTGAGACTTAGAGAAATGGACACTCCTGCAATTCAGAGCCACCGTTaGCCGAGCGCTCCTCATCCC +
Preference number: 4 (lower is better)
Translates to: PVDTIIKHLRLREMDTPAIQSHR*PSAPHP
Trigger: GGGATGAGGAGCGCTCGGCCAACGGTGGCTCTGAAT...TGCAGGAGTGTCCATTTCTCTAAGTCTCAGGTGCTTGATTATGGTGTCTACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCTGTACTTGTCATCAATaGCCATCTTATCCTCGATGC +
Preference number: 4 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFCTCHQ*PSYPRC
Trigger: GCATCGAGGATAAGATGGCCATTGATGACAAGTACA...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GGAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACATATACGGTGTCTTCTaGGCCTTCTGCTTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GGLLLQWSQLTEECPLRDIYGVF*AFCFSW
Trigger: CCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATAT...GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCATCCTCTTCATCACTaGTGTCCATGTTCTCTACTC +
Preference number: 4 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDHPLHH*CPCSLL
Trigger: GAGTAGAGAACATGGACATCAGTGATGAAGAGGATG...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GAACTGACCGTGACAGAGGCCTTGCCTAGGTCTAACCTTAGACAGCAGCACAACCCTCCTCCACTAAAGTaGTCACACCAAACTCTTGGT +
Preference number: 4 (lower is better)
Translates to: ELTVTEALPRSNLRQQHNPPPLK*SHQTLG
Trigger: ACCAAGAGTTTGGTGTGAGCACTTTAGTGGAGGAGG...GTTGTGCTGCTGTCTAAGGTTAGACCTAGGCAAGGCCTCTGTCACGGTCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp GGAGGGCTTCTGTTACAATGGAGTCAGCTCACAGAGGAATGTCCTCTGAGGGACCCACCTTTTGTACTGTaGTCTCCAGCAGTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: GGLLLQWSQLTEECPLRDPPFVL*SPAVLC
Trigger: ACAAAGGACTGCTGGAGACCACAGTACAAAAGGTGG...GTCCCTCAGAGGACATTCCTCTGTGAGCTGACTCCATTGTAACAGAAGCCCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp CAATATTCAGAAACAGACGGAAGGACTCCCTCACACTaGCTACTGAGCCCAGTGCACTGTCTCCTCTCTTGC +
Preference number: 4 (lower is better)
Translates to: QYSETDGRTPSH*LLSPVHCLLSC
Trigger: GCAAGAGAGGAGACAGTGCACTGGGCTCAGTAGCAAGTGTGAGGGAGTCCTTCCGTCTGTTTCTGAATATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTCCTGAGCCCTTTCCGTaGAAGCGGTGGGACAGCTGC +
Preference number: 4 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIPEPFP*KRWDSC
Trigger: GCAGCTGTCCCACCGCTTCCACGGAAAGGGCTCAGG...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp AATACCAGCACCCAAGAGGCAGAAGCAGGTGGATCCTaGAGTTCAAGGCCAGACTGTTCTACAGAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: NTSTQEAEAGGS*SSRPDCSTEFH
Trigger: ATGGAACTCTGTAGAACAGTCTGGCCTTGAACTCAAGGATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR GCA 90 bp GCAGCAACAGCACCAACCCAATTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGCCGCCGCTGCTCCGGTaGTTGTGTTTCTTATGCTCG +
Preference number: 4 (lower is better)
Translates to: AATAPTQFPENKCELLVRPPLLR*LCFLCS
Trigger: CGAGCATAAGAAACACAAGCACCGGAGCAGCGGCGG...CCTAACTAAAAGCTCACACTTATTTTCAGGAAATTGGGTTGGTGCTGTTGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR TCA 90 bp TTTTTCATTCGGTCACAGAAGTTATTGACCCATTCTGTCAATGGGTGTGGCATTCCCTTTCAAAGTCCATaGGCTCTTCCTGCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: FFIRSQKLLTHSVNGCGIPFQSP*ALPAPR
Trigger: GCGAGGAGCAGGAAGAGCTCATGGACTTTGAAAGGG...AATGCCACACCCATTGACAGAATGGGTCAATAACTTCTGTGACCGAATGAAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp CAACACGCATGTGACCAGTCTGAAAACAGCAATGATTaGGGATCAAGAAGCCAATTTGACCGCAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: QHACDQSENSND*GSRSQFDRSVT
Trigger: TGTCACACTGCGGTCAAATTGGCTTCTTGATCCCAAATCATTGCTGTTTTCAGACTGGTCACATGCGTGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp TGTCTATTAGGTTGCAGATTGGAAGCAGGAACAATTTaGGGTCTGGCTACCTCCTCATCCATAAGATGCAAA +
Preference number: 4 (lower is better)
Translates to: CLLGCRLEAGTI*GLATSSSIRCK
Trigger: TTTGCATCTTATGGATGAGGAGGTAGCCAGACCCAAAATTGTTCCTGCTTCCAATCTGCAACCTAATAGACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
3UTR CAA 72 bp TTACCTGATAGTAAGTGTTCCAACAGAAAACCTATTTaGTGGGCCATTCTTGGTCCCAGAGGCATTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LPDSKCSNRKPI*WAILGPRGISG
Trigger: TCCAGAAATGCCTCTGGGACCAAGAATGGCCCACAAAATAGGTTTTCTGTTGGAACACTTACTATCAGGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp GCTCCGAGGGCTCCGCTTGGCTTCGTTCGCGACCGTGCGCGCCGCTaGGGGCCTCGGCTTCCGCCCCACGCCGCCCGCTCCCGCGCTCAC +
Preference number: 5 (lower is better)
Translates to: APRAPLGFVRDRARR*GPRLPPHAARSRAH
Trigger: GTGAGCGCGGGAGCGGGCGGCGTGGGGCGGAAGCCGAGGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp TTCACGCGCCGCTCCGAGGGCTCCGCTTGGCTTCGTTCGCGACCGTaGGCGCCGCTGCGGGCCTCGGCTTCCGCCCCACGCCGCCCGCTC +
Preference number: 5 (lower is better)
Translates to: FTRRSEGSAWLRSRP*APLRASASAPRRPL
Trigger: GAGCGGGCGGCGTGGGGCGGAAGCCGAGGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGCGGCGCGTGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp CTGCCGCCGCCGCTGCTCCGGTGCTTGTGTTTCTTATGCTCGCGATaGCGTGGCGGCTGCTCGGTCGTGCCCCCAGTCCCGGCCGCAGCC +
Preference number: 5 (lower is better)
Translates to: LPPPLLRCLCFLCSR*RGGCSVVPPVPAAA
Trigger: GGCTGCGGCCGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGAAACACAAGCACCGGAGCAGCGGCGGCGGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp TCATCGCGTTTCTCCCGCTTCACGCGCCGCTCCGAGGGCTCCGCTTaGCTTCGTTCGCGACCGTGCGCGCCGCTGCGGGCCTCGGCTTCC +
Preference number: 5 (lower is better)
Translates to: SSRFSRFTRRSEGSA*LRSRPCAPLRASAS
Trigger: GGAAGCCGAGGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGCGGCGCGTGAAGCGGGAGAAACGCGATGA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp CTGCTCCGGTGCTTGTGTTTCTTATGCTCGCGATGCCGTGGCGGCTaGTCGGTCGTGCCCCCAGTCCCGGCCGCAGCCGTCGTCCCGGCC +
Preference number: 5 (lower is better)
Translates to: LLRCLCFLCSRCRGG*SVVPPVPAAAVVPA
Trigger: GGCCGGGACGACGGCTGCGGCCGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGAAACACAAGCACCGGAGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp GCCGCCGCTGCTCCGGTGCTTGTGTTTCTTATGCTCGCGATGCCGTaGCGGCTGCTCGGTCGTGCCCCCAGTCCCGGCCGCAGCCGTCGT +
Preference number: 5 (lower is better)
Translates to: AAAAPVLVFLMLAMP*RLLGRAPSPGRSRR
Trigger: ACGACGGCTGCGGCCGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGAAACACAAGCACCGGAGCAGCGGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp ATCTCCAGCACCTTCTCACCACTGTCTCGGAGCTGCTGCAGTTGCTaGAGCTGCCGCAGCCGGCGCCCCTTCTCCAGCTGCTTCTGCAGC +
Preference number: 5 (lower is better)
Translates to: ISSTFSPLSRSCCSC*SCRSRRPFSSCFCS
Trigger: GCTGCAGAAGCAGCTGGAGAAGGGGCGCCGGCTGCGGCAGCTGCAGCAACTGCAGCAGCTCCGAGACAGTGGTGAGAAGGTGCTGGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp GCCGGGGCCCTACGGAGCTCAGAGACTGAGCCTGCAGCCGTAGCTTaGTGCGGATTTCTTCTAACTCTCGTTCCCTCAGGCCATCGGCCA +
Preference number: 5 (lower is better)
Translates to: AGALRSSETEPAAVA*CGFLLTLVPSGHRP
Trigger: TGGCCGATGGCCTGAGGGAACGAGAGTTAGAAGAAATCCGCACCAAGCTACGGCTGCAGGCTCAGTCTCTGAGCTCCGTAGGGCCCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp CTGCTTCTGCAGCTCCAGCTCTGCCTCGTCTTCCTCCAGCCCCTCTaGGGACCCTGGCGGAAGAGCTCCCCCATCCTCTTCATCACTGAT +
Preference number: 5 (lower is better)
Translates to: LLLQLQLCLVFLQPL*GPWRKSSPILFITD
Trigger: ATCAGTGATGAAGAGGATGGGGGAGCTCTTCCGCCAGGGTCCCCAGAGGGGCTGGAGGAAGACGAGGCAGAGCTGGAGCTGCAGAAGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp GGGGCCCTACGGAGCTCAGAGACTGAGCCTGCAGCCGTAGCTTGGTaGGGATTTCTTCTAACTCTCGTTCCCTCAGGCCATCGGCCATCC +
Preference number: 5 (lower is better)
Translates to: GALRSSETEPAAVAW*GFLLTLVPSGHRPS
Trigger: GGATGGCCGATGGCCTGAGGGAACGAGAGTTAGAAGAAATCCGCACCAAGCTACGGCTGCAGGCTCAGTCTCTGAGCTCCGTAGGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp GCGCCTCCTCATCCAGCTTCTTCATCCGCCGCTCAGTCTTCATCTTaGCTGAGCCCTTTCCGTGGAAGCGGTGGGACAGCTGCCGGAATG +
Preference number: 5 (lower is better)
Translates to: APPHPASSSAAQSSS*LSPFRGSGGTAAGM
Trigger: CATTCCGGCAGCTGTCCCACCGCTTCCACGGAAAGGGCTCAGGCAAGATGAAGACTGAGCGGCGGATGAAGAAGCTGGATGAGGAGGCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp TTGCCACTGCCACTGAGCACGATATACGGTGTCTTCTGGGCCTTCTaGTTCTCCTGGAGCAGTGCCACGGTGCCCAGGGGCGTGTCACTG +
Preference number: 5 (lower is better)
Translates to: LPLPLSTIYGVFWAF*FSWSSATVPRGVSL
Trigger: CAGTGACACGCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTGCTCAGTGGCAGTGGCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCCACCCGGGCCACCTTTaGTACTGTGGTCTCCAGCAG +
Preference number: 5 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSHPGHL*YCGLQQ
Trigger: CTGCTGGAGACCACAGTACAAAAGGTGGCCCGGGTG...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp CCACTGAGCACGATATACGGTGTCTTCTGGGCCTTCTGCTTCTCCTaGAGCAGTGCCACGGTGCCCAGGGGCGTGTCACTGGAGCTCATT +
Preference number: 5 (lower is better)
Translates to: PLSTIYGVFWAFCFS*SSATVPRGVSLELI
Trigger: AATGAGCTCCAGTGACACGCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTGCTCAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp TTCATGCTCTTGCCACTGCCACTGAGCACGATATACGGTGTCTTCTaGGCCTTCTGCTTCTCCTGGAGCAGTGCCACGGTGCCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: FMLLPLPLSTIYGVF*AFCFSWSSATVPRG
Trigger: GCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTGCTCAGTGGCAGTGGCAAGAGCATGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 90 bp CCTCTGGGGACCCTGGCGGAAGAGCTCCCCCATCCTCTTCATCACTaGTGTCCATGTTCTCTACTCGAGTGTCATCCGATGGTGGCGGCT +
Preference number: 5 (lower is better)
Translates to: PLGTLAEELPHPLHH*CPCSLLECHPMVAA
Trigger: AGCCGCCACCATCGGATGACACTCGAGTAGAGAACATGGACATCAGTGATGAAGAGGATGGGGGAGCTCTTCCGCCAGGGTCCCCAGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp CCTCAGGCCATCGGCCATCCCACCCTGCTCCAGACGGAAGGAATGTaGTCGCTCGCCCTCCAGTTCCTCATCATATTTGGCCAGGATAGA +
Preference number: 5 (lower is better)
Translates to: PQAIGHPTLLQTEGM*SLALQFLIIFGQDR
Trigger: TCTATCCTGGCCAAATATGATGAGGAACTGGAGGGCGAGCGACCACATTCCTTCCGTCTGGAGCAGGGTGGGATGGCCGATGGCCTGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp TCTGCTTCTCCTGGAGCAGTGCCACGGTGCCCAGGGGCGTGTCACTaGAGCTCATTTTCTTCAGGAGCGCCTCCTCATCCAGCTTCTTCA +
Preference number: 5 (lower is better)
Translates to: SASPGAVPRCPGACH*SSFSSGAPPHPASS
Trigger: TGAAGAAGCTGGATGAGGAGGCGCTCCTGAAGAAAATGAGCTCCAGTGACACGCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp GCACAGCTGGCGTCAGACTTCTGGGGTTCTCATGACCACACTCCGAGAGCTAAGCGCAAGGCCATGGGGTaGATAACATCGGCTGCCACG +
Preference number: 5 (lower is better)
Translates to: AQLASDFWGSHDHTPRAKRKAMG*ITSAAT
Trigger: CGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCG...CTTAGCTCTCGGAGTGTGGTCATGAGAACCCCAGAAGTCTGACGCCAGCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CCTATGGTGTCCATGTGGATGGAGAACAGCCCTCCCTTCCCTCTCCATGTTAGGGATTCAGAGCCACCGTaGGCCGAGCGCTCCTCATCC +
Preference number: 5 (lower is better)
Translates to: PMVSMWMENSPPFPLHVRDSEPP*AERSSS
Trigger: GGATGAGGAGCGCTCGGCCAACGGTGGCTCTGAATC...CCTAACATGGAGAGGGAAGGGAGGGCTGTTCTCCATCCACATGGACACCATAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCCGCTCAGTCTTCATCTaGCCTGAGCCCTTTCCGTGG +
Preference number: 5 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFRSVFI*PEPFPW
Trigger: CCACGGAAAGGGCTCAGGCAAGATGAAGACTGAGCG...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 90 bp CCCCAACTTTGCTCGGAGTTTATTGGTCTCCTCAATGCTGAGGGATaGGGCATCGCCAGAGCTGGCTTTGGAGCTGGCAGCGGCCTCGTA +
Preference number: 5 (lower is better)
Translates to: PQLCSEFIGLLNAEG*GIARAGFGAGSGLV
Trigger: TACGAGGCCGCTGCCAGCTCCAAAGCCAGCTCTGGCGATGCCTCATCCCTCAGCATTGAGGAGACCAATAAACTCCGAGCAAAGTTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 90 bp CCACAGTCTCCCCTTCTCGAAAAGAATCGATGGCATGTTCCACAGTaGGGCCTTGCAGGTCCCGGGCACTGTACAGGTCCTGTCGCCTCT +
Preference number: 5 (lower is better)
Translates to: PQSPLLEKNRWHVPQ*GLAGPGHCTGPVAS
Trigger: AGAGGCGACAGGACCTGTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCATCGATTCTTTTCGAGAAGGGGAGACTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp AGTAGCTTAGCCCGCTTCTCTGCCAGGTCCTTCTCTTTCTGTAGCTaGCGGCTCCTCTCTATCCAGGCTGCAGTATCATCCAGCCAGGGG +
Preference number: 5 (lower is better)
Translates to: SSLARFSARSFSFCS*RLLSIQAAVSSSQG
Trigger: CCCCTGGCTGGATGATACTGCAGCCTGGATAGAGAGGAGCCGGCAGCTACAGAAAGAGAAGGACCTGGCAGAGAAGCGGGCTAAGCTACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp ATTTCTTCTAACTCTCGTTCCCTCAGGCCATCGGCCATCCCACCCTaGTCCAGACGGAAGGAATGTGGTCGCTCGCCCTCCAGTTCCTCA +
Preference number: 5 (lower is better)
Translates to: ISSNSRSLRPSAIPP*SRRKECGRSPSSSS
Trigger: TGAGGAACTGGAGGGCGAGCGACCACATTCCTTCCGTCTGGAGCAGGGTGGGATGGCCGATGGCCTGAGGGAACGAGAGTTAGAAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp CACGATATACGGTGTCTTCTGGGCCTTCTGCTTCTCCTGGAGCAGTaGCACGGTGCCCAGGGGCGTGTCACTGGAGCTCATTTTCTTCAG +
Preference number: 5 (lower is better)
Translates to: HDIRCLLGLLLLLEQ*HGAQGRVTGAHFLQ
Trigger: CTGAAGAAAATGAGCTCCAGTGACACGCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCAGTACCCCTTTGTCCTaGAGGGTGAGGACCACAGTC +
Preference number: 5 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFSTPLS*RVRTTV
Trigger: GACTGTGGTCCTCACCCTCAAGGACAAAGGGGTACT...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 90 bp TCCCCTTCTCGAAAAGAATCGATGGCATGTTCCACAGTGAGGCCTTaGAGGTCCCGGGCACTGTACAGGTCCTGTCGCCTCTGCTCAAAC +
Preference number: 5 (lower is better)
Translates to: SPSRKESMACSTVRP*RSRALYRSCRLCSN
Trigger: GTTTGAGCAGAGGCGACAGGACCTGTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCATCGATTCTTTTCGAGAAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCGCTTCAGCCCCAACTTaGCTCGGAGTTTATTGGTCT +
Preference number: 5 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSASAPT*LGVYWS
Trigger: AGACCAATAAACTCCGAGCAAAGTTGGGGCTGAAGC...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp TGGTGGTGGCACACACCTCTAATACCAGCACCCAAGAGGCAGAAGCAGGTGGATTCCTGCAGTACCCCTTaGTCCTTGAGGGTGAGGACC +
Preference number: 5 (lower is better)
Translates to: WWWHTPLIPAPKRQKQVDSCSTP*SLRVRT
Trigger: GGTCCTCACCCTCAAGGACAAAGGGGTACTGCAGGA...ATCCACCTGCTTCTGCCTCTTGGGTGCTGGTATTAGAGGTGTGTGCCACCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 90 bp CCCCAACTTTGCTCGGAGTTTATTGGTCTCCTCAATGCTGAGGGATaGGGCATCGCCAGAGCTGGCTTTGGAGCTGGCAGCTGGTTGCTT +
Preference number: 5 (lower is better)
Translates to: PQLCSEFIGLLNAEG*GIARAGFGAGSWLL
Trigger: AAGCAACCAGCTGCCAGCTCCAAAGCCAGCTCTGGCGATGCCTCATCCCTCAGCATTGAGGAGACCAATAAACTCCGAGCAAAGTTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000235654.2
CDS-3UTR CAA 90 bp ACACAGGCATGGCCTGAAGGGATGAGGACCCCAGAGCAAGGGCTAAGGCACAGCTCTTTCTTAACAGCATaGACCTCCAAGGGCTTCAGC +
Preference number: 5 (lower is better)
Translates to: TQAWPEGMRTPEQGLRHSSFLTA*TSKGFS
Trigger: GCTGAAGCCCTTGGAGGTCAATGCTGTTAAGAAAGA...GCTGTGCCTTAGCCCTTGCTCTGGGGTCCTCATCCCTTCAGGCCATGCCTGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CAGGGCTTCTTCCACAGCGCCTTCCTAGAAAGCCCATCTTTCCAGGCACAGTTGAGCAAGCGTTTTTCCTaGGCAGCTGCCAGCTTCTCC +
Preference number: 5 (lower is better)
Translates to: QGFFHSAFLESPSFQAQLSKRFS*AAASFS
Trigger: GGAGAAGCTGGCAGCTGCCAAGGAAAAACGCTTGCT...CAACTGTGCCTGGAAAGATGGGCTTTCTAGGAAGGCGCTGTGGAAGAAGCCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CTCATAACCATCTGTCACTTTAGTTCCAGGGCATCTGCCACCCTCTTCTGGCTCTTCCACAGTGAGGCCTaGCAGGTCCCGGGCACTGTA +
Preference number: 5 (lower is better)
Translates to: LITICHFSSRASATLFWLFHSEA*QVPGTV
Trigger: TACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAA...GAGCCAGAAGAGGGTGGCAGATGCCCTGGAACTAAAGTGACAGATGGTTATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp CCATCTTATCCTCGATGCAGTACACTGCTGAGGGCAGTGACTTATTaGGAGCCTTCACCCGGGCCACCTTTTGTACTGTGGTCTCCAGCA +
Preference number: 5 (lower is better)
Translates to: PSYPRCSTLLRAVTY*EPSPGPPFVLWSPA
Trigger: TGCTGGAGACCACAGTACAAAAGGTGGCCCGGGTGAAGGCTCCCAATAAGTCACTGCCCTCAGCAGTGTACTGCATCGAGGATAAGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp CCCCTAGGCCCTGCTCTCCCTAAGGTGTGGCAGCAACAGCACCAACCCAATTTCAATTCAGAAGTGGCATaGAACACGATGGTCCCCTTC +
Preference number: 5 (lower is better)
Translates to: PLGPALPKVWQQQHQPNFNSEVA*NTMVPF
Trigger: GAAGGGGACCATCGTGTTCAATGCCACTTCTGAATT...GAAATTGGGTTGGTGCTGTTGCTGCCACACCTTAGGGAGAGCAGGGCCTAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 90 bp CTCTGCTCAAACTCCTCCTCCACTAAAGTGCTCACACCAAACTCTTaGTCCATCTCCTCTAGTAGCTTAGCCCGCTTCTCTGCCAGGTCC +
Preference number: 5 (lower is better)
Translates to: LCSNSSSTKVLTPNS*SISSSSLARFSARS
Trigger: GGACCTGGCAGAGAAGCGGGCTAAGCTACTAGAGGAGATGGACCAAGAGTTTGGTGTGAGCACTTTAGTGGAGGAGGAGTTTGAGCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS-3UTR CAA 90 bp GCAGCAACAGCACCAACCCAATTTCCTGAAAATAAGTGTGAGCTTTTAGTTAGGGCCACGGGCTCCTCCTaGGTGCCCGCCTCTTTCTTA +
Preference number: 5 (lower is better)
Translates to: AATAPTQFPENKCELLVRATGSS*VPASFL
Trigger: TAAGAAAGAGGCGGGCACCAAGGAGGAGCCCGTGGC...CCTAACTAAAAGCTCACACTTATTTTCAGGAAATTGGGTTGGTGCTGTTGCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp GCTCCGCTTGGCTTCGTTCGCGACCGTGCGCGCCGCTaGGGGCCTCGGCTTCCGCCCCACGCCGCCCGCTCC +
Preference number: 6 (lower is better)
Translates to: APLGFVRDRARR*GPRLPPHAARS
Trigger: GGAGCGGGCGGCGTGGGGCGGAAGCCGAGGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp TCTTATGCTCGCGATGCCGTGGCGGCTGCTCGGTCGTaGCCCCAGTCCCGGCCGCAGCCGTCGTCCCGGCCG +
Preference number: 6 (lower is better)
Translates to: SYARDAVAAARS*PQSRPQPSSRP
Trigger: CGGCCGGGACGACGGCTGCGGCCGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp TTCTCCCGCTTCACGCGCCGCTCCGAGGGCTCCGCTTaGCTTCGTTCGCGACCGTGCGCGCCGCTGCGGGCC +
Preference number: 6 (lower is better)
Translates to: FSRFTRRSEGSA*LRSRPCAPLRA
Trigger: GGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGCGGCGCGTGAAGCGGGAGAA
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TTTCTCCCGCTTCACGCGCCGCTCCGAGGGCTCCGCTaGGCTTCGTTCGCGACCGTGCGCGCCGCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: FLPLHAPLRGLR*ASFATVRAAAG
Trigger: GCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGCGGCGCGTGAAGCGGGAGAAA
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp GTCATCGCGTTTCTCCCGCTTCACGCGCCGCTCCGAGGGCTCCGCTaGGCTTCGTTCGCGACCGTGCGCGCCGCTGCGGGCCTCGGCTTC +
Preference number: 6 (lower is better)
Translates to: VIAFLPLHAPLRGLR*ASFATVRAAAGLGF
Trigger: GAAGCCGAGGCCCGCAGCGGCGCGCACGGTCGCGAACGAAGCCAAGCGGAGCCCTCGGAGCGGCGCGTGAAGCGGGAGAAACGCGATGAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp GCTCCGGTGCTTGTGTTTCTTATGCTCGCGATGCCGTaGCGGCTGCTCGGTCGTGCCCCCAGTCCCGGCCGC +
Preference number: 6 (lower is better)
Translates to: APVLVFLMLAMP*RLLGRAPSPGR
Trigger: GCGGCCGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGAAACACAAGCACCGGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CCGCTGCTCCGGTGCTTGTGTTTCTTATGCTCGCGATaGCGTGGCGGCTGCTCGGTCGTGCCCCCAGTCCCG +
Preference number: 6 (lower is better)
Translates to: PLLRCLCFLCSR*RGGCSVVPPVP
Trigger: CGGGACTGGGGGCACGACCGAGCAGCCGCCACGGCATCGCGAGCATAAGAAACACAAGCACCGGAGCAGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp ACCTTCTCACCACTGTCTCGGAGCTGCTGCAGTTGCTaGAGCTGCCGCAGCCGGCGCCCCTTCTCCAGCTGC +
Preference number: 6 (lower is better)
Translates to: TFSPLSRSCCSC*SCRSRRPFSSC
Trigger: GCAGCTGGAGAAGGGGCGCCGGCTGCGGCAGCTGCAGCAACTGCAGCAGCTCCGAGACAGTGGTGAGAAGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp GCCAGCTTCTCCCGCAGTTCTTCCCGCTGTCGCAAGGCCATGGGGTaGATAACATCGGCTGCCACGGGCTCCTCCTTGGTGCCCGCCTCT +
Preference number: 6 (lower is better)
Translates to: ASFSRSSSRCRKAMG*ITSAATGSSLVPAS
Trigger: AGAGGCGGGCACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCGACAGCGGGAAGAACTGCGGGAGAAGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS GCA 72 bp AACTCTCGTTCCCTCAGGCCATCGGCCATCCCACCCTaGTCCAGACGGAAGGAATGTGGTCGCTCGCCCTCC +
Preference number: 6 (lower is better)
Translates to: NSRSLRPSAIPP*SRRKECGRSPS
Trigger: GGAGGGCGAGCGACCACATTCCTTCCGTCTGGAGCAGGGTGGGATGGCCGATGGCCTGAGGGAACGAGAGTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp CTTCCTGCTCCTCGCGGTTGCCAGCCAACCCGTAGGTaGGGATCTCCCCCAGCGTGCGGCAGAATTCAGAAG +
Preference number: 6 (lower is better)
Translates to: LPAPRGCQPTRR*GSPPACGRIQK
Trigger: CTTCTGAATTCTGCCGCACGCTGGGGGAGATCCCCACCTACGGGTTGGCTGGCAACCGCGAGGAGCAGGAAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CCGCTGTCGCAAGGCCATGGGGTTGATAACATCGGCTaGCACGGGCTCCTCCTTGGTGCCCGCCTCTTTCTT +
Preference number: 6 (lower is better)
Translates to: PLSQGHGVDNIG*HGLLLGARLFL
Trigger: AAGAAAGAGGCGGGCACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCGACAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS GCA 72 bp TTGCCTGAGCCCTTTCCGTGGAAGCGGTGGGACAGCTaGCGGAATGCCTCCTTGGGAGTCAGTTTCCTGCCC +
Preference number: 6 (lower is better)
Translates to: LPEPFPWKRWDS*RNASLGVSFLP
Trigger: GGGCAGGAAACTGACTCCCAAGGAGGCATTCCGGCAGCTGTCCCACCGCTTCCACGGAAAGGGCTCAGGCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CCACTGAGCACGATATACGGTGTCTTCTGGGCCTTCTaGTTCTCCTGGAGCAGTGCCACGGTGCCCAGGGGC +
Preference number: 6 (lower is better)
Translates to: PLSTIYGVFWAF*FSWSSATVPRG
Trigger: GCCCCTGGGCACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTGCTCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp CCTGGAGCAGTGCCACGGTGCCCAGGGGCGTGTCACTaGAGCTCATTTTCTTCAGGAGCGCCTCCTCATCCA +
Preference number: 6 (lower is better)
Translates to: PGAVPRCPGACH*SSFSSGAPPHP
Trigger: TGGATGAGGAGGCGCTCCTGAAGAAAATGAGCTCCAGTGACACGCCCCTGGGCACCGTGGCACTGCTCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TCCCGCAGTTCTTCCCGCTGTCGCAAGGCCATGGGGTaGATAACATCGGCTGCCACGGGCTCCTCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: SRSSSRCRKAMG*ITSAATGSSLV
Trigger: CACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCGACAGCGGGAAGAACTGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS CAA 90 bp AGCGCCTCCTCATCCAGCTTCTTCATCCGCCGCTCAGTCTTCATCTaGCCTGAGCCCTTTCCGTGGAAGCGGTGGGACAGCTGCCGGAAT +
Preference number: 6 (lower is better)
Translates to: SASSSSFFIRRSVFI*PEPFPWKRWDSCRN
Trigger: ATTCCGGCAGCTGTCCCACCGCTTCCACGGAAAGGGCTCAGGCAAGATGAAGACTGAGCGGCGGATGAAGAAGCTGGATGAGGAGGCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp GTCTTCATCTTGCCTGAGCCCTTTCCGTGGAAGCGGTaGGACAGCTGCCGGAATGCCTCCTTGGGAGTCAGT +
Preference number: 6 (lower is better)
Translates to: VFILPEPFPWKR*DSCRNASLGVS
Trigger: ACTGACTCCCAAGGAGGCATTCCGGCAGCTGTCCCACCGCTTCCACGGAAAGGGCTCAGGCAAGATGAAGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp CGCAAGGCCATGGGGTTGATAACATCGGCTGCCACGGGCTCCTCCTaGGTGCCCGCCTCTTTCTTAACAGCATTGACCTCCAAGGGCTTC +
Preference number: 6 (lower is better)
Translates to: RKAMGLITSAATGSS*VPASFLTALTSKGF
Trigger: GAAGCCCTTGGAGGTCAATGCTGTTAAGAAAGAGGCGGGCACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCATGGCCTTGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS CAA 90 bp TCAGGCTTCTTTTTCCGAAGCTCCACGTTCTTGTCCGCCCGCTCCTaGTCCACCATGTTCACATTCACCAGCACGTCCTCCCCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: SGFFFRSSTFLSARS*STMFTFTSTSSPSC
Trigger: GCAGGACGGGGAGGACGTGCTGGTGAATGTGAACATGGTGGACAAGGAGCGGGCGGACAAGAACGTGGAGCTTCGGAAAAAGAAGCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp GATGAGGCATCGCCAGAGCTGGCTTTGGAGCTGGCAGCTGGTTGCTaGGACCTCCCTCCCGATCTCTTGATCTCTGGTCCTACGTTTGAC +
Preference number: 6 (lower is better)
Translates to: DEASPELALELAAGC*DLPPDLLISGPTFD
Trigger: GTCAAACGTAGGACCAGAGATCAAGAGATCGGGAGGGAGGTCCAAGCAACCAGCTGCCAGCTCCAAAGCCAGCTCTGGCGATGCCTCATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235654.2
CDS GCA 72 bp GCCCGCTTCTCTGCCAGGTCCTTCTCTTTCTGTAGCTaGCGGCTCCTCTCTATCCAGGCTGCAGTATCATCC +
Preference number: 6 (lower is better)
Translates to: ARFSARSFSFCS*RLLSIQAAVSS
Trigger: GGATGATACTGCAGCCTGGATAGAGAGGAGCCGGCAGCTACAGAAAGAGAAGGACCTGGCAGAGAAGCGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CGAAAAGAATCGATGGCATGTTCCACAGTGAGGCCTTaGAGGTCCCGGGCACTGTACAGGTCCTGTCGCCTC +
Preference number: 6 (lower is better)
Translates to: RKESMACSTVRP*RSRALYRSCRL
Trigger: GAGGCGACAGGACCTGTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCATCGATTCTTTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp GATGTCCATGTTCTCTACTCGAGTGTCATCCGATGGTaGCGGCTGGGCCACAGGGTCCTTCTCCTCATCCTC +
Preference number: 6 (lower is better)
Translates to: DVHVLYSSVIRW*RLGHRVLLLIL
Trigger: GAGGATGAGGAGAAGGACCCTGTGGCCCAGCCGCCACCATCGGATGACACTCGAGTAGAGAACATGGACATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp TTGCCACTGCCACTGAGCACGATATACGGTGTCTTCTaGGCCTTCTGCTTCTCCTGGAGCAGTGCCACGGTG +
Preference number: 6 (lower is better)
Translates to: LPLPLSTIYGVF*AFCFSWSSATV
Trigger: CACCGTGGCACTGCTCCAGGAGAAGCAGAAGGCCCAGAAGACACCGTATATCGTGCTCAGTGGCAGTGGCAA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp ATCTCCCCCAGCGTGCGGCAGAATTCAGAAGTGGCATaGAACACGATGGTCCCCTTCCTCTCAGGGTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISPSVRQNSEVA*NTMVPFLSGSS
Trigger: GGAGGACCCTGAGAGGAAGGGGACCATCGTGTTCAATGCCACTTCTGAATTCTGCCGCACGCTGGGGGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp CTCCCCTTCTCGAAAAGAATCGATGGCATGTTCCACAGTGAGGCCTaGCAGGTCCCGGGCACTGTACAGGTCCTGTCGCCTCTGCTCAAA +
Preference number: 6 (lower is better)
Translates to: LPFSKRIDGMFHSEA*QVPGTVQVLSPLLK
Trigger: TTTGAGCAGAGGCGACAGGACCTGTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCATCGATTCTTTTCGAGAAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 72 bp CCCCTTCTCGAAAAGAATCGATGGCATGTTCCACAGTaGGGCCTTGCAGGTCCCGGGCACTGTACAGGTCCT +
Preference number: 6 (lower is better)
Translates to: PLLEKNRWHVPQ*GLAGPGHCTGP
Trigger: AGGACCTGTACAGTGCCCGGGACCTGCAAGGCCTCACTGTGGAACATGCCATCGATTCTTTTCGAGAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp ACCATGTTCACATTCACCAGCACGTCCTCCCCGTCCTaGAGTACCCCTTTGTCCTTGAGGGTGAGGACCACA +
Preference number: 6 (lower is better)
Translates to: TMFTFTSTSSPS*STPLSLRVRTT
Trigger: TGTGGTCCTCACCCTCAAGGACAAAGGGGTACTGCAGGACGGGGAGGACGTGCTGGTGAATGTGAACATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CGGAGCTCAGAGACTGAGCCTGCAGCCGTAGCTTGGTaGGGATTTCTTCTAACTCTCGTTCCCTCAGGCCAT +
Preference number: 6 (lower is better)
Translates to: RSSETEPAAVAW*GFLLTLVPSGH
Trigger: ATGGCCTGAGGGAACGAGAGTTAGAAGAAATCCGCACCAAGCTACGGCTGCAGGCTCAGTCTCTGAGCTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp ATGGGGTTGATAACATCGGCTGCCACGGGCTCCTCCTaGGTGCCCGCCTCTTTCTTAACAGCATTGACCTCC +
Preference number: 6 (lower is better)
Translates to: MGLITSAATGSS*VPASFLTALTS
Trigger: GGAGGTCAATGCTGTTAAGAAAGAGGCGGGCACCAAGGAGGAGCCCGTGGCAGCCGATGTTATCAACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS CAA 90 bp GCCATCTTATCCTCGATGCAGTACACTGCTGAGGGCAGTGACTTATaGGGAGCCTTCACCCGGGCCACCTTTTGTACTGTGGTCTCCAGC +
Preference number: 6 (lower is better)
Translates to: AILSSMQYTAEGSDL*GAFTRATFCTVVSS
Trigger: GCTGGAGACCACAGTACAAAAGGTGGCCCGGGTGAAGGCTCCCAATAAGTCACTGCCCTCAGCAGTGTACTGCATCGAGGATAAGATGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 72 bp TGGCAGCTGGTTGCTTGGACCTCCCTCCCGATCTCTTaGTCTCTGGTCCTACGTTTGACAAGCTCTCAACCC +
Preference number: 6 (lower is better)
Translates to: WQLVAWTSLPIS*SLVLRLTSSQP
Trigger: GGGTTGAGAGCTTGTCAAACGTAGGACCAGAGATCAAGAGATCGGGAGGGAGGTCCAAGCAACCAGCTGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000235654.2
CDS GCA 72 bp ATCCTGAGTCTGGTCGCCCAGGGGCAGCAAGTCATCTaGCCGCATTATCACCTCCTTCTCCTTCTTTCGGAT +
Preference number: 6 (lower is better)
Translates to: ILSLVAQGQQVI*PHYHLLLLLSD
Trigger: ATCCGAAAGAAGGAGAAGGAGGTGATAATGCGGGCAGATGACTTGCTGCCCCTGGGCGACCAGACTCAGGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TTTTTCCGAAGCTCCACGTTCTTGTCCGCCCGCTCCTaGTCCACCATGTTCACATTCACCAGCACGTCCTCC +
Preference number: 6 (lower is better)
Translates to: FFRSSTFLSARS*STMFTFTSTSS
Trigger: GGAGGACGTGCTGGTGAATGTGAACATGGTGGACAAGGAGCGGGCGGACAAGAACGTGGAGCTTCGGAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS TCA 72 bp ACCCTGGCGGAAGAGCTCCCCCATCCTCTTCATCACTaGTGTCCATGTTCTCTACTCGAGTGTCATCCGATG +
Preference number: 6 (lower is better)
Translates to: TLAEELPHPLHH*CPCSLLECHPM
Trigger: CATCGGATGACACTCGAGTAGAGAACATGGACATCAGTGATGAAGAGGATGGGGGAGCTCTTCCGCCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CCA 72 bp TATTGGGAGCCTTCACCCGGGCCACCTTTTGTACTGTaGTCTCCAGCAGTCCTTTGTTCTGACACAGGAGCA +
Preference number: 6 (lower is better)
Translates to: YWEPSPGPPFVL*SPAVLCSDTGA
Trigger: TGCTCCTGTGTCAGAACAAAGGACTGCTGGAGACCACAGTACAAAAGGTGGCCCGGGTGAAGGCTCCCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TGGGTGAAGCCCCTGTACTCCTCCCGTCGGCTGTACTaGTCATCAATGGCCATCTTATCCTCGATGCAGTAC +
Preference number: 6 (lower is better)
Translates to: WVKPLYSSRRLY*SSMAILSSMQY
Trigger: GTACTGCATCGAGGATAAGATGGCCATTGATGACAAGTACAGCCGACGGGAGGAGTACAGGGGCTTCACCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp CAATTTTTGGTTCAGCAAGCGTTTTTCCTTGGCAGCTaGCAGCTTCTCCCGCAGTTCTTCCCGCTGTCGCAA +
Preference number: 6 (lower is better)
Translates to: QFLVQQAFFLGS*QLLPQFFPLSQ
Trigger: TTGCGACAGCGGGAAGAACTGCGGGAGAAGCTGGCAGCTGCCAAGGAAAAACGCTTGCTGAACCAAAAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS CAA 90 bp GCCCTCCAGTTCCTCATCATATTTGGCCAGGATAGAACGAGGTTTTaGCTGTGCCAAATCGTCCACACTCTCATCTTCCGCATAGGGCAG +
Preference number: 6 (lower is better)
Translates to: ALQFLIIFGQDRTRF*LCQIVHTLIFRIGQ
Trigger: CTGCCCTATGCGGAAGATGAGAGTGTGGACGATTTGGCACAGCAAAAACCTCGTTCTATCCTGGCCAAATATGATGAGGAACTGGAGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp AGACGGAAGGAATGTGGTCGCTCGCCCTCCAGTTCCTCATCATATTaGGCCAGGATAGAACGAGGTTTTTGCTGTGCCAAATCGTCCACA +
Preference number: 6 (lower is better)
Translates to: RRKECGRSPSSSSSY*ARIERGFCCAKSST
Trigger: TGTGGACGATTTGGCACAGCAAAAACCTCGTTCTATCCTGGCCAAATATGATGAGGAACTGGAGGGCGAGCGACCACATTCCTTCCGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS GCA 72 bp AACAGCATTGACCTCCAAGGGCTTCAGCCCCAACTTTaGTCGGAGTTTATTGGTCTCCTCAATGCTGAGGGA +
Preference number: 6 (lower is better)
Translates to: NSIDLQGLQPQL*SEFIGLLNAEG
Trigger: TCCCTCAGCATTGAGGAGACCAATAAACTCCGAGCAAAGTTGGGGCTGAAGCCCTTGGAGGTCAATGCTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000044207.5
ENSMUST00000235654.2
CDS GCA 72 bp GGCTGTACTTGTCATCAATGGCCATCTTATCCTCGATaGAGTACACTGCTGAGGGCAGTGACTTATTGGGAG +
Preference number: 6 (lower is better)
Translates to: GCTCHQWPSYPR*STLLRAVTYWE
Trigger: CTCCCAATAAGTCACTGCCCTCAGCAGTGTACTGCATCGAGGATAAGATGGCCATTGATGACAAGTACAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp GAATGTGGTCGCTCGCCCTCCAGTTCCTCATCATATTaGGCCAGGATAGAACGAGGTTTTTGCTGTGCCAAA +
Preference number: 6 (lower is better)
Translates to: ECGRSPSSSSSY*ARIERGFCCAK
Trigger: TTTGGCACAGCAAAAACCTCGTTCTATCCTGGCCAAATATGATGAGGAACTGGAGGGCGAGCGACCACATTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TCCTTCTCCTTCTTTCGGATTTTCTTCACTCTCCGTTaGGTCTTCTTGAAGGTCACCATCTCCTCGGGACTG +
Preference number: 6 (lower is better)
Translates to: SFSFFRIFFTLR*VFLKVTISSGL
Trigger: CAGTCCCGAGGAGATGGTGACCTTCAAGAAGACCAAACGGAGAGTGAAGAAAATCCGAAAGAAGGAGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 90 bp ATTATCACCTCCTTCTCCTTCTTTCGGATTTTCTTCACTCTCCGTTaGGTCTTCTTGAAGGTCACCATCTCCTCGGGACTGAGGTACTCA +
Preference number: 6 (lower is better)
Translates to: IITSFSFFRIFFTLR*VFLKVTISSGLRYS
Trigger: TGAGTACCTCAGTCCCGAGGAGATGGTGACCTTCAAGAAGACCAAACGGAGAGTGAAGAAAATCCGAAAGAAGGAGAAGGAGGTGATAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5
CDS CAA 72 bp TTCTTTCGGATTTTCTTCACTCTCCGTTTGGTCTTCTaGAAGGTCACCATCTCCTCGGGACTGAGGTACTCA +
Preference number: 6 (lower is better)
Translates to: FFRIFFTLRLVF*KVTISSGLRYS
Trigger: TGAGTACCTCAGTCCCGAGGAGATGGTGACCTTCAAGAAGACCAAACGGAGAGTGAAGAAAATCCGAAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000044207.5