Pregenerated sensors for SARS2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000070699Ensembl transcript IDs: ENSMUST00000094632.6, ENSMUST00000207877.2
Found 143 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTaGTTGGGCAGCCTCAGTGCCTGCTGGTACAGCTGCTCCTCTAGC | + |
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Preference number: 1 (lower is better) Translates to: TLAWLSSPTGVSGWV*LGSLSACWYSCSSS Trigger: GCTAGAGGAGCAGCTGTACCAGCAGGCACTGAGGCTGCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR TCA 90 bp | GGTGTGAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTaGTATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTGCC | + |
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Preference number: 1 (lower is better) Translates to: GVSCFRISRPRARRP*YWGSFCTWSLSWFA Trigger: GGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTCACACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CCA 90 bp | AGCCTCAGTGCCTGCTGGTACAGCTGCTCCTCTAGCTGGGTCTCTTaGGGGTACAAGGGTGTGAGCTGCTTCCGGATCTCCCGGCCTCGG | + |
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Preference number: 1 (lower is better) Translates to: SLSACWYSCSSSWVS*GYKGVSCFRISRPR Trigger: CCGAGGCCGGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCCAAGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGCACTGAGGCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CCA 90 bp | TGTGACTTACCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTaGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTGGTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: CDLPGFSPTTRTTLA*LSSPTGVSGWVWLG Trigger: GCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGGTAAGTCACA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR TCA 90 bp | AGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTaGGCCGTGCCTCTGGCTGACAGCCTCAATGGTAGAGGGATCACT | + |
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Preference number: 1 (lower is better) Translates to: RWEEEAGTAFFRPTG*AVPLADSLNGRGIT Trigger: AGTGATCCCTCTACCATTGAGGCTGTCAGCCAGAGGCACGGCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR TCA 90 bp | GACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTaGGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAG | + |
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Preference number: 1 (lower is better) Translates to: DSVLTTIYCGHSAPH*GGKKKLGRPSSGPQ Trigger: CTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR GCA 90 bp | GCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTaGCATCCTGCTGATGACTGTCATGGGTGTCTGAGCTCTGGCAAC | + |
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Preference number: 1 (lower is better) Translates to: ALILGVLLHLVTVLV*HPADDCHGCLSSGN Trigger: GTTGCCAGAGCTCAGACACCCATGACAGTCATCAGCAGGATGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR GCA 90 bp | GGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTaGTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: GSRRLCSHDHLLWPF*SALRWEEEAGTAFF Trigger: GAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR-3UTR TCA 90 bp | CACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTGGGGGTACAAGGGTGTaGGCTGCTTCCGGATCTCCC | + |
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Preference number: 2 (lower is better) Translates to: HTDHSSLALVPHRRVWVGGGTRV*AASGSP Trigger: GGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCC...ACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR-3UTR GCA 90 bp | CACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGTTGGGCAGCCTCAGTaGCTGCTGGTACAGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: HHTDHSSLALVPHRRVWVVGQPQ*LLVQLL Trigger: GAGCAGCTGTACCAGCAGGCACTGAGGCTGCCCAAC...CACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR-3UTR TCA 90 bp | TTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTaGGCCGTGCCTCTGGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: LWPFCSALRWEEEAGTAFFRPTG*AVPLAD Trigger: GTCAGCCAGAGGCACGGCTCAGCCTGTGGGCCGGAA...GAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR CAA 90 bp | GAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTGATATaGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTGCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: ELLPDLPASGPQALI*GVLLHLVTVLVCHP Trigger: AGGATGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR-3UTR TCA 90 bp | CACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGACTGTCATGGGTGTCTaGGCTCTGGCAACAAGAGGG | + |
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Preference number: 2 (lower is better) Translates to: HHTDHSSLALVPHRRVWVTVMGV*ALATRG Trigger: CCCTCTTGTTGCCAGAGCTCAGACACCCATGACAGT...CACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR-3UTR GCA 90 bp | GACTTACCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTGGCTCTCGTCCGCCTGCTGGTACAGCTaGTCCTCTAGCTGGGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: DLPGFSPTTRTTLAWLSSACWYS*SSSWVS Trigger: AGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGC...GGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGGTAAGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR-3UTR GCA 90 bp | GTCTGGTTGGGCAGCCTCAGTGCCTGCTGGTACAGCTGCTCCTCTAGCTGGGTCTATTGGGGGTCCTTCTaGACTTGGTCACTGTCTTGG | + |
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Preference number: 2 (lower is better) Translates to: VWLGSLSACWYSCSSSWVYWGSF*TWSLSW Trigger: CCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATA...GACCCAGCTAGAGGAGCAGCTGTACCAGCAGGCACTGAGGCTGCCCAACCAGAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR GCA 72 bp | TCTAGCTGGGTCTCTTGGGGGTACAAGGGTGTGAGCTaGTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SSWVSWGYKGVS*FRISRPRARRP Trigger: GGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCCAAGAGACCCAGCTAGA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CCA 72 bp | CTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTaGGTCTGGTTGGGCAGCCTCAGTGCCTGCTGGTAC | + |
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Preference number: 3 (lower is better) Translates to: LAWLSSPTGVSG*VWLGSLSACWY Trigger: GTACCAGCAGGCACTGAGGCTGCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR TCA 72 bp | TGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTaGTATTGGGGGTCCTTCTGCACTTGGTCACTGTCT | + |
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Preference number: 3 (lower is better) Translates to: CFRISRPRARRP*YWGSFCTWSLS Trigger: AGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR TCA 72 bp | GAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTaGGCCGTGCCTCTGGCTGACAGCCTCAATGGTAGA | + |
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Preference number: 3 (lower is better) Translates to: EEAGTAFFRPTG*AVPLADSLNGR Trigger: TCTACCATTGAGGCTGTCAGCCAGAGGCACGGCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR GCA 72 bp | GTCTGGTTGGGCAGCCTCAGTGCCTGCTGGTACAGCTaGTCCTCTAGCTGGGTCTCTTGGGGGTACAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: VWLGSLSACWYS*SSSWVSWGYKG Trigger: ACCCTTGTACCCCCAAGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGCACTGAGGCTGCCCAACCAGAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CCA 72 bp | GCCTGCTGGTACAGCTGCTCCTCTAGCTGGGTCTCTTaGGGGTACAAGGGTGTGAGCTGCTTCCGGATCTCC | + |
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Preference number: 3 (lower is better) Translates to: ACWYSCSSSWVS*GYKGVSCFRIS Trigger: GGAGATCCGGAAGCAGCTCACACCCTTGTACCCCCAAGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CCA 72 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTaGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCC | + |
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Preference number: 3 (lower is better) Translates to: DHLLWPFCSALR*EEEAGTAFFRP Trigger: GGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR TCA 72 bp | CTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTaGGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCC | + |
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Preference number: 3 (lower is better) Translates to: LTTIYCGHSAPH*GGKKKLGRPSS Trigger: GGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR GCA 72 bp | TTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTaGCATCCTGCTGATGACTGTCATGGGTGTCTGAGC | + |
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Preference number: 3 (lower is better) Translates to: LGVLLHLVTVLV*HPADDCHGCLS Trigger: GCTCAGACACCCATGACAGTCATCAGCAGGATGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR GCA 72 bp | AGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTaGTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACG | + |
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Preference number: 3 (lower is better) Translates to: RLCSHDHLLWPF*SALRWEEEAGT Trigger: CGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| 3UTR CCA 72 bp | GCCTCAATGGTAGAGGGATCACTGACAATAATTCACTaGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: ASMVEGSLTIIH*QGRDSRLRSPG Trigger: TCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCAGTGAATTATTGTCAGTGATCCCTCTACCATTGAGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | ACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGTCCTTGGGTTCTGGCTaGACACGCAGCGTCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: TTRTTLAWLSSPTGVSGWSLGSG*TRSVLG Trigger: CCCGAGGACGCTGCGTGTGCAGCCAGAACCCAAGGA...CCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | GAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTGATATTGGGGGTCTCCAGGCTCCGGATCTaGTCTCGAAGCTGCCTCAAC | + |
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Preference number: 4 (lower is better) Translates to: ELLPDLPASGPQALILGVSRLRI*SRSCLN Trigger: GTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCTGGA...GACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | CCCGCAGGCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTGGCCGCAGCTCCCCCTTaGGGAGCTCCAGGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: PAGPDIGGPSALGHCLGLAAAPP*GAPGSA Trigger: CGCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGC...CAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | ACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGAGCCAGCAGGGCCCGCACTaGCTCTGCCACAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: TEVGRRSWDGLLPAHRLSQQGPH*LCHSLL Trigger: AAGGAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTG...GCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | TCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTGGTTGGGCAGCTCCTCCTTGGGTTCTaGCTGCACACGCAGCGTCCT | + |
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Preference number: 4 (lower is better) Translates to: SSLALVPHRRVWVGLVGQLLLGF*LHTQRP Trigger: AGGACGCTGCGTGTGCAGCCAGAACCCAAGGAGGAG...CTGCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR CCA 90 bp | CACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGTGCTGGCAGCCATCTTaGGACTGGGATGGGGTCCGA | + |
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Preference number: 4 (lower is better) Translates to: HHTDHSSLALVPHRRVWVCWQPS*DWDGVR Trigger: TCGGACCCCATCCCAGTCCCAAGATGGCTGCCAGCA...CACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| 3UTR CAA 72 bp | CCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTGATATaGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTT | + |
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Preference number: 4 (lower is better) Translates to: PDLPASGPQALI*GVLLHLVTVLV Trigger: AACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | CCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACACACAGCCTCCTTCTCTaGCTCCAGGCTCCGGATCTG | + |
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Preference number: 4 (lower is better) Translates to: PGFSPTTRTTLAWLSSPTHSLLL*LQAPDL Trigger: CAGATCCGGAGCCTGGAGGCAGAGAAGGAGGCTGTG...TGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | GACTTACCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTGGCTCTCGTCCCAGCAGGGCCCGCACTaGCTCTGCCACAGCCTCCTT | + |
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Preference number: 4 (lower is better) Translates to: DLPGFSPTTRTTLAWLSSQQGPH*LCHSLL Trigger: AAGGAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTG...GGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGGTAAGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR GCA 90 bp | TTGGGGGTACAAGGGTGTGAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGACCTTGTCTCTGACCTaGTGGCAGCCATCTTGGGAC | + |
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Preference number: 4 (lower is better) Translates to: LGVQGCELLPDLPASGPQTLSLT*WQPSWD Trigger: GTCCCAAGATGGCTGCCAGCAGGTCAGAGACAAGGT...CTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR CCA 90 bp | TTGGGGGTACAAGGGTGTGAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGTTGTCTCTGACCTGCTaGCAGCCATCTTGGGACTGG | + |
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Preference number: 4 (lower is better) Translates to: LGVQGCELLPDLPASGPQLSLTC*QPSWDW Trigger: CCAGTCCCAAGATGGCTGCCAGCAGGTCAGAGACAA...CTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCCAA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR CCA 90 bp | TCTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTGGTTGGGCAGCAGCCATCTTGGGACTaGGATGGGGTCCGATCTATG | + |
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Preference number: 4 (lower is better) Translates to: SSLALVPHRRVWVGLVGQQPSWD*DGVRSM Trigger: CATAGATCGGACCCCATCCCAGTCCCAAGATGGCTG...CTGCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR TCA 90 bp | CGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGGGCGGGCACGAGGACTaGACCATCCTTTTGCTGATT | + |
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Preference number: 4 (lower is better) Translates to: RTEVGRRSWDGLLPAHRLGGHED*TILLLI Trigger: AATCAGCAAAAGGATGGTTCAGTCCTCGTGCCCGCC...CAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | GTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTTCCTTGGGTTCTGGCTaGACACGCAGCGTCCTCGGG | + |
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Preference number: 4 (lower is better) Translates to: VAILLRTEVGRRSWDGLLSLGSG*TRSVLG Trigger: CCCGAGGACGCTGCGTGTGCAGCCAGAACCCAAGGA...AAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | CTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAGCCGCAGCTCCCCCTTaGGGAGCTCCAGGGAGCGCG | + |
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Preference number: 4 (lower is better) Translates to: LFSRPFIVAILLRTEVGRAAAPP*GAPGSA Trigger: CGCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGC...TCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | GTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCCAGTGTCTGTCTCTaGCCGGTAGCAGGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VAILLRTEVGRRSWDGLLPSVCL*PVAGAG Trigger: GCCAGCACCTGCTACCGGGCAGAGACAGACACTGGG...AAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | ACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGAGCTCCAGTACCCGGAAGTaGAAGCCCAGCTCCGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: TEVGRRSWDGLLPAHRLSSSTRK*KPSSVK Trigger: CTTGACGGAGCTGGGCTTGCACTTCCGGGTACTGGA...GCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | GAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTGATATTGGGGGTCAGGGAATGGTCTCCTTaGTCTTGGAAAAGACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: ELLPDLPASGPQALILGVREWSP*SWKRPG Trigger: TCCAGGTCTTTTCCAAGAGCAAGGAGACCATTCCCT...GACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR CCA 90 bp | CCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTGGCTCTCGTCCCCCACAAGCGAAACTCCTCCTTaGGTTCTGGCTGCACACGCA | + |
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Preference number: 4 (lower is better) Translates to: PGFSPTTRTTLAWLSSPTSETPP*VLAAHA Trigger: TGCGTGTGCAGCCAGAACCCAAGGAGGAGTTTCGCT...TGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR CCA 90 bp | ACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGAGCAGGTGGCCTCGGGGTTaGAAGGAGAAAGCCGGCTTT | + |
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Preference number: 4 (lower is better) Translates to: TEVGRRSWDGLLPAHRLSRWPRG*KEKAGF Trigger: AAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCT...GCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | CGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGGCTTCTGAGGCTGATTaGGGCCGATGTACTGGAGAG | + |
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Preference number: 4 (lower is better) Translates to: RTEVGRRSWDGLLPAHRLASEAD*GRCTGE Trigger: CTCTCCAGTACATCGGCCCCAATCAGCCTCAGAAGC...CAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | CTAGCCTGGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTGGTTGGGCAGCTGGTCTCCTTGCTCTTaGAAAAGACCTGGAGGTAGA | + |
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Preference number: 4 (lower is better) Translates to: LAWLSSPTGVSGWVWLGSWSPCS*KRPGGR Trigger: TCTACCTCCAGGTCTTTTCCAAGAGCAAGGAGACCA...GCTGCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS-3UTR TCA 90 bp | TGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGAGGGGAGGTGACACCTACATTTCCAGGAGGGCAATaGGGACTCGGGGAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDSRLRSPGGEVTPTFPGGQ*GLGEQH Trigger: GTGCTGTTCCCCGAGTCCTCATTGCCCTCCTGGAAA...TGTAGGTGTCACCTCCCCTCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR TCA 90 bp | CGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGGAACCATCCTTTTGCTaGTTGCTTTCCAGGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RTEVGRRSWDGLLPAHRLEPSFC*LLSRRA Trigger: TGCCCTCCTGGAAAGCAATCAGCAAAAGGATGGTTC...CAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | TGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGAGGGGAGGTGACACCTACAAAGTTGACCAGGCCGTaGTGTAAGAGGGCTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: WQGRDSRLRSPGGEVTPTKLTRP*CKRAPA Trigger: GGCAGGAGCCCTCTTACAGCACGGCCTGGTCAACTT...TGTAGGTGTCACCTCCCCTCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGCCCCACAGGCGTGTCTaGGTGGGTCTGGTTGGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: DHLLWPFCSALRWEEEAGPHRRV*VGLVGQ Trigger: CTGCCCAACCAGACCCACCCAGACACGCCTGTGGGG...CCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGCGGACCACTCTAGCCTaGCTCTCGTCCCCCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: DHLLWPFCSALRWEEEAGRTTLA*LSSPTG Trigger: GCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCG...CCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | TTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCATCTGCTCTCGAAGCTaGCTCAACTCCTGCCACGTG | + |
|
Preference number: 4 (lower is better) Translates to: LWPFCSALRWEEEAGTAFICSRS*LNSCHV Trigger: CACGTGGCAGGAGTTGAGGCAGCTTCGAGAGCAGAT...GAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CCA 90 bp | ACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGAGCACAGACCATCCTGACTaGAAGGTCCCTGAAAGCTAC | + |
|
Preference number: 4 (lower is better) Translates to: TEVGRRSWDGLLPAHRLSTDHPD*KVPESY Trigger: GTAGCTTTCAGGGACCTTCCAGTCAGGATGGTCTGT...GCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR TCA 90 bp | CATGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCCGGTGGCCAGACACGTaGGACAGGCGCTTCTGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HGSRRLCSHDHLLWPFCSRWPDT*DRRFCR Trigger: CCGGCAGAAGCGCCTGTCTCACGTGTCTGGCCACCG...GGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR GCA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGTTGGGCAGCCTCAGTaGCTGCTGGTACAGCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RPFIVAILLRTEVGRRSWVGQPQ*LLVQLL Trigger: GAGCAGCTGTACCAGCAGGCACTGAGGCTGCCCAAC...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR TCA 90 bp | TGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCGGGGGTACAAGGGTGTaGGCTGCTTCCGGATCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WIQKTLFSRPFIVAILLRGGTRV*AASGSP Trigger: GGGAGATCCGGAAGCAGCTCACACCCTTGTACCCCC...GCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR TCA 90 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGGGCGCTTCTGCCGGATaGTGTCCAGTTTCTCGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: DHLLWPFCSALRWEEEAGGASAG*CPVSRQ Trigger: TTGGCGAGAAACTGGACATCATCCGGCAGAAGCGCC...CCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGTCCAGGCTCCGGATCTaGTCTCGAAGCTGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPFIVAILLRTEVGRRSWSRLRI*SRSCLN Trigger: GTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCTGGA...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR GCA 90 bp | CTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGACACAGCCTCCTTCTCTaGCTCCAGGCTCCGGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: LFSRPFIVAILLRTEVGRHSLLL*LQAPDL Trigger: CAGATCCGGAGCCTGGAGGCAGAGAAGGAGGCTGTG...TCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | CTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAGTCACTGTCTTGGTTTaGCAGCAGGGCCCGCACTGC | + |
|
Preference number: 4 (lower is better) Translates to: LFSRPFIVAILLRTEVGRVTVLV*QQGPHC Trigger: GCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGAC...TCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | TTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTATTGGGGGTCCTTCTaGACTTGGTCACTGTCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWPFCSALRWEEEAGTAFYWGSF*TWSLSW Trigger: CCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATA...GAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGTCCATGAAGTATCCTaGCAGCCCCACCTCTGCCGT | + |
|
Preference number: 4 (lower is better) Translates to: RPFIVAILLRTEVGRRSWVHEVS*QPHLCR Trigger: ACGGCAGAGGTGGGGCTGGCAGGATACTTCATGGAC...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | CTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAGGCATTCACCGTGTGTaGGAACTGCAGCTCCCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LFSRPFIVAILLRTEVGRGIHRV*ELQLPG Trigger: ACCGGGGAGCTGCAGTTCGCACACACGGTGAATGCC...TCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | CTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGACTCCTCCTTGGGTTCTaGCTGCACACGCAGCGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFSRPFIVAILLRTEVGRLLLGF*LHTQRP Trigger: AGGACGCTGCGTGTGCAGCCAGAACCCAAGGAGGAG...TCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CCA 90 bp | TCACTGACAATAATTCACTGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGAGTGTCTGGGTGGGTCTaGTTGGGCAGCCTCAGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTIIHWQGRDSRLRSPGVSGWV*LGSLSA Trigger: GGCACTGAGGCTGCCCAACCAGACCCACCCAGACAC...TCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCAGTGAATTATTGTCAGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | GTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTGGATGGGTTGGCATTTaGTGTCATTCCACAGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: VAILLRTEVGRRSWDGLLGWVGI*CHSTAF Trigger: GAAGGCTGTGGAATGACACCAAATGCCAACCCATCC...AAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGTACAGGCGGCGGCTCTaGAAGTCTGTGCAGTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DHLLWPFCSALRWEEEAGYRRRL*KSVQLE Trigger: CTCCAACTGCACAGACTTCCAGAGCCGCCGCCTGTA...CCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGTCCTCTCAGAAGGTCTaGGACCGTCATGGGGGTGAA | + |
|
Preference number: 4 (lower is better) Translates to: RPFIVAILLRTEVGRRSWSSQKV*DRHGGE Trigger: TTCACCCCCATGACGGTCCCAGACCTTCTGAGAGGA...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | TCACTGACAATAATTCACTGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGAGCCTGCTGGTACAGCTaGTCCTCTAGCTGGGTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SLTIIHWQGRDSRLRSPGACWYS*SSSWVS Trigger: AGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGC...TCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCAGTGAATTATTGTCAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCTACTGGAGAGGCACATaGGTAGGGGCTGTGATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: WIQKTLFSRPFIVAILLRYWRGT*VGAVIR Trigger: CCGGATCACAGCCCCTACCCATGTGCCTCTCCAGTA...GCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | TGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGCTTGGGGCCGATGTACTaGAGAGGCACATGGGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: WIQKTLFSRPFIVAILLRLGPMY*RGTWVG Trigger: CCCTACCCATGTGCCTCTCCAGTACATCGGCCCCAA...GCGGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR GCA 90 bp | GACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGGTCAAGATCTCCACCTaGAGAGACAGGAACTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: DHLLWPFCSALRWEEEAGVKIST*RDRNSS Trigger: GGATGAGTTCCTGTCTCTGCAGGTGGAGATCTTGAC...CCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | TCACTGACAATAATTCACTGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGAAGCGAAACTCCTCCTTaGGTTCTGGCTGCACACGCA | + |
|
Preference number: 4 (lower is better) Translates to: SLTIIHWQGRDSRLRSPGSETPP*VLAAHA Trigger: TGCGTGTGCAGCCAGAACCCAAGGAGGAGTTTCGCT...TCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCAGTGAATTATTGTCAGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | AAAGTCTCTAAGTATCAGGGGTCTCTAGAACGCCAGCCTCTGGAGCAGACAGCTGGGTCCTTCTGCACTTaGTCACTGTCTTGGTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: KVSKYQGSLERQPLEQTAGSFCT*SLSWFA Trigger: GGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCC...AGCTGTCTGCTCCAGAGGCTGGCGTTCTAGAGACCCCTGATACTTAGAGACTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | CATGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCTCGCCAATTTCCAGGTaGCCTCGGGGTTGGAAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HGSRRLCSHDHLLWPFCSSPISR*PRGWKE Trigger: CTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGA...GGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | TCACTGACAATAATTCACTGGCAGGGAAGGGACAGTAGACTCAGGAGTCCAGGACTGAAAGCTACAGAGTaGTCCATGAAGTATCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLTIIHWQGRDSRLRSPGLKATE*SMKYPA Trigger: GGCAGGATACTTCATGGACCACTCTGTAGCTTTCAG...TCCTGGACTCCTGAGTCTACTGTCCCTTCCCTGCCAGTGAATTATTGTCAGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CCA 90 bp | AAAGTCTCTAAGTATCAGGGGTCTCTAGAACGCCAGCCTCTGGAGCAGACAGCTATTGTAAATCTGGGATaGGTTGGCATTTGGTGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: KVSKYQGSLERQPLEQTAIVNLG*VGIWCH Trigger: ATGACACCAAATGCCAACCCATCCCAGATTTACAAT...AGCTGTCTGCTCCAGAGGCTGGCGTTCTAGAGACCCCTGATACTTAGAGACTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS CCA 90 bp | CTTGGGTTCTGGCTGCACACGCAGCGTCCTCGGGACCGGAGCCCCTaGCGAGCCAGGAAAGGCCACCAAAGCCGCGCCATGGACGCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LGFWLHTQRPRDRSP*RARKGHQSRAMDAA Trigger: GGCTGCGTCCATGGCGCGGCTTTGGTGGCCTTTCCTGGCTCGCCAGGGGCTCCGGTCCCGAGGACGCTGCGTGTGCAGCCAGAACCCAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS-3UTR CAA 90 bp | GCAGCCTCAGTGCCTGCTGGTACAGCTGCTCCTCTAGCTGGGTCTCTTGGGGGTGGCCGCAGCTCCCCCTaGCGGAGCTCCAGGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: AASVPAGTAAPLAGSLGGGRSSP*RSSRER Trigger: GCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGCC...ACCCCCAAGAGACCCAGCTAGAGGAGCAGCTGTACCAGCAGGCACTGAGGCTGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS GCA 90 bp | TCTGCCTCCAGGCTCCGGATCTGCTCTCGAAGCTGCCTCAACTCCTaGCACGTGGAGATAATCGCAGGCAGGTCGGCCGGCCGCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SASRLRICSRSCLNS*HVEIIAGRSAGRSS Trigger: GGAGCTGCGGCCGGCCGACCTGCCTGCGATTATCTCCACGTGGCAGGAGTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCTGGAGGCAGA 66% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS CCA 90 bp | CCGCAGCTCCCCCTTGCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTaGGCATGCGCACACCGACTCCATGTCCAAGTAGGGAAGCTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: PQLPLAELQGARGFF*ACAHRLHVQVGKLA Trigger: AGCGAGCTTCCCTACTTGGACATGGAGTCGGTGTGCGCATGCCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS GCA 90 bp | CTCCCCCTTGCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTGGGCATaGGCACACCGACTCCATGTCCAAGTAGGGAAGCTCGCTGTAGCC | + |
|
Preference number: 5 (lower is better) Translates to: LPLAELQGARGFFWA*AHRLHVQVGKLAVA Trigger: GGCTACAGCGAGCTTCCCTACTTGGACATGGAGTCGGTGTGCGCATGCCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGCAAGGGGGAG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS CCA 90 bp | GTACAGGAGGTTCCGGACTCGTTTCTCCGTAGCGAAACTCCTCCTTaGGTTCTGGCTGCACACGCAGCGTCCTCGGGACCGGAGCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQEVPDSFLRSETPP*VLAAHAASSGPEPL Trigger: CAGGGGCTCCGGTCCCGAGGACGCTGCGTGTGCAGCCAGAACCCAAGGAGGAGTTTCGCTACGGAGAAACGAGTCCGGAACCTCCTGTAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS CCA 90 bp | AAGGAGAAAGCCGGCTTTTCACCCACCACACGGACCACTCTAGCCTaGCTCTCGTCCCCCACAGGCGTGTCTGGGTGGGTCTGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: KEKAGFSPTTRTTLA*LSSPTGVSGWVWLG Trigger: GCCCAACCAGACCCACCCAGACACGCCTGTGGGGGACGAGAGCCAGGCTAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGCTTTCTCCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS-3UTR CAA 90 bp | GGGCCCGCAGGCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTCTGCTGGCAGCCATCTaGGGACTGGGATGGGGTCCG | + |
|
Preference number: 5 (lower is better) Translates to: GPAGPDIGGPSALGHCLGLLAAI*GLGWGP Trigger: CGGACCCCATCCCAGTCCCAAGATGGCTGCCAGCAG...ACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
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| CDS GCA 90 bp | ACAGCCTCCTTCTCTGCCTCCAGGCTCCGGATCTGCTCTCGAAGCTaGCTCAACTCCTGCCACGTGGAGATAATCGCAGGCAGGTCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TASFSASRLRICSRS*LNSCHVEIIAGRSA Trigger: GGCCGACCTGCCTGCGATTATCTCCACGTGGCAGGAGTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCTGGAGGCAGAGAAGGAGGCTGT 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
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| CDS GCA 90 bp | GCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTaGCAGCAGGGCCCGCACTGCCTCTGCCACAGCCTCCTTCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALILGVLLHLVTVLV*QQGPHCLCHSLLLC Trigger: GCAGAGAAGGAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS CCA 90 bp | CTGGCACAGACCATCCTGACTGGAAGGTCCCTGAAAGCTACAGAGTaGTCCATGAAGTATCCTGCCAGCCCCACCTCTGCCGTCCCGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LAQTILTGRSLKATE*SMKYPASPTSAVPA Trigger: GGCCGGGACGGCAGAGGTGGGGCTGGCAGGATACTTCATGGACCACTCTGTAGCTTTCAGGGACCTTCCAGTCAGGATGGTCTGTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 90 bp | ATGGACTCGGTACAGTCCCCAAGGCTCCTTCCCAGTGTCTGTCTCTaGCCGGTAGCAGGTGCTGGCACAGACCATCCTGACTGGAAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: MDSVQSPRLLPSVCL*PVAGAGTDHPDWKV Trigger: GACCTTCCAGTCAGGATGGTCTGTGCCAGCACCTGCTACCGGGCAGAGACAGACACTGGGAAGGAGCCTTGGGGACTGTACCGAGTCCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 90 bp | CTCCATAGCGGCCTCGGCCAGGCATCCAGGCCTCAATGTCGAACTTaGGATAAGCAGGAAGGCCCAGTTCCTGGGTGGGCATGTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: LHSGLGQASRPQCRT*DKQEGPVPGWACPV Trigger: TACTGGACATGCCCACCCAGGAACTGGGCCTTCCTGCTTATCGCAAGTTCGACATTGAGGCCTGGATGCCTGGCCGAGGCCGCTATGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CAA 90 bp | CATGGATCCAGAAGACTCTGTTCTCACGACCATTTATTGTGGCCATTCTGCTCCGGCCGCAGCTCCCCCTaGCGGAGCTCCAGGGAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: HGSRRLCSHDHLLWPFCSGRSSP*RSSRER Trigger: GCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGCC...GGAGCAGAATGGCCACAATAAATGGTCGTGAGAACAGAGTCTTCTGGATCCATG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CAA 90 bp | ACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGCCCACAGGCTGAGCTTGCTGAGGGTGAAGTaGACCAGGCCGTGCTGTAAG | + |
|
Preference number: 5 (lower is better) Translates to: TEVGRRSWDGLLPAHRLSLLRVK*TRPCCK Trigger: CTTACAGCACGGCCTGGTCAACTTCACCCTCAGCAA...GCTCAGCCTGTGGGCCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 90 bp | TCACCGTGTGTGCGAACTGCAGCTCCCCGGTCTCTGTCTCAAACATaGTGTACAGGCGGCGGCTCTGGAAGTCTGTGCAGTTGGAGGCAC | + |
|
Preference number: 5 (lower is better) Translates to: SPCVRTAAPRSLSQT*CTGGGSGSLCSWRH Trigger: GTGCCTCCAACTGCACAGACTTCCAGAGCCGCCGCCTGTACATCATGTTTGAGACAGAGACCGGGGAGCTGCAGTTCGCACACACGGTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CAA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGTCTGGGTGGGTCTGGTaGGGCAGCCTCAGTGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: RPFIVAILLRTEVGRRSWSGWVW*GSLSAC Trigger: GCAGGCACTGAGGCTGCCCAACCAGACCCACCCAGA...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 90 bp | CACCGACTCCATGTCCAAGTAGGGAAGCTCGCTGTAGCCCTCTCGTaGGTGTTCGTACAGGAGGTTCCGGACTCGTTTCTCCGTAGCGAA | + |
|
Preference number: 5 (lower is better) Translates to: HRLHVQVGKLAVALS*VFVQEVPDSFLRSE Trigger: TTCGCTACGGAGAAACGAGTCCGGAACCTCCTGTACGAACACGCACGAGAGGGCTACAGCGAGCTTCCCTACTTGGACATGGAGTCGGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS GCA 90 bp | GAAAGCTACAGAGTGGTCCATGAAGTATCCTGCCAGCCCCACCTCTaGCGTCCCGGCCAGGTTAAGGTCTTCGAAGCGAGAGGGGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ESYRVVHEVSCQPHL*RPGQVKVFEARGVN Trigger: ATTGACCCCTCTCGCTTCGAAGACCTTAACCTGGCCGGGACGGCAGAGGTGGGGCTGGCAGGATACTTCATGGACCACTCTGTAGCTTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 90 bp | AGGCGCTTCTGCCGGATGATGTCCAGTTTCTCGCCAATTTCCAGGTaGCCTCGGGGTTGGAAGGAGAAAGCCGGCTTTTCACCCACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RRFCRMMSSFSPISR*PRGWKEKAGFSPTT Trigger: TGTGGTGGGTGAAAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGAGAAACTGGACATCATCCGGCAGAAGCGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CAA 90 bp | CCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGGACGGCCTTCTTCCGGGGGATGGGTTGGCATTaGGTGTCATTCCACAGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PFCSALRWEEEAGTAFFRGMGWH*VSFHSL Trigger: AAGGCTGTGGAATGACACCAAATGCCAACCCATCCC...CCGGAAGAAGGCCGTCCCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 90 bp | CGGATGATGTCCAGTTTCTCGCCAATTTCCAGGTGGCCTCGGGGTTaGAAGGAGAAAGCCGGCTTTTCACCCACCACACGGACCACTCTA | + |
|
Preference number: 5 (lower is better) Translates to: RMMSSFSPISRWPRG*KEKAGFSPTTRTTL Trigger: TAGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGAGAAACTGGACATCATCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 90 bp | TGGTGTCATTCCACAGCCTTCAAACACAGCTCCTCTCAGAAGGTCTaGGACCGTCATGGGGGTGAAGCCCCTGCTGACAAGCTTGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: WCHSTAFKHSSSQKV*DRHGGEAPADKLAE Trigger: CTCAGCAAGCTTGTCAGCAGGGGCTTCACCCCCATGACGGTCCCAGACCTTCTGAGAGGAGCTGTGTTTGAAGGCTGTGGAATGACACCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 90 bp | CGAGGACTGAACCATCCTTTTGCTGATTGCTTTCCAGGAGGGCAATaGGGACTCGGGGAACAGCACAAGCGGTGGCATTCACCGTGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGLNHPFADCFPGGQ*GLGEQHKRWHSPCV Trigger: CACACACGGTGAATGCCACCGCTTGTGCTGTTCCCCGAGTCCTCATTGCCCTCCTGGAAAGCAATCAGCAAAAGGATGGTTCAGTCCTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 90 bp | TGGTCTCCTTGCTCTTGGAAAAGACCTGGAGGTAGACCTTGTCTCTaGCCTGCTGGCAGCCATCTTGGGACTGGGATGGGGTCCGATCTA | + |
|
Preference number: 5 (lower is better) Translates to: WSPCSWKRPGGRPCL*PAGSHLGTGMGSDL Trigger: TAGATCGGACCCCATCCCAGTCCCAAGATGGCTGCCAGCAGGTCAGAGACAAGGTCTACCTCCAGGTCTTTTCCAAGAGCAAGGAGACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
||
| CDS GCA 90 bp | AATGAGGACTCGGGGAACAGCACAAGCGGTGGCATTCACCGTGTGTaGGAACTGCAGCTCCCCGGTCTCTGTCTCAAACATGATGTACAG | + |
|
Preference number: 5 (lower is better) Translates to: NEDSGNSTSGGIHRV*ELQLPGLCLKHDVQ Trigger: CTGTACATCATGTTTGAGACAGAGACCGGGGAGCTGCAGTTCGCACACACGGTGAATGCCACCGCTTGTGCTGTTCCCCGAGTCCTCATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS-3UTR CAA 90 bp | CGACCATTTATTGTGGCCATTCTGCTCCGCACTGAGGTGGGAAGAAGAAGCTGGCCCCTGCTGACAAGCTaGCTGAGGGTGAAGTTGACC | + |
|
Preference number: 5 (lower is better) Translates to: RPFIVAILLRTEVGRRSWPLLTS*LRVKLT Trigger: GGTCAACTTCACCCTCAGCAAGCTTGTCAGCAGGGG...CCAGCTTCTTCTTCCCACCTCAGTGCGGAGCAGAATGGCCACAATAAATGGTCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 90 bp | GTTAAGGTCTTCGAAGCGAGAGGGGTCAATATTGTAAATCTGGGATaGGTTGGCATTTGGTGTCATTCCACAGCCTTCAAACACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: VKVFEARGVNIVNLG*VGIWCHSTAFKHSS Trigger: GGAGCTGTGTTTGAAGGCTGTGGAATGACACCAAATGCCAACCCATCCCAGATTTACAATATTGACCCCTCTCGCTTCGAAGACCTTAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 72 bp | TGGCTGCACACGCAGCGTCCTCGGGACCGGAGCCCCTaGCGAGCCAGGAAAGGCCACCAAAGCCGCGCCATG | + |
|
Preference number: 6 (lower is better) Translates to: WLHTQRPRDRSP*RARKGHQSRAM Trigger: CATGGCGCGGCTTTGGTGGCCTTTCCTGGCTCGCCAGGGGCTCCGGTCCCGAGGACGCTGCGTGTGCAGCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CAA 90 bp | CACGTGGAGATAATCGCAGGCAGGTCGGCCGGCCGCAGCTCCCCCTaGCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTGGGCATGCGCAC | + |
|
Preference number: 6 (lower is better) Translates to: HVEIIAGRSAGRSSP*RSSRERAAFSGHAH Trigger: GTGCGCATGCCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGCCGGCCGACCTGCCTGCGATTATCTCCACGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CAA 72 bp | ATAATCGCAGGCAGGTCGGCCGGCCGCAGCTCCCCCTaGCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: IIAGRSAGRSSP*RSSRERAAFSG Trigger: CCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGCAAGGGGGAGCTGCGGCCGGCCGACCTGCCTGCGATTAT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CAA 90 bp | CCGGCCTCGGGCCCGCAGGCCCTGATATTGGGGGTCCTTCTGCACTaGGTCACTGTCTTGGTTTGCCAGCAGGGCCCGCACTGCCTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PASGPQALILGVLLH*VTVLVCQQGPHCLC Trigger: GCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 72 bp | GGCAGCCATCTTGGGACTGGGATGGGGTCCGATCTATaGACAGCAGGGCCCGCACTGCCTCTGCCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GSHLGTGMGSDL*TAGPALPLPQP Trigger: AGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGTGCATAGATCGGACCCCATCCCAGTCCCAAGATGGCTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
||
| CDS CCA 72 bp | CCCCTTGCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTaGGCATGCGCACACCGACTCCATGTCCAAGTAGGG | + |
|
Preference number: 6 (lower is better) Translates to: PLAELQGARGFF*ACAHRLHVQVG Trigger: CCCTACTTGGACATGGAGTCGGTGTGCGCATGCCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGCAAGGGG 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS GCA 72 bp | GCGGAGCTCCAGGGAGCGCGCGGCTTTTTCTGGGCATaGGCACACCGACTCCATGTCCAAGTAGGGAAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: AELQGARGFFWA*AHRLHVQVGKL Trigger: GAGCTTCCCTACTTGGACATGGAGTCGGTGTGCGCATGCCCAGAAAAAGCCGCGCGCTCCCTGGAGCTCCGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS GCA 72 bp | AGGCTCCGGATCTGCTCTCGAAGCTGCCTCAACTCCTaGCACGTGGAGATAATCGCAGGCAGGTCGGCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: RLRICSRSCLNS*HVEIIAGRSAG Trigger: GCCGGCCGACCTGCCTGCGATTATCTCCACGTGGCAGGAGTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCT 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CCA 72 bp | ACTCGTTTCTCCGTAGCGAAACTCCTCCTTGGGTTCTaGCTGCACACGCAGCGTCCTCGGGACCGGAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: TRFSVAKLLLGF*LHTQRPRDRSP Trigger: GGGGCTCCGGTCCCGAGGACGCTGCGTGTGCAGCCAGAACCCAAGGAGGAGTTTCGCTACGGAGAAACGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CCA 72 bp | GTCTCTGACCTGCTGGCAGCCATCTTGGGACTGGGATaGGGTCCGATCTATGCACAGCAGGGCCCGCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: VSDLLAAILGLG*GPIYAQQGPHC Trigger: GCAGTGCGGGCCCTGCTGTGCATAGATCGGACCCCATCCCAGTCCCAAGATGGCTGCCAGCAGGTCAGAGAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
||
| CDS CAA 90 bp | GAGCTGCTTCCGGATCTCCCGGCCTCGGGCCCGCAGGCCCTGATATaGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTGCCAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ELLPDLPASGPQALI*GVLLHLVTVLVCQQ Trigger: CTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGGGCCCGAGGCCGGGAGATCCGGAAGCAGCTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 90 bp | CCGCAGGCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTaGGTTTGCCAGCAGGGCCCGCACTGCCTCTGCCACAGCCTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: PQALILGVLLHLVTV*VCQQGPHCLCHSLL Trigger: AAGGAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCCTGCGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 72 bp | TTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTTaGCAGCAGGGCCCGCACTGCCTCTGCCACAGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LGVLLHLVTVLV*QQGPHCLCHSL Trigger: GAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 72 bp | GGCCTCGGCCAGGCATCCAGGCCTCAATGTCGAACTTaGGATAAGCAGGAAGGCCCAGTTCCTGGGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: GLGQASRPQCRT*DKQEGPVPGWA Trigger: TGCCCACCCAGGAACTGGGCCTTCCTGCTTATCGCAAGTTCGACATTGAGGCCTGGATGCCTGGCCGAGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 90 bp | GGCCCTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTaGCCAGCAGGGCCCGCACTGCCTCTGCCACAGCCTCCTTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GPDIGGPSALGHCLG*PAGPALPLPQPPSL Trigger: CAGAGAAGGAGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAGGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | ATTGGGGGTCCTTCTGCACTTGGTCACTGTCTTGGTTaGCCAGCAGGGCCCGCACTGCCTCTGCCACAGCCT | + |
|
Preference number: 6 (lower is better) Translates to: IGGPSALGHCLG*PAGPALPLPQP Trigger: AGGCTGTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | GTGAAGCCCCTGCTGACAAGCTTGCTGAGGGTGAAGTaGACCAGGCCGTGCTGTAAGAGGGCTCCTGCCCCA | + |
|
Preference number: 6 (lower is better) Translates to: VKPLLTSLLRVK*TRPCCKRAPAP Trigger: TGGGGCAGGAGCCCTCTTACAGCACGGCCTGGTCAACTTCACCCTCAGCAAGCTTGTCAGCAGGGGCTTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | GGGACCGTCATGGGGGTGAAGCCCCTGCTGACAAGCTaGCTGAGGGTGAAGTTGACCAGGCCGTGCTGTAAG | + |
|
Preference number: 6 (lower is better) Translates to: GTVMGVKPLLTS*LRVKLTRPCCK Trigger: CTTACAGCACGGCCTGGTCAACTTCACCCTCAGCAAGCTTGTCAGCAGGGGCTTCACCCCCATGACGGTCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 72 bp | TTCTCTGCCTCCAGGCTCCGGATCTGCTCTCGAAGCTaGCTCAACTCCTGCCACGTGGAGATAATCGCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: FSASRLRICSRS*LNSCHVEIIAG Trigger: GCCTGCGATTATCTCCACGTGGCAGGAGTTGAGGCAGCTTCGAGAGCAGATCCGGAGCCTGGAGGCAGAGAA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CCA 72 bp | CGAACTTGCGATAAGCAGGAAGGCCCAGTTCCTGGGTaGGCATGTCCAGTACCCGGAAGTGCAAGCCCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RTCDKQEGPVPG*ACPVPGSASPA Trigger: AGCTGGGCTTGCACTTCCGGGTACTGGACATGCCCACCCAGGAACTGGGCCTTCCTGCTTATCGCAAGTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | CTGATATTGGGGGTCCTTCTGCACTTGGTCACTGTCTaGGTTTGCCAGCAGGGCCCGCACTGCCTCTGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: LILGVLLHLVTV*VCQQGPHCLCH Trigger: GTGGCAGAGGCAGTGCGGGCCCTGCTGGCAAACCAAGACAGTGACCAAGTGCAGAAGGACCCCCAATATCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 90 bp | CCGGATGATGTCCAGTTTCTCGCCAATTTCCAGGTGGCCTCGGGGTaGGAAGGAGAAAGCCGGCTTTTCACCCACCACACGGACCACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PDDVQFLANFQVASG*EGESRLFTHHTDHS Trigger: AGAGTGGTCCGTGTGGTGGGTGAAAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGAGAAACTGGACATCATCCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 72 bp | GTGCGAACTGCAGCTCCCCGGTCTCTGTCTCAAACATaGTGTACAGGCGGCGGCTCTGGAAGTCTGTGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: VRTAAPRSLSQT*CTGGGSGSLCS Trigger: ACTGCACAGACTTCCAGAGCCGCCGCCTGTACATCATGTTTGAGACAGAGACCGGGGAGCTGCAGTTCGCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 72 bp | AGAGCGGCGGGCACGAGGACTGAACCATCCTTTTGCTaGTTGCTTTCCAGGAGGGCAATGAGGACTCGGGGA | + |
|
Preference number: 6 (lower is better) Translates to: RAAGTRTEPSFC*LLSRRAMRTRG Trigger: TCCCCGAGTCCTCATTGCCCTCCTGGAAAGCAATCAGCAAAAGGATGGTTCAGTCCTCGTGCCCGCCGCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS GCA 72 bp | TCGGGGAACAGCACAAGCGGTGGCATTCACCGTGTGTaGGAACTGCAGCTCCCCGGTCTCTGTCTCAAACAT | + |
|
Preference number: 6 (lower is better) Translates to: SGNSTSGGIHRV*ELQLPGLCLKH Trigger: ATGTTTGAGACAGAGACCGGGGAGCTGCAGTTCGCACACACGGTGAATGCCACCGCTTGTGCTGTTCCCCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 72 bp | TCCAGTTTCTCGCCAATTTCCAGGTGGCCTCGGGGTTaGAAGGAGAAAGCCGGCTTTTCACCCACCACACGG | + |
|
Preference number: 6 (lower is better) Translates to: SSFSPISRWPRG*KEKAGFSPTTR Trigger: CCGTGTGGTGGGTGAAAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGAGAAACTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | GAGGTAGACCTTGTCTCTGACCTGCTGGCAGCCATCTaGGGACTGGGATGGGGTCCGATCTATGCACAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EVDLVSDLLAAI*GLGWGPIYAQQ Trigger: CTGCTGTGCATAGATCGGACCCCATCCCAGTCCCAAGATGGCTGCCAGCAGGTCAGAGACAAGGTCTACCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
||
| CDS TCA 72 bp | GGGCCTGTCACCCCAAACATCTCCACCTTAGTGAAGTaGTGGACTCGGTACAGTCCCCAAGGCTCCTTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GPVTPNISTLVK*WTRYSPQGSFP Trigger: TGGGAAGGAGCCTTGGGGACTGTACCGAGTCCATCACTTCACTAAGGTGGAGATGTTTGGGGTGACAGGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 72 bp | TGCTCTTGGAAAAGACCTGGAGGTAGACCTTGTCTCTaGCCTGCTGGCAGCCATCTTGGGACTGGGATGGGG | + |
|
Preference number: 6 (lower is better) Translates to: CSWKRPGGRPCL*PAGSHLGTGMG Trigger: CCCCATCCCAGTCCCAAGATGGCTGCCAGCAGGTCAGAGACAAGGTCTACCTCCAGGTCTTTTCCAAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000207877.2 |
||
| CDS GCA 72 bp | CATGTCCAAGTAGGGAAGCTCGCTGTAGCCCTCTCGTaGGTGTTCGTACAGGAGGTTCCGGACTCGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: HVQVGKLAVALS*VFVQEVPDSFL Trigger: GAGAAACGAGTCCGGAACCTCCTGTACGAACACGCACGAGAGGGCTACAGCGAGCTTCCCTACTTGGACATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000094632.6 ENSMUST00000207877.2 |
||
| CDS CCA 72 bp | ACCATCCTGACTGGAAGGTCCCTGAAAGCTACAGAGTaGTCCATGAAGTATCCTGCCAGCCCCACCTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TILTGRSLKATE*SMKYPASPTSA Trigger: GGCAGAGGTGGGGCTGGCAGGATACTTCATGGACCACTCTGTAGCTTTCAGGGACCTTCCAGTCAGGATGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CCA 72 bp | TGCCGGATGATGTCCAGTTTCTCGCCAATTTCCAGGTaGCCTCGGGGTTGGAAGGAGAAAGCCGGCTTTTCA | + |
|
Preference number: 6 (lower is better) Translates to: CRMMSSFSPISR*PRGWKEKAGFS Trigger: TGAAAAGCCGGCTTTCTCCTTCCAACCCCGAGGCCACCTGGAAATTGGCGAGAAACTGGACATCATCCGGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS TCA 72 bp | AACCATCCTTTTGCTGATTGCTTTCCAGGAGGGCAATaGGGACTCGGGGAACAGCACAAGCGGTGGCATTCA | + |
|
Preference number: 6 (lower is better) Translates to: NHPFADCFPGGQ*GLGEQHKRWHS Trigger: TGAATGCCACCGCTTGTGCTGTTCCCCGAGTCCTCATTGCCCTCCTGGAAAGCAATCAGCAAAAGGATGGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 90 bp | CGAAGCGAGAGGGGTCAATATTGTAAATCTGGGATGGGTTGGCATTaGGTGTCATTCCACAGCCTTCAAACACAGCTCCTCTCAGAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSERGQYCKSGMGWH*VSFHSLQTQLLSEG Trigger: ACCTTCTGAGAGGAGCTGTGTTTGAAGGCTGTGGAATGACACCAAATGCCAACCCATCCCAGATTTACAATATTGACCCCTCTCGCTTCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
||
| CDS CAA 72 bp | AGGGGTCAATATTGTAAATCTGGGATGGGTTGGCATTaGGTGTCATTCCACAGCCTTCAAACACAGCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RGQYCKSGMGWH*VSFHSLQTQLL Trigger: GAGGAGCTGTGTTTGAAGGCTGTGGAATGACACCAAATGCCAACCCATCCCAGATTTACAATATTGACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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| CDS CCA 72 bp | TTCGAAGCGAGAGGGGTCAATATTGTAAATCTGGGATaGGTTGGCATTTGGTGTCATTCCACAGCCTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FEARGVNIVNLG*VGIWCHSTAFK Trigger: TTTGAAGGCTGTGGAATGACACCAAATGCCAACCCATCCCAGATTTACAATATTGACCCCTCTCGCTTCGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000094632.6 |
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