Pregenerated sensors for SARS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068739Ensembl transcript IDs: ENSMUST00000090553.12, ENSMUST00000102625.11, ENSMUST00000132467.8, ENSMUST00000153499.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTaGGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGAT | + |
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Preference number: 1 (lower is better) Translates to: RQMVSPAAVQSDGTG*GVVLGLSVPGQAWD Trigger: ATCCCAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR CCA 90 bp | TGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTaGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGATCCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: WFPQPLCSQMGQGEE*FSASLSQGRPGIPA Trigger: TGCTGGGATCCCAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR CCA 90 bp | CTGAGCCAGACTCCCACCTGGCCACGCTACCTCATTCTCCCACTCTaGGACAGGTATAATCATGCCCCCACCCTACCTTCTGGGGCCACA | + |
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Preference number: 1 (lower is better) Translates to: LSQTPTWPRYLILPL*DRYNHAPTLPSGAT Trigger: TGTGGCCCCAGAAGGTAGGGTGGGGGCATGATTATACCTGTCCCAGAGTGGGAGAATGAGGTAGCGTGGCCAGGTGGGAGTCTGGCTCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 90 bp | GCCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTaGAGAGACCCCTGGCCCGTGCGAGGAGAAGGGAACACCTGCTCT | + |
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Preference number: 1 (lower is better) Translates to: ALPRDALLRGFTSHQ*RDPWPVRGEGNTCS Trigger: AGAGCAGGTGTTCCCTTCTCCTCGCACGGGCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR GCA 90 bp | CTTGGCCCTCTCTGGGGAAGACAGATGTGGGGAGAAATGACTGACTaGTCAGGGTGTCTAGAGTCCAAGAGCAGGCTGCTCCAGGAAACT | + |
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Preference number: 1 (lower is better) Translates to: LGPLWGRQMWGEMTD*SGCLESKSRLLQET Trigger: AGTTTCCTGGAGCAGCCTGCTCTTGGACTCTAGACACCCTGAGCAGTCAGTCATTTCTCCCCACATCTGTCTTCCCCAGAGAGGGCCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 90 bp | GGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGTTGAGAACCTaGGTTAGCTCTTGTCCTGAGAGCATGGGACAGTGGTCTGTTTTC | + |
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Preference number: 1 (lower is better) Translates to: GKGFVKEVTTHRLRT*VSSCPESMGQWSVF Trigger: GAAAACAGACCACTGTCCCATGCTCTCAGGACAAGAGCTAACTCAGGTTCTCAACCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 90 bp | ATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGTTaGGAACCTGAGTTAGCTCTTGTCCTGAGAGCATGGGACAGTGGT | + |
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Preference number: 1 (lower is better) Translates to: IFWEKGLSRRSRLTG*EPELALVLRAWDSG Trigger: ACCACTGTCCCATGCTCTCAGGACAAGAGCTAACTCAGGTTCTCAACCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR TCA 90 bp | GAGACAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTGCCCAAGGCTACAGGGCAGTTGAGGTGGGCTaGGCTGAAGCCCTGTCACAA | + |
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Preference number: 2 (lower is better) Translates to: ETRADTGRQNPVCAQGYRAVEVG*AEALSQ Trigger: TTGTGACAGGGCTTCAGCTCAGCCCACCTCAACTGC...CCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCGTCCCAGGGCAGGCCTaGGATCCCAGCAGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: PSPEMLYCVASPVISEETVPGQA*DPSRLS Trigger: ACTAAGCCTGCTGGGATCCCAGGCCTGCCCTGGGAC...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR-3UTR GCA 90 bp | GTCAGCTACCACACTCAGCCTTCTCTCTGCGAGAAGCCCTTCCTAGGGAATGTATTTCCCCAGCCGCTGTaGAGTCAGATGGGACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: VSYHTQPSLCEKPFLGNVFPQPL*SQMGQG Trigger: ACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAA...TACATTCCCTAGGAAGGGCTTCTCGCAGAGAGAAGGCTGAGTGTGGTAGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CAA 90 bp | ATAAGCACACGGCCTCTTTGCTTGCTTGGTACTGGGCCAAAGCAGTaGAGGTGGGCTGAGCTGAAGCCCTGTCACAAGCAGGGTCATACT | + |
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Preference number: 2 (lower is better) Translates to: ISTRPLCLLGTGPKQ*RWAELKPCHKQGHT Trigger: AGTATGACCCTGCTTGTGACAGGGCTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGTACCAAGCAAGCAAAGAGGCCGTGTGCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR GCA 90 bp | CAGATGTGGGGAGAAATGACTGACTGCTCAGGGTGTCTAGAGTCCAAGAGCAGGACTCAGCCTTCTCTCTaGGAGAAGCCCTTCCTAGGG | + |
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Preference number: 2 (lower is better) Translates to: QMWGEMTDCSGCLESKSRTQPSL*EKPFLG Trigger: CCCTAGGAAGGGCTTCTCGCAGAGAGAAGGCTGAGT...CCTGCTCTTGGACTCTAGACACCCTGAGCAGTCAGTCATTTCTCCCCACATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGGTCCCAGGGCAGGCCTaGGATCCCAGCAGGCTTAGT | + |
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Preference number: 2 (lower is better) Translates to: TKSKVNQLPRRNKHTASLVPGQA*DPSRLS Trigger: ACTAAGCCTGCTGGGATCCCAGGCCTGCCCTGGGAC...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCCCTTGTAGGCACCCAGTTTTGACAGGCTTACCAAGAGCAAGGTTAACCGACAAGGTTCAAGTCTaGGGAGGGGAGGAGACTGGG | + |
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Preference number: 2 (lower is better) Translates to: FPPCRHPVLTGLPRARLTDKVQV*GGEETG Trigger: CCCAGTCTCCTCCCCTCCCCAGACTTGAACCTTGTC...GGTTAACCTTGCTCTTGGTAAGCCTGTCAAAACTGGGTGCCTACAAGGGGGAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | CATAATGTAAATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGGCCACGGAGCCTGCCTaGGCAGCCAGCTGCCACAGC | + |
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Preference number: 2 (lower is better) Translates to: HNVNILGKGFVKEVTTHRATEPA*AASCHS Trigger: GCTGTGGCAGCTGGCTGCCCAGGCAGGCTCCGTGGC...CCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | ACAGCAGGCAGAAGAGCCTCGGTGTTTCCCCCTTGTAGGCACCCAGTTTTGACACTCATTCTCCCACTCTaGGACAGGTATAATCATGCC | + |
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Preference number: 2 (lower is better) Translates to: TAGRRASVFPPCRHPVLTLILPL*DRYNHA Trigger: GGCATGATTATACCTGTCCCAGAGTGGGAGAATGAG...TGTCAAAACTGGGTGCCTACAAGGGGGAAACACCGAGGCTCTTCTGCCTGCTGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CAA 90 bp | AGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTaGCTTGGTACTGGGCCAAAGCAGTTGAGGTGGGCTGAGCTGAAG | + |
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Preference number: 2 (lower is better) Translates to: RLTNSLEEISTRPLC*LGTGPKQLRWAELK Trigger: CTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR TCA 90 bp | TTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTTGCTTGGTACTTCAGATGGGACAGGGTaGGGAGTGGTTCTCGGCCTC | + |
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Preference number: 2 (lower is better) Translates to: LTNSLEEISTRPLCLLGTSDGTG*GVVLGL Trigger: GAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGA...AGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR TCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGTTCACCAGTCATCAGTaGAGAGACCCCTGGCCCGTG | + |
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Preference number: 2 (lower is better) Translates to: TKSKVNQLPRRNKHTASLFTSHQ*RDPWPV Trigger: CACGGGCCAGGGGTCTCTTCACTGATGACTGGTGAA...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | TTGGCAATGAGGCACACATTCTGTGAAGATTACTTGGCCCTCTCTGGGGAAGACCAAAGAAGCCTTATCTaGGAGAGCAGTTCAGGCCCA | + |
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Preference number: 2 (lower is better) Translates to: LAMRHTFCEDYLALSGEDQRSLI*ESSSGP Trigger: TGGGCCTGAACTGCTCTCCCAGATAAGGCTTCTTTG...GTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGAGATGCTTTATTGCGTaGCTTCACCAGTCATCAGTG | + |
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Preference number: 2 (lower is better) Translates to: TKSKVNQLPRRNKHTASLRCFIA*LHQSSV Trigger: CACTGATGACTGGTGAAGCCACGCAATAAAGCATCT...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR TCA 90 bp | CATAATGTAAATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGGATACAGATCACAGATaGAAGAGAGCTGGTGAAGAA | + |
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Preference number: 2 (lower is better) Translates to: HNVNILGKGFVKEVTTHRDTDHR*KRAGEE Trigger: TTCTTCACCAGCTCTCTTTCATCTGTGATCTGTATC...CCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CAA 90 bp | GGCAGGAGTAACTTTACAGAGAATCCCAATCCTTGTCCTGACAACTaGTGTTACAACTCCAGGCTTTCTAAAAAGCCTTTACTAAATAAA | + |
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Preference number: 2 (lower is better) Translates to: GRSNFTENPNPCPDN*CYNSRLSKKPLLNK Trigger: TTTATTTAGTAAAGGCTTTTTAGAAAGCCTGGAGTTGTAACACAAGTTGTCAGGACAAGGATTGGGATTCTCTGTAAAGTTACTCCTGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CAA 90 bp | CATAACTGCAATTTTGCTAATTACATAAAGCATAATGTAAATATTTaGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: HNCNFANYIKHNVNI*GKGFVKEVTTHRLR Trigger: TCTCAACCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATGCTTTATGTAATTAGCAAAATTGCAGTTATG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CCA 72 bp | CAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTaGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGG | + |
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Preference number: 3 (lower is better) Translates to: QPLCSQMGQGEE*FSASLSQGRPG Trigger: CCCAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR TCA 72 bp | GCTCTTTGTCCTCTTGTCCAGGCTGTTTCCCAGGGCTaGAGCCAAGGGGCCACGGAGCCTGCCTGGGCAGCC | + |
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Preference number: 3 (lower is better) Translates to: ALCPLVQAVSQG*SQGATEPAWAA Trigger: GGCTGCCCAGGCAGGCTCCGTGGCCCCTTGGCTTCAGCCCTGGGAAACAGCCTGGACAAGAGGACAAAGAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 72 bp | GCAGGTGCCCAGCTATTAGGACACAGTGGGAGTTCCTaGGGACAGACCCGTCCTGCACCCCTCTGCCCTGCC | + |
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Preference number: 3 (lower is better) Translates to: AGAQLLGHSGSS*GQTRPAPLCPA Trigger: GGCAGGGCAGAGGGGTGCAGGACGGGTCTGTCCTCAGGAACTCCCACTGTGTCCTAATAGCTGGGCACCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR GCA 72 bp | GACAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTaGCCAAGGCTACAGGCGTTAGAGGACGGGGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: DKSGYRKAEPCL*PRLQALEDGGG Trigger: CCCACCCCCGTCCTCTAACGCCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTGTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CCA 72 bp | ACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATaGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGT | + |
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Preference number: 3 (lower is better) Translates to: TADGFPSRCAVR*DRVRSGSRPLC Trigger: ACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR CCA 72 bp | CGAGGAGAAGGGAACACCTGCTCTGTCCACGGCAGATaGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAG | + |
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Preference number: 3 (lower is better) Translates to: RGEGNTCSVHGR*FPQPLCSQMGQ Trigger: CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCAGGTGTTCCCTTCTCCTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR-3UTR CAA 90 bp | CAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTGCCCAAGGCTACAGGCGTTACTGGGCCAAAGCAGTaGAGGTGGGCTGAGCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: QERIQEGRTLSVPKATGVTGPKQ*RWAELK Trigger: CTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGT...AACGCCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CAA 90 bp | GAGACAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTGCCCAAGGCTACAGGGAGCAGCCTGGCTCTTaGTCCTCTTGTCCAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: ETRADTGRQNPVCAQGYREQPGS*SSCPGC Trigger: ACAGCCTGGACAAGAGGACAAAGAGCCAGGCTGCTC...CCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 72 bp | GGGTCATACTCAGCTCCCAACCTCTGCAAGTCACTCTaGGCCAGACTCCCACCTGGCCACGCTACCTCATTC | + |
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Preference number: 3 (lower is better) Translates to: GSYSAPNLCKSL*ARLPPGHATSF Trigger: GAATGAGGTAGCGTGGCCAGGTGGGAGTCTGGCTCAGAGTGACTTGCAGAGGTTGGGAGCTGAGTATGACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CCA 72 bp | ACTCCCACCTGGCCACGCTACCTCATTCTCCCACTCTaGGACAGGTATAATCATGCCCCCACCCTACCTTCT | + |
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Preference number: 3 (lower is better) Translates to: TPTWPRYLILPL*DRYNHAPTLPS Trigger: AGAAGGTAGGGTGGGGGCATGATTATACCTGTCCCAGAGTGGGAGAATGAGGTAGCGTGGCCAGGTGGGAGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 72 bp | AGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTaGAGAGACCCCTGGCCCGTGCGAGGAGAAGGGAAC | + |
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Preference number: 3 (lower is better) Translates to: RDALLRGFTSHQ*RDPWPVRGEGN Trigger: GTTCCCTTCTCCTCGCACGGGCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| 3UTR TCA 72 bp | CTTGCTTGGTACTGGGCCAAAGCAGTTGAGGTGGGCTaGGCTGAAGCCCTGTCACAAGCAGGGTCATACTCA | + |
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Preference number: 3 (lower is better) Translates to: LAWYWAKAVEVG*AEALSQAGSYS Trigger: TGAGTATGACCCTGCTTGTGACAGGGCTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGTACCAAGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR GCA 72 bp | GAGGAGACTGGGGAAGCCTTGTGCCCTCCCCAGAGATaGTTTATTGCGTGGCTTCACCAGTCATCAGTGAAG | + |
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Preference number: 3 (lower is better) Translates to: EETGEALCPPQR*FIAWLHQSSVK Trigger: CTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGGCACAAGGCTTCCCCAGTCTCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR GCA 72 bp | TGGAGGAGTGTCAGCTACCACACTCAGCCTTCTCTCTaGGAGAAGCCCTTCCTAGGGAATGTATGTGCGTGC | + |
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Preference number: 3 (lower is better) Translates to: WRSVSYHTQPSL*EKPFLGNVCAC Trigger: GCACGCACATACATTCCCTAGGAAGGGCTTCTCGCAGAGAGAAGGCTGAGTGTGGTAGCTGACACTCCTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CCA 72 bp | CTTTGCTTGCTTGGTACTGGGCCAAAGCAGTTGAGGTaGGCTGAGCTGAAGCCCTGTCACAAGCAGGGTCAT | + |
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Preference number: 3 (lower is better) Translates to: LCLLGTGPKQLR*AELKPCHKQGH Trigger: ATGACCCTGCTTGTGACAGGGCTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGTACCAAGCAAGCAAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CAA 90 bp | CAGATGTGGGGAGAAATGACTGACTGCTCAGGGTGTCTAGAGTCCAAGAGCAGGTGGCTCTTTGTCCTCTaGTCCAGGCTGTTTCCCAGG | + |
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Preference number: 3 (lower is better) Translates to: QMWGEMTDCSGCLESKSRWLFVL*SRLFPR Trigger: CCTGGGAAACAGCCTGGACAAGAGGACAAAGAGCCA...CCTGCTCTTGGACTCTAGACACCCTGAGCAGTCAGTCATTTCTCCCCACATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 72 bp | TTTGTCAAGGAGGTCACGACTCACAGGTTGAGAACCTaGGTTAGCTCTTGTCCTGAGAGCATGGGACAGTGG | + |
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Preference number: 3 (lower is better) Translates to: FVKEVTTHRLRT*VSSCPESMGQW Trigger: CCACTGTCCCATGCTCTCAGGACAAGAGCTAACTCAGGTTCTCAACCTGTGAGTCGTGACCTCCTTGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR TCA 72 bp | GTTCTCCTCTGGTTTGGCAATGAGGCACACATTCTGTaGAGATTACTTGGCCCTCTCTGGGGAAGACAGATG | + |
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Preference number: 3 (lower is better) Translates to: VLLWFGNEAHIL*RLLGPLWGRQM Trigger: CATCTGTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAAACCAGAGGAGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CAA 90 bp | CATAATGTAAATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGCCTTGTCCTGACAACTaGTGTTACAACTCCAGGCTT | + |
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Preference number: 3 (lower is better) Translates to: HNVNILGKGFVKEVTTHRPCPDN*CYNSRL Trigger: AAGCCTGGAGTTGTAACACAAGTTGTCAGGACAAGG...CCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR-3UTR CAA 90 bp | CATAATGTAAATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGTGGTCTGTTTTCTATTaGTATGAAGCATGGGAAGAC | + |
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Preference number: 3 (lower is better) Translates to: HNVNILGKGFVKEVTTHRWSVFY*YEAWED Trigger: GTCTTCCCATGCTTCATACAAATAGAAAACAGACCA...CCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR TCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCCAGCCCCGGGTCCTTaGAGCGCTTCTCCTGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSPAPGP*SASPAS Trigger: AGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGG...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | CAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGGATGGGCAGATCCTCTaGCCGCAGCCACTCGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: QPLCSQMGQGEEWFSASLDGQIL*PQPLVP Trigger: CGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATC...CAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGGATGGGCAGATCCTCTaGCCGCAGCCACTCGTCCCG | + |
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Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEEDGQIL*PQPLVP Trigger: CGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATC...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCCCTGCGTCTCTCGAATaGGGGCTGGGTCCCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPPASLE*GLGPLL Trigger: AAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGG...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | CCACGGAGCCTGCCTGGGCAGCCAGCTGCCACAGCAGGCAGAAGAGCCTCGGTGCTAGCGCGTCTGCAGTaGGGTCATCGAAATTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRSLPGQPAATAGRRASVLARLQ*GHRNSA Trigger: TGCTGAATTTCGATGACCTCACTGCAGACGCGCTAG...CACCGAGGCTCTTCTGCCTGCTGTGGCAGCTGGCTGCCCAGGCAGGCTCCGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCAGAGGCCAGCGTACTTaGTGGGCAGATCCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSRGQRT*WADPLA Trigger: GGCCAGAGGATCTGCCCATCAAGTACGCTGGCCTCT...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | TGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGACTCTCGAATGAGGGCTaGGTCCCCTCCTTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: WDRVRSGSRPLCPRAGLGLSNEG*VPSFIH Trigger: GTGGATAAAGGAGGGGACCCAGCCCTCATTCGAGAG...TCCCAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGTCTGCTTTCACCAGCTaGTCCACCAGCCCCGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQSAFTS*STSPGS Trigger: GGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGA...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGCAGAGCCGCGATaGGCTGCTCTGAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQGAEPR*AALRWQ Trigger: TTGCCACCTCAGAGCAGCCCATCGCGGCTCTGCACC...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCGGTAGTTCTCCAGGATaGCGCAGATGGTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FPQPLCSQMGQGEEWFSAGSSPG*RRWSGW Trigger: CCACCCGGACCATCTGCGCCATCCTGGAGAACTACC...GGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | CCACGGAGCCTGCCTGGGCAGCCAGCTGCCACAGCAGGCAGAAGAGCCTCGGTGCTTGTTCAAGTTGTCTaGCCGAAATCTGCATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: PRSLPGQPAATAGRRASVLVQVV*PKSASS Trigger: CGACGATGCAGATTTCGGGCAGACAACTTGAACAAG...CACCGAGGCTCTTCTGCCTGCTGTGGCAGCTGGCTGCCCAGGCAGGCTCCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGGAAGGGGGTGTAGATTaGAGTGTAGCCCCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEEEGGVD*SVAPTP Trigger: GGGAGTCGGGGCTACACTCCAATCTACACCCCCTTC...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTTCATCAAACTGGCTaGGCTGGGCCACTTCCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FPSRCAVRWDRVRSGSRPLHQTG*AGPLPA Trigger: TGCAGGAAGTGGCCCAGCTCAGCCAGTTTGATGAAG...AGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCTCGCCACTCACTGTCTaGTTTCACCAGCTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSSPLTV*FHQLVH Trigger: GTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGA...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGAGAGCCGCGATGGGCTaGTCTGAGGTGGCAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQRAAMG*SEVAIK Trigger: CTTGATTGCCACCTCAGAGCAGCCCATCGCGGCTCT...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCTCTCTGGCACAGCGATaGCCTTCTCTGCCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPSLAQR*PSLPGS Trigger: ACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGA...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCCTCTCGAATGAGGGCTaGGTCCCCTCCTTTATCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPLSNEG*VPSFIH Trigger: GTGGATAAAGGAGGGGACCCAGCCCTCATTCGAGAG...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGTCGAGCTTCTTACTaGCAGCGTGATTCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLGRASY*QRDSRS Trigger: GCTCCTTGAATCACGCTGCCAGTAAGAAGCTCGACC...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCTCCCTCAACTTCTCTaGCACAGCGATGCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSLPQLL*HSDALL Trigger: GAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAG...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGCTCCCTCAACTTCTCTaGCACAGCGATGCCCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGELPQLL*HSDALL Trigger: GAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAG...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGTCCATGCTCTGCAGCTaGTTCTCCAGGGGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQSMLCS*FSRGTS Trigger: AGAGGTCCCCCTGGAGAACCAGCTGCAGAGCATGGA...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | TTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCGCGATGGGCTGCTCTaGGGTGGCAATCAAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSRCAVRWDRVRSGSRPRDGLL*GGNQVF Trigger: AAATACTTGATTGCCACCTCAGAGCAGCCCATCGCG...AGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGTTGAAGCGCTTCTCCTaGGTCTCTCGAATGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGELKRFS*VSRMRA Trigger: AGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAA...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGCCCCAAGGTACGCAGTaGATATTGGATAAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGEPQGTQ*ILDKRL Trigger: CAGGCGCTTATCCAATATGCACTGCGTACCTTGGGG...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | CAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGAGCTGGGCCACTTCCTaGATGACCTCTTTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QPLCSQMGQGEEWFSASLSWATS*MTSFLM Trigger: CATGAGGAAAGAGGTCATGCAGGAAGTGGCCCAGCT...CAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | CAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGCTCCTGGTCAATGGGTaGAGGCTTCACAAACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: QPLCSQMGQGEEWFSASLLLVNG*RLHKRD Trigger: ATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAG...CAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR GCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCTCCTGGTCAATGGGTaGAGGCTTCACAAACGGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSLLVNG*RLHKRD Trigger: ATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAG...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGAGTTCTTCATCAAACTaGCTGAGCTGGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLSSSSN*LSWATS Trigger: GGAAGTGGCCCAGCTCAGCCAGTTTGATGAAGAACT...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGGGTCGAGCTTCTTACTaGCAGCGTGATTCAAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEEGRASY*QRDSRS Trigger: GCTCCTTGAATCACGCTGCCAGTAAGAAGCTCGACC...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR TCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGCGTCTCTCGAATaGGGGCTGGGTCCCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: PSPEMLYCVASPVISEETPASLE*GLGPLL Trigger: AAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGG...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR TCA 90 bp | ACAGCAGGCAGAAGAGCCTCGGTGTTTCCCCCTTGTAGGCACCCAGTTTTGACAGGAGCCCTGGCGGCATaGACTCCCTCAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRRASVFPPCRHPVLTGALAA*TPSTSL Trigger: CAGAGAAGTTGAGGGAGTTCATGCCGCCAGGGCTCC...TGTCAAAACTGGGTGCCTACAAGGGGGAAACACCGAGGCTCTTCTGCCTGCTGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR GCA 90 bp | GAGACAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTGCCCAAGGCTACAGGAGAGCCGCGATGGGCTaGTCTGAGGTGGCAATCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETRADTGRQNPVCAQGYRRAAMG*SEVAIK Trigger: CTTGATTGCCACCTCAGAGCAGCCCATCGCGGCTCT...CCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTGTCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR GCA 90 bp | TGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGATCATGTTGCTTCTTCTaGTTCTTAGATGGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: WDRVRSGSRPLCPRAGLGSCCFF*FLDGSW Trigger: CCAGGAGCCATCTAAGAAGCAGAAGAAGCAACATGA...TCCCAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGAGTTCTTCATCAAACTaGCTGAGCTGGGCCACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEESSSSN*LSWATS Trigger: GGAAGTGGCCCAGCTCAGCCAGTTTGATGAAGAACT...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGTGGGCTGCTCTGAGGTaGCAATCAAGTATTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLWAALR*QSSISR Trigger: ACGAGAAATACTTGATTGCCACCTCAGAGCAGCCCA...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGGCGGTGCAGAGCCGCGATaGGCTGCTCTGAGGTGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PEMLYCVASPVISEETPGGAEPR*AALRWQ Trigger: TTGCCACCTCAGAGCAGCCCATCGCGGCTCTGCACC...GCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGCTTCTGCTTCTTAGATaGCTCCTGGTCAATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGELLLLR*LLVNGC Trigger: GCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAG...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| 3UTR CAA 72 bp | CGGCCTCTTTGCTTGCTTGGTACTGGGCCAAAGCAGTaGAGGTGGGCTGAGCTGAAGCCCTGTCACAAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: RPLCLLGTGPKQ*RWAELKPCHKQ Trigger: CTGCTTGTGACAGGGCTTCAGCTCAGCCCACCTCAACTGCTTTGGCCCAGTACCAAGCAAGCAAAGAGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | TTGGCAATGAGGCACACATTCTGTGAAGATTACTTGGCCCTCTCTGGGGAAGACCCAGCCCCGGGTCCTTaGAGCGCTTCTCCTGCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAMRHTFCEDYLALSGEDPAPGP*SASPAS Trigger: AGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGG...GTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGGGGAATACTTCTTCCTaGCTGTACAATCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLGNTSS*LYNLPK Trigger: TTTGGGGAGATTGTACAGTCAGGAAGAAGTATTCCC...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCATAGGAGTTGTCATCTaGCTTTTCGCTGCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPIGVVI*LFAAFA Trigger: GGCAAAGGCAGCGAAAAGTCAGATGACAACTCCTAT...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCGGAGCCCTGGCGGCATaGACTCCCTCAACTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPEMLYCVASPVISEETGALAA*TPSTSL Trigger: CAGAGAAGTTGAGGGAGTTCATGCCGCCAGGGCTCC...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCCTTGTTCAAGTTGTCTaGCCGAAATCTGCATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPLVQVV*PKSASS Trigger: CGACGATGCAGATTTCGGGCAGACAACTTGAACAAG...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGCTTCTGCTTCTTAGATaGCTCCTGGTCAATGGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQLLLLR*LLVNGC Trigger: GCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAG...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCCAAACTCCACCTTCTTaGGCGAAAAGAGGGAAGACA | + |
|
Preference number: 4 (lower is better) Translates to: FPQPLCSQMGQGEEWFSAQTPPS*AKRGKT Trigger: TGTCTTCCCTCTTTTCGCCCAAGAAGGTGGAGTTTG...GGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCGGATACAGGAAGGCAGAACCCTGTCTGTGCCCAAGGCTACAGGCGTTTGTCTGCCCGAAATCTaGATCGTCGCCACTCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: QERIQEGRTLSVPKATGVCLPEI*IVATHC Trigger: ACAGTGAGTGGCGACGATGCAGATTTCGGGCAGACA...AACGCCTGTAGCCTTGGGCACAGACAGGGTTCTGCCTTCCTGTATCCGCTCTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGCTCGTCGTCTCCCACTaGTTCCTTTTTCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLLVVSH*FLFLHF Trigger: AAAATGAAGAAAAAGGAAGCAGTGGGAGACGACGAG...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGGCGAAGGGGGTGTAGATTaGAGTGTAGCCCCGACTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLYCVASPVISEETPGEGGVD*SVAPTP Trigger: GGGAGTCGGGGCTACACTCCAATCTACACCCCCTTC...GCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | ACAGCAGGCAGAAGAGCCTCGGTGTTTCCCCCTTGTAGGCACCCAGTTTTGACATCAAACTGGCTGAGCTaGGCCACTTCCTGCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: TAGRRASVFPPCRHPVLTSNWLS*ATSCMT Trigger: GGTCATGCAGGAAGTGGCCCAGCTCAGCCAGTTTGA...TGTCAAAACTGGGTGCCTACAAGGGGGAAACACCGAGGCTCTTCTGCCTGCTGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | TTGGCAATGAGGCACACATTCTGTGAAGATTACTTGGCCCTCTCTGGGGAAGACAGAGGCCAGCGTACTTaGTGGGCAGATCCTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LAMRHTFCEDYLALSGEDRGQRT*WADPLA Trigger: GGCCAGAGGATCTGCCCATCAAGTACGCTGGCCTCT...GTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTCAATCTTCTCAAACTaGTGGACTCGGAAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEESIFSN*WTRKIP Trigger: TGGTATCTTCCGAGTCCATCAGTTTGAGAAGATTGA...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGTCAATCTTCTCAAACTaGTGGACTCGGAAGATACCA | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGESIFSN*WTRKIP Trigger: TGGTATCTTCCGAGTCCATCAGTTTGAGAAGATTGA...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | AGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTATTGTCATGGGGCGATaGGTACACAAACTGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRCAVRWDRVRSGSRPLCIVMGR*VHKLLN Trigger: ATTGAGCAGTTTGTGTACTCATCGCCCCATGACAAT...ACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | GTCAGCTACCACACTCAGCCTTCTCTCTGCGAGAAGCCCTTCCTAGGGAATGTATCGCCACTCACTGTCTaGTTTCACCAGCTGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VSYHTQPSLCEKPFLGNVSPLTV*FHQLVH Trigger: GTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGA...TACATTCCCTAGGAAGGGCTTCTCGCAGAGAGAAGGCTGAGTGTGGTAGCTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCTCGTCGTCTCCCACTaGTTCCTTTTTCTTCATTTT | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSLVVSH*FLFLHF Trigger: AAAATGAAGAAAAAGGAAGCAGTGGGAGACGACGAG...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | TTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCCATCTGACTTTTCGCTaGCTTTGCCAATCACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: FPQPLCSQMGQGEEWFSAHLTFR*LCQSPY Trigger: ATAAGGTGATTGGCAAAGGCAGCGAAAAGTCAGATG...GGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGCATCTGACTTTTCGCTaGCTTTGCCAATCACCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEEHLTFR*LCQSPY Trigger: ATAAGGTGATTGGCAAAGGCAGCGAAAAGTCAGATG...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGATCATCTTCTTGGTCTaGCCATATCGGATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQIIFLV*PYRILR Trigger: CCTGAGAATCCGATATGGGCAGACCAAGAAGATGAT...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCTCTCTGGCACAGCGATaGCCTTCTCTGCCTGGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSPEMLYCVASPVISEETSLAQR*PSLPGS Trigger: ACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGA...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGGCTCAAACTGGCTGAGCTaGGCCACTTCCTGCATGACC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLYCVASPVISEETPGSNWLS*ATSCMT Trigger: GGTCATGCAGGAAGTGGCCCAGCTCAGCCAGTTTGA...GCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGCACGACTTATTGTCATaGGGCGATGAGTACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQHDLLS*GDEYTN Trigger: GTTTGTGTACTCATCGCCCCATGACAATAAGTCGTG...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | AGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTTGTCCATCATCTTCTTaGTCTGCCCATATCGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: SRCAVRWDRVRSGSRPLCCPSSS*SAHIGF Trigger: GAATCCGATATGGGCAGACCAAGAAGATGATGGACA...ACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCGTAGCATTAAGCATATaGACAAACTCCACCTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PLCSQMGQGEEWFSASLSVALSI*TNSTLS Trigger: GGACAAGGTGGAGTTTGTCCATATGCTTAATGCTAC...GGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTTCCATGCTCTGCAGCTaGTTCTCCAGGGGGACCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SPEMLYCVASPVISEETPSMLCS*FSRGTS Trigger: AGAGGTCCCCCTGGAGAACCAGCTGCAGAGCATGGA...AGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR TCA 90 bp | GTGCCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGCGCGATGGGCTGCTCTaGGGTGGCAATCAAGTATTT | + |
|
Preference number: 4 (lower is better) Translates to: VPSPEMLYCVASPVISEERDGLL*GGNQVF Trigger: AAATACTTGATTGCCACCTCAGAGCAGCCCATCGCG...CTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGTGATTCAAGGAGCCTaGGACAATATTCACAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQVIQGA*DNIHNV Trigger: CACATTGTGAATATTGTCTCAGGCTCCTTGAATCAC...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCCCAAGGTACGCAGTaGATATTGGATAAGCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: PSPEMLYCVASPVISEETPQGTQ*ILDKRL Trigger: CAGGCGCTTATCCAATATGCACTGCGTACCTTGGGG...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | CAGATGTGGGGAGAAATGACTGACTGCTCAGGGTGTCTAGAGTCCAAGAGCAGGAGCTGGGCCACTTCCTaGATGACCTCTTTCCTCATG | + |
|
Preference number: 4 (lower is better) Translates to: QMWGEMTDCSGCLESKSRSWATS*MTSFLM Trigger: CATGAGGAAAGAGGTCATGCAGGAAGTGGCCCAGCT...CCTGCTCTTGGACTCTAGACACCCTGAGCAGTCAGTCATTTCTCCCCACATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | CCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGGCAGCGATGCCCTTCTCTaGCTGGTAGTTCTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: PEMLYCVASPVISEETPGSDALL*LVVLQD Trigger: ATCCTGGAGAACTACCAGGCAGAGAAGGGCATCGCT...GCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGGTAGCATTAAGCATATaGACAAACTCCACCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: HGRWFPQPLCSQMGQGEEVALSI*TNSTFL Trigger: CAAGAAGGTGGAGTTTGTCCATATGCTTAATGCTAC...CTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
||
| 3UTR CAA 72 bp | AGAGCCTCGGTGTTTCCCCCTTGTAGGCACCCAGTTTaGACAGGCTTACCAAGAGCAAGGTTAACCAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: RASVFPPCRHPV*TGLPRARLTNS Trigger: GGAGTTGGTTAACCTTGCTCTTGGTAAGCCTGTCAAAACTGGGTGCCTACAAGGGGGAAACACCGAGGCTCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | CTTATCTGGGAGAGCAGTTCAGGCCCAGGGAGACCCAGCAGAGACAAGGTTCAAATAGGAGTTGTCATCTaGCTTTTCGCTGCCTTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LIWESSSGPGRPSRDKVQIGVVI*LFAAFA Trigger: GGCAAAGGCAGCGAAAAGTCAGATGACAACTCCTAT...TTGAACCTTGTCTCTGCTGGGTCTCCCTGGGCCTGAACTGCTCTCCCAGATAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | TTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTACTTTTCGCTGCCTTTaGCAATCACCTTATAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: FPSRCAVRWDRVRSGSRPTFRCL*QSPYKV Trigger: AACTTTATAAGGTGATTGGCAAAGGCAGCGAAAAGT...AGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGACTTTTCGCTGCCTTTaGCAATCACCTTATAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: VHGRWFPQPLCSQMGQGETFRCL*QSPYKV Trigger: AACTTTATAAGGTGATTGGCAAAGGCAGCGAAAAGT...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | TCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTAGCGATGCCCTTCTCTaGCTGGTAGTTCTCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPEMLYCVASPVISEETPSDALL*LVVLQD Trigger: ATCCTGGAGAACTACCAGGCAGAGAAGGGCATCGCT...AGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR GCA 90 bp | TGCTCTGTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGCTTTCGCTTTCTTTTTaGTGCCTTCATGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CSVHGRWFPQPLCSQMGQLSLSF*CLHVAS Trigger: AGAAGCAACATGAAGGCAGCAAAAAGAAAGCGAAAG...CTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGACAGAGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTATGGCTCCTGGTCAATaGGTGCAGGCTTCACAAACG | + |
|
Preference number: 4 (lower is better) Translates to: SPEMLYCVASPVISEETPMAPGQ*VQASQT Trigger: CGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCAT...AGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCTCCCCATCACACTTCTaGATGGCTTCATCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSPEMLYCVASPVISEETSPSHF*MASSMR Trigger: CCTCATTGATGAAGCCATCCAGAAGTGTGATGGGGA...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | TTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTTGCTTGGTACTGGTAGTTCTCCAGGATaGCGCAGATGGTCCGGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTNSLEEISTRPLCLLGTGSSPG*RRWSGW Trigger: CCACCCGGACCATCTGCGCCATCCTGGAGAACTACC...AGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | ACAGCAGGCAGAAGAGCCTCGGTGTTTCCCCCTTGTAGGCACCCAGTTTTGACAGTGATTCAAGGAGCCTaGGACAATATTCACAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: TAGRRASVFPPCRHPVLTVIQGA*DNIHNV Trigger: CACATTGTGAATATTGTCTCAGGCTCCTTGAATCAC...TGTCAAAACTGGGTGCCTACAAGGGGGAAACACCGAGGCTCTTCTGCCTGCTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | CCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTGGCCACGACTTATTGTCATaGGGCGATGAGTACACAAAC | + |
|
Preference number: 4 (lower is better) Translates to: PEMLYCVASPVISEETPGHDLLS*GDEYTN Trigger: GTTTGTGTACTCATCGCCCCATGACAATAAGTCGTG...GCCAGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
||
| CDS-3UTR CCA 90 bp | GTGCCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGTGTCCATCATCTTCTTaGTCTGCCCATATCGGATTC | + |
|
Preference number: 4 (lower is better) Translates to: VPSPEMLYCVASPVISEECPSSS*SAHIGF Trigger: GAATCCGATATGGGCAGACCAAGAAGATGATGGACA...CTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| 3UTR CAA 72 bp | AACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTaGCTTGCTTGGTACTGGGCCAAAGCAGTTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NQLPRRNKHTAS*LAWYWAKAVEV Trigger: CACCTCAACTGCTTTGGCCCAGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | TTTCCCCCTTGTAGGCACCCAGTTTTGACAGGCTTACCAAGAGCAAGGTTAACCTCCCCATCACACTTCTaGATGGCTTCATCAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: FPPCRHPVLTGLPRARLTSPSHF*MASSMR Trigger: CCTCATTGATGAAGCCATCCAGAAGTGTGATGGGGA...GGTTAACCTTGCTCTTGGTAAGCCTGTCAAAACTGGGTGCCTACAAGGGGGAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | TTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTTGCTTGGTACTTTGAAGCGCTTCTCCTaGGTCTCTCGAATGAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSLEEISTRPLCLLGTLKRFS*VSRMRA Trigger: AGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAA...AGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR GCA 90 bp | TTGGCAATGAGGCACACATTCTGTGAAGATTACTTGGCCCTCTCTGGGGAAGACATCATCTTCTTGGTCTaGCCATATCGGATTCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LAMRHTFCEDYLALSGEDIIFLV*PYRILR Trigger: CCTGAGAATCCGATATGGGCAGACCAAGAAGATGAT...GTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGTGGGCTGCTCTGAGGTaGCAATCAAGTATTTCTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKVNQLPRRNKHTASLWAALR*QSSISR Trigger: ACGAGAAATACTTGATTGCCACCTCAGAGCAGCCCA...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGGGGAATACTTCTTCCTaGCTGTACAATCTCCCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: TKSKVNQLPRRNKHTASLGNTSS*LYNLPK Trigger: TTTGGGGAGATTGTACAGTCAGGAAGAAGTATTCCC...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR TCA 90 bp | ACCAAGAGCAAGGTTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGATTGTCATGGGGCGATaGGTACACAAACTGCTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: TKSKVNQLPRRNKHTASLIVMGR*VHKLLN Trigger: ATTGAGCAGTTTGTGTACTCATCGCCCCATGACAAT...CAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAACCTTGCTCTTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
||
| CDS-3UTR CCA 90 bp | CATAATGTAAATATTTTGGGAAAAGGGTTTGTCAAGGAGGTCACGACTCACAGGATGGCTCCTGGTCAATaGGTGCAGGCTTCACAAACG | + |
|
Preference number: 4 (lower is better) Translates to: HNVNILGKGFVKEVTTHRMAPGQ*VQASQT Trigger: CGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCAT...CCTGTGAGTCGTGACCTCCTTGACAAACCCTTTTCCCAAAATATTTACATTATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR GCA 90 bp | TTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTTGCTTGGTACTCTTTCGCTTTCTTTTTaGTGCCTTCATGTTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LTNSLEEISTRPLCLLGTLSLSF*CLHVAS Trigger: AGAAGCAACATGAAGGCAGCAAAAAGAAAGCGAAAG...AGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| 3UTR CAA 72 bp | AACTTTACAGAGAATCCCAATCCTTGTCCTGACAACTaGTGTTACAACTCCAGGCTTTCTAAAAAGCCTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NFTENPNPCPDN*CYNSRLSKKPL Trigger: TAAAGGCTTTTTAGAAAGCCTGGAGTTGTAACACAAGTTGTCAGGACAAGGATTGGGATTCTCTGTAAAGTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS TCA 90 bp | GCGAGCCCACTTCCTGACGAAAGCAGGTGGAGAGGCCAGCGTACTTaGTGGGCAGATCCTCTGGCCGCAGCCACTCGTCCCGGTGCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: ASPLPDESRWRGQRT*WADPLAAATRPGAE Trigger: CTCTGCACCGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATCAAGTACGCTGGCCTCTCCACCTGCTTTCGTCAGGAAGTGGGCTCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS-3UTR CAA 90 bp | TTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTACCAGCCCCGGGTCCTaGAAGCGCTTCTCCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSRCAVRWDRVRSGSRPTSPGS*KRFSCV Trigger: GACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGT...AGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS GCA 90 bp | TTCACCAGCTGGTCCACCAGCCCCGGGTCCTTGAAGCGCTTCTCCTaGGTCTCTCGAATGAGGGCTGGGTCCCCTCCTTTATCCACCCGA | + |
|
Preference number: 5 (lower is better) Translates to: FTSWSTSPGSLKRFS*VSRMRAGSPPLSTR Trigger: TCGGGTGGATAAAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS GCA 90 bp | GCGTACTTGATGGGCAGATCCTCTGGCCGCAGCCACTCGTCCCGGTaGAGAGCCGCGATGGGCTGCTCTGAGGTGGCAATCAAGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: AYLMGRSSGRSHSSR*RAAMGCSEVAIKYF Trigger: GAAATACTTGATTGCCACCTCAGAGCAGCCCATCGCGGCTCTGCACCGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATCAAGTACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CCA 90 bp | GCCCGAAATCTGCATCGTCGCCACTCACTGTCTGCTTTCACCAGCTaGTCCACCAGCCCCGGGTCCTTGAAGCGCTTCTCCTGCGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: ARNLHRRHSLSAFTS*STSPGSLKRFSCVS Trigger: AGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGACGATGCAGATTTCGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS-3UTR CAA 90 bp | CGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGAAGGGGGTGTAGATaGGAGTGTAGCCCCGACTCC | + |
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Preference number: 5 (lower is better) Translates to: RCAVRWDRVRSGSRPLCPRRGCR*ECSPDS Trigger: GGAGTCGGGGCTACACTCCAATCTACACCCCCTTCT...GGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS TCA 90 bp | ACTCGGAAGATACCACGGGTGTCACGGCCATGCGAGCCCACTTCCTaGCGAAAGCAGGTGGAGAGGCCAGCGTACTTGATGGGCAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: TRKIPRVSRPCEPTS*RKQVERPAYLMGRS Trigger: GGATCTGCCCATCAAGTACGCTGGCCTCTCCACCTGCTTTCGTCAGGAAGTGGGCTCGCATGGCCGTGACACCCGTGGTATCTTCCGAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS GCA 90 bp | CGGCATGAACTCCCTCAACTTCTCTGGCACAGCGATGCCCTTCTCTaGCTGGTAGTTCTCCAGGATGGCGCAGATGGTCCGGGTGGTAGC | + |
|
Preference number: 5 (lower is better) Translates to: RHELPQLLWHSDALL*LVVLQDGADGPGGS Trigger: GCTACCACCCGGACCATCTGCGCCATCCTGGAGAACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAGTTCATGCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 90 bp | CCCCGGGTCCTTGAAGCGCTTCTCCTGCGTCTCTCGAATGAGGGCTaGGTCCCCTCCTTTATCCACCCGAAACAAATCCAGGTCCAGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PRVLEALLLRLSNEG*VPSFIHPKQIQVQH Trigger: GTGCTGGACCTGGATTTGTTTCGGGTGGATAAAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CCA 90 bp | GCAGATCCTCTGGCCGCAGCCACTCGTCCCGGTGCAGAGCCGCGATaGGCTGCTCTGAGGTGGCAATCAAGTATTTCTCGTCATAGGAGT | + |
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Preference number: 5 (lower is better) Translates to: ADPLAAATRPGAEPR*AALRWQSSISRHRS Trigger: ACTCCTATGACGAGAAATACTTGATTGCCACCTCAGAGCAGCCCATCGCGGCTCTGCACCGGGACGAGTGGCTGCGGCCAGAGGATCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS-3UTR CAA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGGTACGCAGTGCATATaGGATAAGCGCCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: VHGRWFPQPLCSQMGQGEGTQCI*DKRLLQ Trigger: CTGGAGCAGGCGCTTATCCAATATGCACTGCGTACC...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | CCACGGAGCCTGCCTGGGCAGCCAGCTGCCACAGCAGGCAGAAGAGCCTCGGTGTTGTCCATCATCTTCTaGGTCTGCCCATATCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: PRSLPGQPAATAGRRASVLSIIF*VCPYRI Trigger: AATCCGATATGGGCAGACCAAGAAGATGATGGACAA...CACCGAGGCTCTTCTGCCTGCTGTGGCAGCTGGCTGCCCAGGCAGGCTCCGTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS CCA 90 bp | GATCAGCTCTTGGAGCCCTGGCGGCATGAACTCCCTCAACTTCTCTaGCACAGCGATGCCCTTCTCTGCCTGGTAGTTCTCCAGGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: DQLLEPWRHELPQLL*HSDALLCLVVLQDG Trigger: GCCATCCTGGAGAACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAGTTCATGCCGCCAGGGCTCCAAGAGCTGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | CCCTCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCACCAGCCCCGGGTCCTaGAAGCGCTTCTCCTGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: PSPEMLYCVASPVISEETTSPGS*KRFSCV Trigger: GACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGT...GGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGTCTCAGGCGGCGAGCTaGGTAATCCGTGCAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: VHGRWFPQPLCSQMGQGESQAAS*VIRAIR Trigger: TCTAATTGCACGGATTACCAAGCTCGCCGCCTGAGA...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS GCA 90 bp | GTTCAAGTTGTCTGCCCGAAATCTGCATCGTCGCCACTCACTGTCTaGTTTCACCAGCTGGTCCACCAGCCCCGGGTCCTTGAAGCGCTT | + |
|
Preference number: 5 (lower is better) Translates to: VQVVCPKSASSPLTV*FHQLVHQPRVLEAL Trigger: AAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGACGATGCAGATTTCGGGCAGACAACTTGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS GCA 90 bp | GGGGTGCAGAAGGTTCCCAATCTCGCGGAGGTTCTCAAATCGCTCTaGTTCCAGCTTTACCCGCTCCCCATCACACTTCTGGATGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVQKVPNLAEVLKSL*FQLYPLPITLLDGF Trigger: GAAGCCATCCAGAAGTGTGATGGGGAGCGGGTAAAGCTGGAAGCAGAGCGATTTGAGAACCTCCGCGAGATTGGGAACCTTCTGCACCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS-3UTR CAA 90 bp | AGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTCCCAGGGCAGGCCTGTTCAGCTTGTTCAAGTaGTCTGCCCGAAATCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: RWDRVRSGSRPLCPRAGLFSLFK*SARNLH Trigger: ATGCAGATTTCGGGCAGACAACTTGAACAAGCTGAA...CAGGCCTGCCCTGGGACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | TTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTTGGACAAACTCCACCTaGTCCATCATCTTCTTGGTC | + |
|
Preference number: 5 (lower is better) Translates to: FPSRCAVRWDRVRSGSRPWTNST*SIIFLV Trigger: GACCAAGAAGATGATGGACAAGGTGGAGTTTGTCCA...AGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR CAA 90 bp | GTCCACGGCAGATGGTTTCCCCAGCCGCTGTGCAGTCAGATGGGACAGGGTGAGTTGTCCATCATCTTCTaGGTCTGCCCATATCGGATT | + |
|
Preference number: 5 (lower is better) Translates to: VHGRWFPQPLCSQMGQGELSIIF*VCPYRI Trigger: AATCCGATATGGGCAGACCAAGAAGATGATGGACAA...CTCACCCTGTCCCATCTGACTGCACAGCGGCTGGGGAAACCATCTGCCGTGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | AGCCGCTGTGCAGTCAGATGGGACAGGGTGAGGAGTGGTTCTCGGCCTCTCTGTGACATTGCCTTCAACTaGTTCTGTGTAGAGAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: SRCAVRWDRVRSGSRPLCDIAFN*FCVEKR Trigger: CCGTTTCTCTACACAGAACAAGTTGAAGGCAATGTC...ACAGAGAGGCCGAGAACCACTCCTCACCCTGTCCCATCTGACTGCACAGCGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
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| CDS GCA 90 bp | TTCATGTTGCTTCTTCTGCTTCTTAGATGGCTCCTGGTCAATGGGTaGAGGCTTCACAAACGGGATCAGCTCTTGGAGCCCTGGCGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: FMLLLLLLRWLLVNG*RLHKRDQLLEPWRH Trigger: ATGCCGCCAGGGCTCCAAGAGCTGATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAGAAGCAACATGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | TTGGCAATGAGGCACACATTCTGTGAAGATTACTTGGCCCTCTCTGGGGAAGACAGAAGGGGGTGTAGATaGGAGTGTAGCCCCGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAMRHTFCEDYLALSGEDRRGCR*ECSPDS Trigger: GGAGTCGGGGCTACACTCCAATCTACACCCCCTTCT...GTCTTCCCCAGAGAGGGCCAAGTAATCTTCACAGAATGTGTGCCTCATTGCCAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS GCA 90 bp | CTGCCTTTGCCAATCACCTCATCATTACTAATGGGCACAGAGGGGTaGAGAAGGTTCCCAATCTCGCGGAGGTTCTCAAATCGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: LPLPITSSLLMGTEG*RRFPISRRFSNRSA Trigger: AGCAGAGCGATTTGAGAACCTCCGCGAGATTGGGAACCTTCTGCACCCCTCTGTGCCCATTAGTAATGATGAGGTGATTGGCAAAGGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000153499.2 |
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| CDS-3UTR CAA 90 bp | CTCTGTAATCATTCTCAAAGAAGCCTTATCTGGGAGAGCAGTTCAGGCCCAGGGGGTACGCAGTGCATATaGGATAAGCGCCTGCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: LCNHSQRSLIWESSSGPGGTQCI*DKRLLQ Trigger: CTGGAGCAGGCGCTTATCCAATATGCACTGCGTACC...CCCTGGGCCTGAACTGCTCTCCCAGATAAGGCTTCTTTGAGAATGATTACAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS-3UTR CAA 90 bp | TCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTTCTCAGGCGGCGAGCTaGGTAATCCGTGCAATTAGA | + |
|
Preference number: 5 (lower is better) Translates to: SPEMLYCVASPVISEETPSQAAS*VIRAIR Trigger: TCTAATTGCACGGATTACCAAGCTCGCCGCCTGAGA...AGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS GCA 90 bp | ACTTTGTTGTCTGCGTCCTCATCATTACTAATGGGCACAGAGGGGTaGAGAAGGTTCCCAATCTCGCGGAGGTTCTCAAATCGCTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: TLLSASSSLLMGTEG*RRFPISRRFSNRSA Trigger: AGCAGAGCGATTTGAGAACCTCCGCGAGATTGGGAACCTTCTGCACCCCTCTGTGCCCATTAGTAATGATGAGGACGCAGACAACAAAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 90 bp | GCGCAGATGGTCCGGGTGGTAGCACACATTGTAGCATTAAGCATATaGACAAACTCCACCTTCTTGGGCGAAAAGAGGGAAGACATTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AQMVRVVAHIVALSI*TNSTFLGEKREDIA Trigger: GGCAATGTCTTCCCTCTTTTCGCCCAAGAAGGTGGAGTTTGTCCATATGCTTAATGCTACAATGTGTGCTACCACCCGGACCATCTGCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
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| CDS CCA 90 bp | TTTTTGCTGCCTTCATGTTGCTTCTTCTGCTTCTTAGATGGCTCCTaGTCAATGGGTGCAGGCTTCACAAACGGGATCAGCTCTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FLLPSCCFFCFLDGS*SMGAGFTNGISSWS Trigger: GCTCCAAGAGCTGATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAGAAGCAACATGAAGGCAGCAAAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS-3UTR CAA 90 bp | TCCCCAGAGATGCTTTATTGCGTGGCTTCACCAGTCATCAGTGAAGAGACCCCTTTCAGCTTGTTCAAGTaGTCTGCCCGAAATCTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SPEMLYCVASPVISEETPFSLFK*SARNLH Trigger: ATGCAGATTTCGGGCAGACAACTTGAACAAGCTGAA...AGGGGTCTCTTCACTGATGACTGGTGAAGCCACGCAATAAAGCATCTCTGGGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 90 bp | CAATGTGGTAAGGGATCCCCAAAGACTGGTAGAATTCTTCTGCGGTaGCGATCATCTCATCAAACATCTCCCACGACTTATTGTCATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QCGKGSPKTGRILLR*RSSHQTSPTTYCHG Trigger: CCCATGACAATAAGTCGTGGGAGATGTTTGATGAGATGATCGCCACCGCAGAAGAATTCTACCAGTCTTTGGGGATCCCTTACCACATTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS GCA 90 bp | ATTCACAATGTGGTAAGGGATCCCCAAAGACTGGTAGAATTCTTCTaGGGTGGCGATCATCTCATCAAACATCTCCCACGACTTATTGTC | + |
|
Preference number: 5 (lower is better) Translates to: IHNVVRDPQRLVEFF*GGDHLIKHLPRLIV Trigger: GACAATAAGTCGTGGGAGATGTTTGATGAGATGATCGCCACCGCAGAAGAATTCTACCAGTCTTTGGGGATCCCTTACCACATTGTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS TCA 90 bp | GATCATCTCATCAAACATCTCCCACGACTTATTGTCATGGGGCGATaGGTACACAAACTGCTCAATCTTCTCAAACTGATGGACTCGGAA | + |
|
Preference number: 5 (lower is better) Translates to: DHLIKHLPRLIVMGR*VHKLLNLLKLMDSE Trigger: TTCCGAGTCCATCAGTTTGAGAAGATTGAGCAGTTTGTGTACTCATCGCCCCATGACAATAAGTCGTGGGAGATGTTTGATGAGATGATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS-3UTR CAA 90 bp | TTAACCAACTCCCTAGAAGAAATAAGCACACGGCCTCTTTGCTTGCTTGGTACTCATAAATTCTTCAGCTaGTTCAAGTTGTCTGCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: LTNSLEEISTRPLCLLGTHKFFS*FKLSAR Trigger: TCGGGCAGACAACTTGAACAAGCTGAAGAATTTATG...AGTACCAAGCAAGCAAAGAGGCCGTGTGCTTATTTCTTCTAGGGAGTTGGTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS GCA 72 bp | ATGGGCAGATCCTCTGGCCGCAGCCACTCGTCCCGGTaGAGAGCCGCGATGGGCTGCTCTGAGGTGGCAATC | + |
|
Preference number: 6 (lower is better) Translates to: MGRSSGRSHSSR*RAAMGCSEVAI Trigger: GATTGCCACCTCAGAGCAGCCCATCGCGGCTCTGCACCGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CCA 72 bp | GGTGGAGAGGCCAGCGTACTTGATGGGCAGATCCTCTaGCCGCAGCCACTCGTCCCGGTGCAGAGCCGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: GGEASVLDGQIL*PQPLVPVQSRD Trigger: ATCGCGGCTCTGCACCGGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATCAAGTACGCTGGCCTCTCCACC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 90 bp | CACTCACTGTCTGCTTTCACCAGCTGGTCCACCAGCCCCGGGTCCTaGAAGCGCTTCTCCTGCGTCTCTCGAATGAGGGCTGGGTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: HSLSAFTSWSTSPGS*KRFSCVSRMRAGSP Trigger: AGGGGACCCAGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGACAGTGAGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS TCA 72 bp | CTTCCTGACGAAAGCAGGTGGAGAGGCCAGCGTACTTaGTGGGCAGATCCTCTGGCCGCAGCCACTCGTCCC | + |
|
Preference number: 6 (lower is better) Translates to: LPDESRWRGQRT*WADPLAAATRP Trigger: GGGACGAGTGGCTGCGGCCAGAGGATCTGCCCATCAAGTACGCTGGCCTCTCCACCTGCTTTCGTCAGGAAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS GCA 72 bp | TGGTCCACCAGCCCCGGGTCCTTGAAGCGCTTCTCCTaGGTCTCTCGAATGAGGGCTGGGTCCCCTCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: WSTSPGSLKRFS*VSRMRAGSPPL Trigger: TAAAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CCA 72 bp | CTGCATCGTCGCCACTCACTGTCTGCTTTCACCAGCTaGTCCACCAGCCCCGGGTCCTTGAAGCGCTTCTCC | + |
|
Preference number: 6 (lower is better) Translates to: LHRRHSLSAFTS*STSPGSLKRFS Trigger: GGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGACGATGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS GCA 72 bp | GTCTGCCCGAAATCTGCATCGTCGCCACTCACTGTCTaGTTTCACCAGCTGGTCCACCAGCCCCGGGTCCTT | + |
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Preference number: 6 (lower is better) Translates to: VCPKSASSPLTV*FHQLVHQPRVL Trigger: AAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGACAGTGAGTGGCGACGATGCAGATTTCGGGCAGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CAA 72 bp | TCTGCTTTCACCAGCTGGTCCACCAGCCCCGGGTCCTaGAAGCGCTTCTCCTGCGTCTCTCGAATGAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: SAFTSWSTSPGS*KRFSCVSRMRA Trigger: AGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAGGACCCGGGGCTGGTGGACCAGCTGGTGAAAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS TCA 72 bp | ATACCACGGGTGTCACGGCCATGCGAGCCCACTTCCTaGCGAAAGCAGGTGGAGAGGCCAGCGTACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: IPRVSRPCEPTS*RKQVERPAYLM Trigger: CATCAAGTACGCTGGCCTCTCCACCTGCTTTCGTCAGGAAGTGGGCTCGCATGGCCGTGACACCCGTGGTAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS GCA 72 bp | CTCCCTCAACTTCTCTGGCACAGCGATGCCCTTCTCTaGCTGGTAGTTCTCCAGGATGGCGCAGATGGTCCG | + |
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Preference number: 6 (lower is better) Translates to: LPQLLWHSDALL*LVVLQDGADGP Trigger: CGGACCATCTGCGCCATCCTGGAGAACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS TCA 72 bp | TCACAAACGGGATCAGCTCTTGGAGCCCTGGCGGCATaGACTCCCTCAACTTCTCTGGCACAGCGATGCCCT | + |
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Preference number: 6 (lower is better) Translates to: SQTGSALGALAA*TPSTSLAQRCP Trigger: AGGGCATCGCTGTGCCAGAGAAGTTGAGGGAGTTCATGCCGCCAGGGCTCCAAGAGCTGATCCCGTTTGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 72 bp | TTGGAGCCCTGGCGGCATGAACTCCCTCAACTTCTCTaGCACAGCGATGCCCTTCTCTGCCTGGTAGTTCTC | + |
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Preference number: 6 (lower is better) Translates to: LEPWRHELPQLL*HSDALLCLVVL Trigger: GAGAACTACCAGGCAGAGAAGGGCATCGCTGTGCCAGAGAAGTTGAGGGAGTTCATGCCGCCAGGGCTCCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS GCA 72 bp | GATTGGAGTGTAGCCCCGACTCCCCAAGGTACGCAGTaGATATTGGATAAGCGCCTGCTCCAGGAACACCAG | + |
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Preference number: 6 (lower is better) Translates to: DWSVAPTPQGTQ*ILDKRLLQEHQ Trigger: CTGGTGTTCCTGGAGCAGGCGCTTATCCAATATGCACTGCGTACCTTGGGGAGTCGGGGCTACACTCCAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS TCA 72 bp | TCTGTGAGACTTTCAGGGCAGCTAGCGCGTCTGCAGTaGGGTCATCGAAATTCAGCACGTTCTCTGGGACGG | + |
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Preference number: 6 (lower is better) Translates to: SVRLSGQLARLQ*GHRNSARSLGR Trigger: CCGTCCCAGAGAACGTGCTGAATTTCGATGACCTCACTGCAGACGCGCTAGCTGCCCTGAAAGTCTCACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CCA 72 bp | CTTGAAGCGCTTCTCCTGCGTCTCTCGAATGAGGGCTaGGTCCCCTCCTTTATCCACCCGAAACAAATCCAG | + |
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Preference number: 6 (lower is better) Translates to: LEALLLRLSNEG*VPSFIHPKQIQ Trigger: CTGGATTTGTTTCGGGTGGATAAAGGAGGGGACCCAGCCCTCATTCGAGAGACGCAGGAGAAGCGCTTCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS GCA 72 bp | CTTCTTCTGCTTCTTAGATGGCTCCTGGTCAATGGGTaGAGGCTTCACAAACGGGATCAGCTCTTGGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: LLLLLRWLLVNG*RLHKRDQLLEP Trigger: GGGCTCCAAGAGCTGATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 72 bp | AGCCTGGGAACCAGGCCTCCAGGTCGAGCTTCTTACTaGCAGCGTGATTCAAGGAGCCTGAGACAATATTCA | + |
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Preference number: 6 (lower is better) Translates to: SLGTRPPGRASY*QRDSRSLRQYS Trigger: TGAATATTGTCTCAGGCTCCTTGAATCACGCTGCCAGTAAGAAGCTCGACCTGGAGGCCTGGTTCCCAGGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CCA 72 bp | GTCTGCAGTGAGGTCATCGAAATTCAGCACGTTCTCTaGGACGGACTCGTCGTCTCCCACTGCTTCCTTTTT | + |
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Preference number: 6 (lower is better) Translates to: VCSEVIEIQHVL*DGLVVSHCFLF Trigger: AAAAAGGAAGCAGTGGGAGACGACGAGTCCGTCCCAGAGAACGTGCTGAATTTCGATGACCTCACTGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CAA 72 bp | CTTGGTCTGCCCATATCGGATTCTCAGGCGGCGAGCTaGGTAATCCGTGCAATTAGAACAGGACACCAACTC | + |
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Preference number: 6 (lower is better) Translates to: LGLPISDSQAAS*VIRAIRTGHQL Trigger: GAGTTGGTGTCCTGTTCTAATTGCACGGATTACCAAGCTCGCCGCCTGAGAATCCGATATGGGCAGACCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CAA 90 bp | CATCATCTTCTTGGTCTGCCCATATCGGATTCTCAGGCGGCGAGCTaGGTAATCCGTGCAATTAGAACAGGACACCAACTCACGGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: HHLLGLPISDSQAAS*VIRAIRTGHQLTEG Trigger: GCCTTCCGTGAGTTGGTGTCCTGTTCTAATTGCACGGATTACCAAGCTCGCCGCCTGAGAATCCGATATGGGCAGACCAAGAAGATGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CAA 90 bp | GTTCTCCAGGGGGACCTCTTTCGCTTTCTTTTTGCTGCCTTCATGTaGCTTCTTCTGCTTCTTAGATGGCTCCTGGTCAATGGGTGCAGG | + |
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Preference number: 6 (lower is better) Translates to: VLQGDLFRFLFAAFM*LLLLLRWLLVNGCR Trigger: CCTGCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAGAAGCAACATGAAGGCAGCAAAAAGAAAGCGAAAGAGGTCCCCCTGGAGAAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS TCA 72 bp | AACCAGGCCTCCAGGTCGAGCTTCTTACTGGCAGCGTaGTTCAAGGAGCCTGAGACAATATTCACAATGTGG | + |
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Preference number: 6 (lower is better) Translates to: NQASRSSFLLAA*FKEPETIFTMW Trigger: CCACATTGTGAATATTGTCTCAGGCTCCTTGAATCACGCTGCCAGTAAGAAGCTCGACCTGGAGGCCTGGTT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CCA 72 bp | GCATATGGACAAACTCCACCTTGTCCATCATCTTCTTaGTCTGCCCATATCGGATTCTCAGGCGGCGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: AYGQTPPCPSSS*SAHIGFSGGEL Trigger: AAGCTCGCCGCCTGAGAATCCGATATGGGCAGACCAAGAAGATGATGGACAAGGTGGAGTTTGTCCATATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS CCA 72 bp | CCTTCATGTTGCTTCTTCTGCTTCTTAGATGGCTCCTaGTCAATGGGTGCAGGCTTCACAAACGGGATCAGC | + |
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Preference number: 6 (lower is better) Translates to: PSCCFFCFLDGS*SMGAGFTNGIS Trigger: GCTGATCCCGTTTGTGAAGCCTGCACCCATTGACCAGGAGCCATCTAAGAAGCAGAAGAAGCAACATGAAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CAA 72 bp | AGCATATGGACAAACTCCACCTTGTCCATCATCTTCTaGGTCTGCCCATATCGGATTCTCAGGCGGCGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SIWTNSTLSIIF*VCPYRILRRRA Trigger: AGCTCGCCGCCTGAGAATCCGATATGGGCAGACCAAGAAGATGATGGACAAGGTGGAGTTTGTCCATATGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000090553.12 |
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| CDS GCA 72 bp | GTGGTAAGGGATCCCCAAAGACTGGTAGAATTCTTCTaGGGTGGCGATCATCTCATCAAACATCTCCCACGA | + |
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Preference number: 6 (lower is better) Translates to: VVRDPQRLVEFF*GGDHLIKHLPR Trigger: TCGTGGGAGATGTTTGATGAGATGATCGCCACCGCAGAAGAATTCTACCAGTCTTTGGGGATCCCTTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 90 bp | TCTTCTGCGGTGGCGATCATCTCATCAAACATCTCCCACGACTTATaGTCATGGGGCGATGAGTACACAAACTGCTCAATCTTCTCAAAC | + |
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Preference number: 6 (lower is better) Translates to: SSAVAIISSNISHDL*SWGDEYTNCSIFSN Trigger: GTTTGAGAAGATTGAGCAGTTTGTGTACTCATCGCCCCATGACAATAAGTCGTGGGAGATGTTTGATGAGATGATCGCCACCGCAGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CCA 72 bp | AAGGGATCCCCAAAGACTGGTAGAATTCTTCTGCGGTaGCGATCATCTCATCAAACATCTCCCACGACTTAT | + |
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Preference number: 6 (lower is better) Translates to: KGSPKTGRILLR*RSSHQTSPTTY Trigger: ATAAGTCGTGGGAGATGTTTGATGAGATGATCGCCACCGCAGAAGAATTCTACCAGTCTTTGGGGATCCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 72 bp | GTGGCGATCATCTCATCAAACATCTCCCACGACTTATaGTCATGGGGCGATGAGTACACAAACTGCTCAATC | + |
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Preference number: 6 (lower is better) Translates to: VAIISSNISHDL*SWGDEYTNCSI Trigger: GATTGAGCAGTTTGTGTACTCATCGCCCCATGACAATAAGTCGTGGGAGATGTTTGATGAGATGATCGCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 90 bp | GAATACTTCTTCCTGACTGTACAATCTCCCCAAATACGTTCTACTTaGTTGTCTGCGTCCTCATCATTACTAATGGGCACAGAGGGGTGC | + |
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Preference number: 6 (lower is better) Translates to: EYFFLTVQSPQIRST*LSASSSLLMGTEGC Trigger: GCACCCCTCTGTGCCCATTAGTAATGATGAGGACGCAGACAACAAAGTAGAACGTATTTGGGGAGATTGTACAGTCAGGAAGAAGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 |
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| CDS CCA 72 bp | AACGGAGATTATTCTTTTTCTTGTCCATCATCTTCTTaGTCTGCCCATATCGGATTCTCAGGCGGCGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: NGDYSFSCPSSS*SAHIGFSGGEL Trigger: AAGCTCGCCGCCTGAGAATCCGATATGGGCAGACCAAGAAGATGATGGACAAGAAAAAGAATAATCTCCGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
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| CDS CAA 72 bp | TTCTCCCCAATAGTTTTGCTGCATAAATTCTTCAGCTaGTTCAAGTTGTCTGCCCGAAATCTGCATCGTCGC | + |
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Preference number: 6 (lower is better) Translates to: FSPIVLLHKFFS*FKLSARNLHRR Trigger: GCGACGATGCAGATTTCGGGCAGACAACTTGAACAAGCTGAAGAATTTATGCAGCAAAACTATTGGGGAGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 ENSMUST00000153499.2 |
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| CDS CCA 72 bp | ATCATCTCATCAAACATCTCCCACGACTTATTGTCATaGGGCGATGAGTACACAAACTGCTCAATCTTCTCA | + |
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Preference number: 6 (lower is better) Translates to: IISSNISHDLLS*GDEYTNCSIFS Trigger: TGAGAAGATTGAGCAGTTTGTGTACTCATCGCCCCATGACAATAAGTCGTGGGAGATGTTTGATGAGATGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 72 bp | ATTGTAGCATTAAGCATATGGACAAACTCCACCTTCTaGGGCGAAAAGAGGGAAGACATTGCCTTCAACTTG | + |
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Preference number: 6 (lower is better) Translates to: IVALSIWTNSTF*GEKREDIAFNL Trigger: CAAGTTGAAGGCAATGTCTTCCCTCTTTTCGCCCAAGAAGGTGGAGTTTGTCCATATGCTTAATGCTACAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
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| CDS TCA 72 bp | GGCAATCAAGTATTTCTCGTCATAGGAGTTGTCATCTaGCTTTTCGCTGCCTTTGCCAATCACCTTATAAAG | + |
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Preference number: 6 (lower is better) Translates to: GNQVFLVIGVVI*LFAAFANHLIK Trigger: CTTTATAAGGTGATTGGCAAAGGCAGCGAAAAGTCAGATGACAACTCCTATGACGAGAAATACTTGATTGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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| CDS CAA 72 bp | TTCTTGGGCGAAAAGAGGGAAGACATTGCCTTCAACTaGTTCTGTGTAGAGAAACGGAGATTATTCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: FLGEKREDIAFN*FCVEKRRLFFF Trigger: GAAAAAGAATAATCTCCGTTTCTCTACACAGAACAAGTTGAAGGCAATGTCTTCCCTCTTTTCGCCCAAGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102625.11 |
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| CDS GCA 72 bp | ATTTCTCGTCATAGGAGTTGTCATCTGACTTTTCGCTaGCTTTGCCAATCACCTTATAAAGTTCTTCATCAA | + |
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Preference number: 6 (lower is better) Translates to: ISRHRSCHLTFR*LCQSPYKVLHQ Trigger: TTGATGAAGAACTTTATAAGGTGATTGGCAAAGGCAGCGAAAAGTCAGATGACAACTCCTATGACGAGAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090553.12 ENSMUST00000102625.11 ENSMUST00000132467.8 |
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