Pregenerated sensors for SAPCD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026955Ensembl transcript IDs: ENSMUST00000028329.13, ENSMUST00000100323.3, ENSMUST00000114293.9
Found 135 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGTaGTCTTCAGTCAGAAGACAGGCTCCCGGCAGTGTCATGGAGCTG | + |
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Preference number: 1 (lower is better) Translates to: LEAAASLRALRSKPW*SSVRRQAPGSVMEL Trigger: CAGCTCCATGACACTGCCGGGAGCCTGTCTTCTGACTGAAGACCACCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR CCA 90 bp | AGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTaGTGGTCTTCAGTCAGAAGACAGGCTCCCGGCAGTGTCATGGAG | + |
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Preference number: 1 (lower is better) Translates to: SLEAAASLRALRSKP*WSSVRRQAPGSVME Trigger: CTCCATGACACTGCCGGGAGCCTGTCTTCTGACTGAAGACCACCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAGACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR CCA 90 bp | GGTAAACGTGAGGATGATCCTCCGCCACCCACTGACAGTGGCAAGTaGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GKREDDPPPPTDSGK*QLPAEYISSSTQVW Trigger: CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGTCAGTGGGTGGCGGAGGATCATCCTCACGTTTACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR TCA 90 bp | GATCAGGACAGACGTAAACATGCCCCCTTCTCTGTAGGGGCTGCCTaGAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCACTGACA | + |
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Preference number: 1 (lower is better) Translates to: DQDRRKHAPFSVGAA*NQVNVRMILRHPLT Trigger: TGTCAGTGGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR GCA 90 bp | GTGCTCCACCAGAACAGGCTAAATAGGTTCTCCTCATCCAATCTGTaGCCACCCAAGCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: VLHQNRLNRFSSSNL*PPKLPMGGISRERV Trigger: GACTCTCTCCCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGGCACAGATTGGATGAGGAGAACCTATTTAGCCTGTTCTGGTGGAGCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 90 bp | TCAGGTCGCTTTGCTGGCCAAACACAATGGGTTCGTATTCCACACTaGAGTCTTCAGGCCACAGAACTCACCTGTGACGACTCAGTGCTC | + |
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Preference number: 1 (lower is better) Translates to: SGRFAGQTQWVRIPH*SLQATELTCDDSVL Trigger: GAGCACTGAGTCGTCACAGGTGAGTTCTGTGGCCTGAAGACTCCAGTGTGGAATACGAACCCATTGTGTTTGGCCAGCAAAGCGACCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 90 bp | GTGGTGGCACACACCTTTAATCCCAGTACCAGAGAGGCAGATCTCTaGGAGTTTGAGACCAGCCTGCTCTACATAGAGAGTGCCAGGACA | + |
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Preference number: 1 (lower is better) Translates to: VVAHTFNPSTREADL*EFETSLLYIESART Trigger: TGTCCTGGCACTCTCTATGTAGAGCAGGCTGGTCTCAAACTCTCAGAGATCTGCCTCTCTGGTACTGGGATTAAAGGTGTGTGCCACCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 90 bp | CAAAGGAGGCTATGGGGATGGAGGGGCAGACCCAACCTGTTGCTATaGAAACCTGTCTCTAGATGGCAAGTCCACCTGGGTAAACTAATC | + |
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Preference number: 1 (lower is better) Translates to: QRRLWGWRGRPNLLL*KPVSRWQVHLGKLI Trigger: GATTAGTTTACCCAGGTGGACTTGCCATCTAGAGACAGGTTTCCATAGCAACAGGTTGGGTCTGCCCCTCCATCCCCATAGCCTCCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 90 bp | TGGGTAAGCCAAGTTATTGGCTTCCTTCTAGGAACCACACTAGCCTaGTCCAGCTGCAGCCAGATTTTCCTTCTCAGCCTGTTACACACA | + |
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Preference number: 1 (lower is better) Translates to: WVSQVIGFLLGTTLA*SSCSQIFLLSLLHT Trigger: TGTGTGTAACAGGCTGAGAAGGAAAATCTGGCTGCAGCTGGACCAGGCTAGTGTGGTTCCTAGAAGGAAGCCAATAACTTGGCTTACCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 90 bp | AGTCTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTaGCAAGCCATGGAATGGAAGGGTACAGAGGTAAAACAAGGAACA | + |
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Preference number: 1 (lower is better) Translates to: SLESSQVSLGPEGQE*QAMEWKGTEVKQGT Trigger: TGTTCCTTGTTTTACCTCTGTACCCTTCCATTCCATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 90 bp | TTTGTAGATAGAATAGCTATCTTGGGCAAAGCCAAGAACAGAACGTaGAGCTGTGAATCTGAGGTGGCCTGGCCATCTGAAGAGCCTGGC | + |
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Preference number: 1 (lower is better) Translates to: FVDRIAILGKAKNRT*SCESEVAWPSEEPG Trigger: GCCAGGCTCTTCAGATGGCCAGGCCACCTCAGATTCACAGCTTCACGTTCTGTTCTTGGCTTTGCCCAAGATAGCTATTCTATCTACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCAAGCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCCACAGTGCACTGCATaGCTTGGCTGGGAGGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: PTQAANGRHKQGESHIHRPQCTA*LGWEAQ Trigger: TTGGGCCTCCCAGCCAAGTCATGCAGTGCACTGTGG...CCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGAGGAGGCTATGGGGATaGAGGGGCAGACCCAACCTG | + |
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Preference number: 2 (lower is better) Translates to: LESSQVSLGPEGQEWQAMRRLWG*RGRPNL Trigger: CAGGTTGGGTCTGCCCCTCCATCCCCATAGCCTCCT...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR TCA 90 bp | CACACAACCCCTGACTTTGTGGCTCTTCCAACAGGCACAGAGCCCTCTATTAGATCCTCCGCCACCCACTaGCAGTGGCAAGTGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: HTTPDFVALPTGTEPSIRSSATH*QWQVAA Trigger: AGCTGCCACTTGCCACTGTCAGTGGGTGGCGGAGGA...TCTAATAGAGGGCTCTGTGCCTGTTGGAAGAGCCACAAAGTCAGGGGTTGTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR TCA 90 bp | CCCACCCAAGCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGTCTGTAGGGGCTGCCTaGAATCAGGTAAACGTGAGG | + |
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Preference number: 2 (lower is better) Translates to: PTQAANGRHKQGESHIHRSVGAA*NQVNVR Trigger: CCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGA...CCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | CACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGGAAGCTAAGTCTGTGTaGACTTGTCCTAGAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: HPSLEAAASLRALRSKPWEAKSV*TCPREV Trigger: TACCTCTCTAGGACAAGTGCACACAGACTTAGCTTC...CCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR-3UTR CCA 90 bp | CCCACCCAAGCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCTGAGGTCTAAGCCCTaGTGGTCTTCAGTCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PTQAANGRHKQGESHIHRLRSKP*WSSVRR Trigger: TCTTCTGACTGAAGACCACCAGGGCTTAGACCTCAG...CCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGGCTCTACATAGAGAGTaGCAGGACAGTCAGGGCTAC | + |
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Preference number: 2 (lower is better) Translates to: LESSQVSLGPEGQEWQAMALHRE*QDSQGY Trigger: GTAGCCCTGACTGTCCTGGCACTCTCTATGTAGAGC...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGTCCATGTCTCCCTTCTaGTCCTATCTGAGCCACAAC | + |
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Preference number: 2 (lower is better) Translates to: LESSQVSLGPEGQEWQAMSMSPF*SYLSHN Trigger: GTTGTGGCTCAGATAGGAGCAGAAGGGAGACATGGA...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCGAAGCTAAGTCTGTGTaGACTTGTCCTAGAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: LCRGCLKSGKREDDPPPPEAKSV*TCPREV Trigger: TACCTCTCTAGGACAAGTGCACACAGACTTAGCTTC...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACTGAGGTCTAAGCCCTaGTGGTCTTCAGTCAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: LLCRGCLKSGKREDDPPPLRSKP*WSSVRR Trigger: TCTTCTGACTGAAGACCACCAGGGCTTAGACCTCAG...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR-3UTR CCA 90 bp | AACACAATGGGTTCGTATTCCACACTGGAGTCTTCAGGCCACAGAACTCACCTGGGAACCACACTAGCCTaGTCCAGCTGCAGCCAGATT | + |
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Preference number: 2 (lower is better) Translates to: NTMGSYSTLESSGHRTHLGTTLA*SSCSQI Trigger: AATCTGGCTGCAGCTGGACCAGGCTAGTGTGGTTCC...CAGGTGAGTTCTGTGGCCTGAAGACTCCAGTGTGGAATACGAACCCATTGTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | TGCAGAATACAACCACCTTTTAGAACTAGCTTTCTTCCATGCCCAGAAACCACTCTGCCCACAGTGCACTaGATGACTTGGCTGGGAGGC | + |
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Preference number: 2 (lower is better) Translates to: CRIQPPFRTSFLPCPETTLPTVH*MTWLGG Trigger: GCCTCCCAGCCAAGTCATGCAGTGCACTGTGGGCAG...AGTGGTTTCTGGGCATGGAAGAAAGCTAGTTCTAAAAGGTGGTTGTATTCTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR CCA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGCCAAACTTATCTATTTaGGGGGATAGGACCTCCTTA | + |
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Preference number: 2 (lower is better) Translates to: LESSQVSLGPEGQEWQAMPNLSI*GDRTSL Trigger: TAAGGAGGTCCTATCCCCCCAAATAGATAAGTTTGG...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR GCA 90 bp | TCAGTGCTCCACCAGAACAGGCTAAATAGGTTCTCCTCATCCAATCTGTGCCCAGAAGCTAAGTCTGTGTaGACTTGTCCTAGAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: SVLHQNRLNRFSSSNLCPEAKSV*TCPREV Trigger: TACCTCTCTAGGACAAGTGCACACAGACTTAGCTTC...TGGGCACAGATTGGATGAGGAGAACCTATTTAGCCTGTTCTGGTGGAGCACTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR TCA 90 bp | TGCAGAATACAACCACCTTTTAGAACTAGCTTTCTTCCATGCCCAGAAACCACTAGAGAGGCAGATCTCTaGGAGTTTGAGACCAGCCTG | + |
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Preference number: 2 (lower is better) Translates to: CRIQPPFRTSFLPCPETTREADL*EFETSL Trigger: CAGGCTGGTCTCAAACTCTCAGAGATCTGCCTCTCT...AGTGGTTTCTGGGCATGGAAGAAAGCTAGTTCTAAAAGGTGGTTGTATTCTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | GCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGTaGTCTTCAGTCAGAAGACAGGCTCCCGGCAGTGTC | + |
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Preference number: 3 (lower is better) Translates to: AASLRALRSKPW*SSVRRQAPGSV Trigger: GACACTGCCGGGAGCCTGTCTTCTGACTGAAGACCACCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR-3UTR CAA 90 bp | ACAGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGAGGCAGCTGCCTCCTaGAGGGCTCTGAGGTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: TVASGSFRQSTFLAAPKSEAAAS*RALRSK Trigger: CTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTC...AGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR GCA 72 bp | GGAGGCTATGGGGATGGAGGGGCAGACCCAACCTGTTaGTATGGAAACCTGTCTCTAGATGGCAAGTCCACC | + |
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Preference number: 3 (lower is better) Translates to: GGYGDGGADPTC*YGNLSLDGKST Trigger: GGTGGACTTGCCATCTAGAGACAGGTTTCCATAGCAACAGGTTGGGTCTGCCCCTCCATCCCCATAGCCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR CAA 90 bp | ACATGCCCCCTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATGAGGCAGCTGCCTCCTaGAGGGCTCTGAGGTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: TCPLLCRGCLKSGKREDDEAAAS*RALRSK Trigger: CTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTC...ATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGACACAACCCCTGACTTaGTGGCTCTTCCAACAGGCA | + |
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Preference number: 3 (lower is better) Translates to: LESSQVSLGPEGQEWQAMTQPLT*WLFQQA Trigger: TGCCTGTTGGAAGAGCCACAAAGTCAGGGGTTGTGT...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | AGACGTAAACATGCCCCCTTCTCTGTAGGGGCTGCCTaGAATCAGGTAAACGTGAGGATGATCCTCCGCCAC | + |
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Preference number: 3 (lower is better) Translates to: RRKHAPFSVGAA*NQVNVRMILRH Trigger: GTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGTTTACGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR CCA 72 bp | TGCATGACTTGGCTGGGAGGCCCAAACTTATCTATTTaGGGGGATAGGACCTCCTTAGGGGGATGGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: CMTWLGGPNLSI*GDRTSLGGWPQ Trigger: TTGTGGCCATCCCCCTAAGGAGGTCCTATCCCCCCAAATAGATAAGTTTGGGCCTCCCAGCCAAGTCATGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | AAGCCAAGAACAGAACGTGAAGCTGTGAATCTGAGGTaGCCTGGCCATCTGAAGAGCCTGGCAAGGCCTAGA | + |
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Preference number: 3 (lower is better) Translates to: KPRTEREAVNLR*PGHLKSLARPR Trigger: TCTAGGCCTTGCCAGGCTCTTCAGATGGCCAGGCCACCTCAGATTCACAGCTTCACGTTCTGTTCTTGGCTT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | CCAGATTTTCCTTCTCAGCCTGTTACACACAACCCCTaGCTTTGTGGCTCTTCCAACAGGCACAGAGCCCTC | + |
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Preference number: 3 (lower is better) Translates to: PDFPSQPVTHNP*LCGSSNRHRAL Trigger: GAGGGCTCTGTGCCTGTTGGAAGAGCCACAAAGTCAGGGGTTGTGTGTAACAGGCTGAGAAGGAAAATCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR GCA 72 bp | ATAGCCCCATCCTCCTCCCATTCCATGTCTCCCTTCTaGTCCTATCTGAGCCACAACCACCTTTCCATAGTG | + |
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Preference number: 3 (lower is better) Translates to: IAPSSSHSMSPF*SYLSHNHLSIV Trigger: CACTATGGAAAGGTGGTTGTGGCTCAGATAGGAGCAGAAGGGAGACATGGAATGGGAGGAGGATGGGGCTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR GCA 72 bp | CAGAACAGGCTAAATAGGTTCTCCTCATCCAATCTGTaGCCACCCAAGCTGCCAATGGGAGGCATAAGCAGG | + |
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Preference number: 3 (lower is better) Translates to: QNRLNRFSSSNL*PPKLPMGGISR Trigger: CCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGGCACAGATTGGATGAGGAGAACCTATTTAGCCTGTTCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | TTTACTAAGCCAGTGATCCCAGGAAACCCTGCCAGGTaGATCAGGACAGACGTAAACATGCCCCCTTCTCTG | + |
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Preference number: 3 (lower is better) Translates to: FTKPVIPGNPAR*IRTDVNMPPSL Trigger: CAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCTGGGATCACTGGCTTAGTAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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| 3UTR CCA 72 bp | CAAGTTATTGGCTTCCTTCTAGGAACCACACTAGCCTaGTCCAGCTGCAGCCAGATTTTCCTTCTCAGCCTG | + |
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Preference number: 3 (lower is better) Translates to: QVIGFLLGTTLA*SSCSQIFLLSL Trigger: CAGGCTGAGAAGGAAAATCTGGCTGCAGCTGGACCAGGCTAGTGTGGTTCCTAGAAGGAAGCCAATAACTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | TTTGCTGGCCAAACACAATGGGTTCGTATTCCACACTaGAGTCTTCAGGCCACAGAACTCACCTGTGACGAC | + |
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Preference number: 3 (lower is better) Translates to: FAGQTQWVRIPH*SLQATELTCDD Trigger: GTCGTCACAGGTGAGTTCTGTGGCCTGAAGACTCCAGTGTGGAATACGAACCCATTGTGTTTGGCCAGCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | GCCCCTGCTGGGCATTATGAGAAATACAGCCCAGTGTaGCCAGTACTTTTTACTAAGCCAGTGATCCCAGGA | + |
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Preference number: 3 (lower is better) Translates to: APAGHYEKYSPV*PVLFTKPVIPG Trigger: TCCTGGGATCACTGGCTTAGTAAAAAGTACTGGTCACACTGGGCTGTATTTCTCATAATGCCCAGCAGGGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | TCCTTCTCAGCCTGTTACACACAACCCCTGACTTTGTaGCTCTTCCAACAGGCACAGAGCCCTCTATTAGAT | + |
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Preference number: 3 (lower is better) Translates to: SFSACYTQPLTL*LFQQAQSPLLD Trigger: ATCTAATAGAGGGCTCTGTGCCTGTTGGAAGAGCCACAAAGTCAGGGGTTGTGTGTAACAGGCTGAGAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | CACACCTTTAATCCCAGTACCAGAGAGGCAGATCTCTaGGAGTTTGAGACCAGCCTGCTCTACATAGAGAGT | + |
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Preference number: 3 (lower is better) Translates to: HTFNPSTREADL*EFETSLLYIES Trigger: ACTCTCTATGTAGAGCAGGCTGGTCTCAAACTCTCAGAGATCTGCCTCTCTGGTACTGGGATTAAAGGTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | AGAATAGCTATCTTGGGCAAAGCCAAGAACAGAACGTaGAGCTGTGAATCTGAGGTGGCCTGGCCATCTGAA | + |
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Preference number: 3 (lower is better) Translates to: RIAILGKAKNRT*SCESEVAWPSE Trigger: TTCAGATGGCCAGGCCACCTCAGATTCACAGCTTCACGTTCTGTTCTTGGCTTTGCCCAAGATAGCTATTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR TCA 72 bp | GAACTAAGCTCAACTAGCAGCCCCTGCTGGGCATTATaGGAAATACAGCCCAGTGTGACCAGTACTTTTTAC | + |
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Preference number: 3 (lower is better) Translates to: ELSSTSSPCWAL*EIQPSVTSTFY Trigger: GTAAAAAGTACTGGTCACACTGGGCTGTATTTCTCATAATGCCCAGCAGGGGCTGCTAGTTGAGCTTAGTTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR CCA 72 bp | ACAGTTAGTTTTGGTAAGGTGGGTAAGCCAAGTTATTaGCTTCCTTCTAGGAACCACACTAGCCTGGTCCAG | + |
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Preference number: 3 (lower is better) Translates to: TVSFGKVGKPSY*LPSRNHTSLVQ Trigger: CTGGACCAGGCTAGTGTGGTTCCTAGAAGGAAGCCAATAACTTGGCTTACCCACCTTACCAAAACTAACTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
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| 3UTR-3UTR CAA 90 bp | TGCAGAATACAACCACCTTTTAGAACTAGCTTTCTTCCATGCCCAGAAACCACTGGGTGCTGGACTAACTaGTACTTGATCAGGTCGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CRIQPPFRTSFLPCPETTGCWTN*YLIRSL Trigger: AAGCGACCTGATCAAGTACAAGTTAGTCCAGCACCC...AGTGGTTTCTGGGCATGGAAGAAAGCTAGTTCTAAAAGGTGGTTGTATTCTGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| 3UTR CCA 72 bp | AGACCCAACCTGTTGCTATGGAAACCTGTCTCTAGATaGCAAGTCCACCTGGGTAAACTAATCTTGCAGAAT | + |
|
Preference number: 3 (lower is better) Translates to: RPNLLLWKPVSR*QVHLGKLILQN Trigger: ATTCTGCAAGATTAGTTTACCCAGGTGGACTTGCCATCTAGAGACAGGTTTCCATAGCAACAGGTTGGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| 3UTR TCA 72 bp | ATAATAAATGATGTATTCTGCCCACAGTGCACTGCATaGCTTGGCTGGGAGGCCCAAACTTATCTATTTGGG | + |
|
Preference number: 3 (lower is better) Translates to: IINDVFCPQCTA*LGWEAQTYLFG Trigger: CCCAAATAGATAAGTTTGGGCCTCCCAGCCAAGTCATGCAGTGCACTGTGGGCAGAATACATCATTTATTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| 3UTR GCA 72 bp | AGAATACAACCACCTTTTAGAACTAGCTTTCTTCCATaGCCAGAAACCACTCCAGTTCCTGAAAAAGATGGT | + |
|
Preference number: 3 (lower is better) Translates to: RIQPPFRTSFLP*PETTPVPEKDG Trigger: ACCATCTTTTTCAGGAACTGGAGTGGTTTCTGGGCATGGAAGAAAGCTAGTTCTAAAAGGTGGTTGTATTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR CCA 90 bp | CAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCGCGGTCAGGGTTTGCTaGGCCTCCAGCCCCAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: QSTFLAAPKSGGSCLLEGAVRVC*ASSPSP Trigger: GGGGCTGGGGCTGGAGGCCCAGCAAACCCTGACCGC...GCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTCCGGGAGGTGCCACTaGGGCCACCAGAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSSGRCH*GHQKQG Trigger: GCCCTGCTTCTGGTGGCCCCAGTGGCACCTCCCGGA...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCTCCGGGAGGTGCCACTaGGGCCACCAGAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPSGRCH*GHQKQG Trigger: GCCCTGCTTCTGGTGGCCCCAGTGGCACCTCCCGGA...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCTCAGTTTCGCCGCTCGGTCTCTGTaGGGCAGGACGCCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: AANGRHKQGESHIHRLSFAARSL*GRTPPP Trigger: TGGAGGCGGCGTCCTGCCCCACAGAGACCGAGCGGC...GAAACTGAGCCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | CAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCCAGGGTTCCGGGAGGTaGCACTGGGGCCACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QSTFLAAPKSGGSCLLEGQGSGR*HWGHQK Trigger: CTTCTGGTGGCCCCAGTGGCACCTCCCGGAACCCTG...GCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCCCAGTCTCGGCCCCGTaGCATCATCTCCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSPVSAP*HHLQAL Trigger: CAGGGCCTGGAGATGATGGCACGGGGCCGAGACTGG...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | AGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGTCCGGGAGGTGCCACTaGGGCCACCAGAAGCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: SGKWQLPAEYISSSTQVWSGRCH*GHQKQG Trigger: GCCCTGCTTCTGGTGGCCCCAGTGGCACCTCCCGGA...CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCAGCCGCTCGGTCTCTGTaGGGCAGGACGCCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPAARSL*GRTPPP Trigger: TGGAGGCGGCGTCCTGCCCCACAGAGACCGAGCGGC...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGCCACAGAACTCACCTGTGACGACTCAGTGCTCCACCAGAACAGGCTACAGGGTTCCGGGAGGTaGCACTGGGGCCACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LQATELTCDDSVLHQNRLQGSGR*HWGHQK Trigger: CTTCTGGTGGCCCCAGTGGCACCTCCCGGAACCCTG...TAGCCTGTTCTGGTGGAGCACTGAGTCGTCACAGGTGAGTTCTGTGGCCTGAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCGCCGGGCTTCACCTGTaGCCTTGCCCAGGGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSAGLHL*PCPGSY Trigger: GTAAGACCCTGGGCAAGGGCACAGGTGAAGCCCGGC...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCGCCGGGCTTCACCTGTaGCCTTGCCCAGGGTCTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QSTFLAAPKSGGSCLLEGAGLHL*PCPGSY Trigger: GTAAGACCCTGGGCAAGGGCACAGGTGAAGCCCGGC...GCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCACACGCTGCAGCTGCTaGTGGTACCAGTCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPTRCSC*WYQSRP Trigger: GGGCCGAGACTGGTACCAGCAGCAGCTGCAGCGTGT...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGTTCAGCCCCAAAGTCTaGAGCAGCTCTGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HPSLEAAASLRALRSKPWFSPKV*SSSALA Trigger: AGCCAGAGCAGAGCTGCTGCAGACTTTGGGGCTGAA...CCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTACAGGGTTCCGGGAGGTaGCACTGGGGCCACCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVQGSGR*HWGHQK Trigger: CTTCTGGTGGCCCCAGTGGCACCTCCCGGAACCCTG...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCAGTCTCGGCCCCGTaGCATCATCTCCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPPVSAP*HHLQAL Trigger: CAGGGCCTGGAGATGATGGCACGGGGCCGAGACTGG...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGACACGCTGCAGCTGCTaGTGGTACCAGTCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LESSQVSLGPEGQEWQAMTRCSC*WYQSRP Trigger: GGGCCGAGACTGGTACCAGCAGCAGCTGCAGCGTGT...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTCTGCCAGAGCAGGCTaGAGTCAACAGCTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSSARAG*SQQLPQ Trigger: CTGGGGGAGCTGTTGACTGCAGCCTGCTCTGGCAGA...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGCCAGAGCAGGCTaGAGTCAACAGCTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QSTFLAAPKSGGSCLLEGSARAG*SQQLPQ Trigger: CTGGGGGAGCTGTTGACTGCAGCCTGCTCTGGCAGA...GCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | GCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCTCAGTTTCCCTCTGCCTCCTGGGTaGAGAAGCAGGCCGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: AANGRHKQGESHIHRLSFPLPPG*RSRPGC Trigger: ACAACCCGGCCTGCTTCTCCACCCAGGAGGCAGAGG...GAAACTGAGCCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | CACACAACCCCTGACTTTGTGGCTCTTCCAACAGGCACAGAGCCCTCTATTAGACCAGTCTCGGCCCCGTaGCATCATCTCCAGGCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HTTPDFVALPTGTEPSIRPVSAP*HHLQAL Trigger: CAGGGCCTGGAGATGATGGCACGGGGCCGAGACTGG...TCTAATAGAGGGCTCTGTGCCTGTTGGAAGAGCCACAAAGTCAGGGGTTGTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTACACGCTGCAGCTGCTaGTGGTACCAGTCTCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: TVASGSFRQSTFLAAPKSTRCSC*WYQSRP Trigger: GGGCCGAGACTGGTACCAGCAGCAGCTGCAGCGTGT...AGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCCCAGAGCACTCACTCTaGCAGAGCAGGCTGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPPEHSL*QSRLQS Trigger: TGACTGCAGCCTGCTCTGGCAGAGTGAGTGCTCTGG...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTGCAGCCAGATTTTCCTTCTCAGCCTGTTACACACAACCCCTGACTTTGCCTCCTCTGCCTCCTaGGTGGAGAAGCAGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSQIFLLSLLHTTPDFASSAS*VEKQAG Trigger: CCCGGCCTGCTTCTCCACCCAGGAGGCAGAGGAGGC...AAAGTCAGGGGTTGTGTGTAACAGGCTGAGAAGGAAAATCTGGCTGCAGCTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGGGATGTCGAAGAGGGTaGGCAGGCTCTGGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SGKWQLPAEYISSSTQVWGCRRG*AGSGER Trigger: CCTTTCTCCAGAGCCTGCGCACCCTCTTCGACATCC...CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACTGTGCTGCCTCCTCTaGCTCCTGGGTGGAGAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPLCCLL*LLGGEA Trigger: TGCTTCTCCACCCAGGAGGCAGAGGAGGCAGCACAG...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCAGCACTTGTGCTAGGTaGTCCTGTGCTGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSSTCAR*SCAASS Trigger: AGAGGAGGCAGCACAGGAGCACCTAGCACAAGTGCT...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | CACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGTCTAACTCCTTCATCTaGTTCAACAGGCTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HPSLEAAASLRALRSKPWSNSFI*FNRLQS Trigger: GGACTGCAGCCTGTTGAAGCAGATGAAGGAGTTAGA...CCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCATCATCTCCAGGCCCTaGAGAAGCACCTCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPIISRP*RSTSCS Trigger: GGAACAGGAGGTGCTTCTGCAGGGCCTGGAGATGAT...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | ACAGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTTCTGCCAGAGCAGGCTaGAGTCAACAGCTCCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TVASGSFRQSTFLAAPKSSARAG*SQQLPQ Trigger: CTGGGGGAGCTGTTGACTGCAGCCTGCTCTGGCAGA...AGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGACGAAGGCAGAGCTCTaGCAGAGCAGGCTGCAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGKWQLPAEYISSSTQVWTKAEL*QSRLQS Trigger: TGACTGCAGCCTGCTCTGGCAGAGCTCTGCCTTCGT...CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028329.13 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCAACAAGGACAAGGGATaGCAGGCAGCCTCCAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QSTFLAAPKSGGSCLLEGNKDKG*QAASRA Trigger: TGCTCTGGAGGCTGCCTGGCATCCCTTGTCCTTGTT...GCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR TCA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTATGCAGGGTGTCACACTaGGAAGAGCCCAAATCCGCG | + |
|
Preference number: 4 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVCRVSH*EEPKSA Trigger: CGCGGATTTGGGCTCTTCTCAGTGTGACACCCTGCA...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR TCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCCAGTCACCTCCTGAGTaGGAAGCCGGTTCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPQSPPE*EAGSVL Trigger: AAGAACAGAACCGGCTTCTCACTCAGGAGGTGACTG...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028329.13 ENSMUST00000114293.9 |
||
| CDS-3UTR TCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCTGTGGAAGTACACAGTaGGCCAGACCTTTCCTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSCGSTQ*ARPFLA Trigger: TGCCAGGAAAGGTCTGGCTCACTGTGTACTTCCACA...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR GCA 90 bp | CTTCAGGCCACAGAACTCACCTGTGACGACTCAGTGCTCCACCAGAACAGGCTAATCATCTCCAGGCCCTaGAGAAGCACCTCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LQATELTCDDSVLHQNRLIISRP*RSTSCS Trigger: GGAACAGGAGGTGCTTCTGCAGGGCCTGGAGATGAT...TAGCCTGTTCTGGTGGAGCACTGAGTCGTCACAGGTGAGTTCTGTGGCCTGAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGATCATCTCCAGGCCCTaGAGAAGCACCTCCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SGKWQLPAEYISSSTQVWIISRP*RSTSCS Trigger: GGAACAGGAGGTGCTTCTGCAGGGCCTGGAGATGAT...CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCACCCAGGATGGTCTGTTGCTaGCAGACTGGAGTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LCRGCLKSGKREDDPPPPRMVCC*QTGVEG Trigger: ACCCTCAACTCCAGTCTGGCAGCAACAGACCATCCT...GGGTGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| 3UTR CAA 72 bp | AGGAGGCTATGGGGATGGAGGGGCAGACCCAACCTGTaGCTATGGAAACCTGTCTCTAGATGGCAAGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRLWGWRGRPNL*LWKPVSRWQVH Trigger: GTGGACTTGCCATCTAGAGACAGGTTTCCATAGCAACAGGTTGGGTCTGCCCCTCCATCCCCATAGCCTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR TCA 90 bp | CTTCAGGCCACAGAACTCACCTGTGACGACTCAGTGCTCCACCAGAACAGGCTACAGTCACCTCCTGAGTaGGAAGCCGGTTCTGTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LQATELTCDDSVLHQNRLQSPPE*EAGSVL Trigger: AAGAACAGAACCGGCTTCTCACTCAGGAGGTGACTG...TAGCCTGTTCTGGTGGAGCACTGAGTCGTCACAGGTGAGTTCTGTGGCCTGAAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTATTCAGCCCCAAAGTCTaGAGCAGCTCTGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVFSPKV*SSSALA Trigger: AGCCAGAGCAGAGCTGCTGCAGACTTTGGGGCTGAA...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCATGAGGATGGTCTGTTaGTGCCAGACTGGAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSMRMVC*CQTGVE Trigger: CTCAACTCCAGTCTGGCAGCAACAGACCATCCTCAT...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTACGAAGGCAGAGCCTGTaGAAGTACACAGTGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVRRQSL*KYTVSQ Trigger: CTGGCTCACTGTGTACTTCCACAGGCTCTGCCTTCG...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR GCA 90 bp | TCCAGCTGCAGCCAGATTTTCCTTCTCAGCCTGTTACACACAACCCCTGACTTTGGATGTCGAAGAGGGTaGGCAGGCTCTGGAGAAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SSCSQIFLLSLLHTTPDFGCRRG*AGSGER Trigger: CCTTTCTCCAGAGCCTGCGCACCCTCTTCGACATCC...AAAGTCAGGGGTTGTGTGTAACAGGCTGAGAAGGAAAATCTGGCTGCAGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | ACATGCCCCCTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATTTCAGCCCCAAAGTCTaGAGCAGCTCTGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TCPLLCRGCLKSGKREDDFSPKV*SSSALA Trigger: AGCCAGAGCAGAGCTGCTGCAGACTTTGGGGCTGAA...ATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCAAGGATGGTCTGTTGCTaGCAGACTGGAGTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPRMVCC*QTGVEG Trigger: ACCCTCAACTCCAGTCTGGCAGCAACAGACCATCCT...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTAGGTCTTACAGGCTGCTaGACCTTCTTCAGCACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVGLTGC*TFFSTC Trigger: ACAAGTGCTGAAGAAGGTGCAGCAGCCTGTAAGACC...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCAATGAGGATGGTCTGTTaGTGCCAGACTGGAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPMRMVC*CQTGVE Trigger: CTCAACTCCAGTCTGGCAGCAACAGACCATCCTCAT...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CCA 90 bp | ACAGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGAGCCAGACCTTTCCTaGCATAGCATCCAGAACAAG | + |
|
Preference number: 4 (lower is better) Translates to: TVASGSFRQSTFLAAPKSEPDLS*HSIQNK Trigger: CTTGTTCTGGATGCTATGCCAGGAAAGGTCTGGCTC...AGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR GCA 90 bp | CTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATCCTCCGCCATCTAACTCCTTCATCTaGTTCAACAGGCTGCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LLCRGCLKSGKREDDPPPSNSFI*FNRLQS Trigger: GGACTGCAGCCTGTTGAAGCAGATGAAGGAGTTAGA...TGGCGGAGGATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR GCA 90 bp | AACACAATGGGTTCGTATTCCACACTGGAGTCTTCAGGCCACAGAACTCACCTGAGGATGGTCTGTTGCTaGCAGACTGGAGTTGAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: NTMGSYSTLESSGHRTHLRMVCC*QTGVEG Trigger: ACCCTCAACTCCAGTCTGGCAGCAACAGACCATCCT...CAGGTGAGTTCTGTGGCCTGAAGACTCCAGTGTGGAATACGAACCCATTGTGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR GCA 90 bp | ATGGAAGGGTACAGAGGTAAAACAAGGAACACAAAGGAGGCTATGGGGATGGAGATGAGGATGGTCTGTTaGTGCCAGACTGGAGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: MEGYRGKTRNTKEAMGMEMRMVC*CQTGVE Trigger: CTCAACTCCAGTCTGGCAGCAACAGACCATCCTCAT...CTCCATCCCCATAGCCTCCTTTGTGTTCCTTGTTTTACCTCTGTACCCTTCCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS CCA 90 bp | TGCCCTTGCCCAGGGTCTTACAGGCTGCTGCACCCAAATCCGCGCTaGGGATTTGCTCCAGCGCCTTGCTCAGGGGCCGCTCGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CPCPGSYRLLHPNPR*GFAPAPCSGAARSL Trigger: CAGAGACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGTGCAGCAGCCTGTAAGACCCTGGGCAAGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | CACCCAAGTCTGGAGGCAGCTGCCTCCTTGAGGGCTCTGAGGTCTAAGCCCTGGGCGTGCGTCTGCACCTaGCCAGCGGGACTCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: HPSLEAAASLRALRSKPWACVCT*PAGLDL Trigger: GAGATCGAGTCCCGCTGGCAAGGTGCAGACGCACGC...CCAGGGCTTAGACCTCAGAGCCCTCAAGGAGGCAGCTGCCTCCAGACTTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS TCA 90 bp | CCTGGGTGGAGAAGCAGGCCGGGTTGTCTCTGCAGGGTGTCACACTaGGAAGAGCCCAAATCCGCGCTGGGGATTTGCTCCAGCGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: PGWRSRPGCLCRVSH*EEPKSALGICSSAL Trigger: CAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGCTCTTCTCAGTGTGACACCCTGCAGAGACAACCCGGCCTGCTTCTCCACCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS CCA 90 bp | GTTGTCTCTGCAGGGTGTCACACTGAGAAGAGCCCAAATCCGCGCTaGGGATTTGCTCCAGCGCCTTGCTCAGGGGCCGCTCGGTCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: VVSAGCHTEKSPNPR*GFAPAPCSGAARSL Trigger: CAGAGACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGCTCTTCTCAGTGTGACACCCTGCAGAGACAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR CAA 90 bp | AGTGGCAAGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGGCAGGCGGTCAGGGTTaGCTGGGCCTCCAGCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SGKWQLPAEYISSSTQVWAGGQG*LGLQPQ Trigger: CTGGGGCTGGAGGCCCAGCAAACCCTGACCGCCTGC...CCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACTTGCCACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS GCA 90 bp | CAGGGTCTTACAGGCTGCTGCACCTTCTTCAGCACTTGTGCTAGGTaGTCCTGTGCTGCCTCCTCTGCCTCCTGGGTGGAGAAGCAGGCC | + |
|
Preference number: 5 (lower is better) Translates to: QGLTGCCTFFSTCAR*SCAASSASWVEKQA Trigger: GGCCTGCTTCTCCACCCAGGAGGCAGAGGAGGCAGCACAGGAGCACCTAGCACAAGTGCTGAAGAAGGTGCAGCAGCCTGTAAGACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS GCA 90 bp | TTCATCTGCTTCAACAGGCTGCAGTCCACACCATTGGTGATGGTATaGCTTCGACGCTCGCCTCGGGCCCGTGGAGCCTGCCGGGCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FICFNRLQSTPLVMV*LRRSPRARGACRAS Trigger: TGAAGCCCGGCAGGCTCCACGGGCCCGAGGCGAGCGTCGAAGGCATACCATCACCAATGGTGTGGACTGCAGCCTGTTGAAGCAGATGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCGCGTGCGTCTGCACCTaGCCAGCGGGACTCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSACVCT*PAGLDL Trigger: GAGATCGAGTCCCGCTGGCAAGGTGCAGACGCACGC...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCGCTGCCAGACTGGAGTaGAGGGTGAGGGAGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSAARLE*RVREGP Trigger: TGGGCCCTCCCTCACCCTCAACTCCAGTCTGGCAGC...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS TCA 90 bp | CTAACTCCTTCATCTGCTTCAACAGGCTGCAGTCCACACCATTGGTaGTGGTATGCCTTCGACGCTCGCCTCGGGCCCGTGGAGCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: LTPSSASTGCSPHHW*WYAFDARLGPVEPA Trigger: GGCAGGCTCCACGGGCCCGAGGCGAGCGTCGAAGGCATACCATCACCAATGGTGTGGACTGCAGCCTGTTGAAGCAGATGAAGGAGTTAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAGTCTAGTCAAGTGTCTCTAGGACCTGAGGGACAGGAGTGGCAAGCCATGGCTGCCAGACTGGAGTaGAGGGTGAGGGAGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LESSQVSLGPEGQEWQAMAARLE*RVREGP Trigger: TGGGCCCTCCCTCACCCTCAACTCCAGTCTGGCAGC...CATGGCTTGCCACTCCTGTCCCTCAGGTCCTAGAGACACTTGACTAGACTCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS GCA 90 bp | GAGCCAGACCTTTCCTGGCATAGCATCCAGAACAAGGACAAGGGATaGCAGGCAGCCTCCAGAGCACTCACTCTGCCAGAGCAGGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EPDLSWHSIQNKDKG*QAASRALTLPEQAA Trigger: TGCAGCCTGCTCTGGCAGAGTGAGTGCTCTGGAGGCTGCCTGGCATCCCTTGTCCTTGTTCTGGATGCTATGCCAGGAAAGGTCTGGCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS-3UTR CAA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTAGCTGCCAGACTGGAGTaGAGGGTGAGGGAGGGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVAARLE*RVREGP Trigger: TGGGCCCTCCCTCACCCTCAACTCCAGTCTGGCAGC...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | ACATGCCCCCTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATGCGTGCGTCTGCACCTaGCCAGCGGGACTCGATCTC | + |
|
Preference number: 5 (lower is better) Translates to: TCPLLCRGCLKSGKREDDACVCT*PAGLDL Trigger: GAGATCGAGTCCCGCTGGCAAGGTGCAGACGCACGC...ATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | ACATGCCCCCTTCTCTGTAGGGGCTGCCTGAAATCAGGTAAACGTGAGGATGATATTTGCTCCAGCGCCTaGCTCAGGGGCCGCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: TCPLLCRGCLKSGKREDDICSSA*LRGRSV Trigger: GACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAAT...ATCATCCTCACGTTTACCTGATTTCAGGCAGCCCCTACAGAGAAGGGGGCATGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | GCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCTCAGTTTCGAGAAGCAGGCCGGGTaGTCTCTGCAGGGTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: AANGRHKQGESHIHRLSFEKQAG*SLQGVT Trigger: TGTGACACCCTGCAGAGACAACCCGGCCTGCTTCTC...GAAACTGAGCCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR CAA 90 bp | TCCAGCTGCAGCCAGATTTTCCTTCTCAGCCTGTTACACACAACCCCTGACTTTATTTGCTCCAGCGCCTaGCTCAGGGGCCGCTCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSCSQIFLLSLLHTTPDFICSSA*LRGRSV Trigger: GACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAAT...AAAGTCAGGGGTTGTGTGTAACAGGCTGAGAAGGAAAATCTGGCTGCAGCTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR CAA 90 bp | CCCACCCAAGCTGCCAATGGGAGGCATAAGCAGGGAGAGAGTCACATCCACAGGCTGCAGTCCACACCATaGGTGATGGTATGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTQAANGRHKQGESHIHRLQSTP*VMVCLR Trigger: TCGAAGGCATACCATCACCAATGGTGTGGACTGCAG...CCTGTGGATGTGACTCTCTCCCTGCTTATGCCTCCCATTGGCAGCTTGGGTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS-3UTR CAA 90 bp | AGTGGCAGCTTCCGGCAGAGTACATTTCTAGCAGCACCCAAGTCTGGAGGCAGCCTGCAGTCCACACCATaGGTGATGGTATGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: SGSFRQSTFLAAPKSGGSLQSTP*VMVCLR Trigger: TCGAAGGCATACCATCACCAATGGTGTGGACTGCAG...GCTGCCTCCAGACTTGGGTGCTGCTAGAAATGTACTCTGCCGGAAGCTGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 90 bp | AGGCCCTGCAGAAGCACCTCCTGTTCCTGGTCTAACTCCTTCATCTaGTTCAACAGGCTGCAGTCCACACCATTGGTGATGGTATGCCTT | + |
|
Preference number: 5 (lower is better) Translates to: RPCRSTSCSWSNSFI*FNRLQSTPLVMVCL Trigger: AAGGCATACCATCACCAATGGTGTGGACTGCAGCCTGTTGAAGCAGATGAAGGAGTTAGACCAGGAACAGGAGGTGCTTCTGCAGGGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS-3UTR CAA 90 bp | AGGAAACCCTGCCAGGTGGATCAGGACAGACGTAAACATGCCCCCTTCTCTGTACTGCAGTCCACACCATaGGTGATGGTATGCCTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: RKPCQVDQDRRKHAPFSVLQSTP*VMVCLR Trigger: TCGAAGGCATACCATCACCAATGGTGTGGACTGCAG...TACAGAGAAGGGGGCATGTTTACGTCTGTCCTGATCCACCTGGCAGGGTTTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 72 bp | CGCGGCTCATCGGCCGGTGCGAACATCAGGCGCTGCTaGAGGGACGACTGGTCCCCAGGCCGGGCCGCGACG | + |
|
Preference number: 6 (lower is better) Translates to: RGSSAGANIRRC*RDDWSPGRAAT Trigger: CGTCGCGGCCCGGCCTGGGGACCAGTCGTCCCTGCAGCAGCGCCTGATGTTCGCACCGGCCGATGAGCCGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 72 bp | CGCGGTAGCCCCTCTGTACTAGGAGCGGGCGCAGCGTaGGATAGGCGGCCACGCTCGGCCATCGCTGCCACG | + |
|
Preference number: 6 (lower is better) Translates to: RGSPSVLGAGAA*DRRPRSAIAAT Trigger: CGTGGCAGCGATGGCCGAGCGTGGCCGCCTATCGCACGCTGCGCCCGCTCCTAGTACAGAGGGGCTACCGCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 72 bp | CGCCTCGGGCCCGTGGAGCCTGCCGGGCTTCACCTGTaGCCTTGCCCAGGGTCTTACAGGCTGCTGCACCTT | + |
|
Preference number: 6 (lower is better) Translates to: RLGPVEPAGLHL*PCPGSYRLLHL Trigger: AAGGTGCAGCAGCCTGTAAGACCCTGGGCAAGGGCACAGGTGAAGCCCGGCAGGCTCCACGGGCCCGAGGCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS GCA 72 bp | CCACCGGGACACATAACAGCTCAGGGTTCCGGGAGGTaGCACTGGGGCCACCAGAAGCAGGGCACGCACTCA | + |
|
Preference number: 6 (lower is better) Translates to: PPGHITAQGSGR*HWGHQKQGTHS Trigger: TGAGTGCGTGCCCTGCTTCTGGTGGCCCCAGTGGCACCTCCCGGAACCCTGAGCTGTTATGTGTCCCGGTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS CCA 72 bp | CCAGGGTCTTACAGGCTGCTGCACCCAAATCCGCGCTaGGGATTTGCTCCAGCGCCTTGCTCAGGGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PGSYRLLHPNPR*GFAPAPCSGAA Trigger: AGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGTGCAGCAGCCTGTAAGACCCTGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS CAA 72 bp | CTTACAGGCTGCTGCACCCAAATCCGCGCTGGGGATTaGCTCCAGCGCCTTGCTCAGGGGCCGCTCGGTCTC | + |
|
Preference number: 6 (lower is better) Translates to: LTGCCTQIRAGD*LQRLAQGPLGL Trigger: GAGACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGTGCAGCAGCCTGTAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 72 bp | TTACAGGCTGCTGCACCCAAATCCGCGCTGGGGATTTaGTCCAGCGCCTTGCTCAGGGGCCGCTCGGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LQAAAPKSALGI*SSALLRGRSVS Trigger: AGAGACCGAGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGTGCAGCAGCCTGTAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS CCA 72 bp | GCAGGGTGTCACACTGAGAAGAGCCCAAATCCGCGCTaGGGATTTGCTCCAGCGCCTTGCTCAGGGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AGCHTEKSPNPR*GFAPAPCSGAA Trigger: AGCGGCCCCTGAGCAAGGCGCTGGAGCAAATCCCCAGCGCGGATTTGGGCTCTTCTCAGTGTGACACCCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS TCA 72 bp | AGAAGCAGGCCGGGTTGTCTCTGCAGGGTGTCACACTaGGAAGAGCCCAAATCCGCGCTGGGGATTTGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSRPGCLCRVSH*EEPKSALGICS Trigger: GGAGCAAATCCCCAGCGCGGATTTGGGCTCTTCTCAGTGTGACACCCTGCAGAGACAACCCGGCCTGCTTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028329.13 |
||
| CDS TCA 72 bp | TCATCTGCTTCAACAGGCTGCAGTCCACACCATTGGTaGTGGTATGCCTTCGACGCTCGCCTCGGGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSASTGCSPHHW*WYAFDARLGPV Trigger: CACGGGCCCGAGGCGAGCGTCGAAGGCATACCATCACCAATGGTGTGGACTGCAGCCTGTTGAAGCAGATGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
||
| CDS GCA 72 bp | CTTTCCTGGCATAGCATCCAGAACAAGGACAAGGGATaGCAGGCAGCCTCCAGAGCACTCACTCTGCCAGAG | + |
|
Preference number: 6 (lower is better) Translates to: LSWHSIQNKDKG*QAASRALTLPE Trigger: CTCTGGCAGAGTGAGTGCTCTGGAGGCTGCCTGGCATCCCTTGTCCTTGTTCTGGATGCTATGCCAGGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS CCA 72 bp | GAGCCTGTGGAAGTACACAGTGAGCCAGACCTTTCCTaGCATAGCATCCAGAACAAGGACAAGGGATGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: EPVEVHSEPDLS*HSIQNKDKGCQ Trigger: CTGGCATCCCTTGTCCTTGTTCTGGATGCTATGCCAGGAAAGGTCTGGCTCACTGTGTACTTCCACAGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100323.3 |
||
| CDS GCA 72 bp | AGAAGCACCTCCTGTTCCTGGTCTAACTCCTTCATCTaGTTCAACAGGCTGCAGTCCACACCATTGGTGATG | + |
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Preference number: 6 (lower is better) Translates to: RSTSCSWSNSFI*FNRLQSTPLVM Trigger: CATCACCAATGGTGTGGACTGCAGCCTGTTGAAGCAGATGAAGGAGTTAGACCAGGAACAGGAGGTGCTTCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000028329.13 ENSMUST00000100323.3 ENSMUST00000114293.9 |
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