Pregenerated sensors for SAPCD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036185Ensembl transcript IDs: ENSMUST00000040151.9, ENSMUST00000174037.8, ENSMUST00000174117.2
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGATGAAGGGGAGAGCGAGGGCAAGGGGCATGGAGAAGGAGCTGTaGACACTTTGTACCAAGCTGTCTGAATTTCTCAGCCTGGAGCCC | + |
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Preference number: 1 (lower is better) Translates to: TMKGRARARGMEKEL*TLCTKLSEFLSLEP Trigger: GGGCTCCAGGCTGAGAAATTCAGACAGCTTGGTACAAAGTGTCCACAGCTCCTTCTCCATGCCCCTTGCCCTCGCTCTCCCCTTCATCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR TCA 90 bp | GCTGACCACCTCTCCCGTGGACTGGGTGACTCCTTTCCGATGCTTTaGCAACTCCTTGTGAATCAGACTGTGCAGACAAGCATTCACCTT | + |
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Preference number: 1 (lower is better) Translates to: ADHLSRGLGDSFPML*QLLVNQTVQTSIHL Trigger: AAGGTGAATGCTTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAAAGCATCGGAAAGGAGTCACCCAGTCCACGGGAGAGGTGGTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| 3UTR GCA 90 bp | CAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTaGTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGAGTCTCAGTGAT | + |
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Preference number: 1 (lower is better) Translates to: QGTRWCSFHSKFQGS*FSLVLLQLKASLSD Trigger: ATCACTGAGACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR-3UTR TCA 90 bp | ACTCACCAGTGCAGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTCTGGGGGAGCCTGGCTaGCCACCTCTCCCGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: THQCREGRVSCLHKGRPLLGEPG*PPLPWT Trigger: AGTCCACGGGAGAGGTGGTCAGCCAGGCTCCCCCAG...AAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCTGCACTGGTGAGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000174117.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGTGCAGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCCCTTACTCACCAGTaGAGGGAGGGGAGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: TSAGRGGSPVYTRVGPFGPLTHQ*REGRVS Trigger: GGAGACCCTCCCCTCCCTGCACTGGTGAGTAAGGGG...GCCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCTGCACTGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000174117.2 |
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| 3UTR-3UTR TCA 90 bp | CACAGGGCACAGAGCAGCACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGCTGGGGGAGCCTGGCTaGCCACCTCTCCCGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: HRAQSSTQGTRWCSFHSKLGEPG*PPLPWT Trigger: AGTCCACGGGAGAGGTGGTCAGCCAGGCTCCCCCAG...CTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGCTGCTCTGTGCCCTGTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000174037.8 |
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| 3UTR-3UTR TCA 90 bp | GCACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTGAAGGCGAGTCTCAGTaGTCACGCCTTCTCACCGGA | + |
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Preference number: 2 (lower is better) Translates to: AHRAPDGAVFTLSSRAAAEGESQ*SRLLTG Trigger: TCCGGTGAGAAGGCGTGATCACTGAGACTCGCCTTC...AGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR-3UTR TCA 90 bp | AGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGTTTGACAACTCCTTGTaGATCAGACTGTGCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: REGRVSCLHKGRPLWPWGFDNSL*IRLCRQ Trigger: TTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAAA...CCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| 3UTR-3UTR GCA 90 bp | CACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTACCCCTTACTCACCAGTaGAGGGAGGGGAGGGTCTCC | + |
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Preference number: 2 (lower is better) Translates to: HRAPDGAVFTLSSRAAALPLTHQ*REGRVS Trigger: GGAGACCCTCCCCTCCCTGCACTGGTGAGTAAGGGG...TAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR-3UTR TCA 90 bp | CACCAGTGCAGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGTCCTTTCCGATGCTTTaGCAACTCCTTGTGAATCAG | + |
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Preference number: 2 (lower is better) Translates to: HQCREGRVSCLHKGRPLWSFPML*QLLVNQ Trigger: CTGATTCACAAGGAGTTGTCAAAGCATCGGAAAGGA...CCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCTGCACTGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000174117.2 |
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| 3UTR-3UTR TCA 90 bp | AAGACGGTTGTTGTGCACGATGAAGGGGAGAGCGAGGGCAAGGGGCATGGAGAATTGTACCAAGCTGTCTaGATTTCTCAGCCTGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: KTVVVHDEGESEGKGHGELYQAV*ISQPGA Trigger: GGCTCCAGGCTGAGAAATTCAGACAGCTTGGTACAA...TTCTCCATGCCCCTTGCCCTCGCTCTCCCCTTCATCGTGCACAACAACCGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR-3UTR TCA 90 bp | AGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCTGAAGGCGAGTCTCAGTaGTCACGCCTTCTCACCGGA | + |
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Preference number: 2 (lower is better) Translates to: RAPDGAVFTLSSRAAALAEGESQ*SRLLTG Trigger: TCCGGTGAGAAGGCGTGATCACTGAGACTCGCCTTC...AGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR-3UTR GCA 90 bp | GGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGAGTCTCAGTGATCACGAAAGACGGTTGTTGTaGACGATGAAGGGGAGAGCG | + |
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Preference number: 2 (lower is better) Translates to: GSCFSLVLLQLKASLSDHERRLL*TMKGRA Trigger: CGCTCTCCCCTTCATCGTGCACAACAACCGTCTTTC...GTGATCACTGAGACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR CAA 90 bp | TGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCTTAGTTTaGCTTCAGCTGAAGGCGAGTCTCAGTGATCACGCCTTCTCACCG | + |
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Preference number: 2 (lower is better) Translates to: CSFHSKFQGSCFSLV*LQLKASLSDHAFSP Trigger: CGGTGAGAAGGCGTGATCACTGAGACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCTATGGAGAAGGAGCTGTaGACACTTTGTACCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: RAPDGAVFTLSSRAAALAMEKEL*TLCTKL Trigger: CAGCTTGGTACAAAGTGTCCACAGCTCCTTCTCCAT...AGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR-3UTR TCA 90 bp | ACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTTTTGACAACTCCTTGTaGATCAGACTGTGCAGACAA | + |
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Preference number: 2 (lower is better) Translates to: TQGTRWCSFHSKFQGSCFFDNSL*IRLCRQ Trigger: TTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAAA...AAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGT 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000174037.8 |
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| 3UTR CCA 72 bp | GTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTaGGGGAGCCTGGCTGACCACCTCTCCCGTGGACTG | + |
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Preference number: 3 (lower is better) Translates to: VSCLHKGRPLWP*GSLADHLSRGL Trigger: CAGTCCACGGGAGAGGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGAGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| 3UTR CCA 72 bp | GGACACAGGGCACAGAGCAGCACACAGGGCACCAGATaGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGC | + |
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Preference number: 3 (lower is better) Translates to: GHRAQSSTQGTR*CSFHSKFQGSC Trigger: GCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGCTGCTCTGTGCCCTGTGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR TCA 72 bp | GGAGAAGGAGCTGTGGACACTTTGTACCAAGCTGTCTaGATTTCTCAGCCTGGAGCCCCCTGGCTGCTGAGT | + |
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Preference number: 3 (lower is better) Translates to: GEGAVDTLYQAV*ISQPGAPWLLS Trigger: ACTCAGCAGCCAGGGGGCTCCAGGCTGAGAAATTCAGACAGCTTGGTACAAAGTGTCCACAGCTCCTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR GCA 72 bp | CACAGGGCACAGAGCAGCACACAGGGCACCAGATGGTaGAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: HRAQSSTQGTRW*SFHSKFQGSCF Trigger: AAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGCTGCTCTGTGCCCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| 3UTR CCA 72 bp | GGGAGAGCGAGGGCAAGGGGCATGGAGAAGGAGCTGTaGACACTTTGTACCAAGCTGTCTGAATTTCTCAGC | + |
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Preference number: 3 (lower is better) Translates to: GRARARGMEKEL*TLCTKLSEFLS Trigger: GCTGAGAAATTCAGACAGCTTGGTACAAAGTGTCCACAGCTCCTTCTCCATGCCCCTTGCCCTCGCTCTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| 3UTR GCA 72 bp | AGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTaGTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGAGT | + |
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Preference number: 3 (lower is better) Translates to: RWCSFHSKFQGS*FSLVLLQLKAS Trigger: ACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGGCCCCCAGCTGCAGCTaGCGTTGCTGGGTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: REGRVSCLHKGRPLWPWGAPSCS*RCWVSL Trigger: GAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGC...CCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCT 68% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR GCA 90 bp | TCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACGCCCCCAGCTGCAGCTaGCGTTGCTGGGTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: SCLHKGRPLWPWGSLADHAPSCS*RCWVSL Trigger: GAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGC...GTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CCA 90 bp | AGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGGAAGTTCTGGGCTCCTaGGTCTTGGCGGCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: REGRVSCLHKGRPLWPWGEVLGS*VLAACP Trigger: GGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTC...CCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCT 64% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CCA 90 bp | GTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACCTCTGAAGTTCTGGGCTCCTaGGTCTTGGCGGCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VYTRVGPFGPGGAWLTTSEVLGS*VLAACP Trigger: GGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTC...AGAGGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CCA 90 bp | AAGGGGAGAGCGAGGGCAAGGGGCATGGAGAAGGAGCTGTGGACACTTTGTACCAGGCCCCTTTGGCCCTaGGGGAGCCTGGCTGACCAC | + |
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Preference number: 4 (lower is better) Translates to: KGRARARGMEKELWTLCTRPLWP*GSLADH Trigger: GTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCT...GGTACAAAGTGTCCACAGCTCCTTCTCCATGCCCCTTGCCCTCGCTCTCCCCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR TCA 90 bp | AAGACGGTTGTTGTGCACGATGAAGGGGAGAGCGAGGGCAAGGGGCATGGAGAACTGGGGGAGCCTGGCTaGCCACCTCTCCCGTGGACT | + |
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Preference number: 4 (lower is better) Translates to: KTVVVHDEGESEGKGHGELGEPG*PPLPWT Trigger: AGTCCACGGGAGAGGTGGTCAGCCAGGCTCCCCCAG...TTCTCCATGCCCCTTGCCCTCGCTCTCCCCTTCATCGTGCACAACAACCGTCTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR CCA 90 bp | GCACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTGGCCCTGGGGGAGCCTaGCTGACCACCTCTCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: AHRAPDGAVFTLSSRAAAGPGGA*LTTSPV Trigger: CACGGGAGAGGTGGTCAGCCAGGCTCCCCCAGGGCC...AGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR GCA 90 bp | CCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACCAGAGCCTGCATCATCTaGAGCTGGCCAGAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: PVYTRVGPFGPGGAWLTTRACII*SWPEEE Trigger: TTCTTCCTCTGGCCAGCTGCAGATGATGCAGGCTCT...GGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR GCA 90 bp | AGGGAGGGGAGGGTCTCCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGAGCCTGCATCATCTaGAGCTGGCCAGAGGAAGAA | + |
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Preference number: 4 (lower is better) Translates to: REGRVSCLHKGRPLWPWGRACII*SWPEEE Trigger: TTCTTCCTCTGGCCAGCTGCAGATGATGCAGGCTCT...CCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGGAGACCCTCCCCTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR GCA 90 bp | CACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCCCCCAGCTGCAGCTaGCGTTGCTGGGTCTCCCTC | + |
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Preference number: 4 (lower is better) Translates to: HRAPDGAVFTLSSRAAALAPSCS*RCWVSL Trigger: GAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGC...TAAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR CCA 90 bp | CACAGGGCACAGAGCAGCACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGGAAGTTCTGGGCTCCTaGGTCTTGGCGGCTTGTCCC | + |
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Preference number: 4 (lower is better) Translates to: HRAQSSTQGTRWCSFHSKEVLGS*VLAACP Trigger: GGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTC...CTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGCTGCTCTGTGCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR CCA 90 bp | TTCCAGGGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGAGTCTCAGTTCTGCGAACCAGGCCTaGCCATGCTCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FQGSCFSLVLLQLKASLSSANQA*PCSSSS Trigger: GGAGCTGCTGGAGCATGGCCAGGCCTGGTTCGCAGA...ACTGAGACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR CCA 90 bp | ACAACTCCTTGTGAATCAGACTGTGCAGACAAGCATTCACCTTTTGAATCCGGGTCTGCGAACCAGGCCTaGCCATGCTCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: TTPCESDCADKHSPFESGSANQA*PCSSSS Trigger: GGAGCTGCTGGAGCATGGCCAGGCCTGGTTCGCAGA...CCCGGATTCAAAAGGTGAATGCTTGTCTGCACAGTCTGATTCACAAGGAGTTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR TCA 90 bp | AAGACGGTTGTTGTGCACGATGAAGGGGAGAGCGAGGGCAAGGGGCATGGAGAATCCTTTCCGATGCTTTaGCAACTCCTTGTGAATCAG | + |
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Preference number: 4 (lower is better) Translates to: KTVVVHDEGESEGKGHGESFPML*QLLVNQ Trigger: CTGATTCACAAGGAGTTGTCAAAGCATCGGAAAGGA...TTCTCCATGCCCCTTGCCCTCGCTCTCCCCTTCATCGTGCACAACAACCGTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR CCA 90 bp | TTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGTCTGCGAACCAGGCCTaGCCATGCTCCAGCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: FHSKFQGSCFSLVLLQLKSANQA*PCSSSS Trigger: GGAGCTGCTGGAGCATGGCCAGGCCTGGTTCGCAGA...CTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR GCA 90 bp | TTTAGCTTAGTTTTGCTTCAGCTGAAGGCGAGTCTCAGTGATCACGCCTTCTCATCCCTCTCCAGAGCCTaGATCATCTGCAGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSLVLLQLKASLSDHAFSSLSRA*IICSWP Trigger: TGGCCAGCTGCAGATGATGCAGGCTCTGGAGAGGGA...TGAGAAGGCGTGATCACTGAGACTCGCCTTCAGCTGAAGCAAAACTAAGCTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174037.8 |
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| CDS-3UTR CCA 90 bp | TTTCACTCTAAGTTCCAGGGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGCAGAGGAAGAAGTTCTaGGCTCCTGGGTCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: FHSKFQGSCFSLVLLQLKQRKKF*APGSWR Trigger: CCGCCAAGACCCAGGAGCCCAGAACTTCTTCCTCTG...CTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR GCA 90 bp | TTGACAACTCCTTGTGAATCAGACTGTGCAGACAAGCATTCACCTTTTGAATCCTCCCTCTCCAGAGCCTaGATCATCTGCAGCTGGCCA | + |
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Preference number: 4 (lower is better) Translates to: LTTPCESDCADKHSPFESSLSRA*IICSWP Trigger: TGGCCAGCTGCAGATGATGCAGGCTCTGGAGAGGGA...GGATTCAAAAGGTGAATGCTTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CCA 90 bp | GCTTTGACAACTCCTTGTGAATCAGACTGTGCAGACAAGCATTCACCTTTTGAACAGAGGAAGAAGTTCTaGGCTCCTGGGTCTTGGCGG | + |
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Preference number: 4 (lower is better) Translates to: ALTTPCESDCADKHSPFEQRKKF*APGSWR Trigger: CCGCCAAGACCCAGGAGCCCAGAACTTCTTCCTCTG...TTCAAAAGGTGAATGCTTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR TCA 90 bp | CACTCTAAGTTCCAGGGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGTTTGACAACTCCTTGTaGATCAGACTGTGCAGACAA | + |
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Preference number: 4 (lower is better) Translates to: HSKFQGSCFSLVLLQLKAFDNSL*IRLCRQ Trigger: TTGTCTGCACAGTCTGATTCACAAGGAGTTGTCAAA...CGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS GCA 90 bp | GGCCCCCAGCTGCAGCTGCCGTTGCTGGGTCTCCCTCAGCCGGTCTaGGAACCAGGCCTGGCCATGCTCCAGCAGCTCCAGGCCCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: GPQLQLPLLGLPQPV*EPGLAMLQQLQALP Trigger: TGGCAGGGCCTGGAGCTGCTGGAGCATGGCCAGGCCTGGTTCGCAGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CAA 90 bp | CCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACCCAGCTGCAGCTGCCGTaGCTGGGTCTCCCTCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: PVYTRVGPFGPGGAWLTTQLQLP*LGLPQP Trigger: CGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTG...GGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS GCA 90 bp | TGCAAGTCCATCAGAAAGTCCTCGCCAAGGGCCCCCAGCTGCAGCTaGCGTTGCTGGGTCTCCCTCAGCCGGTCTGCGAACCAGGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: CKSIRKSSPRAPSCS*RCWVSLSRSANQAW Trigger: CCAGGCCTGGTTCGCAGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGCCCTTGGCGAGGACTTTCTGATGGACTTGCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CAA 90 bp | TACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACCTCTCCCCTGGGTCTTGGCGGCTaGTCCCCAGTGGTAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: YTRVGPFGPGGAWLTTSPLGLGG*SPVVAA Trigger: TGCTGCTACCACTGGGGACAAGCCGCCAAGACCCAG...GGGAGAGGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CAA 90 bp | CCTGTCTACACAAGGGTAGGCCCCTTTGGCCCTGGGGGAGCCTGGCTGACCACCCTGGGTCTTGGCGGCTaGTCCCCAGTGGTAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PVYTRVGPFGPGGAWLTTLGLGG*SPVVAA Trigger: TGCTGCTACCACTGGGGACAAGCCGCCAAGACCCAG...GGTGGTCAGCCAGGCTCCCCCAGGGCCAAAGGGGCCTACCCTTGTGTAGACAGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCAGTGATCACGCCTTCTCACCGGATACACAGTGCAGGGAGGGGAGGGTCCAGCTGCAGCTGCCGTaGCTGGGTCTCCCTCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: SLSDHAFSPDTQCREGRVQLQLP*LGLPQP Trigger: CGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTG...GACCCTCCCCTCCCTGCACTGTGTATCCGGTGAGAAGGCGTGATCACTGAGACT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174037.8 |
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| CDS GCA 90 bp | TCTGAATGCAAGTCCATCAGAAAGTCCTCGCCAAGGGCCCCCAGCTaGAGCTGCCGTTGCTGGGTCTCCCTCAGCCGGTCTGCGAACCAG | + |
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Preference number: 5 (lower is better) Translates to: SECKSIRKSSPRAPS*SCRCWVSLSRSANQ Trigger: CTGGTTCGCAGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGCCCTTGGCGAGGACTTTCTGATGGACTTGCATTCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS GCA 90 bp | AGCTCCAGGCCCTGCCACAGAGCATCTTGTTCCCTCTCCAGAGCCTaGATCATCTGCAGCTGGCCAGAGGAAGAAGTTCTGGGCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SSRPCHRASCSLSRA*IICSWPEEEVLGSW Trigger: CCAGGAGCCCAGAACTTCTTCCTCTGGCCAGCTGCAGATGATGCAGGCTCTGGAGAGGGAACAAGATGCTCTGTGGCAGGGCCTGGAGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS CCA 90 bp | TCCCTCTCCAGAGCCTGCATCATCTGCAGCCAGAGGAAGAAGTTCTaGGCTCCTGGGTCTTGGCGGCTTGTCCCCAGTGGTAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SLSRACIICSQRKKF*APGSWRLVPSGSSR Trigger: TCTGCTGCTACCACTGGGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTCTTCCTCTGGCTGCAGATGATGCAGGCTCTGGAGAGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS CCA 90 bp | TCTCCAGAGCCTGCATCATCTGCAGCTGGCCAGAGGAAGAAGTTCTaGGCTCCTGGGTCTTGGCGGCTTGTCCCCAGTGGTAGCAGCAGA | + |
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Preference number: 5 (lower is better) Translates to: SPEPASSAAGQRKKF*APGSWRLVPSGSSR Trigger: TCTGCTGCTACCACTGGGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTCTTCCTCTGGCCAGCTGCAGATGATGCAGGCTCTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS GCA 90 bp | AGCTCCAGGCCCTGCCACAGAGCATCTTGTTCCCTCTCCAGAGCCTaGATCATCTGCAGCCAGAGGAAGAAGTTCTGGGCTCCTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SSRPCHRASCSLSRA*IICSQRKKFWAPGS Trigger: AGACCCAGGAGCCCAGAACTTCTTCCTCTGGCTGCAGATGATGCAGGCTCTGGAGAGGGAACAAGATGCTCTGTGGCAGGGCCTGGAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR CAA 90 bp | AGAAGGAGCTGTGGACACTTTGTACCAAGCTGTCTGAATTTCTCAGCCTGGAGCCAGCTGCAGCTGCCGTaGCTGGGTCTCCCTCAGCCG | + |
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Preference number: 5 (lower is better) Translates to: RRSCGHFVPSCLNFSAWSQLQLP*LGLPQP Trigger: CGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTG...GCTCCAGGCTGAGAAATTCAGACAGCTTGGTACAAAGTGTCCACAGCTCCTTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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| CDS-3UTR CAA 90 bp | ACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGTTCCAGGGCAGCTGCTTTCTGGGTCTTGGCGGCTaGTCCCCAGTGGTAGCAGCA | + |
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Preference number: 5 (lower is better) Translates to: TQGTRWCSFHSKFQGSCFLGLGG*SPVVAA Trigger: TGCTGCTACCACTGGGGACAAGCCGCCAAGACCCAG...AAAGCAGCTGCCCTGGAACTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR CAA 90 bp | CACAGGGCACAGAGCAGCACACAGGGCACCAGATGGTGCAGTTTTCACTCTAAGCTGCCACAGAGCATCTaGTTCCCTCTCCAGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: HRAQSSTQGTRWCSFHSKLPQSI*FPLQSL Trigger: CAGGCTCTGGAGAGGGAACAAGATGCTCTGTGGCAG...CTTAGAGTGAAAACTGCACCATCTGGTGCCCTGTGTGCTGCTCTGTGCCCTGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS-3UTR CAA 90 bp | CACTCTAAGTTCCAGGGCAGCTGCTTTAGCTTAGTTTTGCTTCAGCTGAAGGCGCTGCCACAGAGCATCTaGTTCCCTCTCCAGAGCCTG | + |
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Preference number: 5 (lower is better) Translates to: HSKFQGSCFSLVLLQLKALPQSI*FPLQSL Trigger: CAGGCTCTGGAGAGGGAACAAGATGCTCTGTGGCAG...CGCCTTCAGCTGAAGCAAAACTAAGCTAAAGCAGCTGCCCTGGAACTTAGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 |
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| CDS GCA 72 bp | CTGCAGCTGCCGTTGCTGGGTCTCCCTCAGCCGGTCTaGGAACCAGGCCTGGCCATGCTCCAGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: LQLPLLGLPQPV*EPGLAMLQQLQ Trigger: CTGGAGCTGCTGGAGCATGGCCAGGCCTGGTTCGCAGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS GCA 72 bp | ATCAGAAAGTCCTCGCCAAGGGCCCCCAGCTGCAGCTaGCGTTGCTGGGTCTCCCTCAGCCGGTCTGCGAAC | + |
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Preference number: 6 (lower is better) Translates to: IRKSSPRAPSCS*RCWVSLSRSAN Trigger: GTTCGCAGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGCCCTTGGCGAGGACTTTCTGAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS GCA 72 bp | AAGTCCATCAGAAAGTCCTCGCCAAGGGCCCCCAGCTaGAGCTGCCGTTGCTGGGTCTCCCTCAGCCGGTCT | + |
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Preference number: 6 (lower is better) Translates to: KSIRKSSPRAPS*SCRCWVSLSRS Trigger: AGACCGGCTGAGGGAGACCCAGCAACGGCAGCTGCAGCTGGGGGCCCTTGGCGAGGACTTTCTGATGGACTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040151.9 ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS CAA 90 bp | GGCCTGGCCATGCTCCAGCAGCTCCAGGCCCTGCCACAGAGCATCTaGTTCCCTCTCCAGAGCCTGCATCATCTGCAGCTGGCCAGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GLAMLQQLQALPQSI*FPLQSLHHLQLARG Trigger: TCCTCTGGCCAGCTGCAGATGATGCAGGCTCTGGAGAGGGAACAAGATGCTCTGTGGCAGGGCCTGGAGCTGCTGGAGCATGGCCAGGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000174037.8 ENSMUST00000174117.2 |
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| CDS CCA 72 bp | AGAGCCTGCATCATCTGCAGCCAGAGGAAGAAGTTCTaGGCTCCTGGGTCTTGGCGGCTTGTCCCCAGTGGT | + |
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Preference number: 6 (lower is better) Translates to: RACIICSQRKKF*APGSWRLVPSG Trigger: ACCACTGGGGACAAGCCGCCAAGACCCAGGAGCCCAGAACTTCTTCCTCTGGCTGCAGATGATGCAGGCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040151.9 |
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