Pregenerated sensors for SAP30L (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020519Ensembl transcript IDs: ENSMUST00000020826.6
Found 40 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTaGAGAGGCCACCTGTCATCAAGCAGTACCCGGCTGTCCTTTCAT | + |
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Preference number: 1 (lower is better) Translates to: TLFTVDMNSPYWLRC*RGHLSSSSTRLSFH Trigger: ATGAAAGGACAGCCGGGTACTGCTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| 3UTR CAA 90 bp | AACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTaGCAGAGGCCACCTGTCATCAAGCAGTACCCGGCTGTCCTTTCA | + |
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Preference number: 2 (lower is better) Translates to: NFIYSRYEQSLLAEM*QRPPVIKQYPAVLS Trigger: TGAAAGGACAGCCGGGTACTGCTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| 3UTR GCA 72 bp | ACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTaGAGAGGCCACCTGTCATCAAGCAGTACCCGGCTG | + |
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Preference number: 3 (lower is better) Translates to: TVDMNSPYWLRC*RGHLSSSSTRL Trigger: CAGCCGGGTACTGCTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| 3UTR CCA 72 bp | CAAACTTTATTTACAGTAGATATGAACAGTCCTTATTaGCTGAGATGTTGCAGAGGCCACCTGTCATCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QTLFTVDMNSPY*LRCCRGHLSSS Trigger: GCTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGTTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCAGCTCGCCGTCCGCGATaGGGCAGCAGCTCTGGCCGT | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPARRPR*GSSSGR Trigger: ACGGCCAGAGCTGCTGCCTCATCGCGGACGGCGAGC...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCTCTGCACCCTCTTGCTaGAGGAGGCGTTGCCCGCGG | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGSAPSC*RRRCPR Trigger: CCGCGGGCAACGCCTCCTTCAGCAAGAGGGTGCAGA...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| 3UTR CAA 72 bp | TACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTaGCAGAGGCCACCTGTCATCAAGCAGTACCCGGCT | + |
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Preference number: 4 (lower is better) Translates to: YSRYEQSLLAEM*QRPPVIKQYPA Trigger: AGCCGGGTACTGCTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCTAGCTGGGCCTTGTTaGAGCCTGGTCTGGTCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLAGPC*SLVWSA Trigger: TGCAGACCAGACCAGGCTTCAACAAGGCCCAGCTAG...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCTGCTTGCTGCCCTCTaGCTTCTGGTCCAGTCTGCT | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLLAAL*LLVQSA Trigger: AGCAGACTGGACCAGAAGTCAGAGGGCAGCAAGCAG...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCACGGAGCGTGTTCACCTaGAGCTGGAACAGATCAACC | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPRSVFT*SWNRST Trigger: GGTTGATCTGTTCCAGCTGCAGGTGAACACGCTCCG...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCACTCAAGCTGCTTGCTaGCCTCTGACTTCTGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGTQAAC*PLTSGP Trigger: TGGACCAGAAGTCAGAGGGCAGCAAGCAGCTTGAGT...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCAGTGTTCACCTGCAGCTaGAACAGATCAACCTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPVFTCS*NRSTSG Trigger: CCCTGAGGTTGATCTGTTCCAGCTGCAGGTGAACAC...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCACAGTCTCTGCTAGCTaGGCCTTGTTGAAGCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGTVSAS*ALLKPG Trigger: ACCAGGCTTCAACAAGGCCCAGCTAGCAGAGACTGT...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCACTGCCCTCTGACTTCTaGTCCAGTCTGCTCCTGTTA | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPLPSDF*SSLLLL Trigger: TAACAGGAGCAGACTGGACCAGAAGTCAGAGGGCAG...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCAGGCCTTGTTGAAGCCTaGTCTGGTCTGCAGCTTATA | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPGLVEA*SGLQLI Trigger: TATAAGCTGCAGACCAGACCAGGCTTCAACAAGGCC...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATGTCTATGTCCAGCTTaGGTTTCTTCTGCGAGATGC | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPCLCPA*VSSARC Trigger: GCATCTCGCAGAAGAAACTCAAGCTGGACATAGACA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATTCGGACGCTCTGGATaGAATTTTTGTGGAAGTCGC | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPFGRSG*NFCGSR Trigger: GCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR GCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCGTTTCTTCTGCGAGATaGTTTTCTGCACCCTCTTGC | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGVSSAR*FSAPSC Trigger: GCAAGAGGGTGCAGAAAAGCATCTCGCAGAAGAAAC...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCAAGCTTGAGTTTCTTCTaGGAGATGCTTTTCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPSLSFF*EMLFCT Trigger: GGTGCAGAAAAGCATCTCGCAGAAGAAACTCAAGCT...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR GCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATCCGCCATCGTCACTTaGCTTCCTCTTCCTTTTATT | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPSAIVT*LPLPFI Trigger: AATAAAAGGAAGAGGAAGGCAAGTGACGATGGCGGA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR TCA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATCTTCACCATGTAGATaGAATAGGCAAGCGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPSSPCR*NRQASL Trigger: AAGAGACGCTTGCCTATTTCATCTACATGGTGAAGA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| 3UTR CAA 72 bp | TCAAACTTTATTTACAGTAGATATGAACAGTCCTTATaGGCTGAGATGTTGCAGAGGCCACCTGTCATCAAG | + |
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Preference number: 4 (lower is better) Translates to: SNFIYSRYEQSL*AEMLQRPPVIK Trigger: CTTGATGACAGGTGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGTTTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CCA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCTTATTTCGGACGCTCTaGATGAAATTTTTGTGGAAG | + |
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Preference number: 4 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLFRTL*MKFLWK Trigger: CTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAA...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATTGCTGAAGGAGGCGTaGCCCGCGGGCCGGACGCAG | + |
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Preference number: 5 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPLLKEA*PAGRTQ Trigger: CTGCGTCCGGCCCGCGGGCAACGCCTCCTTCAGCAA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS GCA 90 bp | AGGGATGTCAGCATCGTGCTCGGGGGAGTCTCCGCCATCGTCACTTaGCTTCCTCTTCCTTTTATTTCGGACGCTCTGGATGAAATTTTT | + |
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Preference number: 5 (lower is better) Translates to: RDVSIVLGGVSAIVT*LPLPFISDALDEIF Trigger: AAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGCAAGTGACGATGGCGGAGACTCCCCCGAGCACGATGCTGACATCCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCACTTTTCTGCACCCTCTaGCTGAAGGAGGCGTTGCCC | + |
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Preference number: 5 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPLFCTL*LKEALP Trigger: GGGCAACGCCTCCTTCAGCAAGAGGGTGCAGAAAAG...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | TTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCATCTGCTAGCTGGGCCTaGTTGAAGCCTGGTCTGGTC | + |
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Preference number: 5 (lower is better) Translates to: FIYSRYEQSLLAEMLQRPSASWA*LKPGLV Trigger: GACCAGACCAGGCTTCAACAAGGCCCAGCTAGCAGA...TGGCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CCA 90 bp | GCCTTCCTCTTCCTTTTATTTCGGACGCTCTGGATGAAATTTTTGTaGAAGTCGCAGATATACAGGTGCCTTACGCTCTTGTCTATGTCC | + |
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Preference number: 5 (lower is better) Translates to: AFLFLLFRTLWMKFL*KSQIYRCLTLLSMS Trigger: GGACATAGACAAGAGCGTAAGGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCAGGTGCCTTACGCTCTaGTCTATGTCCAGCTTGAGT | + |
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Preference number: 5 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGRCLTL*SMSSLS Trigger: ACTCAAGCTGGACATAGACAAGAGCGTAAGGCACCT...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCTCCGCCATCGTCACTaGCCTTCCTCTTCCTTTTAT | + |
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Preference number: 5 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLRHRH*PSSSFY Trigger: ATAAAAGGAAGAGGAAGGCAAGTGACGATGGCGGAG...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCTTGTCTATGTCCAGCTaGAGTTTCTTCTGCGAGATG | + |
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Preference number: 5 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLSMSS*SFFCEM Trigger: CATCTCGCAGAAGAAACTCAAGCTGGACATAGACAA...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS-3UTR CAA 90 bp | ACTTTATTTACAGTAGATATGAACAGTCCTTATTGGCTGAGATGTTGCAGAGGCCTCTGGATGAAATTTTaGTGGAAGTCGCAGATATAC | + |
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Preference number: 5 (lower is better) Translates to: TLFTVDMNSPYWLRCCRGLWMKF*WKSQIY Trigger: GTATATCTGCGACTTCCACAAAAATTTCATCCAGAG...GCCTCTGCAACATCTCAGCCAATAAGGACTGTTCATATCTACTGTAAATAAAGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS GCA 72 bp | AGCTGGAACAGATCAACCTCAGGGATGTCAGCATCGTaGTCGGGGGAGTCTCCGCCATCGTCACTTGCCTTC | + |
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Preference number: 6 (lower is better) Translates to: SWNRSTSGMSAS*SGESPPSSLAF Trigger: GAAGGCAAGTGACGATGGCGGAGACTCCCCCGAGCACGATGCTGACATCCCTGAGGTTGATCTGTTCCAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CAA 72 bp | CAGCATCGTGCTCGGGGGAGTCTCCGCCATCGTCACTaGCCTTCCTCTTCCTTTTATTTCGGACGCTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: QHRARGSLRHRH*PSSSFYFGRSG Trigger: TCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGCAAGTGACGATGGCGGAGACTCCCCCGAGCACGATGCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS TCA 72 bp | AGTGTCGGCTCACAGTCTCTGCTAGCTGGGCCTTGTTaGAGCCTGGTCTGGTCTGCAGCTTATAGTGCCGTT | + |
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Preference number: 6 (lower is better) Translates to: SVGSQSLLAGPC*SLVWSAAYSAV Trigger: AACGGCACTATAAGCTGCAGACCAGACCAGGCTTCAACAAGGCCCAGCTAGCAGAGACTGTGAGCCGACACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CAA 90 bp | CTTGCCTTCCTCTTCCTTTTATTTCGGACGCTCTGGATGAAATTTTaGTGGAAGTCGCAGATATACAGGTGCCTTACGCTCTTGTCTATG | + |
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Preference number: 6 (lower is better) Translates to: LAFLFLLFRTLWMKF*WKSQIYRCLTLLSM Trigger: CATAGACAAGAGCGTAAGGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS TCA 72 bp | TTGCCTTCCTCTTCCTTTTATTTCGGACGCTCTGGATaGAATTTTTGTGGAAGTCGCAGATATACAGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LPSSSFYFGRSG*NFCGSRRYTGA Trigger: GGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGCAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CAA 72 bp | CTCTTCCTTTTATTTCGGACGCTCTGGATGAAATTTTaGTGGAAGTCGCAGATATACAGGTGCCTTACGCTC | + |
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Preference number: 6 (lower is better) Translates to: LFLLFRTLWMKF*WKSQIYRCLTL Trigger: GAGCGTAAGGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CCA 72 bp | TTCCTTTTATTTCGGACGCTCTGGATGAAATTTTTGTaGAAGTCGCAGATATACAGGTGCCTTACGCTCTTG | + |
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Preference number: 6 (lower is better) Translates to: FLLFRTLWMKFL*KSQIYRCLTLL Trigger: CAAGAGCGTAAGGCACCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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| CDS CCA 72 bp | TCACTTGCCTTCCTCTTCCTTTTATTTCGGACGCTCTaGATGAAATTTTTGTGGAAGTCGCAGATATACAGG | + |
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Preference number: 6 (lower is better) Translates to: SLAFLFLLFRTL*MKFLWKSQIYR Trigger: CCTGTATATCTGCGACTTCCACAAAAATTTCATCCAGAGCGTCCGAAATAAAAGGAAGAGGAAGGCAAGTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000020826.6 |
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