Pregenerated sensors for SAP30 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000031609

Ensembl transcript IDs: ENSMUST00000034022.4

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	GAGTTGCCCAGGGCCGGGACCGGCCGCTCCAGGTGGCCCAGAAGCTaGCACTGCACCGGCACCGGGTACCTCTGCCCCACCGCCGGCTGC	+
Preference number: 5 (lower is better) Translates to: ELPRAGTGRSRWPRS*HCTGTGYLCPTAGC Trigger: GCAGCCGGCGGTGGGGCAGAGGTACCCGGTGCCGGTGCAGTGTCAGCTTCTGGGCCACCTGGAGCGGCCGGTCCCGGCCCTGGGCAACTC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034022.4
CDS GCA 72 bp	TGCACCGGCACCGGGTACCTCTGCCCCACCGCCGGCTaGGTTCCCATTCCCCGCCGAGGCGGCGGCAGCCGC	+
Preference number: 6 (lower is better) Translates to: CTGTGYLCPTAG*VPIPRRGGGSR Trigger: GCGGCTGCCGCCGCCTCGGCGGGGAATGGGAACGCAGCCGGCGGTGGGGCAGAGGTACCCGGTGCCGGTGCA 78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000034022.4
CDS TCA 72 bp	AGGGCCGGGACCGGCCGCTCCAGGTGGCCCAGAAGCTaGCACTGCACCGGCACCGGGTACCTCTGCCCCACC	+
Preference number: 6 (lower is better) Translates to: RAGTGRSRWPRS*HCTGTGYLCPT Trigger: GGTGGGGCAGAGGTACCCGGTGCCGGTGCAGTGTCAGCTTCTGGGCCACCTGGAGCGGCCGGTCCCGGCCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000034022.4

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